Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003368.1

Orthogroup ID

OG0000292

Physical Location & Seq

Genomic Coordinates Forward (+)

239207 .. 249909

Gene Structure 10703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003368.1_g000047.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

atgaacaactacatgctgttgatccatcggcttctggttcattctctcctgctactttgctttgcaaccttggctttcggagctaatcgattatcagccgatgaagtacaagctttgaaggacatagcaaaaacactggggaagacaaactggaattttagtgctgatccatgcagcggagaatatggatggattactcaagccgacaaatattttgcgaataacgtcacctgcggcaattgttcgacttccgatgcggccaatgacaccagaactgatcagatctgccatgttgttagcatacttctgaaagctcagaatttgccaggaacacttccgtcagagttggcaaggcttccctatctccaacaaattgacctggcccgtaactatctgaatggaaccatccctcctcaatggggctccctgccactagttaacatttctcttgttggaaaccgcttgacaggttctatccccgttgagcttgcaaatattaccaccctgaaaagtttgaccatggatttcaattatttctctggaggtcttccttggcaacttggaaattttcccagcatagaaacactgagaattactgacttgaatggacctgaatcatcctttcctgtacttgagaatttgaaaaaattgaagacactgatgttgaggagttgcaatattaatggacagctaccagaatatttctcggacatgacagatttgacaactttagacctcagcttcaacaagctaactggaaaagtcccaagcagcttatttgttgctccaaataatttggattacatattcttaactggaaatttgctgaatggatccaagcctctgtggattcagggagacaatgctgatctttcatataacaatttcaccccagagcctgtagattgtaagcaagctggcaggaacttgtttgcaagctcttcaaagggcaacaattcagctgtttcgtgtttgagcaataaaactacaacatgttcaaaaagttggtactctctcaatataaattgtggaggaagtggagtaacagttgatggaagagcatatgatgaggatacagatgcaagtggaccttcattatattacgagagcagcacaaattgggtgtcaagcagcactggttacttcactgatgatgacagttctacagaccactttacttggtctaattcatctagactcttgattgccaatgctcaactatacatgactgcacgcctttctcccatctctctaacttattatggattttgtctgggaaatggaaactacacagtacacctccattttgcagagataatgtttacaaatggtccaacatatagcagcttaggaaggcgcatatttgatgtttacattcagggcaaacgagtgctgcaggatttcaatattgctgatgaggcaggtggggttggtaaggcagtcataaaaaactatactattgctgtaactactaataccttggagatccgtttcttttgggctgggaaaggaaccacaggtatccctgtaagaggagtttatggtcctcttatctccgccatatctgtatttccagactttgaacccccaccagaaaccctgtcaggaccaacaacatcatggagtttctctataggtgcagtggttggatttatggctgtagggggagtattctttgtattgctgattttgggttatctttggtggagaggctatctaagacgagaaaggactttggagcaagatttaaaaggtgttgacctgcaaacgggtagatttagcttgagacaaatcaaagatgccacagaaaactttgacatagccaacaagattggagaaggtggttttggtcctgtttacaagggccaactatcagatggcaccataattgctgttaagcagctttctgccaaatcacagcaaggaaatcgtgagtttgtgaatgagattggcatgatttccgctctgcaacaccctcatcttgtcaagctctatggatgctccattgaaggaaatcagttgttgcttgtctatgagtacatggaaaacaacagtgttggacgcactttgtttggtgcaaaagaaagtcagttgaagttagattggccaacaaggcacaggatttgtgttggtgttgcaaaaggtttggcttaccttcatgaagaatcacggttgaagatcgttcatagagacatcaaagctactaatgtgctgcttgataaaaatctttgcccgaagatatctgactttggcctagccaagcttggtgaagatgatagtacccatataagcactaggattgctggaacttatggatatatggcacctgaatatgcaatgcggggttatctaactgataaagcggatgtgtatagttttggaattcttgtattggaaatggtcagtggaaggcgcaacacaacttaccattccaagggagagtgcttctacattcttgattgggcacttcttctgaaagagaaaggaagtttgctagacctagtcgatccaaggttgggatcagattttaacaaagaagacgtgatgattaccatcaaggtggctctcctttgctgttatgtctctgcagcacttaggcctgccatgtcttcagtggtaagcatgcttgaaggcagggctcgtgttgaggagttagtctttgattcaagtgcctcatttcatgagatcagtgaaatgaggaaacattttgaatctaattactcattggagaccatcgatgagagtactcagagacaaacaatgtcaatcgaaggggcgtgcacttcatctaaatctgttcaagatctctatccaatcaatcctgattcagattactgggagaacagagattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0002682 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009814 GO:0009861 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0031347 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

950

Amino Acids

105.11

Weight (kDa)

5.66

Isoelectric Point (pI)

32.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53420 AT3G14840
fragaria_vesca	FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica	MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica	Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis	pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis	RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata	RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora	Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii	Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa	Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha	Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana	Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	239, 1412
Acc36I	ACCTGC	3 cut(s)	239, 1412, 1770
AccB1I	GGYRCC	2 cut(s)	1880, 2323
AccBSI	CCGCTC	1 cut(s)	1964
AciI	CCGC	8 cut(s)	177, 234, 257, 460, 1557, 1962, 2341, 2363
AclWI	GGATC	7 cut(s)	16, 161, 828, 841, 1480, 2501, 2527
AcoI	YGGCCR	2 cut(s)	258, 2105
AcsI	RAATTY	6 cut(s)	154, 319, 565, 637, 820, 2382
AcuI	CTGAAG	1 cut(s)	2595
AfaI	GTAC	7 cut(s)	108, 630, 1010, 1296, 2039, 2281, 2746
AfiI	CCNNNNNNNGG	6 cut(s)	176, 419, 1532, 1768, 2434, 2516
AflIII	ACRYGT	1 cut(s)	992
AhlI	ACTAGT	1 cut(s)	433
AjiI	CACGTC	1 cut(s)	2542
AjnI	CCWGG	2 cut(s)	325, 378
AjuI	GAANNNNNNNTTGG	2 cut(s)	1830, 1862
AloI	GAACNNNNNNTCC	2 cut(s)	394, 426
Alw21I	GWGCWC	1 cut(s)	2783
Alw26I	GTCTC	6 cut(s)	852, 1780, 2184, 2587, 2723, 2746
Alw44I	GTGCAC	1 cut(s)	2779
AlwI	GGATC	7 cut(s)	16, 161, 828, 841, 1480, 2501, 2527
AlwNI	CAGNNNCTG	1 cut(s)	899
AoxI	GGCC	6 cut(s)	258, 381, 1864, 2105, 2251, 2597
ApaLI	GTGCAC	1 cut(s)	2779
ApeKI	GCWGC	9 cut(s)	174, 771, 1110, 1131, 1344, 1393, 1900, 2212, 2588
ApoI	RAATTY	6 cut(s)	154, 319, 565, 637, 820, 2382
ArsI	GACNNNNNNTTYG	4 cut(s)	197, 229, 1109, 1141
AseI	ATTAAT	1 cut(s)	681
AspLEI	GCGC	2 cut(s)	1359, 2415
AspS9I	GGNCC	8 cut(s)	382, 608, 1088, 1331, 1544, 1607, 1850, 1864
AsuHPI	GGTGA	3 cut(s)	220, 880, 2279
AvaII	GGWCC	6 cut(s)	608, 1088, 1331, 1544, 1607, 1850
BaeGI	GKGCMC	2 cut(s)	2467, 2783
BalI	TGGCCA	1 cut(s)	2107
BamHI	GGATCC	1 cut(s)	833
BanI	GGYRCC	2 cut(s)	1880, 2323
BanII	GRGCYC	2 cut(s)	425, 2641
BauI	CACGAG	1 cut(s)	2640
BbsI	GAAGAC	5 cut(s)	149, 539, 659, 2544, 2601
Bbv12I	GWGCWC	1 cut(s)	2783
BbvCI	CCTCAGC	1 cut(s)	737
BbvI	GCAGC	9 cut(s)	186, 783, 1122, 1143, 1356, 1380, 1912, 2199, 2600
BccI	CCATC	8 cut(s)	33, 183, 413, 1046, 1253, 1871, 2561, 2741
BcgI	CGANNNNNNTGC	2 cut(s)	1910, 1944
BciT130I	CCWGG	2 cut(s)	327, 380
BciVI	GTATCC	2 cut(s)	1066, 1532
BclI	TGATCA	1 cut(s)	277
BcoDI	GTCTC	6 cut(s)	852, 1780, 2184, 2587, 2723, 2746
BcuI	ACTAGT	1 cut(s)	433
BfaI	CTAG	6 cut(s)	434, 1194, 2255, 2295, 2495, 2501
BfmI	CTRYAG	6 cut(s)	900, 1164, 1394, 1632, 1659, 2586
BfuAI	ACCTGC	3 cut(s)	239, 1412, 1770
BfuI	GTATCC	2 cut(s)	1066, 1532
BglI	GCCNNNNNGGC	1 cut(s)	2113
BglII	AGATCT	2 cut(s)	282, 2803
BmcAI	AGTACT	1 cut(s)	2746
Bme1390I	CCNGG	2 cut(s)	327, 380
Bme18I	GGWCC	6 cut(s)	608, 1088, 1331, 1544, 1607, 1850
BmgBI	CACGTC	1 cut(s)	2542
BmgT120I	GGNCC	8 cut(s)	382, 608, 1088, 1331, 1544, 1607, 1850, 1864
BmiI	GGNNCC	6 cut(s)	403, 424, 835, 1513, 1882, 2325
BmrFI	CCNGG	2 cut(s)	327, 380
BmrI	ACTGGG	2 cut(s)	146, 2845
BmsI	GCATC	4 cut(s)	244, 1069, 1789, 1988
BmuI	ACTGGG	2 cut(s)	146, 2845
BpiI	GAAGAC	5 cut(s)	149, 539, 659, 2544, 2601
BpmI	CTGGAG	1 cut(s)	561
Bpu10I	CCTNAGC	2 cut(s)	737, 1348
BpuEI	CTTGAG	3 cut(s)	183, 653, 1804
Bsa29I	ATCGAT	2 cut(s)	88, 2736
BsaBI	GATNNNNATC	3 cut(s)	2223, 2552, 2808
BsaI	GGTCTC	1 cut(s)	2723
BsaJI	CCNNGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
BsaXI	ACNNNNNCTCC	4 cut(s)	394, 424, 1032, 1062
Bsc4I	CCNNNNNNNGG	6 cut(s)	176, 419, 1532, 1768, 2434, 2516
Bse1I	ACTGG	6 cut(s)	141, 155, 760, 820, 1141, 2840
Bse3DI	GCAATG	1 cut(s)	2343
Bse8I	GATNNNNATC	3 cut(s)	2223, 2552, 2808
BseBI	CCWGG	2 cut(s)	327, 380
BseCI	ATCGAT	2 cut(s)	88, 2736
BseDI	CCNNGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
BseGI	GGATG	5 cut(s)	194, 405, 617, 2003, 2371
BseJI	GATNNNNATC	3 cut(s)	2223, 2552, 2808
BseLI	CCNNNNNNNGG	6 cut(s)	176, 419, 1532, 1768, 2434, 2516
BseMI	GCAATG	1 cut(s)	2343
BseMII	CTCAG	4 cut(s)	329, 578, 751, 2762
BseNI	ACTGG	6 cut(s)	141, 155, 760, 820, 1141, 2840
BseRI	GAGGAG	4 cut(s)	402, 682, 1548, 2663
BseSI	GKGCMC	2 cut(s)	2467, 2783
BseXI	GCAGC	9 cut(s)	186, 783, 1122, 1143, 1356, 1380, 1912, 2199, 2600
BseYI	CCCAGC	2 cut(s)	572, 1502
BsgI	GTGCAG	2 cut(s)	1215, 1659
BshFI	GGCC	6 cut(s)	260, 383, 1866, 2107, 2253, 2599
BshNI	GGYRCC	2 cut(s)	1880, 2323
BshVI	ATCGAT	2 cut(s)	88, 2736
BsiHKAI	GWGCWC	1 cut(s)	2783
BslFI	GGGAC	1 cut(s)	749
BslI	CCNNNNNNNGG	6 cut(s)	176, 419, 1532, 1768, 2434, 2516
BsmAI	GTCTC	6 cut(s)	852, 1780, 2184, 2587, 2723, 2746
BsmFI	GGGAC	1 cut(s)	749
BsnI	GGCC	6 cut(s)	260, 383, 1866, 2107, 2253, 2599
Bso31I	GGTCTC	1 cut(s)	2723
Bsp1286I	GDGCHC	4 cut(s)	425, 2467, 2641, 2783
Bsp19I	CCATGG	1 cut(s)	519
BspACI	CCGC	8 cut(s)	177, 234, 257, 460, 1557, 1962, 2341, 2363
BspANI	GGCC	6 cut(s)	260, 383, 1866, 2107, 2253, 2599
BspCNI	CTCAG	4 cut(s)	328, 579, 750, 2761
BspDI	ATCGAT	2 cut(s)	88, 2736
BspHI	TCATGA	2 cut(s)	2158, 2680
BspLI	GGNNCC	6 cut(s)	403, 424, 835, 1513, 1882, 2325
BspMAI	CTGCAG	2 cut(s)	1398, 2590
BspMI	ACCTGC	3 cut(s)	239, 1412, 1770
BspPI	GGATC	7 cut(s)	16, 161, 828, 841, 1480, 2501, 2527
BspQI	GCTCTTC	2 cut(s)	946, 1051
BspT107I	GGYRCC	2 cut(s)	1880, 2323
BspTNI	GGTCTC	1 cut(s)	2723
BsrBI	CCGCTC	1 cut(s)	1964
BsrDI	GCAATG	1 cut(s)	2343
BsrI	ACTGG	6 cut(s)	141, 155, 760, 820, 1141, 2840
BssECI	CCNNGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
BssSI	CACGAG	1 cut(s)	2640
BssT1I	CCWWGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
Bst2BI	CACGAG	1 cut(s)	2640
Bst2UI	CCWGG	2 cut(s)	327, 380
Bst4CI	ACNGT	5 cut(s)	1048, 1160, 1294, 2054, 2172
Bst6I	CTCTTC	2 cut(s)	946, 1051
BstC8I	GCNNGC	8 cut(s)	489, 915, 919, 937, 1234, 2601, 2624, 2779
BstDEI	CTNAG	7 cut(s)	315, 587, 737, 1348, 1718, 2594, 2748
BstDSI	CCRYGG	1 cut(s)	519
BstENI	CCTNNNNNAGG	1 cut(s)	1530
BstF5I	GGATG	5 cut(s)	194, 405, 617, 2003, 2371
BstHHI	GCGC	2 cut(s)	1359, 2415
BstMAI	GTCTC	6 cut(s)	852, 1780, 2184, 2587, 2723, 2746
BstMWI	GCNNNNNNNGC	4 cut(s)	71, 80, 1418, 2113
BstNI	CCWGG	2 cut(s)	327, 380
BstNSI	RCATGY	3 cut(s)	16, 996, 2626
BstSCI	CCNGG	2 cut(s)	325, 378
BstSFI	CTRYAG	6 cut(s)	900, 1164, 1394, 1632, 1659, 2586
BstSLI	GKGCMC	2 cut(s)	2467, 2783
BstV1I	GCAGC	9 cut(s)	186, 783, 1122, 1143, 1356, 1380, 1912, 2199, 2600
BstV2I	GAAGAC	5 cut(s)	149, 539, 659, 2544, 2601
BstX2I	RGATCY	4 cut(s)	282, 833, 1485, 2803
BstXI	CCANNNNNNTGG	1 cut(s)	2560
BstYI	RGATCY	4 cut(s)	282, 833, 1485, 2803
Bsu15I	ATCGAT	2 cut(s)	88, 2736
BsuI	GTATCC	2 cut(s)	1066, 1532
BsuRI	GGCC	6 cut(s)	260, 383, 1866, 2107, 2253, 2599
BsuTUI	ATCGAT	2 cut(s)	88, 2736
BtgI	CCRYGG	1 cut(s)	519
BtrI	CACGTC	1 cut(s)	2542
BtsCI	GGATG	5 cut(s)	194, 405, 617, 2003, 2371
BtsI	GCAGTG	1 cut(s)	1647
BveI	ACCTGC	3 cut(s)	239, 1412, 1770
Cac8I	GCNNGC	8 cut(s)	489, 915, 919, 937, 1234, 2601, 2624, 2779
CaiI	CAGNNNCTG	1 cut(s)	899
CciI	TCATGA	2 cut(s)	2158, 2680
CfoI	GCGC	2 cut(s)	1359, 2415
Cfr13I	GGNCC	8 cut(s)	382, 608, 1088, 1331, 1544, 1607, 1850, 1864
ClaI	ATCGAT	2 cut(s)	88, 2736
CseI	GACGC	1 cut(s)	2070
Csp6I	GTAC	7 cut(s)	107, 629, 1009, 1295, 2038, 2280, 2745
CspCI	CAANNNNNGTGG	2 cut(s)	1160, 1195
CviQI	GTAC	7 cut(s)	107, 629, 1009, 1295, 2038, 2280, 2745
DdeI	CTNAG	7 cut(s)	315, 587, 737, 1348, 1718, 2594, 2748
DraI	TTTAAA	1 cut(s)	1749
EaeI	YGGCCR	2 cut(s)	258, 2105
Eam1104I	CTCTTC	2 cut(s)	946, 1051
EarI	CTCTTC	2 cut(s)	946, 1051
EciI	GGCGGA	1 cut(s)	1546
Eco130I	CCWWGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
Eco147I	AGGCCT	1 cut(s)	2599
Eco24I	GRGCYC	2 cut(s)	425, 2641
Eco31I	GGTCTC	1 cut(s)	2723
Eco32I	GATATC	1 cut(s)	2241
Eco47I	GGWCC	6 cut(s)	608, 1088, 1331, 1544, 1607, 1850
Eco57I	CTGAAG	1 cut(s)	2595
EcoNI	CCTNNNNNAGG	1 cut(s)	1530
EcoRI	GAATTC	1 cut(s)	2382
EcoRII	CCWGG	2 cut(s)	325, 378
EcoRV	GATATC	1 cut(s)	2241
EcoT14I	CCWWGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
EcoT38I	GRGCYC	2 cut(s)	425, 2641
ErhI	CCWWGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
FalI	AAGNNNNNCTT	2 cut(s)	1075, 1107
FaqI	GGGAC	1 cut(s)	749
FauI	CCCGC	1 cut(s)	2334
FauNDI	CATATG	1 cut(s)	1063
FbaI	TGATCA	1 cut(s)	277
FokI	GGATG	5 cut(s)	201, 392, 604, 2010, 2378
FriOI	GRGCYC	2 cut(s)	425, 2641
FspBI	CTAG	6 cut(s)	434, 1194, 2255, 2295, 2495, 2501
GlaI	GCGC	2 cut(s)	1358, 2414
GsaI	CCCAGC	2 cut(s)	576, 1506
GsuI	CTGGAG	1 cut(s)	561
HaeIII	GGCC	6 cut(s)	260, 383, 1866, 2107, 2253, 2599
HgaI	GACGC	1 cut(s)	2070
HhaI	GCGC	2 cut(s)	1359, 2415
Hin6I	GCGC	2 cut(s)	1357, 2413
HinP1I	GCGC	2 cut(s)	1357, 2413
HincII	GTYRAC	2 cut(s)	439, 1759
HindII	GTYRAC	2 cut(s)	439, 1759
HindIII	AAGCTT	2 cut(s)	111, 2261
HinfI	GANTC	7 cut(s)	614, 850, 1197, 2165, 2663, 2711, 2825
HpaI	GTTAAC	1 cut(s)	439
HphI	GGTGA	3 cut(s)	220, 880, 2279
Hpy166II	GTNNAC	8 cut(s)	439, 1088, 1297, 1323, 1372, 1759, 1858, 2781
Hpy8I	GTNNAC	8 cut(s)	439, 1088, 1297, 1323, 1372, 1759, 1858, 2781
HpyAV	CCTTC	9 cut(s)	112, 1101, 1347, 1832, 2003, 2165, 2403, 2624, 2765
HpyCH4III	ACNGT	5 cut(s)	1048, 1160, 1294, 2054, 2172
HpyCH4IV	ACGT	2 cut(s)	225, 2541
HpyF10VI	GCNNNNNNNGC	4 cut(s)	71, 80, 1418, 2113
HpyF3I	CTNAG	7 cut(s)	315, 587, 737, 1348, 1718, 2594, 2748
HpySE526I	ACGT	2 cut(s)	225, 2541
HspAI	GCGC	2 cut(s)	1357, 2413
Ksp22I	TGATCA	1 cut(s)	277
KspAI	GTTAAC	1 cut(s)	439
LguI	GCTCTTC	2 cut(s)	946, 1051
LmnI	GCTCC	5 cut(s)	80, 428, 790, 1738, 2006
Lsp1109I	GCAGC	9 cut(s)	186, 783, 1122, 1143, 1356, 1380, 1912, 2199, 2600
LweI	GCATC	4 cut(s)	244, 1069, 1789, 1988
MaeI	CTAG	6 cut(s)	434, 1194, 2255, 2295, 2495, 2501
MaeII	ACGT	2 cut(s)	225, 2541
MaeIII	GTNAC	5 cut(s)	226, 386, 1042, 1139, 1465
MbiI	CCGCTC	1 cut(s)	1964
MfeI	CAATTG	1 cut(s)	238
MflI	RGATCY	4 cut(s)	282, 833, 1485, 2803
MhlI	GDGCHC	4 cut(s)	425, 2467, 2641, 2783
MlsI	TGGCCA	1 cut(s)	2107
MluNI	TGGCCA	1 cut(s)	2107
MlyI	GAGTC	1 cut(s)	1191
MmeI	TCCRAC	5 cut(s)	391, 433, 1358, 1627, 2038
Mox20I	TGGCCA	1 cut(s)	2107
MscI	TGGCCA	1 cut(s)	2107
MseI	TTAA	7 cut(s)	438, 681, 812, 1748, 1896, 2529, 2851
MslI	CAYNNNNRTG	1 cut(s)	2558
Msp20I	TGGCCA	1 cut(s)	2107
MspA1I	CMGCKG	2 cut(s)	177, 962
MspR9I	CCNGG	2 cut(s)	327, 380
MunI	CAATTG	1 cut(s)	238
MvaI	CCWGG	2 cut(s)	327, 380
MwoI	GCNNNNNNNGC	4 cut(s)	71, 80, 1418, 2113
NcoI	CCATGG	1 cut(s)	519
NdeI	CATATG	1 cut(s)	1063
NlaIV	GGNNCC	6 cut(s)	403, 424, 835, 1513, 1882, 2325
NmuCI	GTSAC	1 cut(s)	226
NspI	RCATGY	3 cut(s)	16, 996, 2626
PaeI	GCATGC	1 cut(s)	2626
PagI	TCATGA	2 cut(s)	2158, 2680
PaqCI	CACCTGC	2 cut(s)	239, 1412
PceI	AGGCCT	1 cut(s)	2599
PciI	ACATGT	1 cut(s)	992
PciSI	GCTCTTC	2 cut(s)	946, 1051
PfeI	GAWTC	6 cut(s)	614, 850, 2165, 2663, 2711, 2825
PflFI	GACNNNGTC	1 cut(s)	2501
PleI	GAGTC	1 cut(s)	1191
PpsI	GAGTC	1 cut(s)	1191
PscI	ACATGT	1 cut(s)	992
PshBI	ATTAAT	1 cut(s)	681
Psp6I	CCWGG	2 cut(s)	325, 378
PspFI	CCCAGC	2 cut(s)	572, 1502
PspGI	CCWGG	2 cut(s)	325, 378
PspN4I	GGNNCC	6 cut(s)	403, 424, 835, 1513, 1882, 2325
PspPI	GGNCC	8 cut(s)	382, 608, 1088, 1331, 1544, 1607, 1850, 1864
PstI	CTGCAG	2 cut(s)	1398, 2590
PstNI	CAGNNNCTG	1 cut(s)	899
PsuI	RGATCY	4 cut(s)	282, 833, 1485, 2803
PsyI	GACNNNGTC	1 cut(s)	2501
PvuII	CAGCTG	1 cut(s)	962
RsaI	GTAC	7 cut(s)	108, 630, 1010, 1296, 2039, 2281, 2746
RsaNI	GTAC	7 cut(s)	107, 629, 1009, 1295, 2038, 2280, 2745
RseI	CAYNNNNRTG	1 cut(s)	2558
SapI	GCTCTTC	2 cut(s)	946, 1051
SaqAI	TTAA	7 cut(s)	438, 681, 812, 1748, 1896, 2529, 2851
Sau96I	GGNCC	8 cut(s)	382, 608, 1088, 1331, 1544, 1607, 1850, 1864
ScaI	AGTACT	1 cut(s)	2746
SchI	GAGTC	1 cut(s)	1191
ScrFI	CCNGG	2 cut(s)	327, 380
SduI	GDGCHC	4 cut(s)	425, 2467, 2641, 2783
SfaNI	GCATC	4 cut(s)	244, 1069, 1789, 1988
SfcI	CTRYAG	6 cut(s)	900, 1164, 1394, 1632, 1659, 2586
SinI	GGWCC	6 cut(s)	608, 1088, 1331, 1544, 1607, 1850
SmiMI	CAYNNNNRTG	1 cut(s)	2558
SmlI	CTYRAG	3 cut(s)	198, 632, 1783
SmoI	CTYRAG	3 cut(s)	198, 632, 1783
SpeI	ACTAGT	1 cut(s)	433
SphI	GCATGC	1 cut(s)	2626
SseBI	AGGCCT	1 cut(s)	2599
SsiI	CCGC	8 cut(s)	177, 234, 257, 460, 1557, 1962, 2341, 2363
SspI	AATATT	5 cut(s)	212, 496, 679, 701, 1408
SspMI	CTAG	6 cut(s)	434, 1194, 2255, 2295, 2495, 2501
StuI	AGGCCT	1 cut(s)	2599
StyD4I	CCNGG	2 cut(s)	325, 378
StyI	CCWWGG	6 cut(s)	69, 519, 551, 1479, 2433, 2510
TaaI	ACNGT	5 cut(s)	1048, 1160, 1294, 2054, 2172
TaiI	ACGT	2 cut(s)	228, 2544
TaqI	TCGA	5 cut(s)	88, 245, 2505, 2736, 2769
TatI	WGTACW	5 cut(s)	106, 628, 1294, 2037, 2744
TauI	GCSGC	2 cut(s)	237, 260
TfiI	GAWTC	6 cut(s)	614, 850, 2165, 2663, 2711, 2825
Tru1I	TTAA	7 cut(s)	438, 681, 812, 1748, 1896, 2529, 2851
Tru9I	TTAA	7 cut(s)	438, 681, 812, 1748, 1896, 2529, 2851
TseFI	GTSAC	1 cut(s)	226
TseI	GCWGC	9 cut(s)	174, 771, 1110, 1131, 1344, 1393, 1900, 2212, 2588
Tsp45I	GTSAC	1 cut(s)	226
TspGWI	ACGGA	2 cut(s)	327, 1478
Tth111I	GACNNNGTC	1 cut(s)	2501
VneI	GTGCAC	1 cut(s)	2779
VpaK11BI	GGWCC	6 cut(s)	608, 1088, 1331, 1544, 1607, 1850
VspI	ATTAAT	1 cut(s)	681
XagI	CCTNNNNNAGG	1 cut(s)	1530
XapI	RAATTY	6 cut(s)	154, 319, 565, 637, 820, 2382
XbaI	TCTAGA	1 cut(s)	1193
XceI	RCATGY	3 cut(s)	16, 996, 2626
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1617, 1874, 2611
XspI	CTAG	6 cut(s)	434, 1194, 2255, 2295, 2495, 2501
ZrmI	AGTACT	1 cut(s)	2746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.