Rw5G019000

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
24687138 .. 24696688
9551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G019000.1

Sequence Viewer

Length: 3075 bp
ATGAAAATGAATTACACATTCTTCTTCCCTCGGCTTCTTCGTGCTCTGTCTCTCCTGCTAGTTTGCTCTGCAACTTTTGCTTTCGGAGCCACTCGATTACCAGAAGATGAAGTTGAAGCTTTGAAGGACATAGCAAAGACGCTGGGGAAGACGAACTGGAATTTCAGCGCTGATCCCTGTGGCAACGATTACGGGTGGGCTAATCTGAACCCGGTAAAAGGATCGGAAGATGCCGTCACCTGCAATTGTACCTTAGTTCCCAATTCCACTGTCTGCCACGTCACCAGTATAGTATTGAAATCTCAGAATTTGCTGGGAAAACTCCCGCCAGAGTTGATCAGGCTCCCCTATCTTCAAGAAATTGACCTCACCCGCAACTATCTGAATGGTACCATCCCTCCAGAATGGGGTGCCCTGCCACTACTTAACATTTCCCTTGTTGGAAACCGTTTGACAGGTTCTCTACCTGTTGAGCTTGCAAACATCACCACCCTGAAAAGTTTGGCCATCGATTTCAATAGCTTCTCTGGAGTTCTTCCTGTGAAGCTTGGGAACTTGCCCAACATAGAAAGAATGCTTCTTACCTCAAACAACTTTACTGGGGAGTTGCCGGAAACATTTGCAGGGCTTACTACGCTAAAAGACTTCCGGATTAGTGACAATTCCTTTTCTGGAAAGATACCTAATTTTATTCAGAATTGGACAAATCTTGAAAAACTTGCGATTCAGGCCAGTGGCTTGACCGGGCCCATTCCTTACGGCATTTCTCTTTTGACAAAATTAACTGACATGAGAATTACTGACTTGAATGGACCTGAATCATCATTTCCTCCACTTGAGAATATGAAAAAACCAAAGATACTGATGTTGCGGAATTGCAATATTAGTGGACAGCTACCTGCATATCTTGGGGGAATGACGATTTTGAAAACTTTAGACCTCAGCTTTAACAAGCTAACTGGAGAAATTCCAAGCAGCTTTTCTGGACTAGCAAATGTGGATTACATGTTCTTGACTGGAAATATGCTCACTGGATCTGTGCCAGATTGGCTGAAAGGAGACAACATTGATCTTTCATACAACGATTTCACCACTAAGTCAGCAGCTGTCAGTTGTGAACCACTAGGCGGCTTGAACTTGTTTGCAAGCTCTTCCGGGGACAATACTTCATCTGTTTCATGTTTGAAAATTGCAAAATGTCCAAAAACTTCGTACTCTCTCCACATAAATTGTGGCGGAAAAGAAGCAACTCTCAGTGAAAATTTTACAAGGTCCACAATGGCAACATATGAGGATGATACAGATAAATCTGGGCCTTCATCATTTTACCAAAGCAGAACAAATTGGGCATCAAGCAACACTGGTTACTTTACTGATGATGATCGTCCTACAGATACCTTTATCTGGACTAATACATCTAGACTTTCTATAACCAATCCTCAGCTGTATTTGAATGCACGTCTTTCTCCTATTTCTCTAACTTATTATGGGTTTTGCCTGGGAAATGGAATCTACACAATAAACCTCCATTTTGCCGAGATAATGTTTACAAATGACAAAACATATAGCAGCTTGGGAAGGCGTATATTTGATATTTATATACAGGGGTCACTAGTGCTGAAGGATTTTAACATTGCGAATGACGCAGGAGGGTTTGGTATAGCAGTCGTAAAAAACTTCACTGCTAATGTAACCAGTAATACCTTGGAGATCCGTTTATTTTGGGCTGGGAAAGGAACCACTGGCATCCCTATAAGAGGAATCTATGGCCCTCTTATCTCCGCTATTTCTGTAGATCCTAACTTTGAACCCCCGCAAGAGGCCTCGGCAGGAGGTGGAGGTGGAAGTGGAATATCTGTAGGTGTCCTGGTTGGAATTGTGGTTGGGGGAATCTTCATTATACTACTTATTTTTGGTATTCTTTGGTGGAAAGGCTTTCTAAGAAGAGAAAGGACTCTTGAACAAGATTTAAATGGAGTGGACTTGAAAACTAGTAAATTTACCTTGAGGCAAATCAAAGCTGCCACAAACGACTTTAACCCAGCTAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTCACAAGGGCCTTCTATCAGATGGCACCATAATTGCTGTTAAGCAGCTTTCTGCCAAATCAAAACAAGGGAATCGTGAATTTGTGAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTCATCTTGTCAAGCTCTATGGATGCTGCATTGAAGGAAATCAATTGTTCCTTGTCTATGAGTACCTGGAAAATAATAGTCTTGCACGTGCTTTGTTTGGCCCGGAAGAACGTCAGTTAAAGTTAGATTGGCCAACAAGGCACAATATCTGTGTCGGTATTGCAAGAGGTTTGGCCTTCCTCCATGAGGAGTCAAGGTTGAAGATCGTTCATCGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCCAAGATATCCGACTTTCGATTGGCCAAACTTGATGAAGAGGAGAATACCCACATAAGCACCCGAATTGCTGGAACTTATGGATATATGGCACCTGAATATGCGATGCGTGGTTATTTAACTGATAAAGCCGATGTTTATAGTTTTGGAATTGTTGTACTGGAAATTGTCAGTGGGAGGAGCAATACAACTAACCGGACAAAGGAAGAATGCTTTTATCTTCTTGATTGGGCACTTCTTCTAAAAGAGAAAGGGAACGTACTGGAACTAGTTGATCCAAGGTTGGGCTCAGACTTTAACAAAGAAGAAATGATGATCACAATTAATGTGGCTCTTCTTTGCACTAATGTCATTGCAGCAGATAGGCCTACCATGTCTTCAGTGGTGAGCATGCTTGAAGGCAAGGCTTCTGTCCAAGAGTTGGTCTTGGATCCAAATGCGTCGAAGGATGAGATCAATGAAATGAGGAAACATTTTGAGTCCAATGTTGCAGAAAACACGAGTGAGAATAGTCAGAGGCAAACTATGTCAACCGAAGGGCCTTGGACTGCTTCATCTACATCAGTTAATGATCTTTATCCTGTCAATCCTGATTCAACTTACTGGGAGAACAGAAATTAG

Protein Analysis

1024

Amino Acids

112.7

Weight (kDa)

5.71

Isoelectric Point (pI)

29.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 287 - 343 4.9e-08 Leucine rich repeat
Malectin PF11721 406 - 596 2.9e-40 Malectin domain
Pkinase PF00069 682 - 888 1.7e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 683 - 890 2.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 248
Acc36I ACCTGC 2 cut(s) 248, 907
Acc65I GGTACC 1 cut(s) 389
AccB1I GGYRCC 4 cut(s) 389, 410, 2102, 2545
AccB7I CCANNNNNTGG 1 cut(s) 2875
AccIII TCCGGA 1 cut(s) 648
AciI CCGC 7 cut(s) 326, 373, 871, 1128, 1236, 1782, 1814
AclWI GGATC 8 cut(s) 167, 229, 1042, 1705, 1790, 2723, 2879, 2892
AcoI YGGCCR 3 cut(s) 504, 2327, 2478
AcsI RAATTY 6 cut(s) 160, 307, 966, 1261, 1997, 2156
AcuI CTGAAG 2 cut(s) 1640, 2817
AcvI CACGTG 1 cut(s) 2285
AfaI GTAC 6 cut(s) 250, 391, 1214, 2261, 2613, 2715
AfeI AGCGCT 1 cut(s) 169
AflIII ACRYGT 1 cut(s) 1005
AhlI ACTAGT 3 cut(s) 1612, 1991, 2722
AjiI CACGTC 2 cut(s) 280, 1460
AjnI CCWGG 3 cut(s) 1497, 1866, 2262
AjuI GAANNNNNNNTTGG 4 cut(s) 964, 996, 2052, 2084
AloI GAACNNNNNNTCC 2 cut(s) 992, 1024
Alw21I GWGCWC 1 cut(s) 46
Alw26I GTCTC 3 cut(s) 54, 1053, 2406
AlwI GGATC 8 cut(s) 167, 229, 1042, 1705, 1790, 2723, 2879, 2892
AlwNI CAGNNNCTG 1 cut(s) 1106
Aor13HI TCCGGA 1 cut(s) 648
Aor51HI AGCGCT 1 cut(s) 169
ApaI GGGCCC 1 cut(s) 750
ApeKI GCWGC 7 cut(s) 975, 1103, 1569, 2021, 2122, 2223, 2810
ApoI RAATTY 6 cut(s) 160, 307, 966, 1261, 1997, 2156
AseI ATTAAT 1 cut(s) 2778
Asp718I GGTACC 1 cut(s) 389
AspLEI GCGC 1 cut(s) 170
AsuC2I CCSGG 4 cut(s) 212, 745, 1156, 2300
AsuHPI GGTGA 6 cut(s) 229, 274, 361, 478, 1081, 2851
AvaII GGWCC 3 cut(s) 812, 1272, 2072
BaeGI GKGCMC 3 cut(s) 415, 750, 2689
BaeI ACNNNNGTAYC 2 cut(s) 851, 884
BalI TGGCCA 3 cut(s) 506, 2329, 2480
BamHI GGATCC 1 cut(s) 2884
BanI GGYRCC 4 cut(s) 389, 410, 2102, 2545
BanII GRGCYC 2 cut(s) 750, 2744
BauI CACGAG 1 cut(s) 2953
BbrPI CACGTG 1 cut(s) 2285
BbsI GAAGAC 2 cut(s) 155, 2823
Bbv12I GWGCWC 1 cut(s) 46
BbvCI CCTCAGC 2 cut(s) 941, 1440
BbvI GCAGC 7 cut(s) 987, 1115, 1581, 2008, 2134, 2210, 2822
BccI CCATC 3 cut(s) 401, 515, 2093
BceAI ACGGC 2 cut(s) 218, 775
BciT130I CCWGG 3 cut(s) 1499, 1868, 2264
BclI TGATCA 2 cut(s) 336, 2769
BcnI CCSGG 4 cut(s) 212, 745, 1156, 2300
BcoDI GTCTC 3 cut(s) 54, 1053, 2406
BcuI ACTAGT 3 cut(s) 1612, 1991, 2722
BfaI CTAG 7 cut(s) 59, 989, 1124, 1419, 1613, 1992, 2723
BfmI CTRYAG 3 cut(s) 1389, 1791, 1857
BfoI RGCGCY 1 cut(s) 171
BfuAI ACCTGC 2 cut(s) 248, 907
BglI GCCNNNNNGGC 2 cut(s) 1048, 2335
BisI GCNGC 8 cut(s) 976, 1104, 1129, 1570, 2022, 2123, 2224, 2811
BlsI GCNGC 8 cut(s) 977, 1105, 1130, 1571, 2023, 2124, 2225, 2812
Bme1390I CCNGG 7 cut(s) 212, 745, 1156, 1499, 1868, 2264, 2300
Bme18I GGWCC 3 cut(s) 812, 1272, 2072
BmgBI CACGTC 2 cut(s) 280, 1460
BmiI GGNNCC 9 cut(s) 88, 344, 391, 412, 748, 1738, 2104, 2547, 2886
BmrFI CCNGG 7 cut(s) 212, 745, 1156, 1499, 1868, 2264, 2300
BmrI ACTGGG 2 cut(s) 609, 3067
BmsI GCATC 5 cut(s) 220, 1358, 1755, 2210, 2550
BmuI ACTGGG 2 cut(s) 609, 3067
BpiI GAAGAC 2 cut(s) 155, 2823
BpmI CTGGAG 3 cut(s) 384, 549, 981
Bpu10I CCTNAGC 2 cut(s) 941, 1440
BpuEI CTTGAG 2 cut(s) 857, 2026
BpuMI CCSGG 4 cut(s) 212, 745, 1156, 2300
Bsa29I ATCGAT 1 cut(s) 510
BsaAI YACGTR 1 cut(s) 2285
BsaBI GATNNNNATC 3 cut(s) 1380, 2445, 3030
BsaJI CCNNGG 7 cut(s) 29, 1155, 1498, 1704, 1824, 2732, 2996
BsaWI WCCGGW 2 cut(s) 648, 2649
BsaXI ACNNNNNCTCC 4 cut(s) 382, 412, 2378, 2408
Bse3DI GCAATG 2 cut(s) 1632, 2805
Bse8I GATNNNNATC 3 cut(s) 1380, 2445, 3030
BseAI TCCGGA 1 cut(s) 648
BseBI CCWGG 3 cut(s) 1499, 1868, 2264
BseCI ATCGAT 1 cut(s) 510
BseDI CCNNGG 7 cut(s) 29, 1155, 1498, 1704, 1824, 2732, 2996
BseGI GGATG 5 cut(s) 393, 1300, 1746, 2225, 2908
BseJI GATNNNNATC 3 cut(s) 1380, 2445, 3030
BseMI GCAATG 2 cut(s) 1632, 2805
BseMII CTCAG 5 cut(s) 317, 955, 1267, 1454, 2757
BseRI GAGGAG 3 cut(s) 2399, 2510, 2647
BseSI GKGCMC 3 cut(s) 415, 750, 2689
BseXI GCAGC 7 cut(s) 987, 1115, 1581, 2008, 2134, 2210, 2822
BseYI CCCAGC 4 cut(s) 142, 313, 1727, 2041
BshNI GGYRCC 4 cut(s) 389, 410, 2102, 2545
BshVI ATCGAT 1 cut(s) 510
BsiHKAI GWGCWC 1 cut(s) 46
BsiSI CCGG 7 cut(s) 212, 611, 649, 744, 1155, 2300, 2650
BslFI GGGAC 1 cut(s) 1172
BsmAI GTCTC 3 cut(s) 54, 1053, 2406
BsmFI GGGAC 1 cut(s) 1172
BsmI GAATGC 3 cut(s) 579, 1459, 2669
Bsp120I GGGCCC 1 cut(s) 746
Bsp1286I GDGCHC 5 cut(s) 46, 415, 750, 2689, 2744
Bsp13I TCCGGA 1 cut(s) 648
BspACI CCGC 7 cut(s) 326, 373, 871, 1128, 1236, 1782, 1814
BspCNI CTCAG 5 cut(s) 316, 954, 1266, 1453, 2756
BspDI ATCGAT 1 cut(s) 510
BspEI TCCGGA 1 cut(s) 648
BspLI GGNNCC 9 cut(s) 88, 344, 391, 412, 748, 1738, 2104, 2547, 2886
BspMI ACCTGC 2 cut(s) 248, 907
BspPI GGATC 8 cut(s) 167, 229, 1042, 1705, 1790, 2723, 2879, 2892
BspQI GCTCTTC 2 cut(s) 1156, 2793
BspT107I GGYRCC 4 cut(s) 389, 410, 2102, 2545
BsrDI GCAATG 2 cut(s) 1632, 2805
BssECI CCNNGG 7 cut(s) 29, 1155, 1498, 1704, 1824, 2732, 2996
BssSI CACGAG 1 cut(s) 2953
BssT1I CCWWGG 3 cut(s) 1704, 2732, 2996
Bst2BI CACGAG 1 cut(s) 2953
Bst2UI CCWGG 3 cut(s) 1499, 1868, 2264
Bst4CI ACNGT 2 cut(s) 271, 449
Bst6I CTCTTC 4 cut(s) 1156, 1939, 2487, 2793
BstAPI GCANNNNNTGC 1 cut(s) 77
BstBAI YACGTR 1 cut(s) 2285
BstC8I GCNNGC 3 cut(s) 477, 1147, 2846
BstDEI CTNAG 8 cut(s) 253, 303, 941, 1095, 1253, 1440, 1940, 2743
BstENI CCTNNNNNAGG 2 cut(s) 1755, 2381
BstF5I GGATG 5 cut(s) 393, 1300, 1746, 2225, 2908
BstH2I RGCGCY 1 cut(s) 171
BstHHI GCGC 1 cut(s) 170
BstMAI GTCTC 3 cut(s) 54, 1053, 2406
BstMWI GCNNNNNNNGC 7 cut(s) 77, 86, 634, 728, 1048, 1643, 2335
BstNI CCWGG 3 cut(s) 1499, 1868, 2264
BstNSI RCATGY 2 cut(s) 1009, 2848
BstSCI CCNGG 7 cut(s) 210, 743, 1154, 1497, 1866, 2262, 2298
BstSFI CTRYAG 3 cut(s) 1389, 1791, 1857
BstSLI GKGCMC 3 cut(s) 415, 750, 2689
BstV1I GCAGC 7 cut(s) 987, 1115, 1581, 2008, 2134, 2210, 2822
BstV2I GAAGAC 2 cut(s) 155, 2823
BstX2I RGATCY 4 cut(s) 1034, 1710, 1795, 2884
BstYI RGATCY 4 cut(s) 1034, 1710, 1795, 2884
Bsu15I ATCGAT 1 cut(s) 510
BsuTUI ATCGAT 1 cut(s) 510
BtgZI GCGATG 1 cut(s) 2573
BtrI CACGTC 2 cut(s) 280, 1460
BtsCI GGATG 5 cut(s) 393, 1300, 1746, 2225, 2908
BtsI GCAGTG 1 cut(s) 1680
BtsIMutI CAGTG 9 cut(s) 267, 739, 1029, 1261, 1359, 1680, 1740, 2632, 2841
BveI ACCTGC 2 cut(s) 248, 907
Cac8I GCNNGC 3 cut(s) 477, 1147, 2846
CaiI CAGNNNCTG 1 cut(s) 1106
CfoI GCGC 1 cut(s) 170
ClaI ATCGAT 1 cut(s) 510
CseI GACGC 3 cut(s) 148, 1652, 2883
Csp6I GTAC 6 cut(s) 249, 390, 1213, 2260, 2612, 2714
CspCI CAANNNNNGTGG 6 cut(s) 868, 903, 1211, 1246, 2763, 2798
CviAII CATG 7 cut(s) 790, 1006, 1179, 2176, 2381, 2827, 2845
CviQI GTAC 6 cut(s) 249, 390, 1213, 2260, 2612, 2714
DdeI CTNAG 8 cut(s) 253, 303, 941, 1095, 1253, 1440, 1940, 2743
DraI TTTAAA 1 cut(s) 1971
EaeI YGGCCR 3 cut(s) 504, 2327, 2478
Eam1104I CTCTTC 4 cut(s) 1156, 1939, 2487, 2793
EarI CTCTTC 4 cut(s) 1156, 1939, 2487, 2793
EciI GGCGGA 1 cut(s) 1251
Eco130I CCWWGG 3 cut(s) 1704, 2732, 2996
Eco147I AGGCCT 2 cut(s) 1823, 2821
Eco24I GRGCYC 2 cut(s) 750, 2744
Eco32I GATATC 1 cut(s) 2463
Eco47I GGWCC 3 cut(s) 812, 1272, 2072
Eco47III AGCGCT 1 cut(s) 169
Eco57I CTGAAG 2 cut(s) 1640, 2817
Eco72I CACGTG 1 cut(s) 2285
EcoNI CCTNNNNNAGG 2 cut(s) 1755, 2381
EcoO109I RGGNCCY 2 cut(s) 2086, 2993
EcoRII CCWGG 3 cut(s) 1497, 1866, 2262
EcoRV GATATC 1 cut(s) 2463
EcoT14I CCWWGG 3 cut(s) 1704, 2732, 2996
EcoT38I GRGCYC 2 cut(s) 750, 2744
ErhI CCWWGG 3 cut(s) 1704, 2732, 2996
FaeI CATG 7 cut(s) 793, 1009, 1182, 2179, 2384, 2830, 2848
FaqI GGGAC 1 cut(s) 1172
FatI CATG 7 cut(s) 789, 1005, 1178, 2175, 2380, 2826, 2844
FauI CCCGC 3 cut(s) 333, 380, 1821
FauNDI CATATG 1 cut(s) 1288
FbaI TGATCA 2 cut(s) 336, 2769
Fnu4HI GCNGC 8 cut(s) 976, 1104, 1129, 1570, 2022, 2123, 2224, 2811
FokI GGATG 5 cut(s) 380, 1307, 1733, 2232, 2915
FriOI GRGCYC 2 cut(s) 750, 2744
Fsp4HI GCNGC 8 cut(s) 976, 1104, 1129, 1570, 2022, 2123, 2224, 2811
FspBI CTAG 7 cut(s) 59, 989, 1124, 1419, 1613, 1992, 2723
GlaI GCGC 1 cut(s) 169
GluI GCNGC 8 cut(s) 976, 1104, 1129, 1570, 2022, 2123, 2224, 2811
GsaI CCCAGC 4 cut(s) 146, 317, 1731, 2045
GsuI CTGGAG 3 cut(s) 384, 549, 981
HaeII RGCGCY 1 cut(s) 171
HapII CCGG 7 cut(s) 212, 611, 649, 744, 1155, 2300, 2650
HgaI GACGC 3 cut(s) 148, 1652, 2883
HhaI GCGC 1 cut(s) 170
Hin1II CATG 7 cut(s) 793, 1009, 1182, 2179, 2384, 2830, 2848
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HincII GTYRAC 1 cut(s) 2985
HindII GTYRAC 1 cut(s) 2985
HindIII AAGCTT 2 cut(s) 117, 545
HpaII CCGG 7 cut(s) 212, 611, 649, 744, 1155, 2300, 2650
HphI GGTGA 6 cut(s) 229, 274, 361, 478, 1081, 2851
Hpy166II GTNNAC 7 cut(s) 890, 1118, 1275, 1548, 1981, 2080, 2985
Hpy8I GTNNAC 7 cut(s) 890, 1118, 1275, 1548, 1981, 2080, 2985
Hpy99I CGWCG 1 cut(s) 2899
HpyCH4III ACNGT 2 cut(s) 271, 449
HpyCH4IV ACGT 5 cut(s) 279, 1459, 2284, 2308, 2712
HpyF10VI GCNNNNNNNGC 7 cut(s) 77, 86, 634, 728, 1048, 1643, 2335
HpyF3I CTNAG 8 cut(s) 253, 303, 941, 1095, 1253, 1440, 1940, 2743
HpySE526I ACGT 5 cut(s) 279, 1459, 2284, 2308, 2712
Hsp92II CATG 7 cut(s) 793, 1009, 1182, 2179, 2384, 2830, 2848
HspAI GCGC 1 cut(s) 168
Kpn2I TCCGGA 1 cut(s) 648
KpnI GGTACC 1 cut(s) 393
Ksp22I TGATCA 2 cut(s) 336, 2769
LguI GCTCTTC 2 cut(s) 1156, 2793
LmnI GCTCC 3 cut(s) 86, 348, 2634
Lsp1109I GCAGC 7 cut(s) 987, 1115, 1581, 2008, 2134, 2210, 2822
LweI GCATC 5 cut(s) 220, 1358, 1755, 2210, 2550
MaeI CTAG 7 cut(s) 59, 989, 1124, 1419, 1613, 1992, 2723
MaeII ACGT 5 cut(s) 279, 1459, 2284, 2308, 2712
MaeIII GTNAC 6 cut(s) 235, 280, 656, 1364, 1608, 1690
MfeI CAATTG 2 cut(s) 244, 2240
MflI RGATCY 4 cut(s) 1034, 1710, 1795, 2884
MhlI GDGCHC 5 cut(s) 46, 415, 750, 2689, 2744
MlsI TGGCCA 3 cut(s) 506, 2329, 2480
MluNI TGGCCA 3 cut(s) 506, 2329, 2480
MlyI GAGTC 3 cut(s) 1948, 2396, 2942
MmeI TCCRAC 3 cut(s) 421, 1852, 2490
Mox20I TGGCCA 3 cut(s) 506, 2329, 2480
MroI TCCGGA 1 cut(s) 648
MscI TGGCCA 3 cut(s) 506, 2329, 2480
Msp20I TGGCCA 3 cut(s) 506, 2329, 2480
MspA1I CMGCKG 2 cut(s) 1106, 1444
MspI CCGG 7 cut(s) 212, 611, 649, 744, 1155, 2300, 2650
MspR9I CCNGG 7 cut(s) 212, 745, 1156, 1499, 1868, 2264, 2300
MunI CAATTG 2 cut(s) 244, 2240
Mva1269I GAATGC 3 cut(s) 579, 1459, 2669
MvaI CCWGG 3 cut(s) 1499, 1868, 2264
MwoI GCNNNNNNNGC 7 cut(s) 77, 86, 634, 728, 1048, 1643, 2335
NciI CCSGG 4 cut(s) 212, 745, 1156, 2300
NdeI CATATG 1 cut(s) 1288
NlaIII CATG 7 cut(s) 793, 1009, 1182, 2179, 2384, 2830, 2848
NlaIV GGNNCC 9 cut(s) 88, 344, 391, 412, 748, 1738, 2104, 2547, 2886
NmeAIII GCCGAG 3 cut(s) 10, 1561, 1805
NmuCI GTSAC 4 cut(s) 235, 280, 656, 1608
NspI RCATGY 2 cut(s) 1009, 2848
PaeI GCATGC 1 cut(s) 2848
PaqCI CACCTGC 1 cut(s) 248
PceI AGGCCT 2 cut(s) 1823, 2821
PciI ACATGT 1 cut(s) 1005
PciSI GCTCTTC 2 cut(s) 1156, 2793
PcsI WCGNNNNNNNCGW 1 cut(s) 37
PctI GAATGC 3 cut(s) 579, 1459, 2669
PfeI GAWTC 7 cut(s) 724, 818, 1509, 1761, 1890, 2149, 3047
PflMI CCANNNNNTGG 1 cut(s) 2875
PkrI GCNGC 8 cut(s) 977, 1105, 1130, 1571, 2023, 2124, 2225, 2812
PleI GAGTC 3 cut(s) 1948, 2395, 2941
PmaCI CACGTG 1 cut(s) 2285
PmlI CACGTG 1 cut(s) 2285
PpsI GAGTC 3 cut(s) 1948, 2395, 2941
Ppu21I YACGTR 1 cut(s) 2285
PscI ACATGT 1 cut(s) 1005
PshBI ATTAAT 1 cut(s) 2778
Psp6I CCWGG 3 cut(s) 1497, 1866, 2262
PspCI CACGTG 1 cut(s) 2285
PspFI CCCAGC 4 cut(s) 142, 313, 1727, 2041
PspGI CCWGG 3 cut(s) 1497, 1866, 2262
PspN4I GGNNCC 9 cut(s) 88, 344, 391, 412, 748, 1738, 2104, 2547, 2886
PspOMI GGGCCC 1 cut(s) 746
PstNI CAGNNNCTG 1 cut(s) 1106
PsuI RGATCY 4 cut(s) 1034, 1710, 1795, 2884
PvuII CAGCTG 2 cut(s) 1106, 1444
RsaI GTAC 6 cut(s) 250, 391, 1214, 2261, 2613, 2715
RsaNI GTAC 6 cut(s) 249, 390, 1213, 2260, 2612, 2714
SapI GCTCTTC 2 cut(s) 1156, 2793
SatI GCNGC 8 cut(s) 976, 1104, 1129, 1570, 2022, 2123, 2224, 2811
SchI GAGTC 3 cut(s) 1948, 2396, 2942
ScrFI CCNGG 7 cut(s) 212, 745, 1156, 1499, 1868, 2264, 2300
SduI GDGCHC 5 cut(s) 46, 415, 750, 2689, 2744
SfaNI GCATC 5 cut(s) 220, 1358, 1755, 2210, 2550
SfcI CTRYAG 3 cut(s) 1389, 1791, 1857
SinI GGWCC 3 cut(s) 812, 1272, 2072
SmiI ATTTAAAT 1 cut(s) 1971
SmlI CTYRAG 2 cut(s) 836, 2005
SmoI CTYRAG 2 cut(s) 836, 2005
SpeI ACTAGT 3 cut(s) 1612, 1991, 2722
SphI GCATGC 1 cut(s) 2848
SseBI AGGCCT 2 cut(s) 1823, 2821
SsiI CCGC 7 cut(s) 326, 373, 871, 1128, 1236, 1782, 1814
SspI AATATT 1 cut(s) 883
SspMI CTAG 7 cut(s) 59, 989, 1124, 1419, 1613, 1992, 2723
StuI AGGCCT 2 cut(s) 1823, 2821
StyD4I CCNGG 7 cut(s) 210, 743, 1154, 1497, 1866, 2262, 2298
StyI CCWWGG 3 cut(s) 1704, 2732, 2996
SwaI ATTTAAAT 1 cut(s) 1971
TaaI ACNGT 2 cut(s) 271, 449
TaiI ACGT 5 cut(s) 282, 1462, 2287, 2311, 2715
TaqI TCGA 5 cut(s) 94, 510, 2410, 2473, 2897
TatI WGTACW 1 cut(s) 2611
TauI GCSGC 1 cut(s) 1131
TfiI GAWTC 7 cut(s) 724, 818, 1509, 1761, 1890, 2149, 3047
TscAI CASTG 9 cut(s) 274, 739, 1036, 1261, 1366, 1687, 1747, 2632, 2841
TseFI GTSAC 4 cut(s) 235, 280, 656, 1608
TseI GCWGC 7 cut(s) 975, 1103, 1569, 2021, 2122, 2223, 2810
Tsp45I GTSAC 4 cut(s) 235, 280, 656, 1608
TspGWI ACGGA 1 cut(s) 1703
TspRI CASTG 9 cut(s) 274, 739, 1036, 1261, 1366, 1687, 1747, 2632, 2841
Van91I CCANNNNNTGG 1 cut(s) 2875
VpaK11BI GGWCC 3 cut(s) 812, 1272, 2072
VspI ATTAAT 1 cut(s) 2778
XagI CCTNNNNNAGG 2 cut(s) 1755, 2381
XapI RAATTY 6 cut(s) 160, 307, 966, 1261, 1997, 2156
XbaI TCTAGA 1 cut(s) 1418
XceI RCATGY 2 cut(s) 1009, 2848
XcmI CCANNNNNNNNNTGG 3 cut(s) 1229, 1702, 2833
XspI CTAG 7 cut(s) 59, 989, 1124, 1419, 1613, 1992, 2723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.