RLG00000033190

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
24245807 .. 24248310
2504 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033190

Sequence Viewer

Length: 1179 bp
ATGTTATGTAATTGTACTACTTTGCAGGGGTCACTAGTGTGCAAGGATTTCAATATTGCAGATGCAGCAGGTGGCTTTCGTAAGGCAGTCACAAAAAAATTCACTGCTAACGTAACTGATGGCACTTTGGAGATCCGTTTATTCTGGGCCGGGAAAGGGACAACAGGTGTCCCTTACAAAGGAGACTATGGTCCTCTTATATCAGCGATCTCTATAGTTTCTGACCTTCCACCCCCTCAAGAAACCCCGCCAGGAGGTGGAAGCAGTGTTATATCTGCAGGTACAGTGGTTGGAATCGTGGCTGGAGGAGTTTTCATTATATTACTGGTTTTAGGTATTCTCTGGTGGAAAGGCTTCATAGGACCACTTTATGGATGTTGTATTGAAGGAAATGACTTGTTGCTTGTCTATGAGTACTTGGAAAATAATAGTGTTGCTCGTGCTCTGTTTGGCCCAAAAGCAAGTCAGGTGAAGATGGATTGGCTAACAAGGCACAGGATCTGTGTTGGTATAGCAAAAGGTTTGGCTTACCTCCATGAGGAATCAAGGTTGAAGATTGTTCATAGAGACATTAAAGCTACTAATGTGCTACTCGATAAAAATCTTTGTCCAAAGATAGCTGATTTTGGATTGGCCAAGCTTGATGAAGAGGATAATACCCACATAAGCACCCGGATTGCTGGAACTCTTGGATATATGGCACCTGAATATGCAATGCGAGGTTATCTGACTTATAAAGCAGATGTTTATAGTTTCGGAGTTGTTGTGTTGGAAATAGTCAGTGGGAGGAGCAACACAACTTACTGCTCCGAAGAAGAATGTTTTTATCTTCTTGAATCTCTGCTTCCTTCTCTAATCTTGAGTTTAATTTCATACGCACTTCTTCTAAAGGAGAGAGGGAGTTTGTTGGCTCTAGTGGATCCAAGGCTAGGCTCAGAGTTTAACAAAGAACAGATGATTACTACAATCAATGTGGCTCTCCTTTGCTCTCATGTGTCTTCAGCAGTTAGGCCTTCCATGTCTTCAGTGGTGAAAATGCTTGAAGGCAGGGCTTCGGTTCAGCAGGTGATGTCTGATCCAAATGCCTCAAACAATGAAATCAATGCAATGAGGAAACATTTTCAATCCAGTTTTGAAGAAAACAATGGCGACCTTGAGAGTCAGAGACAATCTATATAA

Protein Analysis

393

Amino Acids

42.68

Weight (kDa)

6.12

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 8 - 70 5.4e-12 Malectin domain
Pkinase PF00069 122 - 264 1.3e-28 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 123 - 277 9.6e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
AarI CACCTGC 2 cut(s) 59, 1054
Acc36I ACCTGC 3 cut(s) 59, 269, 1054
AccB1I GGYRCC 1 cut(s) 700
AccB7I CCANNNNNTGG 2 cut(s) 257, 371
AciI CCGC 1 cut(s) 248
AclWI GGATC 5 cut(s) 127, 506, 914, 927, 1070
AcoI YGGCCR 1 cut(s) 633
AcsI RAATTY 1 cut(s) 98
AcuI CTGAAG 2 cut(s) 984, 1008
AfaI GTAC 3 cut(s) 16, 283, 416
AfiI CCNNNNNNNGG 7 cut(s) 156, 179, 254, 257, 371, 538, 929
AgsI TTSAA 7 cut(s) 52, 386, 553, 836, 1043, 1124, 1136
AhlI ACTAGT 1 cut(s) 34
AjnI CCWGG 1 cut(s) 250
AleI CACNNNNGTG 1 cut(s) 37
AluBI AGCT 3 cut(s) 578, 620, 640
AluI AGCT 3 cut(s) 578, 620, 640
Alw21I GWGCWC 1 cut(s) 445
Alw26I GTCTC 3 cut(s) 177, 561, 1159
AlwI GGATC 5 cut(s) 127, 506, 914, 927, 1070
AlwNI CAGNNNCTG 1 cut(s) 501
AoxI GGCC 4 cut(s) 147, 451, 633, 1010
ApeKI GCWGC 1 cut(s) 65
ApoI RAATTY 1 cut(s) 98
Asp700I GAANNNNTTC 1 cut(s) 353
AspS9I GGNCC 4 cut(s) 147, 191, 362, 452
AsuC2I CCSGG 2 cut(s) 151, 673
AsuHPI GGTGA 3 cut(s) 481, 1042, 1078
AvaII GGWCC 2 cut(s) 191, 362
BaeI ACNNNNGTAYC 2 cut(s) 273, 306
BalI TGGCCA 1 cut(s) 635
BamHI GGATCC 1 cut(s) 919
BanI GGYRCC 1 cut(s) 700
BauI CACGAG 1 cut(s) 438
BbsI GAAGAC 2 cut(s) 990, 1014
Bbv12I GWGCWC 1 cut(s) 445
BbvI GCAGC 1 cut(s) 77
BccI CCATC 2 cut(s) 113, 469
BciT130I CCWGG 1 cut(s) 252
BcnI CCSGG 2 cut(s) 151, 673
BcoDI GTCTC 3 cut(s) 177, 561, 1159
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 3 cut(s) 35, 914, 929
BfmI CTRYAG 2 cut(s) 213, 276
BfuAI ACCTGC 3 cut(s) 59, 269, 1054
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
BmcAI AGTACT 1 cut(s) 416
Bme1390I CCNGG 3 cut(s) 151, 252, 673
Bme18I GGWCC 2 cut(s) 191, 362
BmgT120I GGNCC 4 cut(s) 147, 191, 362, 452
BmiI GGNNCC 2 cut(s) 702, 921
BmrFI CCNGG 3 cut(s) 151, 252, 673
BmsI GCATC 1 cut(s) 52
BoxI GACNNNNGTC 1 cut(s) 189
BpiI GAAGAC 2 cut(s) 990, 1014
BpmI CTGGAG 1 cut(s) 324
BpuEI CTTGAG 3 cut(s) 222, 880, 1175
BpuMI CCSGG 2 cut(s) 151, 673
BsaBI GATNNNNATC 1 cut(s) 600
BsaJI CCNNGG 1 cut(s) 923
BsaXI ACNNNNNCTCC 2 cut(s) 750, 780
Bsc4I CCNNNNNNNGG 7 cut(s) 156, 179, 254, 257, 371, 538, 929
Bse1I ACTGG 2 cut(s) 330, 1128
Bse3DI GCAATG 2 cut(s) 720, 1113
Bse8I GATNNNNATC 1 cut(s) 600
BseBI CCWGG 1 cut(s) 252
BseDI CCNNGG 1 cut(s) 923
BseGI GGATG 1 cut(s) 380
BseJI GATNNNNATC 1 cut(s) 600
BseLI CCNNNNNNNGG 7 cut(s) 156, 179, 254, 257, 371, 538, 929
BseMI GCAATG 2 cut(s) 720, 1113
BseMII CTCAG 1 cut(s) 948
BseNI ACTGG 2 cut(s) 330, 1128
BseRI GAGGAG 2 cut(s) 321, 802
BseXI GCAGC 1 cut(s) 77
BshFI GGCC 4 cut(s) 149, 453, 635, 1012
BshNI GGYRCC 1 cut(s) 700
BsiHKAI GWGCWC 1 cut(s) 445
BsiSI CCGG 2 cut(s) 150, 673
BslFI GGGAC 2 cut(s) 155, 172
BslI CCNNNNNNNGG 7 cut(s) 156, 179, 254, 257, 371, 538, 929
BsmAI GTCTC 3 cut(s) 177, 561, 1159
BsmFI GGGAC 2 cut(s) 155, 172
BsnI GGCC 4 cut(s) 149, 453, 635, 1012
Bsp1286I GDGCHC 1 cut(s) 445
Bsp143I GATC 5 cut(s) 132, 207, 498, 919, 1075
BspACI CCGC 1 cut(s) 248
BspANI GGCC 4 cut(s) 149, 453, 635, 1012
BspCNI CTCAG 1 cut(s) 947
BspLI GGNNCC 2 cut(s) 702, 921
BspMAI CTGCAG 1 cut(s) 280
BspMI ACCTGC 3 cut(s) 59, 269, 1054
BspPI GGATC 5 cut(s) 127, 506, 914, 927, 1070
BspT107I GGYRCC 1 cut(s) 700
BsrDI GCAATG 2 cut(s) 720, 1113
BsrI ACTGG 2 cut(s) 330, 1128
BssECI CCNNGG 1 cut(s) 923
BssMI GATC 5 cut(s) 132, 207, 498, 919, 1075
BssSI CACGAG 1 cut(s) 438
BssT1I CCWWGG 1 cut(s) 923
Bst2BI CACGAG 1 cut(s) 438
Bst2UI CCWGG 1 cut(s) 252
Bst4CI ACNGT 1 cut(s) 286
Bst6I CTCTTC 1 cut(s) 642
BstDEI CTNAG 1 cut(s) 934
BstENI CCTNNNNNAGG 2 cut(s) 177, 536
BstF5I GGATG 1 cut(s) 380
BstKTI GATC 5 cut(s) 135, 210, 501, 922, 1078
BstMAI GTCTC 3 cut(s) 177, 561, 1159
BstMBI GATC 5 cut(s) 132, 207, 498, 919, 1075
BstMWI GCNNNNNNNGC 2 cut(s) 65, 490
BstNI CCWGG 1 cut(s) 252
BstPAI GACNNNNGTC 1 cut(s) 189
BstSCI CCNGG 3 cut(s) 149, 250, 671
BstSFI CTRYAG 2 cut(s) 213, 276
BstV1I GCAGC 1 cut(s) 77
BstV2I GAAGAC 2 cut(s) 990, 1014
BstX2I RGATCY 3 cut(s) 132, 498, 919
BstYI RGATCY 3 cut(s) 132, 498, 919
BsuRI GGCC 4 cut(s) 149, 453, 635, 1012
BtsCI GGATG 1 cut(s) 380
BtsI GCAGTG 2 cut(s) 102, 271
BtsIMutI CAGTG 5 cut(s) 102, 271, 291, 787, 1032
BveI ACCTGC 3 cut(s) 59, 269, 1054
CaiI CAGNNNCTG 1 cut(s) 501
Cfr13I GGNCC 4 cut(s) 147, 191, 362, 452
Csp6I GTAC 3 cut(s) 15, 282, 415
CspCI CAANNNNNGTGG 2 cut(s) 954, 989
CviAII CATG 3 cut(s) 536, 992, 1018
CviQI GTAC 3 cut(s) 15, 282, 415
DdeI CTNAG 1 cut(s) 934
DpnI GATC 5 cut(s) 134, 209, 500, 921, 1077
DpnII GATC 5 cut(s) 132, 207, 498, 919, 1075
EaeI YGGCCR 1 cut(s) 633
Eam1104I CTCTTC 1 cut(s) 642
EarI CTCTTC 1 cut(s) 642
Eco130I CCWWGG 1 cut(s) 923
Eco147I AGGCCT 1 cut(s) 1012
Eco47I GGWCC 2 cut(s) 191, 362
Eco57I CTGAAG 2 cut(s) 984, 1008
EcoNI CCTNNNNNAGG 2 cut(s) 177, 536
EcoRII CCWGG 1 cut(s) 250
EcoT14I CCWWGG 1 cut(s) 923
ErhI CCWWGG 1 cut(s) 923
FaeI CATG 3 cut(s) 539, 995, 1021
FaqI GGGAC 2 cut(s) 155, 172
FatI CATG 3 cut(s) 535, 991, 1017
FauI CCCGC 1 cut(s) 255
Fnu4HI GCNGC 1 cut(s) 66
FokI GGATG 1 cut(s) 387
Fsp4HI GCNGC 1 cut(s) 66
FspBI CTAG 3 cut(s) 35, 914, 929
GluI GCNGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 324
HaeIII GGCC 4 cut(s) 149, 453, 635, 1012
HapII CCGG 2 cut(s) 150, 673
Hin1II CATG 3 cut(s) 539, 995, 1021
HindIII AAGCTT 1 cut(s) 638
HinfI GANTC 4 cut(s) 294, 542, 836, 1159
HpaII CCGG 2 cut(s) 150, 673
HphI GGTGA 3 cut(s) 481, 1042, 1078
Hpy188I TCNGA 7 cut(s) 223, 729, 758, 811, 937, 1075, 1164
Hpy188III TCNNGA 3 cut(s) 239, 833, 859
HpyAV CCTTC 5 cut(s) 236, 380, 858, 1023, 1037
HpyCH4III ACNGT 1 cut(s) 286
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 7 cut(s) 25, 42, 59, 65, 278, 713, 1106
HpyF10VI GCNNNNNNNGC 2 cut(s) 65, 490
HpyF3I CTNAG 1 cut(s) 934
HpySE526I ACGT 1 cut(s) 111
Hsp92II CATG 3 cut(s) 539, 995, 1021
Kzo9I GATC 5 cut(s) 132, 207, 498, 919, 1075
LmnI GCTCC 2 cut(s) 789, 812
Lsp1109I GCAGC 1 cut(s) 77
LweI GCATC 1 cut(s) 52
MaeI CTAG 3 cut(s) 35, 914, 929
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 3 cut(s) 30, 88, 112
MalI GATC 5 cut(s) 134, 209, 500, 921, 1077
MboI GATC 5 cut(s) 132, 207, 498, 919, 1075
MflI RGATCY 3 cut(s) 132, 498, 919
MhlI GDGCHC 1 cut(s) 445
MlsI TGGCCA 1 cut(s) 635
MluCI AATT 3 cut(s) 10, 98, 867
MluNI TGGCCA 1 cut(s) 635
MlyI GAGTC 1 cut(s) 1168
MmeI TCCRAC 2 cut(s) 271, 750
Mox20I TGGCCA 1 cut(s) 635
MroXI GAANNNNTTC 1 cut(s) 353
MscI TGGCCA 1 cut(s) 635
MseI TTAA 3 cut(s) 573, 866, 942
MslI CAYNNNNRTG 1 cut(s) 37
Msp20I TGGCCA 1 cut(s) 635
MspI CCGG 2 cut(s) 150, 673
MspR9I CCNGG 3 cut(s) 151, 252, 673
MvaI CCWGG 1 cut(s) 252
MwoI GCNNNNNNNGC 2 cut(s) 65, 490
NciI CCSGG 2 cut(s) 151, 673
NdeII GATC 5 cut(s) 132, 207, 498, 919, 1075
NlaIII CATG 3 cut(s) 539, 995, 1021
NlaIV GGNNCC 2 cut(s) 702, 921
NmuCI GTSAC 2 cut(s) 30, 88
OliI CACNNNNGTG 1 cut(s) 37
PaqCI CACCTGC 2 cut(s) 59, 1054
PceI AGGCCT 1 cut(s) 1012
PdmI GAANNNNTTC 1 cut(s) 353
PfeI GAWTC 3 cut(s) 294, 542, 836
PflMI CCANNNNNTGG 2 cut(s) 257, 371
PkrI GCNGC 1 cut(s) 67
PleI GAGTC 1 cut(s) 1167
PpsI GAGTC 1 cut(s) 1167
PshAI GACNNNNGTC 1 cut(s) 189
PsiI TTATAA 1 cut(s) 735
Psp6I CCWGG 1 cut(s) 250
PspGI CCWGG 1 cut(s) 250
PspN4I GGNNCC 2 cut(s) 702, 921
PspPI GGNCC 4 cut(s) 147, 191, 362, 452
PstI CTGCAG 1 cut(s) 280
PstNI CAGNNNCTG 1 cut(s) 501
PsuI RGATCY 3 cut(s) 132, 498, 919
RsaI GTAC 3 cut(s) 16, 283, 416
RsaNI GTAC 3 cut(s) 15, 282, 415
RseI CAYNNNNRTG 1 cut(s) 37
SaqAI TTAA 3 cut(s) 573, 866, 942
SatI GCNGC 1 cut(s) 66
Sau3AI GATC 5 cut(s) 132, 207, 498, 919, 1075
Sau96I GGNCC 4 cut(s) 147, 191, 362, 452
ScaI AGTACT 1 cut(s) 416
SchI GAGTC 1 cut(s) 1168
ScrFI CCNGG 3 cut(s) 151, 252, 673
SduI GDGCHC 1 cut(s) 445
SfaNI GCATC 1 cut(s) 52
SfcI CTRYAG 2 cut(s) 213, 276
SinI GGWCC 2 cut(s) 191, 362
SmiMI CAYNNNNRTG 1 cut(s) 37
SmlI CTYRAG 3 cut(s) 237, 859, 1154
SmoI CTYRAG 3 cut(s) 237, 859, 1154
SpeI ACTAGT 1 cut(s) 34
Sse9I AATT 3 cut(s) 10, 98, 867
SseBI AGGCCT 1 cut(s) 1012
SsiI CCGC 1 cut(s) 248
SspI AATATT 1 cut(s) 55
SspMI CTAG 3 cut(s) 35, 914, 929
StuI AGGCCT 1 cut(s) 1012
StyD4I CCNGG 3 cut(s) 149, 250, 671
StyI CCWWGG 1 cut(s) 923
TaaI ACNGT 1 cut(s) 286
TaiI ACGT 1 cut(s) 114
TaqI TCGA 1 cut(s) 594
TasI AATT 3 cut(s) 10, 98, 867
TatI WGTACW 2 cut(s) 14, 414
TfiI GAWTC 3 cut(s) 294, 542, 836
Tru1I TTAA 3 cut(s) 573, 866, 942
Tru9I TTAA 3 cut(s) 573, 866, 942
TscAI CASTG 5 cut(s) 109, 271, 291, 787, 1032
TseFI GTSAC 2 cut(s) 30, 88
TseI GCWGC 1 cut(s) 65
Tsp45I GTSAC 2 cut(s) 30, 88
TspDTI ATGAA 6 cut(s) 304, 346, 551, 660, 861, 1110
TspGWI ACGGA 1 cut(s) 125
TspRI CASTG 5 cut(s) 109, 271, 291, 787, 1032
Van91I CCANNNNNTGG 2 cut(s) 257, 371
VpaK11BI GGWCC 2 cut(s) 191, 362
XagI CCTNNNNNAGG 2 cut(s) 177, 536
XapI RAATTY 1 cut(s) 98
XcmI CCANNNNNNNNNTGG 1 cut(s) 1024
XmnI GAANNNNTTC 1 cut(s) 353
XspI CTAG 3 cut(s) 35, 914, 929
ZrmI AGTACT 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.