FvH4_3g17850

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
11362874 .. 11372869
9996 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17850.t2

Sequence Viewer

Length: 3081 bp
ATGAGAAAGATGAAGAACTGCAAGCTGTTGATCCATCGTCTTCTTGTTCATTCTCTCTTGCTACTTTGCTTTGCAGCCTTGGCTTTCGGAGCTAATCGGTTATCAGCTGATGAAGTACAAGCTTTGAAGGACATAGCAAAGACACTGGGGAAGACAAACTGGAATTTCAGTGCTGATCCCTGCAGCGGAGAATATGGATGGATTACTCAAGCCGACAAATATAATGCCAATAACGTCACCTGCGGCCATTGTACAACTTCCGATGCGGCCAACGCCACCGGTACTACTGATCAGATCTGCCACGTTGTTAGCATACTTCTGAGAGCTCAGAATTTGCCAGGAACACTTCCCTCAGAAATGGCGAGGCTTCCCTATCTCCAACAAATTGACCTTGCTCGTAACTATCTGAATGGAACCATCCCTCCAGAATGGGGTTCTCTGCCACTAGTTAACATTTCTCTTGTTGGAAACCGCTTGACAGGTTCTATCCCCGTTGAGCTTGCAAATATTACCACCCTGAAAAGTTTAACCATAGATTTCAATAATTTCTCTGGAGGTCTTCCTTGGGAACTTGGATTCTTGCCTAGCATAGAAACACTTGTTCTTACCTCAAACAATTTTACTGGGGAGTTGCCAGATACATTTGCAAAGCTCACCAAATTAAAGGATTTTCGGATTATTGACAATTCGCTTTCTGGGAAAATACCAGACTACATTCAAAACTGGACAAATATCAAGAAACTAGGGATTCAGGCTAGTGGTTTGACGGGACCAATTCCTTCTGGAATTTCTCTATTGACAAGTTTAACTGACCTGAGAATTACTGACTTGAATGGACCTGAATCATCCTTTCCTCGACTTGAGAATATGAAGAACTTGAAGATATTGATCTTGAGGAGTTGCTATATTAATGGACAGCTACCAGAATATTTTTCCGACATGACAGAGTTGACAACTTTAGACCTCAGCTTCAACAAGCTAACTGGAAAAGTCCCAAGGAGCTTTGTTGCTCCAACAAATAATTTGGACTACATATTCTTAACTGGAAATTTGCTGAATGGACCCGAGCCTCTGTGGATGGTAGGGGAAAATGTTGATCTTTCATATAACAATTTCACAATCACCCCAGGGCCTGTAAATTGTCAGCCACAAGCCGGCTGGAACTTGTTTGCAGGCTCTTCAGAGGGCAACAGTTCAGCTGTTTCGTGTTTGAGCAATAAAACTACAACTTGTTCCAAAAGTTGGTATACTCTCAATATAAATTGTGGAGGAAGTGGAGTAACAGTTGACGGAACAACATATGATGAGGATATAACTGCAAATGGACCTTCATCATATTACATGAGCAGCACAAATTGGGTGTCAAGCAGCACCGGTTACTTCCCTGATGATGACAGTTCTACAGACCACTTTACTTCGTCTACTAATTCATCTAGACTGTCTATGGCCAATGCTCAACTATACATGACTGCACGCCTTTCTCCCATCTCTCTAACTTATTATGGGTTTTGCCTGTTAAATGGAAACTACACAGTAAATCTCCATTTTGCGGAGATAATGTTTACAAATGGTCCAACATATAGCAGCTTGGGAAGGCGCATATTTGATGTTTACATTCAGGGCATACGAGTGCTGCAGGATTTCAATATTGCAGATGAGGCAGGTGGAGCTGGTAAGGCTGTCATAAAAAACTATACTGCTGCAGTAACTACTAATACGTTGGAGATCCGTTTCTTTTGGGCCGGGAAAGGAACCACTGGTATCCCTGTAAGAGGAGTTTATGGTCCTCTTATCTCCGCCATATCTGTAGTTCCAGACTTTGAACCCCCGGCAGAAATCTCGTCAGGACACATATCAAAGAGTATCTCTATAGGTGCAGTGGTTGGAATTATGGCTGCAGGGGCAGTATTCCTTGTATTGCTGGTTTTCGCTTATCTTTGGTGGAGAGGCTATCTAAGACGAGAAAGGACTTTGGAGCAAGATTTAAAAGGTGTTGACCTGCAAACTGGTAAATTTAGCTTGAGACAAATCAAAGATGCCACGAAGAACTTTGACATATCCAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCCAGCTATCAGATGGCACCATAATTGCTGTTAAGCAGCTTTCTGCCAAATCAAAGCAAGGAAATCGTGAATTTGTAAATGAGATCGGCATGATTTCTGCTCTGCAACACCCTCATCTTGTCAAGCTGTATGGATGCTGCATTGAAGGAAATCAGTTGTTGCTTGTCTACGAATACATGGAAAATAACAGTGTTGGACGCGCTTTGTTTGGTGCAAAAGAAAGTCAGTTGAAGTTAGATTGGCCAACAAGGCACAAGATTTGTGTTGGTATAGCAAAAGGTCTGGCTTACCTCCATGAAGAATCACGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTGCTTGATAAAAATCTTGACCCGAAGATATCAGACTTTGGCCTAGCCAAGCTTGATGAAGATGATAGTACCCATATAAGCACTAGGATTGCTGGAACTTATGGATATATGGCGCCTGAATATGCAATGCGGGGTTATCTAACTGATAAAGCAGATGTGTATAGTTTTGGAATTCTCGTATTGGAAATGGTCAGCGGAAGGTGCAATACAACTTACCGTTCCAAGGAAGAGAGCTTTTACATTCTTGACTGGGCACTTCTTCTACAAGAGAAAGCAAGTTTGCTAGACCTAGTCGATCCAAGGTTGGGTTGCGATTTTAACAAAGAAGAAGTGATGATTACCATCAATGTGGCTCTACTTTGCTGTAATATCACTGCAGCACTTAGGCCCGCGATGTCTTTAGTGGTGAGCATGCTTGAAGGCAGGGCTCGTGTTGCAGACTTGGTATTAGATTCAAGTGCCTCATCACAGGAGATCGGTGAAATGAGGAAACATTTTGGATCCAGTTACTCATTGGAGACCACCGGTGGAAGTACAGAGAACGATGTGCATGGAAGGGGCGTGCATGGAAGCGACATCAGTTCAGGGGCTCTATCCAATCAATCCTCATTCAAGTTGCTGGAAGAACAGTAA

Protein Analysis

1027

Amino Acids

112.26

Weight (kDa)

5.9

Isoelectric Point (pI)

30.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 167 - 274 8.4e-06 Leucine-rich repeat region
LRR_8 PF13855 292 - 352 4.3e-08 Leucine rich repeat
Malectin PF11721 417 - 601 2.2e-44 Malectin domain
Pkinase PF00069 685 - 840 1.6e-33 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 686 - 840 6.8e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 248, 1652
Acc36I ACCTGC 3 cut(s) 248, 1652, 2007
AccB1I GGYRCC 2 cut(s) 2117, 2560
AccB7I CCANNNNNTGG 1 cut(s) 1242
AccI GTMKAC 3 cut(s) 1247, 1421, 2268
AccII CGCG 2 cut(s) 2301, 2840
AciI CCGC 9 cut(s) 186, 243, 266, 472, 1550, 1797, 2578, 2643, 2838
AclWI GGATC 6 cut(s) 25, 170, 1720, 2738, 2943, 2956
AcoI YGGCCR 4 cut(s) 244, 267, 1446, 2342
AcsI RAATTY 7 cut(s) 163, 331, 786, 1048, 2012, 2171, 2619
AcuI CTGAAG 1 cut(s) 1164
AcyI GRCGYC 1 cut(s) 2561
AfaI GTAC 5 cut(s) 117, 253, 283, 2518, 2983
AfiI CCNNNNNNNGG 8 cut(s) 185, 431, 1154, 1242, 1549, 1772, 2671, 2753
AgeI ACCGGT 3 cut(s) 278, 1373, 2972
AhlI ACTAGT 1 cut(s) 445
AjnI CCWGG 2 cut(s) 337, 1126
AjuI GAANNNNNNNTTGG 2 cut(s) 2067, 2099
AloI GAACNNNNNNTCC 2 cut(s) 406, 438
Alw21I GWGCWC 1 cut(s) 328
Alw26I GTCTC 3 cut(s) 2017, 2421, 2960
AlwI GGATC 6 cut(s) 25, 170, 1720, 2738, 2943, 2956
AlwNI CAGNNNCTG 1 cut(s) 1133
Ama87I CYCGRG 1 cut(s) 1064
AoxI GGCC 9 cut(s) 244, 267, 1130, 1446, 1740, 2101, 2342, 2488, 2834
ApoI RAATTY 7 cut(s) 163, 331, 786, 1048, 2012, 2171, 2619
ArsI GACNNNNNNTTYG 2 cut(s) 1346, 1378
AseI ATTAAT 1 cut(s) 909
AsiGI ACCGGT 3 cut(s) 278, 1373, 2972
AspLEI GCGC 3 cut(s) 1599, 2303, 2563
AsuC2I CCSGG 2 cut(s) 1744, 1829
AsuHPI GGTGA 5 cut(s) 229, 646, 1114, 2866, 2939
AvaI CYCGRG 1 cut(s) 1064
AvaII GGWCC 7 cut(s) 770, 836, 1061, 1325, 1571, 1784, 2087
BaeGI GKGCMC 1 cut(s) 2704
BalI TGGCCA 2 cut(s) 1448, 2344
BamHI GGATCC 1 cut(s) 2948
BanI GGYRCC 2 cut(s) 2117, 2560
BanII GRGCYC 3 cut(s) 328, 2878, 3040
BarI GAAGNNNNNNTAC 2 cut(s) 2638, 2670
BauI CACGAG 1 cut(s) 2877
BbsI GAAGAC 3 cut(s) 32, 158, 551
Bbv12I GWGCWC 1 cut(s) 328
BbvCI CCTCAGC 1 cut(s) 965
BccI CCATC 7 cut(s) 42, 192, 425, 1072, 1493, 2108, 2798
BcgI CGANNNNNNTGC 4 cut(s) 1821, 1855, 2147, 2181
BciT130I CCWGG 2 cut(s) 339, 1128
BciVI GTATCC 1 cut(s) 1772
BclI TGATCA 1 cut(s) 289
BcnI CCSGG 2 cut(s) 1744, 1829
BcoDI GTCTC 3 cut(s) 2017, 2421, 2960
BcuI ACTAGT 1 cut(s) 445
BfaI CTAG 9 cut(s) 446, 585, 743, 756, 1434, 2492, 2532, 2732, 2738
BfmI CTRYAG 8 cut(s) 181, 1401, 1634, 1701, 1806, 1869, 1896, 2823
BfoI RGCGCY 1 cut(s) 2564
BfuAI ACCTGC 3 cut(s) 248, 1652, 2007
BfuI GTATCC 1 cut(s) 1772
BglI GCCNNNNNGGC 1 cut(s) 2350
BglII AGATCT 1 cut(s) 294
Bme1390I CCNGG 4 cut(s) 339, 1128, 1744, 1829
Bme18I GGWCC 7 cut(s) 770, 836, 1061, 1325, 1571, 1784, 2087
BmeT110I CYCGRG 1 cut(s) 1064
BmiI GGNNCC 7 cut(s) 415, 771, 1063, 1753, 2119, 2562, 2950
BmrFI CCNGG 4 cut(s) 339, 1128, 1744, 1829
BmrI ACTGGG 3 cut(s) 155, 633, 2707
BmsI GCATC 3 cut(s) 253, 2026, 2225
BmuI ACTGGG 3 cut(s) 155, 633, 2707
BpiI GAAGAC 3 cut(s) 32, 158, 551
BpmI CTGGAG 2 cut(s) 408, 573
Bpu10I CCTNAGC 1 cut(s) 965
BpuEI CTTGAG 4 cut(s) 192, 881, 913, 2041
BpuMI CCSGG 2 cut(s) 1744, 1829
BsaBI GATNNNNATC 3 cut(s) 887, 2460, 2789
BsaHI GRCGYC 1 cut(s) 2561
BsaI GGTCTC 1 cut(s) 2960
BsaJI CCNNGG 8 cut(s) 78, 563, 995, 1126, 1127, 1827, 2670, 2747
BsaWI WCCGGW 3 cut(s) 278, 1373, 2972
BsaXI ACNNNNNCTCC 6 cut(s) 406, 436, 1269, 1299, 1544, 1574
Bsc4I CCNNNNNNNGG 8 cut(s) 185, 431, 1154, 1242, 1549, 1772, 2671, 2753
Bse118I RCCGGY 4 cut(s) 278, 1154, 1373, 2972
Bse3DI GCAATG 1 cut(s) 2580
Bse8I GATNNNNATC 3 cut(s) 887, 2460, 2789
BseBI CCWGG 2 cut(s) 339, 1128
BseDI CCNNGG 8 cut(s) 78, 563, 995, 1126, 1127, 1827, 2670, 2747
BseGI GGATG 5 cut(s) 203, 417, 845, 1083, 2240
BseJI GATNNNNATC 3 cut(s) 887, 2460, 2789
BseLI CCNNNNNNNGG 8 cut(s) 185, 431, 1154, 1242, 1549, 1772, 2671, 2753
BseMI GCAATG 1 cut(s) 2580
BseMII CTCAG 5 cut(s) 311, 341, 366, 806, 979
BseRI GAGGAG 2 cut(s) 910, 1788
BseSI GKGCMC 1 cut(s) 2704
BsgI GTGCAG 2 cut(s) 1455, 1896
Bsh1236I CGCG 2 cut(s) 2301, 2840
BshFI GGCC 9 cut(s) 246, 269, 1132, 1448, 1742, 2103, 2344, 2490, 2836
BshNI GGYRCC 2 cut(s) 2117, 2560
BshTI ACCGGT 3 cut(s) 278, 1373, 2972
BsiHKAI GWGCWC 1 cut(s) 328
BsiHKCI CYCGRG 1 cut(s) 1064
BsiSI CCGG 6 cut(s) 279, 1155, 1374, 1743, 1829, 2973
BslFI GGGAC 2 cut(s) 783, 977
BslI CCNNNNNNNGG 8 cut(s) 185, 431, 1154, 1242, 1549, 1772, 2671, 2753
BsmAI GTCTC 3 cut(s) 2017, 2421, 2960
BsmFI GGGAC 2 cut(s) 783, 977
BsnI GGCC 9 cut(s) 246, 269, 1132, 1448, 1742, 2103, 2344, 2490, 2836
Bso31I GGTCTC 1 cut(s) 2960
BsoBI CYCGRG 1 cut(s) 1064
Bsp1286I GDGCHC 4 cut(s) 328, 2704, 2878, 3040
Bsp1407I TGTACA 1 cut(s) 251
BspACI CCGC 9 cut(s) 186, 243, 266, 472, 1550, 1797, 2578, 2643, 2838
BspANI GGCC 9 cut(s) 246, 269, 1132, 1448, 1742, 2103, 2344, 2490, 2836
BspCNI CTCAG 5 cut(s) 312, 340, 365, 807, 978
BspFNI CGCG 2 cut(s) 2301, 2840
BspLI GGNNCC 7 cut(s) 415, 771, 1063, 1753, 2119, 2562, 2950
BspMAI CTGCAG 5 cut(s) 185, 1638, 1705, 1900, 2827
BspMI ACCTGC 3 cut(s) 248, 1652, 2007
BspPI GGATC 6 cut(s) 25, 170, 1720, 2738, 2943, 2956
BspQI GCTCTTC 1 cut(s) 1183
BspT107I GGYRCC 2 cut(s) 2117, 2560
BspTNI GGTCTC 1 cut(s) 2960
BsrDI GCAATG 1 cut(s) 2580
BsrFI RCCGGY 4 cut(s) 278, 1154, 1373, 2972
BsrGI TGTACA 1 cut(s) 251
BssAI RCCGGY 4 cut(s) 278, 1154, 1373, 2972
BssECI CCNNGG 8 cut(s) 78, 563, 995, 1126, 1127, 1827, 2670, 2747
BssNAI GTATAC 1 cut(s) 1248
BssNI GRCGYC 1 cut(s) 2561
BssSI CACGAG 1 cut(s) 2877
BssT1I CCWWGG 5 cut(s) 78, 563, 995, 2670, 2747
Bst1107I GTATAC 1 cut(s) 1248
Bst2BI CACGAG 1 cut(s) 2877
Bst2UI CCWGG 2 cut(s) 339, 1128
Bst4CI ACNGT 9 cut(s) 1193, 1285, 1397, 1440, 1534, 2291, 2409, 2666, 3078
Bst6I CTCTTC 2 cut(s) 1183, 2670
BstACI GRCGYC 1 cut(s) 2561
BstAUI TGTACA 1 cut(s) 251
BstC8I GCNNGC 9 cut(s) 23, 501, 1156, 1174, 1474, 2105, 2838, 2861, 3011
BstDEI CTNAG 7 cut(s) 320, 327, 352, 815, 965, 1955, 2831
BstENI CCTNNNNNAGG 1 cut(s) 1770
BstF5I GGATG 5 cut(s) 203, 417, 845, 1083, 2240
BstFNI CGCG 2 cut(s) 2301, 2840
BstH2I RGCGCY 1 cut(s) 2564
BstHHI GCGC 3 cut(s) 1599, 2303, 2563
BstMAI GTCTC 3 cut(s) 2017, 2421, 2960
BstNI CCWGG 2 cut(s) 339, 1128
BstNSI RCATGY 1 cut(s) 2863
BstSCI CCNGG 4 cut(s) 337, 1126, 1742, 1827
BstSFI CTRYAG 8 cut(s) 181, 1401, 1634, 1701, 1806, 1869, 1896, 2823
BstSLI GKGCMC 1 cut(s) 2704
BstUI CGCG 2 cut(s) 2301, 2840
BstV2I GAAGAC 3 cut(s) 32, 158, 551
BstX2I RGATCY 3 cut(s) 294, 1725, 2948
BstXI CCANNNNNNTGG 1 cut(s) 2797
BstYI RGATCY 3 cut(s) 294, 1725, 2948
BstZ17I GTATAC 1 cut(s) 1248
BsuI GTATCC 1 cut(s) 1772
BsuRI GGCC 9 cut(s) 246, 269, 1132, 1448, 1742, 2103, 2344, 2490, 2836
BtgZI GCGATG 1 cut(s) 2855
BtsCI GGATG 5 cut(s) 203, 417, 845, 1083, 2240
BtsI GCAGTG 2 cut(s) 1884, 2820
BtsIMutI CAGTG 6 cut(s) 143, 175, 1755, 1884, 2296, 2820
BveI ACCTGC 3 cut(s) 248, 1652, 2007
Cac8I GCNNGC 9 cut(s) 23, 501, 1156, 1174, 1474, 2105, 2838, 2861, 3011
CaiI CAGNNNCTG 1 cut(s) 1133
CfoI GCGC 3 cut(s) 1599, 2303, 2563
Cfr10I RCCGGY 4 cut(s) 278, 1154, 1373, 2972
CseI GACGC 1 cut(s) 2307
Csp6I GTAC 5 cut(s) 116, 252, 282, 2517, 2982
CspAI ACCGGT 3 cut(s) 278, 1373, 2972
CviAII CATG 9 cut(s) 940, 1342, 1465, 2191, 2278, 2396, 2860, 2999, 3014
CviQI GTAC 5 cut(s) 116, 252, 282, 2517, 2982
DdeI CTNAG 7 cut(s) 320, 327, 352, 815, 965, 1955, 2831
DinI GGCGCC 1 cut(s) 2562
DraI TTTAAA 1 cut(s) 1986
EaeI YGGCCR 4 cut(s) 244, 267, 1446, 2342
Eam1104I CTCTTC 2 cut(s) 1183, 2670
EarI CTCTTC 2 cut(s) 1183, 2670
EciI GGCGGA 1 cut(s) 1786
Ecl136II GAGCTC 1 cut(s) 326
Eco130I CCWWGG 5 cut(s) 78, 563, 995, 2670, 2747
Eco24I GRGCYC 3 cut(s) 328, 2878, 3040
Eco31I GGTCTC 1 cut(s) 2960
Eco32I GATATC 1 cut(s) 2478
Eco47I GGWCC 7 cut(s) 770, 836, 1061, 1325, 1571, 1784, 2087
Eco53kI GAGCTC 1 cut(s) 326
Eco57I CTGAAG 1 cut(s) 1164
Eco88I CYCGRG 1 cut(s) 1064
EcoICRI GAGCTC 1 cut(s) 326
EcoNI CCTNNNNNAGG 1 cut(s) 1770
EcoO109I RGGNCCY 1 cut(s) 1130
EcoRI GAATTC 1 cut(s) 2619
EcoRII CCWGG 2 cut(s) 337, 1126
EcoRV GATATC 1 cut(s) 2478
EcoT14I CCWWGG 5 cut(s) 78, 563, 995, 2670, 2747
EcoT38I GRGCYC 3 cut(s) 328, 2878, 3040
EgeI GGCGCC 1 cut(s) 2562
EheI GGCGCC 1 cut(s) 2562
ErhI CCWWGG 5 cut(s) 78, 563, 995, 2670, 2747
FaeI CATG 9 cut(s) 943, 1345, 1468, 2194, 2281, 2399, 2863, 3002, 3017
FaqI GGGAC 2 cut(s) 783, 977
FatI CATG 9 cut(s) 939, 1341, 1464, 2190, 2277, 2395, 2859, 2998, 3013
FauI CCCGC 2 cut(s) 2571, 2845
FauNDI CATATG 1 cut(s) 1300
FbaI TGATCA 1 cut(s) 289
FblI GTMKAC 3 cut(s) 1247, 1421, 2268
FokI GGATG 5 cut(s) 210, 404, 832, 1090, 2247
FriOI GRGCYC 3 cut(s) 328, 2878, 3040
FspBI CTAG 9 cut(s) 446, 585, 743, 756, 1434, 2492, 2532, 2732, 2738
GlaI GCGC 3 cut(s) 1598, 2302, 2562
GsuI CTGGAG 2 cut(s) 408, 573
HaeII RGCGCY 1 cut(s) 2564
HaeIII GGCC 9 cut(s) 246, 269, 1132, 1448, 1742, 2103, 2344, 2490, 2836
HapII CCGG 6 cut(s) 279, 1155, 1374, 1743, 1829, 2973
HgaI GACGC 1 cut(s) 2307
HhaI GCGC 3 cut(s) 1599, 2303, 2563
Hin1I GRCGYC 1 cut(s) 2561
Hin1II CATG 9 cut(s) 943, 1345, 1468, 2194, 2281, 2399, 2863, 3002, 3017
Hin6I GCGC 3 cut(s) 1597, 2301, 2561
HinP1I GCGC 3 cut(s) 1597, 2301, 2561
HincII GTYRAC 4 cut(s) 451, 951, 1288, 1996
HindII GTYRAC 4 cut(s) 451, 951, 1288, 1996
HindIII AAGCTT 2 cut(s) 120, 2498
HinfI GANTC 5 cut(s) 576, 748, 842, 2402, 2900
HpaI GTTAAC 1 cut(s) 451
HpaII CCGG 6 cut(s) 279, 1155, 1374, 1743, 1829, 2973
HphI GGTGA 5 cut(s) 229, 646, 1114, 2866, 2939
HpyAV CCTTC 9 cut(s) 121, 789, 1338, 1587, 2069, 2240, 2640, 2861, 2997
HpyCH4III ACNGT 9 cut(s) 1193, 1285, 1397, 1440, 1534, 2291, 2409, 2666, 3078
HpyCH4IV ACGT 3 cut(s) 234, 303, 1718
HpyF3I CTNAG 7 cut(s) 320, 327, 352, 815, 965, 1955, 2831
HpySE526I ACGT 3 cut(s) 234, 303, 1718
Hsp92I GRCGYC 1 cut(s) 2561
Hsp92II CATG 9 cut(s) 943, 1345, 1468, 2194, 2281, 2399, 2863, 3002, 3017
HspAI GCGC 3 cut(s) 1597, 2301, 2561
KasI GGCGCC 1 cut(s) 2560
KroI GCCGGC 1 cut(s) 1154
KroNI GCCGGC 1 cut(s) 1156
Ksp22I TGATCA 1 cut(s) 289
KspAI GTTAAC 1 cut(s) 451
LguI GCTCTTC 1 cut(s) 1183
LmnI GCTCC 5 cut(s) 89, 999, 1015, 1667, 1975
LweI GCATC 3 cut(s) 253, 2026, 2225
MaeI CTAG 9 cut(s) 446, 585, 743, 756, 1434, 2492, 2532, 2732, 2738
MaeII ACGT 3 cut(s) 234, 303, 1718
MaeIII GTNAC 6 cut(s) 235, 398, 1279, 1376, 1705, 2954
MflI RGATCY 3 cut(s) 294, 1725, 2948
MhlI GDGCHC 4 cut(s) 328, 2704, 2878, 3040
MlsI TGGCCA 2 cut(s) 1448, 2344
MluNI TGGCCA 2 cut(s) 1448, 2344
Mly113I GGCGCC 1 cut(s) 2561
MmeI TCCRAC 9 cut(s) 403, 445, 960, 1037, 1598, 1701, 1864, 2085, 2275
Mox20I TGGCCA 2 cut(s) 1448, 2344
MroNI GCCGGC 1 cut(s) 1154
MscI TGGCCA 2 cut(s) 1448, 2344
MslI CAYNNNNRTG 2 cut(s) 1628, 2795
Msp20I TGGCCA 2 cut(s) 1448, 2344
MspA1I CMGCKG 4 cut(s) 107, 186, 1199, 2643
MspI CCGG 6 cut(s) 279, 1155, 1374, 1743, 1829, 2973
MspR9I CCNGG 4 cut(s) 339, 1128, 1744, 1829
MvaI CCWGG 2 cut(s) 339, 1128
MvnI CGCG 2 cut(s) 2301, 2840
NaeI GCCGGC 1 cut(s) 1156
NarI GGCGCC 1 cut(s) 2561
NciI CCSGG 2 cut(s) 1744, 1829
NdeI CATATG 1 cut(s) 1300
NgoMIV GCCGGC 1 cut(s) 1154
NlaIII CATG 9 cut(s) 943, 1345, 1468, 2194, 2281, 2399, 2863, 3002, 3017
NlaIV GGNNCC 7 cut(s) 415, 771, 1063, 1753, 2119, 2562, 2950
NmuCI GTSAC 1 cut(s) 235
NspI RCATGY 1 cut(s) 2863
PaeI GCATGC 1 cut(s) 2863
PaqCI CACCTGC 2 cut(s) 248, 1652
PasI CCCWGGG 1 cut(s) 1127
PciSI GCTCTTC 1 cut(s) 1183
PdiI GCCGGC 1 cut(s) 1156
PfeI GAWTC 5 cut(s) 576, 748, 842, 2402, 2900
PflFI GACNNNGTC 1 cut(s) 2738
PflMI CCANNNNNTGG 1 cut(s) 1242
PinAI ACCGGT 3 cut(s) 278, 1373, 2972
PluTI GGCGCC 1 cut(s) 2564
PshBI ATTAAT 1 cut(s) 909
Psp124BI GAGCTC 1 cut(s) 328
Psp6I CCWGG 2 cut(s) 337, 1126
PspGI CCWGG 2 cut(s) 337, 1126
PspN4I GGNNCC 7 cut(s) 415, 771, 1063, 1753, 2119, 2562, 2950
PstI CTGCAG 5 cut(s) 185, 1638, 1705, 1900, 2827
PstNI CAGNNNCTG 1 cut(s) 1133
PsuI RGATCY 3 cut(s) 294, 1725, 2948
PsyI GACNNNGTC 1 cut(s) 2738
PvuII CAGCTG 2 cut(s) 107, 1199
RsaI GTAC 5 cut(s) 117, 253, 283, 2518, 2983
RsaNI GTAC 5 cut(s) 116, 252, 282, 2517, 2982
RseI CAYNNNNRTG 2 cut(s) 1628, 2795
SacI GAGCTC 1 cut(s) 328
SapI GCTCTTC 1 cut(s) 1183
ScrFI CCNGG 4 cut(s) 339, 1128, 1744, 1829
SduI GDGCHC 4 cut(s) 328, 2704, 2878, 3040
SfaNI GCATC 3 cut(s) 253, 2026, 2225
SfcI CTRYAG 8 cut(s) 181, 1401, 1634, 1701, 1806, 1869, 1896, 2823
SfoI GGCGCC 1 cut(s) 2562
SgrAI CRCCGGYG 1 cut(s) 2972
SinI GGWCC 7 cut(s) 770, 836, 1061, 1325, 1571, 1784, 2087
SmiMI CAYNNNNRTG 2 cut(s) 1628, 2795
SmlI CTYRAG 4 cut(s) 207, 860, 892, 2020
SmoI CTYRAG 4 cut(s) 207, 860, 892, 2020
SpeI ACTAGT 1 cut(s) 445
SphI GCATGC 1 cut(s) 2863
SsiI CCGC 9 cut(s) 186, 243, 266, 472, 1550, 1797, 2578, 2643, 2838
SspDI GGCGCC 1 cut(s) 2560
SspI AATATT 3 cut(s) 508, 929, 1648
SspMI CTAG 9 cut(s) 446, 585, 743, 756, 1434, 2492, 2532, 2732, 2738
SstI GAGCTC 1 cut(s) 328
StyD4I CCNGG 4 cut(s) 337, 1126, 1742, 1827
StyI CCWWGG 5 cut(s) 78, 563, 995, 2670, 2747
TaaI ACNGT 9 cut(s) 1193, 1285, 1397, 1440, 1534, 2291, 2409, 2666, 3078
TaiI ACGT 3 cut(s) 237, 306, 1721
TaqI TCGA 2 cut(s) 856, 2742
TatI WGTACW 3 cut(s) 115, 251, 2981
TauI GCSGC 2 cut(s) 246, 269
TfiI GAWTC 5 cut(s) 576, 748, 842, 2402, 2900
TscAI CASTG 6 cut(s) 150, 175, 1762, 1884, 2296, 2827
TseFI GTSAC 1 cut(s) 235
Tsp45I GTSAC 1 cut(s) 235
TspGWI ACGGA 2 cut(s) 1305, 1718
TspRI CASTG 6 cut(s) 150, 175, 1762, 1884, 2296, 2827
Tth111I GACNNNGTC 1 cut(s) 2738
Van91I CCANNNNNTGG 1 cut(s) 1242
VpaK11BI GGWCC 7 cut(s) 770, 836, 1061, 1325, 1571, 1784, 2087
VspI ATTAAT 1 cut(s) 909
XagI CCTNNNNNAGG 1 cut(s) 1770
XapI RAATTY 7 cut(s) 163, 331, 786, 1048, 2012, 2171, 2619
XbaI TCTAGA 1 cut(s) 1433
XceI RCATGY 1 cut(s) 2863
XcmI CCANNNNNNNNNTGG 3 cut(s) 1155, 2111, 2959
XmiI GTMKAC 3 cut(s) 1247, 1421, 2268
XspI CTAG 9 cut(s) 446, 585, 743, 756, 1434, 2492, 2532, 2732, 2738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.