Rh5CG230400

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
23919295 .. 23929976
10682 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG230400.1

Sequence Viewer

Length: 3078 bp
ATGAACAACTACATGCTGTTGATCCATCGGCTTCTGGTTCATTCTCTCCTGCTACTTTGCTTTGCAACCTTGGCTTTCGGAGCTAATCGATTATCAGCCGATGAAGTACACGCTTTGAAGGACATAGCAAAAACACTGGGGAAGACAAACTGGAATTTTAGTGCTGATCCATGCAGCGGAGAATATGGATGGATTACTCAAGCCGACAAATATTTTGCGAATAACGTCACCTGCGGCAATTGTACGACTTCCGATGCGGCCAATGACACCAGAACTGATCAGATCTGCCATGTTGTTAGCATACTTCTGAGAGCTCAGAATTTGCCAGGAACACTTCCGTCAGAGTTGGCAAGGCTTCCCTATCTCCAACAAATTGACCTCGCCCGTAACTATCTGAATGGAACCATCCCTCCTCAATGGGGCTCCCTGCCACTAGTTAACATTTCTCTTGTTGGAAACCGCTTGACAGGTTCTATCCCCGTTGAGCTTGCAAATATTACCACCCTGAAAAGTTTGACCATGGATTTCAATTATTTCTCTGGAGGTCTTCCTTGGGAACTTGGATTTTTGCCGAGCATAGAAACACTCATTCTTACCTCGAACAATTTTACTGGGGAGTTGCCGGATACATTTGCAAAGCTTACCAAATTAAAAGACTTTCGGATTATTGACAATTCCTTTTCTGGGAAGATACCAAATTATATTCAAAACTGGACAAATCTTCACAAACTAGGGATTCAGGCTAGTGGTTTGACCGGACCAATTCCTTCTGGAATTTCTCTCTTGACAAGTTTAACTGACCTGAGAATTACTGACTTGAATGGACCTGAATCATCCTTTCCTCTACTTGAGGATATGAAAAACTTGAAGATACTGATGTTGAGGAGTTGCAATATTAATGGACAGCTACCAGAATATTTTTCGTACATGACAGAGTTGACAACTTTAGACCTAAGCTTCAACAAGCTAACTGGAAAAGTCCCAAGGAGCTTTGTTGCTCCAACGAATAATTTGGATTACATATTCTTAACTGGAAATTTGCTGAATGGATCTGAGCCTCTGTGGATGGTAGGAGAAAACGTTGATCTTTCATATAACAATTTCACTATCACCTCAGGGCCTGTAAATTGTCAGCCACAAGCCGGCTGGAACTTGTTTTCAAGCTCTTCAAAGGGCAACAGTTCAGCTGTTTCATGTTTGAGCAATAAAACTACAACATGTTCAAAAAGATGGTACTCTCTCAATATAAATTGTGGAGGAAGTGGAGTAACAATTGATGGAACAACATATGATGAGGATACAGTTGCAAATGGACCTTCATCATATTATATGAGCAGCACAAATTGGGTGTCAAGCAGCACTGGTTACTTCCCTGATGATGACAGTTCTACAGACCACTTTACTTGGTCCAATAATTCATCTAGACTCTCTATGGTCAATGGTCAACTATACACGACTGCTCGCCTTTCTCCCATCTCTCTAACTTATTATGGGTTTTGCCTGCTGAATGGAAACTACACAGTAAACCTCCATTTTGCAGAGATAATGTTTACAAATGGTCCAACATATAGCAGCTTGGGAAGGCGCATATTTGATGTTTACATTCAGGGCATACGAGTGCTGAAGGATTTCAATATTGCAGATGAGGCAGGTGGGGCTGGTAAGGCAGTCATAAAAGAGTATATTGCTGCTGTAACTACTAATACCTTGGAGATCAGTTTCTTTTGGGCTGGGAAAGGAACCACAGGTCTCCCTGTAAGAGGAGTTTATGGTCCTCTTATCTCCGCCATATCTGTGGTTCCAGCAGACTTTGAACCCCCTGCAGAAACCCCGTCAGGACCCATATCAATGAGGTTATCTATAGGTGCAGTGGTTGGAAGTATGGCTGCAGGGGGAGTATTACTTGTATTGCTGATTTTGGGTTATCTTTGGTGGAGAGGCTATCTAAGACGAGAAAGGACTTTGGAGCAAGATTTAAAAGGAGTTGACCTGCAAACGGGTAGATTTAGCTTGAGACAAATCAAAGATGCCACAGGAAACTTTGACATAGCCAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCCAACTATCAGATGGCACTGTAATTGCTGTTAAGCAACTTTCTGCCAAATCAAAGCAAGGAAATCGTGAATTTGTGAATGAGATTGGCATGATTTCTTCTCTGCAACACCCTCATCTTGTCAAGCTCTATGGATGCTGCATTGAAGGAAATCAGTTGTTGCTTGTCTATGAGTACATGGAAAATAACAGTGTTGGACGTGCCTTGTTTGGTGCAAAAGAAAGTCAGTTGAAGTTAGATTGGTCAACAAGGCACAGGATTTGTGTTGGTATAGCAAAATGTTTGGCTTACCTTCATGAAGAATCACGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTACCCTAAGATTTCTGACTTTGGCCTAGCCAAGCTTGTTGAAGATGATAGTACCCATATAAGCACTAGGATTGCTGGAACTCATGGATATATGGCACCTGAATATGCAATGCGGGGTTATCTGACTGATAAAGCAGATGTGTATAGTTTTGGAATTCTTGTGTTGGAAATGGTCAGTGGAAGGTGCAACACAACTTACCACTCCAAGGGAGAGTGCTTCTACATTCTTGATTGGGCACTTCTTCTAAAAGAGAAAGGAAGTTTGTTAGACCTAGTCGATCCAAGGTTGGGCTCAGATTTTAACAAAGAAGACGTGATGATTACCATCAATGTGGCTCTCCTTTGCTGTAATGTCTCTGCAGCACTTAGGCCTGCCATGTCTTCAGTGGTGAGCATGCTTGAAGGTAGGGCTCGTGTTGAGGAATTAGTCTTAGATTCAAGTGCCTCATCTCATGAGATCAGTGAAACAAGGAAACATTTTGAGTCCAATTACTCATTGGAGACCATCGCTGGGAGTACTCAGAGACAAATGATGTCAATCGAAGAGGCATGCACTTCACCGACATCTGTTCAAGATCATCCAATCAATCCTCATTCAGATTACTGGGAGAACAGAAATTAA

Protein Analysis

1025

Amino Acids

112.84

Weight (kDa)

5.87

Isoelectric Point (pI)

33.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 163 - 270 3.2e-06 Leucine-rich repeat region
LRR_8 PF13855 288 - 348 7e-08 Leucine rich repeat
Malectin PF11721 413 - 597 7.1e-43 Malectin domain
PK_Tyr_Ser-Thr PF07714 683 - 880 4.2e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 683 - 881 1.1e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 239, 1640
Acc36I ACCTGC 3 cut(s) 239, 1640, 1998
AccB1I GGYRCC 1 cut(s) 2551
AciI CCGC 6 cut(s) 177, 234, 257, 460, 1785, 2569
AclI AACGTT 1 cut(s) 1080
AclWI GGATC 4 cut(s) 16, 161, 1057, 2729
AcoI YGGCCR 1 cut(s) 258
AcsI RAATTY 6 cut(s) 154, 319, 774, 1036, 2162, 2610
AcuI CTGAAG 2 cut(s) 1643, 2823
AfaI GTAC 7 cut(s) 108, 244, 926, 1235, 2267, 2509, 2974
AfiI CCNNNNNNNGG 9 cut(s) 176, 419, 684, 1142, 1760, 1996, 2662, 2744, 2967
AflIII ACRYGT 1 cut(s) 1217
AhlI ACTAGT 1 cut(s) 433
AjiI CACGTC 2 cut(s) 2291, 2770
AjnI CCWGG 1 cut(s) 325
AjuI GAANNNNNNNTTGG 2 cut(s) 2058, 2090
AloI GAACNNNNNNTCC 2 cut(s) 394, 426
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 6 cut(s) 1754, 2008, 2412, 2815, 2951, 2974
AlwI GGATC 4 cut(s) 16, 161, 1057, 2729
AlwNI CAGNNNCTG 1 cut(s) 1121
AoxI GGCC 5 cut(s) 258, 1118, 2092, 2479, 2825
ApeKI GCWGC 8 cut(s) 174, 1335, 1356, 1572, 1688, 1886, 2229, 2816
ApoI RAATTY 6 cut(s) 154, 319, 774, 1036, 2162, 2610
ArsI GACNNNNNNTTYG 4 cut(s) 197, 229, 1334, 1366
AseI ATTAAT 1 cut(s) 897
Asp700I GAANNNNTTC 1 cut(s) 1628
AspLEI GCGC 1 cut(s) 1587
AsuHPI GGTGA 4 cut(s) 220, 1102, 2857, 3006
AvaII GGWCC 8 cut(s) 758, 824, 1313, 1407, 1559, 1772, 1838, 2078
AxyI CCTNAGG 1 cut(s) 1114
BaeGI GKGCMC 1 cut(s) 2695
BaeI ACNNNNGTAYC 2 cut(s) 863, 896
BanI GGYRCC 1 cut(s) 2551
BanII GRGCYC 4 cut(s) 316, 425, 2750, 2869
BauI CACGAG 1 cut(s) 2868
BbsI GAAGAC 4 cut(s) 149, 539, 2772, 2829
Bbv12I GWGCWC 1 cut(s) 316
BbvI GCAGC 8 cut(s) 186, 1347, 1368, 1584, 1675, 1873, 2216, 2828
BcgI CGANNNNNNTGC 2 cut(s) 2138, 2172
BciT130I CCWGG 1 cut(s) 327
BciVI GTATCC 2 cut(s) 619, 1291
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 6 cut(s) 1754, 2008, 2412, 2815, 2951, 2974
BcuI ACTAGT 1 cut(s) 433
BfaI CTAG 7 cut(s) 434, 731, 744, 1422, 2483, 2523, 2729
BfmI CTRYAG 5 cut(s) 1389, 1821, 1860, 1887, 2814
BfuAI ACCTGC 3 cut(s) 239, 1640, 1998
BfuI GTATCC 2 cut(s) 619, 1291
BglII AGATCT 1 cut(s) 282
BmcAI AGTACT 1 cut(s) 2974
Bme1390I CCNGG 1 cut(s) 327
Bme18I GGWCC 8 cut(s) 758, 824, 1313, 1407, 1559, 1772, 1838, 2078
BmgBI CACGTC 2 cut(s) 2291, 2770
BmiI GGNNCC 6 cut(s) 403, 424, 1741, 1800, 1840, 2553
BmrFI CCNGG 1 cut(s) 327
BmrI ACTGGG 3 cut(s) 146, 621, 3070
BmsI GCATC 3 cut(s) 244, 2017, 2216
BmuI ACTGGG 3 cut(s) 146, 621, 3070
BpiI GAAGAC 4 cut(s) 149, 539, 2772, 2829
BpmI CTGGAG 1 cut(s) 561
Bpu10I CCTNAGC 1 cut(s) 953
BpuEI CTTGAG 3 cut(s) 183, 869, 2032
Bsa29I ATCGAT 1 cut(s) 88
BsaBI GATNNNNATC 3 cut(s) 2451, 2780, 2993
BsaI GGTCTC 2 cut(s) 1754, 2951
BsaJI CCNNGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
BsaWI WCCGGW 1 cut(s) 755
BsaXI ACNNNNNCTCC 4 cut(s) 394, 424, 1065, 1095
Bsc4I CCNNNNNNNGG 9 cut(s) 176, 419, 684, 1142, 1760, 1996, 2662, 2744, 2967
Bse118I RCCGGY 1 cut(s) 1142
Bse1I ACTGG 8 cut(s) 141, 155, 616, 716, 976, 1036, 1366, 3065
Bse21I CCTNAGG 1 cut(s) 1114
Bse3DI GCAATG 1 cut(s) 2571
Bse8I GATNNNNATC 3 cut(s) 2451, 2780, 2993
BseBI CCWGG 1 cut(s) 327
BseCI ATCGAT 1 cut(s) 88
BseDI CCNNGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
BseGI GGATG 6 cut(s) 194, 405, 833, 1071, 2231, 3034
BseJI GATNNNNATC 3 cut(s) 2451, 2780, 2993
BseLI CCNNNNNNNGG 9 cut(s) 176, 419, 684, 1142, 1760, 1996, 2662, 2744, 2967
BseMI GCAATG 1 cut(s) 2571
BseMII CTCAG 7 cut(s) 299, 329, 794, 1044, 1128, 2763, 2990
BseNI ACTGG 8 cut(s) 141, 155, 616, 716, 976, 1036, 1366, 3065
BseRI GAGGAG 3 cut(s) 402, 898, 1776
BseSI GKGCMC 1 cut(s) 2695
BseXI GCAGC 8 cut(s) 186, 1347, 1368, 1584, 1675, 1873, 2216, 2828
BseYI CCCAGC 2 cut(s) 1730, 2966
BsgI GTGCAG 1 cut(s) 1887
BshFI GGCC 5 cut(s) 260, 1120, 2094, 2481, 2827
BshNI GGYRCC 1 cut(s) 2551
BshVI ATCGAT 1 cut(s) 88
BsiHKAI GWGCWC 1 cut(s) 316
BsiSI CCGG 3 cut(s) 623, 756, 1143
BslFI GGGAC 1 cut(s) 965
BslI CCNNNNNNNGG 9 cut(s) 176, 419, 684, 1142, 1760, 1996, 2662, 2744, 2967
BsmAI GTCTC 6 cut(s) 1754, 2008, 2412, 2815, 2951, 2974
BsmFI GGGAC 1 cut(s) 965
BsnI GGCC 5 cut(s) 260, 1120, 2094, 2481, 2827
Bso31I GGTCTC 2 cut(s) 1754, 2951
Bsp1286I GDGCHC 5 cut(s) 316, 425, 2695, 2750, 2869
Bsp19I CCATGG 1 cut(s) 519
BspACI CCGC 6 cut(s) 177, 234, 257, 460, 1785, 2569
BspANI GGCC 5 cut(s) 260, 1120, 2094, 2481, 2827
BspCNI CTCAG 7 cut(s) 300, 328, 795, 1045, 1127, 2762, 2989
BspDI ATCGAT 1 cut(s) 88
BspHI TCATGA 2 cut(s) 2386, 2908
BspLI GGNNCC 6 cut(s) 403, 424, 1741, 1800, 1840, 2553
BspMAI CTGCAG 3 cut(s) 1825, 1891, 2818
BspMI ACCTGC 3 cut(s) 239, 1640, 1998
BspPI GGATC 4 cut(s) 16, 161, 1057, 2729
BspQI GCTCTTC 1 cut(s) 1171
BspT107I GGYRCC 1 cut(s) 2551
BspTNI GGTCTC 2 cut(s) 1754, 2951
BsrDI GCAATG 1 cut(s) 2571
BsrFI RCCGGY 1 cut(s) 1142
BsrI ACTGG 8 cut(s) 141, 155, 616, 716, 976, 1036, 1366, 3065
BssAI RCCGGY 1 cut(s) 1142
BssECI CCNNGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
BssSI CACGAG 1 cut(s) 2868
BssT1I CCWWGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
Bst2BI CACGAG 1 cut(s) 2868
Bst2UI CCWGG 1 cut(s) 327
Bst4CI ACNGT 7 cut(s) 1181, 1303, 1385, 1522, 2113, 2282, 2400
Bst6I CTCTTC 2 cut(s) 1171, 2994
BstC8I GCNNGC 7 cut(s) 489, 1144, 1462, 1502, 2829, 2852, 3007
BstDSI CCRYGG 1 cut(s) 519
BstENI CCTNNNNNAGG 1 cut(s) 1758
BstF5I GGATG 6 cut(s) 194, 405, 833, 1071, 2231, 3034
BstHHI GCGC 1 cut(s) 1587
BstMAI GTCTC 6 cut(s) 1754, 2008, 2412, 2815, 2951, 2974
BstMWI GCNNNNNNNGC 5 cut(s) 71, 80, 1646, 1655, 1664
BstNI CCWGG 1 cut(s) 327
BstNSI RCATGY 4 cut(s) 16, 1221, 2854, 3009
BstSCI CCNGG 1 cut(s) 325
BstSFI CTRYAG 5 cut(s) 1389, 1821, 1860, 1887, 2814
BstSLI GKGCMC 1 cut(s) 2695
BstV1I GCAGC 8 cut(s) 186, 1347, 1368, 1584, 1675, 1873, 2216, 2828
BstV2I GAAGAC 4 cut(s) 149, 539, 2772, 2829
BstX2I RGATCY 2 cut(s) 282, 1049
BstXI CCANNNNNNTGG 2 cut(s) 1795, 2788
BstYI RGATCY 2 cut(s) 282, 1049
Bsu15I ATCGAT 1 cut(s) 88
Bsu36I CCTNAGG 1 cut(s) 1114
BsuI GTATCC 2 cut(s) 619, 1291
BsuRI GGCC 5 cut(s) 260, 1120, 2094, 2481, 2827
BsuTUI ATCGAT 1 cut(s) 88
BtgI CCRYGG 1 cut(s) 519
BtgZI GCGATG 1 cut(s) 2947
BtrI CACGTC 2 cut(s) 2291, 2770
BtsCI GGATG 6 cut(s) 194, 405, 833, 1071, 2231, 3034
BtsI GCAGTG 1 cut(s) 1875
BtsIMutI CAGTG 8 cut(s) 134, 1359, 1875, 2109, 2287, 2638, 2847, 2923
BveI ACCTGC 3 cut(s) 239, 1640, 1998
Cac8I GCNNGC 7 cut(s) 489, 1144, 1462, 1502, 2829, 2852, 3007
CaiI CAGNNNCTG 1 cut(s) 1121
CciI TCATGA 2 cut(s) 2386, 2908
CfoI GCGC 1 cut(s) 1587
Cfr10I RCCGGY 1 cut(s) 1142
ClaI ATCGAT 1 cut(s) 88
Csp6I GTAC 7 cut(s) 107, 243, 925, 1234, 2266, 2508, 2973
CspCI CAANNNNNGTGG 2 cut(s) 1385, 1420
CviQI GTAC 7 cut(s) 107, 243, 925, 1234, 2266, 2508, 2973
DraI TTTAAA 1 cut(s) 1977
EaeI YGGCCR 1 cut(s) 258
Eam1104I CTCTTC 2 cut(s) 1171, 2994
EarI CTCTTC 2 cut(s) 1171, 2994
EciI GGCGGA 1 cut(s) 1774
Ecl136II GAGCTC 1 cut(s) 314
Eco130I CCWWGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
Eco147I AGGCCT 1 cut(s) 2827
Eco24I GRGCYC 4 cut(s) 316, 425, 2750, 2869
Eco31I GGTCTC 2 cut(s) 1754, 2951
Eco47I GGWCC 8 cut(s) 758, 824, 1313, 1407, 1559, 1772, 1838, 2078
Eco53kI GAGCTC 1 cut(s) 314
Eco57I CTGAAG 2 cut(s) 1643, 2823
Eco81I CCTNAGG 1 cut(s) 1114
EcoICRI GAGCTC 1 cut(s) 314
EcoNI CCTNNNNNAGG 1 cut(s) 1758
EcoO109I RGGNCCY 2 cut(s) 1118, 1838
EcoRI GAATTC 1 cut(s) 2610
EcoRII CCWGG 1 cut(s) 325
EcoT14I CCWWGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
EcoT38I GRGCYC 4 cut(s) 316, 425, 2750, 2869
ErhI CCWWGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
FaqI GGGAC 1 cut(s) 965
FauI CCCGC 1 cut(s) 2562
FauNDI CATATG 1 cut(s) 1288
FbaI TGATCA 1 cut(s) 277
FokI GGATG 6 cut(s) 201, 392, 820, 1078, 2238, 3021
FriOI GRGCYC 4 cut(s) 316, 425, 2750, 2869
FspBI CTAG 7 cut(s) 434, 731, 744, 1422, 2483, 2523, 2729
GlaI GCGC 1 cut(s) 1586
GsaI CCCAGC 2 cut(s) 1734, 2970
GsuI CTGGAG 1 cut(s) 561
HaeIII GGCC 5 cut(s) 260, 1120, 2094, 2481, 2827
HapII CCGG 3 cut(s) 623, 756, 1143
HhaI GCGC 1 cut(s) 1587
Hin6I GCGC 1 cut(s) 1585
HinP1I GCGC 1 cut(s) 1585
HincII GTYRAC 5 cut(s) 439, 939, 1445, 1987, 2337
HindII GTYRAC 5 cut(s) 439, 939, 1445, 1987, 2337
HindIII AAGCTT 3 cut(s) 638, 955, 2489
HinfI GANTC 6 cut(s) 736, 830, 1425, 2393, 2891, 2939
HpaI GTTAAC 1 cut(s) 439
HpaII CCGG 3 cut(s) 623, 756, 1143
HphI GGTGA 4 cut(s) 220, 1102, 2857, 3006
HpyCH4III ACNGT 7 cut(s) 1181, 1303, 1385, 1522, 2113, 2282, 2400
HpyCH4IV ACGT 4 cut(s) 225, 1080, 2290, 2769
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 80, 1646, 1655, 1664
HpySE526I ACGT 4 cut(s) 225, 1080, 2290, 2769
HspAI GCGC 1 cut(s) 1585
KroI GCCGGC 1 cut(s) 1142
KroNI GCCGGC 1 cut(s) 1144
Ksp22I TGATCA 1 cut(s) 277
KspAI GTTAAC 1 cut(s) 439
LguI GCTCTTC 1 cut(s) 1171
LmnI GCTCC 5 cut(s) 80, 428, 987, 1003, 1966
Lsp1109I GCAGC 8 cut(s) 186, 1347, 1368, 1584, 1675, 1873, 2216, 2828
LweI GCATC 3 cut(s) 244, 2017, 2216
MaeI CTAG 7 cut(s) 434, 731, 744, 1422, 2483, 2523, 2729
MaeII ACGT 4 cut(s) 225, 1080, 2290, 2769
MaeIII GTNAC 5 cut(s) 226, 386, 1267, 1364, 1693
MfeI CAATTG 2 cut(s) 238, 1272
MflI RGATCY 2 cut(s) 282, 1049
MhlI GDGCHC 5 cut(s) 316, 425, 2695, 2750, 2869
MlyI GAGTC 2 cut(s) 1419, 2948
MmeI TCCRAC 7 cut(s) 391, 433, 1025, 1586, 1855, 2266, 2601
MroNI GCCGGC 1 cut(s) 1142
MroXI GAANNNNTTC 1 cut(s) 1628
MseI TTAA 9 cut(s) 438, 650, 794, 897, 1028, 1976, 2124, 2757, 3076
MslI CAYNNNNRTG 4 cut(s) 1616, 1793, 1847, 2786
MspA1I CMGCKG 2 cut(s) 177, 1187
MspI CCGG 3 cut(s) 623, 756, 1143
MspR9I CCNGG 1 cut(s) 327
MunI CAATTG 2 cut(s) 238, 1272
MvaI CCWGG 1 cut(s) 327
MwoI GCNNNNNNNGC 5 cut(s) 71, 80, 1646, 1655, 1664
NaeI GCCGGC 1 cut(s) 1144
NcoI CCATGG 1 cut(s) 519
NdeI CATATG 1 cut(s) 1288
NgoMIV GCCGGC 1 cut(s) 1142
NlaIV GGNNCC 6 cut(s) 403, 424, 1741, 1800, 1840, 2553
NmeAIII GCCGAG 1 cut(s) 597
NmuCI GTSAC 1 cut(s) 226
NspI RCATGY 4 cut(s) 16, 1221, 2854, 3009
PaeI GCATGC 2 cut(s) 2854, 3009
PagI TCATGA 2 cut(s) 2386, 2908
PaqCI CACCTGC 2 cut(s) 239, 1640
PceI AGGCCT 1 cut(s) 2827
PciI ACATGT 1 cut(s) 1217
PciSI GCTCTTC 1 cut(s) 1171
PdiI GCCGGC 1 cut(s) 1144
PdmI GAANNNNTTC 1 cut(s) 1628
PfeI GAWTC 4 cut(s) 736, 830, 2393, 2891
PflFI GACNNNGTC 1 cut(s) 2729
PleI GAGTC 2 cut(s) 1419, 2947
PpsI GAGTC 2 cut(s) 1419, 2947
PpuMI RGGWCCY 1 cut(s) 1838
PscI ACATGT 1 cut(s) 1217
PshBI ATTAAT 1 cut(s) 897
Psp124BI GAGCTC 1 cut(s) 316
Psp1406I AACGTT 1 cut(s) 1080
Psp5II RGGWCCY 1 cut(s) 1838
Psp6I CCWGG 1 cut(s) 325
PspFI CCCAGC 2 cut(s) 1730, 2966
PspGI CCWGG 1 cut(s) 325
PspN4I GGNNCC 6 cut(s) 403, 424, 1741, 1800, 1840, 2553
PspPPI RGGWCCY 1 cut(s) 1838
PstI CTGCAG 3 cut(s) 1825, 1891, 2818
PstNI CAGNNNCTG 1 cut(s) 1121
PsuI RGATCY 2 cut(s) 282, 1049
PsyI GACNNNGTC 1 cut(s) 2729
PvuII CAGCTG 1 cut(s) 1187
RsaI GTAC 7 cut(s) 108, 244, 926, 1235, 2267, 2509, 2974
RsaNI GTAC 7 cut(s) 107, 243, 925, 1234, 2266, 2508, 2973
RseI CAYNNNNRTG 4 cut(s) 1616, 1793, 1847, 2786
SacI GAGCTC 1 cut(s) 316
SapI GCTCTTC 1 cut(s) 1171
SaqAI TTAA 9 cut(s) 438, 650, 794, 897, 1028, 1976, 2124, 2757, 3076
ScaI AGTACT 1 cut(s) 2974
SchI GAGTC 2 cut(s) 1419, 2948
ScrFI CCNGG 1 cut(s) 327
SduI GDGCHC 5 cut(s) 316, 425, 2695, 2750, 2869
SfaNI GCATC 3 cut(s) 244, 2017, 2216
SfcI CTRYAG 5 cut(s) 1389, 1821, 1860, 1887, 2814
SinI GGWCC 8 cut(s) 758, 824, 1313, 1407, 1559, 1772, 1838, 2078
SmiMI CAYNNNNRTG 4 cut(s) 1616, 1793, 1847, 2786
SmlI CTYRAG 3 cut(s) 198, 848, 2011
SmoI CTYRAG 3 cut(s) 198, 848, 2011
SpeI ACTAGT 1 cut(s) 433
SphI GCATGC 2 cut(s) 2854, 3009
SseBI AGGCCT 1 cut(s) 2827
SsiI CCGC 6 cut(s) 177, 234, 257, 460, 1785, 2569
SspI AATATT 5 cut(s) 212, 496, 895, 917, 1636
SspMI CTAG 7 cut(s) 434, 731, 744, 1422, 2483, 2523, 2729
SstI GAGCTC 1 cut(s) 316
StuI AGGCCT 1 cut(s) 2827
StyD4I CCNGG 1 cut(s) 325
StyI CCWWGG 7 cut(s) 69, 519, 551, 983, 1707, 2661, 2738
TaaI ACNGT 7 cut(s) 1181, 1303, 1385, 1522, 2113, 2282, 2400
TaiI ACGT 4 cut(s) 228, 1083, 2293, 2772
TaqI TCGA 4 cut(s) 88, 599, 2733, 2997
TatI WGTACW 3 cut(s) 106, 2265, 2972
TauI GCSGC 2 cut(s) 237, 260
TfiI GAWTC 4 cut(s) 736, 830, 2393, 2891
Tru1I TTAA 9 cut(s) 438, 650, 794, 897, 1028, 1976, 2124, 2757, 3076
Tru9I TTAA 9 cut(s) 438, 650, 794, 897, 1028, 1976, 2124, 2757, 3076
TscAI CASTG 8 cut(s) 141, 1366, 1875, 2116, 2287, 2638, 2847, 2923
TseFI GTSAC 1 cut(s) 226
TseI GCWGC 8 cut(s) 174, 1335, 1356, 1572, 1688, 1886, 2229, 2816
Tsp45I GTSAC 1 cut(s) 226
TspGWI ACGGA 1 cut(s) 327
TspRI CASTG 8 cut(s) 141, 1366, 1875, 2116, 2287, 2638, 2847, 2923
Tth111I GACNNNGTC 1 cut(s) 2729
VpaK11BI GGWCC 8 cut(s) 758, 824, 1313, 1407, 1559, 1772, 1838, 2078
VspI ATTAAT 1 cut(s) 897
XagI CCTNNNNNAGG 1 cut(s) 1758
XapI RAATTY 6 cut(s) 154, 319, 774, 1036, 2162, 2610
XbaI TCTAGA 1 cut(s) 1421
XceI RCATGY 4 cut(s) 16, 1221, 2854, 3009
XcmI CCANNNNNNNNNTGG 4 cut(s) 1143, 2102, 2839, 2950
XmnI GAANNNNTTC 1 cut(s) 1628
XspI CTAG 7 cut(s) 434, 731, 744, 1422, 2483, 2523, 2729
ZrmI AGTACT 1 cut(s) 2974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.