Rorug05G0238900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
25300176 .. 25302590
2415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0238900.1

Sequence Viewer

Length: 2415 bp
ATGAAGCTTTTCATATCCTTCTTTGTTTTTACCACGATTTCCTTCAATTCATTGTCGTTCTCTGCTTCAGCTGCTCTAATCTCTTATGCTGACCATTGTGCTTCAGTTGTTCCCGAGTCAACCGAAAATATAAATGCAGGATCTCAGTTTGTACATCTGATTCACACAGGCTACTACTACACTGGTGGTGGCAGTGACATTCTTAATCTATACTCGCCCGATGATCAGGTCAAAAATTCAGTTGGCTTCCAATGCTGGGATATTAGTGAAACTCATGTACAAGGCTTGTTTAAGGTCGAGGCAACTCTAGAGTTTCAAGTAACCAATATGATTGAGTTGCAAAGCATGCCGCCTAAAATAATTCCAGGTTCGGTTTCATTTAGACTCAATGGATTCTGGTCAAAATCTTCTGGGAAGCTCTGCATGGTTGGATCATCATATCGTCCATTTACTCGAAACAAGGTAATCCACTTTGTTGTTCTTAAGCTGTATAATCTCATCATGAATAACACTAGTGTTACAAGTTTGATTAGTGGAACCTTTGAGAATGTCATGATATCTGAGACTGATCCCAAGTCTTTGGGACCAATCTCTATTTTGATGTTTCCTCGCATGAACTACGCGTACACTTTGGTCTCAAATAGTACTAATAGCAGTTGCTCTAGTGGAAGTGAAGATACCCCACGCTCTTTACATGTTGAGAGATTTTGTTCACTACTATCATCAATAGTACTAAATCATGACTTTCCACTCAAATTTTCAAGCCACTGTATCACTGCAGAGAACTGCATTCCAATTTCTATGTCTAATTTACCTCGGGCTGTGTTGTTTAAGGACATTGCATGCTCGGAGGATAATCGAAGGGTGAGAGTTCTGGTGGAATTTTCTGATGGTAGGCTAAACCAGTGCCCAACGCTCTTCAATCCTAATACAACTTTAGTTGGGGAAGGCTCATGGGATGCAAAGAAGAATCAGCTATGTGTTGTTGCTTGTCGATTCTTGAATACAACAAATTCTTTGAATAATACTAATGTGGGTGATTGTTCAACAAGATTGAGCTTGAGAATTCCAGCAACAGGGACAATTGGAAGTACTAGCAGCATTGTGGGGCATATTTGGAGCACCAAAACTGTGACAGAGTTGGGCTACTTTGAAAAGATCACATTTGCAAGTCGGGACTGTGGTTGTCGCAAGGGTCTACTTCCAGGCCAGACATATGAGTACACTAAAATGGAGAAAGTAACAAACTTGTGCTCGAGAAAGAAGACTGCAAATGACATGGCCAGCATTTACCCAAATCCATTTTTGCATGTCACGAGTTTCATTATGCATGCCGAAAATTCTGAAGGACAAGTTGGATTTGGCAATTGTGTTCCTCTCTCTGTTGACAATAGTATTTACCGGACTGATTGGTCTTCGGGGGAAGATGCATGTGCACCTGAAAGCAATCAAGAATACTCTGTGGCTCCTCTGACTTACAGCTACAACCACAGCAATCCCATCAATATTAGCTACAAAATAGATCTCCAACTACAATCTAATCCAAAGTGGGGCAAGCAGTCGGTTAAATATGAAATGCATATCAATGCTGAAGGGATCTATGATGGTACAGAAGGAAGCCTTTGCATGGTAGGCTGCCGCAAACTTGTCTCAAACAGTCAGCAGGCAACAAATGATTCAATAGATTGTGAGATTCTTGTCCATTTTCAGTTCCCAGCAACAACTGCAAAGGATTTGCATCATATCAAAGGAAGCATTGAGAGCACGCGAAAGAAGTCCGATCCTCTCCATTTTGAACGCTTGGATTTGTCTACAGCTGCCAAGCATGATGAAGAAAAGCGATCCATTTGGAGGATGGATGGGAAGATAACCTTGGTTCTTATATCAACCACACTTGCATGTGTTTTTGCTGCATTACAAATCTTCCATGTGAAAAGAAACCCTGAAGTCATAATTCCCTCTATTTCCATCTTAATGCTTCTAATTCTAACCCTTAGCTACATGTTACCTCTCGGGATTAATTTTGAAGCCATATTCATGCATAATTTCAACCGCCAAAATGTGCACCTTGGAGGGGGTGGATGGTTTGAATTTAATGAGATAATCATAAGGGTGACAACATTGGTAGCTTTCTTGATACAGTTCCACCTTCTGAAGCTAACTTGGTCAGCAAAATTCGGAAATGGAACTCGGAAGGATCTCCGGGTTATGGAAAAGAAGGTTCTCTTTGTGGCTTTACAAGTGTATGCTGTAGGGGCTTTAGCTGCTTTGGTTCTGCATAGACAGAAACTGAGGAAGAGGGACGATCGCATTGAGTTGCCTCATCTAGAGAATACAGTTCTGGATGCATGCCTTGACATCTCACTACAACAAAAGTGGACAATAGATACCATTTCTTCTCCACGATTGAGTTAA

Protein Analysis

804

Amino Acids

89.78

Weight (kDa)

7.95

Isoelectric Point (pI)

37.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 29 - 198 1.2e-12 DUF2921 lipocalin-like domain
DUF2921_N PF25333 305 - 388 1.6e-25 DUF2921 lipocalin-like domain
DUF2921_N PF25333 418 - 602 6.5e-32 DUF2921 lipocalin-like domain
DUF2921 PF11145 613 - 765 4.5e-25 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1411
AccI GTMKAC 2 cut(s) 1198, 1811
AccII CGCG 2 cut(s) 623, 1768
AciI CCGC 3 cut(s) 350, 1639, 2053
AclWI GGATC 7 cut(s) 148, 439, 563, 1604, 1775, 1836, 2205
AcoI YGGCCR 1 cut(s) 1281
AcsI RAATTY 8 cut(s) 235, 755, 881, 1012, 1065, 1339, 2090, 2174
AcuI CTGAAG 6 cut(s) 51, 87, 1365, 1611, 1965, 2174
AfaI GTAC 8 cut(s) 153, 279, 626, 646, 732, 1093, 1223, 1609
AfiI CCNNNNNNNGG 7 cut(s) 256, 1076, 1550, 1627, 1851, 2074, 2209
AflII CTTAAG 1 cut(s) 482
AflIII ACRYGT 3 cut(s) 621, 694, 2001
AhlI ACTAGT 1 cut(s) 512
AjnI CCWGG 2 cut(s) 364, 1204
AjuI GAANNNNNNNTTGG 4 cut(s) 1338, 1370, 1856, 1888
Alw21I GWGCWC 5 cut(s) 1124, 1256, 1438, 1766, 2067
Alw26I GTCTC 3 cut(s) 557, 640, 1654
Alw44I GTGCAC 2 cut(s) 1434, 2063
AlwI GGATC 7 cut(s) 148, 439, 563, 1604, 1775, 1836, 2205
AlwNI CAGNNNCTG 1 cut(s) 2290
Ama87I CYCGRG 4 cut(s) 113, 816, 1255, 2012
AoxI GGCC 2 cut(s) 1207, 1281
ApaLI GTGCAC 2 cut(s) 1434, 2063
ApeKI GCWGC 6 cut(s) 71, 1098, 1635, 1817, 1910, 2264
ApoI RAATTY 8 cut(s) 235, 755, 881, 1012, 1065, 1339, 2090, 2174
AseI ATTAAT 1 cut(s) 2019
Asp700I GAANNNNTTC 1 cut(s) 8
AspS9I GGNCC 1 cut(s) 584
AsuC2I CCSGG 1 cut(s) 2204
AsuHPI GGTGA 3 cut(s) 877, 1049, 2125
AvaI CYCGRG 4 cut(s) 113, 816, 1255, 2012
AvaII GGWCC 1 cut(s) 584
BaeGI GKGCMC 3 cut(s) 911, 1438, 2067
BalI TGGCCA 1 cut(s) 1283
BarI GAAGNNNNNNTAC 2 cut(s) 661, 693
BauI CACGAG 1 cut(s) 1315
BbsI GAAGAC 2 cut(s) 1271, 1407
Bbv12I GWGCWC 5 cut(s) 1124, 1256, 1438, 1766, 2067
BbvI GCAGC 6 cut(s) 58, 1110, 1622, 1804, 1897, 2251
BccI CCATC 7 cut(s) 884, 1508, 1598, 1849, 1853, 1976, 2076
BciT130I CCWGG 2 cut(s) 366, 1206
BclI TGATCA 1 cut(s) 223
BcnI CCSGG 1 cut(s) 2204
BcoDI GTCTC 3 cut(s) 557, 640, 1654
BcuI ACTAGT 1 cut(s) 512
BfaI CTAG 5 cut(s) 308, 513, 663, 1095, 2327
BfmI CTRYAG 3 cut(s) 777, 1812, 2250
BfrI CTTAAG 1 cut(s) 482
BglII AGATCT 1 cut(s) 1522
BisI GCNGC 8 cut(s) 72, 350, 1099, 1636, 1639, 1818, 1911, 2265
BlsI GCNGC 8 cut(s) 73, 351, 1100, 1637, 1640, 1819, 1912, 2266
BmcAI AGTACT 3 cut(s) 646, 732, 1093
Bme1390I CCNGG 3 cut(s) 366, 1206, 2204
Bme18I GGWCC 1 cut(s) 584
BmeT110I CYCGRG 4 cut(s) 113, 816, 1255, 2012
BmgT120I GGNCC 1 cut(s) 584
BmiI GGNNCC 3 cut(s) 538, 585, 1467
BmrFI CCNGG 3 cut(s) 366, 1206, 2204
BmsI GCATC 4 cut(s) 949, 1417, 1747, 2335
BpiI GAAGAC 2 cut(s) 1271, 1407
Bpu10I CCTNAGC 1 cut(s) 1994
BpuEI CTTGAG 1 cut(s) 1081
BpuMI CCSGG 1 cut(s) 2204
BsaBI GATNNNNATC 1 cut(s) 1737
BsaI GGTCTC 1 cut(s) 640
BsaJI CCNNGG 3 cut(s) 815, 1872, 2068
BsaWI WCCGGW 1 cut(s) 1401
Bsc4I CCNNNNNNNGG 7 cut(s) 256, 1076, 1550, 1627, 1851, 2074, 2209
Bse1I ACTGG 2 cut(s) 187, 904
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 1737
BseBI CCWGG 2 cut(s) 366, 1206
BseDI CCNNGG 3 cut(s) 815, 1872, 2068
BseGI GGATG 5 cut(s) 964, 1860, 1864, 2087, 2350
BseJI GATNNNNATC 1 cut(s) 1737
BseLI CCNNNNNNNGG 7 cut(s) 256, 1076, 1550, 1627, 1851, 2074, 2209
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 3 cut(s) 158, 552, 2282
BseNI ACTGG 2 cut(s) 187, 904
BseRI GAGGAG 1 cut(s) 1458
BseSI GKGCMC 3 cut(s) 911, 1438, 2067
BseXI GCAGC 6 cut(s) 58, 1110, 1622, 1804, 1897, 2251
BseYI CCCAGC 2 cut(s) 255, 1714
Bsh1236I CGCG 2 cut(s) 623, 1768
Bsh1285I CGRYCG 1 cut(s) 2308
BshFI GGCC 2 cut(s) 1209, 1283
BsiEI CGRYCG 1 cut(s) 2308
BsiHKAI GWGCWC 5 cut(s) 1124, 1256, 1438, 1766, 2067
BsiHKCI CYCGRG 4 cut(s) 113, 816, 1255, 2012
BsiSI CCGG 2 cut(s) 1402, 2203
BslFI GGGAC 4 cut(s) 597, 1093, 1190, 2315
BslI CCNNNNNNNGG 7 cut(s) 256, 1076, 1550, 1627, 1851, 2074, 2209
BsmAI GTCTC 3 cut(s) 557, 640, 1654
BsmFI GGGAC 4 cut(s) 597, 1093, 1190, 2315
BsmI GAATGC 1 cut(s) 789
BsnI GGCC 2 cut(s) 1209, 1283
Bso31I GGTCTC 1 cut(s) 640
BsoBI CYCGRG 4 cut(s) 113, 816, 1255, 2012
Bsp1286I GDGCHC 6 cut(s) 911, 1124, 1256, 1438, 1766, 2067
Bsp1407I TGTACA 2 cut(s) 151, 277
BspACI CCGC 3 cut(s) 350, 1639, 2053
BspANI GGCC 2 cut(s) 1209, 1283
BspCNI CTCAG 3 cut(s) 157, 553, 2283
BspFNI CGCG 2 cut(s) 623, 1768
BspHI TCATGA 3 cut(s) 501, 552, 739
BspLI GGNNCC 3 cut(s) 538, 585, 1467
BspMAI CTGCAG 1 cut(s) 781
BspPI GGATC 7 cut(s) 148, 439, 563, 1604, 1775, 1836, 2205
BspQI GCTCTTC 1 cut(s) 923
BspTI CTTAAG 1 cut(s) 482
BspTNI GGTCTC 1 cut(s) 640
BsrDI GCAATG 1 cut(s) 837
BsrGI TGTACA 2 cut(s) 151, 277
BsrI ACTGG 2 cut(s) 187, 904
BssECI CCNNGG 3 cut(s) 815, 1872, 2068
BssSI CACGAG 1 cut(s) 1315
BssT1I CCWWGG 2 cut(s) 1872, 2068
Bst2BI CACGAG 1 cut(s) 1315
Bst2UI CCWGG 2 cut(s) 366, 1206
Bst4CI ACNGT 6 cut(s) 770, 1132, 1181, 1658, 2142, 2338
Bst6I CTCTTC 2 cut(s) 923, 2291
BstAFI CTTAAG 1 cut(s) 482
BstAPI GCANNNNNTGC 2 cut(s) 346, 1724
BstAUI TGTACA 2 cut(s) 151, 277
BstC8I GCNNGC 8 cut(s) 347, 844, 1285, 1332, 1556, 1665, 1766, 2350
BstDEI CTNAG 4 cut(s) 144, 561, 1994, 2291
BstF5I GGATG 5 cut(s) 964, 1860, 1864, 2087, 2350
BstFNI CGCG 2 cut(s) 623, 1768
BstMAI GTCTC 3 cut(s) 557, 640, 1654
BstMCI CGRYCG 1 cut(s) 2308
BstMWI GCNNNNNNNGC 8 cut(s) 71, 252, 346, 1632, 1724, 1761, 2255, 2264
BstNI CCWGG 2 cut(s) 366, 1206
BstNSI RCATGY 9 cut(s) 349, 698, 846, 1313, 1334, 1434, 1902, 2005, 2352
BstSCI CCNGG 3 cut(s) 364, 1204, 2202
BstSFI CTRYAG 3 cut(s) 777, 1812, 2250
BstSLI GKGCMC 3 cut(s) 911, 1438, 2067
BstUI CGCG 2 cut(s) 623, 1768
BstV1I GCAGC 6 cut(s) 58, 1110, 1622, 1804, 1897, 2251
BstV2I GAAGAC 2 cut(s) 1271, 1407
BstX2I RGATCY 4 cut(s) 140, 1522, 1596, 2197
BstXI CCANNNNNNTGG 1 cut(s) 580
BstYI RGATCY 4 cut(s) 140, 1522, 1596, 2197
BsuRI GGCC 2 cut(s) 1209, 1283
BtsCI GGATG 5 cut(s) 964, 1860, 1864, 2087, 2350
BtsI GCAGTG 2 cut(s) 199, 774
BtsIMutI CAGTG 5 cut(s) 180, 199, 766, 774, 911
Cac8I GCNNGC 8 cut(s) 347, 844, 1285, 1332, 1556, 1665, 1766, 2350
CaiI CAGNNNCTG 1 cut(s) 2290
CciI TCATGA 3 cut(s) 501, 552, 739
Cfr13I GGNCC 1 cut(s) 584
Csp6I GTAC 8 cut(s) 152, 278, 625, 645, 731, 1092, 1222, 1608
CspCI CAANNNNNGTGG 2 cut(s) 2357, 2392
CviQI GTAC 8 cut(s) 152, 278, 625, 645, 731, 1092, 1222, 1608
DdeI CTNAG 4 cut(s) 144, 561, 1994, 2291
DrdI GACNNNNNNGTC 1 cut(s) 1411
DseDI GACNNNNNNGTC 1 cut(s) 1411
EaeI YGGCCR 1 cut(s) 1281
Eam1104I CTCTTC 2 cut(s) 923, 2291
EarI CTCTTC 2 cut(s) 923, 2291
Eco130I CCWWGG 2 cut(s) 1872, 2068
Eco31I GGTCTC 1 cut(s) 640
Eco32I GATATC 1 cut(s) 558
Eco47I GGWCC 1 cut(s) 584
Eco57I CTGAAG 6 cut(s) 51, 87, 1365, 1611, 1965, 2174
Eco88I CYCGRG 4 cut(s) 113, 816, 1255, 2012
EcoRI GAATTC 1 cut(s) 1065
EcoRII CCWGG 2 cut(s) 364, 1204
EcoRV GATATC 1 cut(s) 558
EcoT14I CCWWGG 2 cut(s) 1872, 2068
EcoT22I ATGCAT 5 cut(s) 1332, 1432, 1581, 2043, 2350
ErhI CCWWGG 2 cut(s) 1872, 2068
FalI AAGNNNNNCTT 6 cut(s) 1605, 1637, 1856, 1888, 2210, 2242
FaqI GGGAC 4 cut(s) 597, 1093, 1190, 2315
FauNDI CATATG 1 cut(s) 1216
FbaI TGATCA 1 cut(s) 223
FblI GTMKAC 2 cut(s) 1198, 1811
Fnu4HI GCNGC 8 cut(s) 72, 350, 1099, 1636, 1639, 1818, 1911, 2265
FokI GGATG 5 cut(s) 971, 1867, 1871, 2094, 2357
Fsp4HI GCNGC 8 cut(s) 72, 350, 1099, 1636, 1639, 1818, 1911, 2265
FspBI CTAG 5 cut(s) 308, 513, 663, 1095, 2327
GluI GCNGC 8 cut(s) 72, 350, 1099, 1636, 1639, 1818, 1911, 2265
GsaI CCCAGC 2 cut(s) 259, 1718
HaeIII GGCC 2 cut(s) 1209, 1283
HapII CCGG 2 cut(s) 1402, 2203
HincII GTYRAC 2 cut(s) 120, 1387
HindII GTYRAC 2 cut(s) 120, 1387
HindIII AAGCTT 1 cut(s) 5
HinfI GANTC 8 cut(s) 116, 160, 384, 393, 970, 996, 1676, 1693
HpaII CCGG 2 cut(s) 1402, 2203
HphI GGTGA 3 cut(s) 877, 1049, 2125
HpyCH4III ACNGT 6 cut(s) 770, 1132, 1181, 1658, 2142, 2338
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 252, 346, 1632, 1724, 1761, 2255, 2264
HpyF3I CTNAG 4 cut(s) 144, 561, 1994, 2291
Ksp22I TGATCA 1 cut(s) 223
LguI GCTCTTC 1 cut(s) 923
LmnI GCTCC 2 cut(s) 1119, 1471
Lsp1109I GCAGC 6 cut(s) 58, 1110, 1622, 1804, 1897, 2251
LweI GCATC 4 cut(s) 949, 1417, 1747, 2335
MaeI CTAG 5 cut(s) 308, 513, 663, 1095, 2327
MaeIII GTNAC 8 cut(s) 194, 319, 517, 1132, 1240, 1312, 2004, 2113
MfeI CAATTG 2 cut(s) 1083, 1366
MflI RGATCY 4 cut(s) 140, 1522, 1596, 2197
MhlI GDGCHC 6 cut(s) 911, 1124, 1256, 1438, 1766, 2067
MlsI TGGCCA 1 cut(s) 1283
MluI ACGCGT 1 cut(s) 621
MluNI TGGCCA 1 cut(s) 1283
MlyI GAGTC 2 cut(s) 125, 378
MmeI TCCRAC 3 cut(s) 409, 1336, 1552
Mox20I TGGCCA 1 cut(s) 1283
Mph1103I ATGCAT 5 cut(s) 1332, 1432, 1581, 2043, 2350
MroXI GAANNNNTTC 1 cut(s) 8
MscI TGGCCA 1 cut(s) 1283
MseI TTAA 9 cut(s) 204, 291, 483, 831, 1566, 1973, 2019, 2094, 2413
MslI CAYNNNNRTG 6 cut(s) 1229, 1584, 1897, 1973, 2036, 2111
Msp20I TGGCCA 1 cut(s) 1283
MspA1I CMGCKG 2 cut(s) 71, 1817
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 2 cut(s) 1402, 2203
MspR9I CCNGG 3 cut(s) 366, 1206, 2204
MunI CAATTG 2 cut(s) 1083, 1366
Mva1269I GAATGC 1 cut(s) 789
MvaI CCWGG 2 cut(s) 366, 1206
MvnI CGCG 2 cut(s) 623, 1768
MwoI GCNNNNNNNGC 8 cut(s) 71, 252, 346, 1632, 1724, 1761, 2255, 2264
NciI CCSGG 1 cut(s) 2204
NdeI CATATG 1 cut(s) 1216
NlaIV GGNNCC 3 cut(s) 538, 585, 1467
NmuCI GTSAC 4 cut(s) 194, 1132, 1312, 2113
NsiI ATGCAT 5 cut(s) 1332, 1432, 1581, 2043, 2350
NspI RCATGY 9 cut(s) 349, 698, 846, 1313, 1334, 1434, 1902, 2005, 2352
PaeI GCATGC 4 cut(s) 349, 846, 1334, 2352
PaeR7I CTCGAG 1 cut(s) 1255
PagI TCATGA 3 cut(s) 501, 552, 739
PciI ACATGT 2 cut(s) 694, 2001
PciSI GCTCTTC 1 cut(s) 923
PctI GAATGC 1 cut(s) 789
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 6 cut(s) 160, 393, 970, 996, 1676, 1693
PkrI GCNGC 8 cut(s) 73, 351, 1100, 1637, 1640, 1819, 1912, 2266
Ple19I CGATCG 1 cut(s) 2308
PleI GAGTC 2 cut(s) 124, 378
PpsI GAGTC 2 cut(s) 124, 378
PscI ACATGT 2 cut(s) 694, 2001
PshBI ATTAAT 1 cut(s) 2019
Psp6I CCWGG 2 cut(s) 364, 1204
PspFI CCCAGC 2 cut(s) 255, 1714
PspGI CCWGG 2 cut(s) 364, 1204
PspN4I GGNNCC 3 cut(s) 538, 585, 1467
PspPI GGNCC 1 cut(s) 584
PsrI GAACNNNNNNTAC 2 cut(s) 608, 640
PstI CTGCAG 1 cut(s) 781
PstNI CAGNNNCTG 1 cut(s) 2290
PsuI RGATCY 4 cut(s) 140, 1522, 1596, 2197
PvuI CGATCG 1 cut(s) 2308
PvuII CAGCTG 2 cut(s) 71, 1817
RsaI GTAC 8 cut(s) 153, 279, 626, 646, 732, 1093, 1223, 1609
RsaNI GTAC 8 cut(s) 152, 278, 625, 645, 731, 1092, 1222, 1608
RseI CAYNNNNRTG 6 cut(s) 1229, 1584, 1897, 1973, 2036, 2111
SapI GCTCTTC 1 cut(s) 923
SaqAI TTAA 9 cut(s) 204, 291, 483, 831, 1566, 1973, 2019, 2094, 2413
SatI GCNGC 8 cut(s) 72, 350, 1099, 1636, 1639, 1818, 1911, 2265
Sau96I GGNCC 1 cut(s) 584
ScaI AGTACT 3 cut(s) 646, 732, 1093
SchI GAGTC 2 cut(s) 125, 378
ScrFI CCNGG 3 cut(s) 366, 1206, 2204
SduI GDGCHC 6 cut(s) 911, 1124, 1256, 1438, 1766, 2067
SfaNI GCATC 4 cut(s) 949, 1417, 1747, 2335
SfcI CTRYAG 3 cut(s) 777, 1812, 2250
Sfr274I CTCGAG 1 cut(s) 1255
SinI GGWCC 1 cut(s) 584
SlaI CTCGAG 1 cut(s) 1255
SmiMI CAYNNNNRTG 6 cut(s) 1229, 1584, 1897, 1973, 2036, 2111
SmlI CTYRAG 3 cut(s) 482, 1060, 1255
SmoI CTYRAG 3 cut(s) 482, 1060, 1255
SpeI ACTAGT 1 cut(s) 512
SphI GCATGC 4 cut(s) 349, 846, 1334, 2352
SsiI CCGC 3 cut(s) 350, 1639, 2053
SspI AATATT 1 cut(s) 1507
SspMI CTAG 5 cut(s) 308, 513, 663, 1095, 2327
StyD4I CCNGG 3 cut(s) 364, 1204, 2202
StyI CCWWGG 2 cut(s) 1872, 2068
TaaI ACNGT 6 cut(s) 770, 1132, 1181, 1658, 2142, 2338
TaqI TCGA 5 cut(s) 297, 454, 859, 994, 1256
TatI WGTACW 6 cut(s) 151, 277, 644, 730, 1091, 1221
TauI GCSGC 2 cut(s) 352, 1641
TfiI GAWTC 6 cut(s) 160, 393, 970, 996, 1676, 1693
Tru1I TTAA 9 cut(s) 204, 291, 483, 831, 1566, 1973, 2019, 2094, 2413
Tru9I TTAA 9 cut(s) 204, 291, 483, 831, 1566, 1973, 2019, 2094, 2413
TscAI CASTG 5 cut(s) 187, 199, 773, 781, 911
TseFI GTSAC 4 cut(s) 194, 1132, 1312, 2113
TseI GCWGC 6 cut(s) 71, 1098, 1635, 1817, 1910, 2264
Tsp45I GTSAC 4 cut(s) 194, 1132, 1312, 2113
TspDTI ATGAA 9 cut(s) 17, 39, 366, 518, 629, 1312, 1587, 1845, 2026
TspRI CASTG 5 cut(s) 187, 199, 773, 781, 911
Vha464I CTTAAG 1 cut(s) 482
VneI GTGCAC 2 cut(s) 1434, 2063
VpaK11BI GGWCC 1 cut(s) 584
VspI ATTAAT 1 cut(s) 2019
XapI RAATTY 8 cut(s) 235, 755, 881, 1012, 1065, 1339, 2090, 2174
XbaI TCTAGA 2 cut(s) 307, 2326
XceI RCATGY 9 cut(s) 349, 698, 846, 1313, 1334, 1434, 1902, 2005, 2352
XcmI CCANNNNNNNNNTGG 1 cut(s) 1852
XhoI CTCGAG 1 cut(s) 1255
XmiI GTMKAC 2 cut(s) 1198, 1811
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 5 cut(s) 308, 513, 663, 1095, 2327
ZrmI AGTACT 3 cut(s) 646, 732, 1093
Zsp2I ATGCAT 5 cut(s) 1332, 1432, 1581, 2043, 2350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.