Rw0G012460

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00551
Physical Location & Seq
Forward (+)
4938 .. 20104
15167 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G012460.1

Sequence Viewer

Length: 3069 bp
ATGAATTACACATTCTTCTTCCCTAGGCTTCTTGTTCATTTTATCTCGCTGGTTATCTATGCAAGCTTTGCTTTCGGAGCTACTCGATTACCAGAAGATGAAGTACAAGCTTTAAGGAGCATTGGAAATAGACTGGGAAAGGGCTGGGATTTCATGGCAGATCCCTGTAGCGGAGCATCTGGATGGATTAATACTACCTCAGGCAGCGCAGCTGATAACAACGTCACCTGCGGCAATTGTAGTACTGCTGGCGATGATCAGATCTGCCATGTTACAATCATATCTCTGAAATCCCTGGATTTGGCAGGAACACTCCCACCAGAGTTGGCGAACCTCACCTATCTACAAACAATTGACCTCTCCCGCAACTATCTGAGTGGTACCATCCCTCGACAATGGGGCTCCCTGCCGCTAGTTACCATTTCCCTTGTTGGAAACCGTTTGACAGGTCCTATCCCCATTGAGATCGGAAACATTAGCACCCTGCAAAGTTTGGACATCACTTCCAATAATTTTTCAGGACTTCCTCTGGAGCTTGGGAATTTAACCAGCATAAAGAAAATGCTTCTTTCCTCAAACAATTTTACTGGGGAATTGCCCGAAACATTTGCAAGGCTTACCACATTAACGGACTTTCGGGTTGATGACAATCACTTTTCTGGGAAGATACCTGATTTCATTCAGAACTGGAAAAATCTTACAAAACTAGTAATTCAGGCTAGTGGTTTGACTGGGCCAATTCCATCCAGCATCTCTCTTTTGAAGGAATTAACTGACCTGAGAATTACTGACTTGGATGGACCTGATGAAGCACATTTTCCTCGACTTGATAATATGAAAAACCTGAAAACACTGATGTTGAGGAATTGCAATCTTACTGGAGAACTACCTACGTATCTTGCAGATCTGACAAAGTTGAAAACCTTAGACCTCAGCTTTAACAAGCTTACTGGGAAAATTCGAAGCTCCTTTGTTACAGACGGTTTGGATTACATATTCTTAACTGGAAACTTGCTGAATGGATCAGTGCCCGAACTGAAAGGGGACAACATTGATCTTTCGTACAACAACATCACAACCACTAGTGGGACCAGCAATTGTCGCCATGGCGGCATGAACTTGTTTGCAACCTCGTCAAAGGGAAATAATTCAATTATTTCATGTTTAGGAGAGGCAACATGTCCGAAAGACTTGTACTACTCTCTCCATATAAATTGTGGTGGAATTGCAATAGATGTTAATGAAAATGTCACCAAGCCCGTAACTTATGAAGCAGATAACAGTCCAGGTGGCCCTTCATCATTTTTTTACGATAGCAAAAGCAATTGGGGGTTTAGCAGCACTGGTTACTACCCTGATGATGACAGTTCTGTAGACACCTTTATTGTGGATAATATATCTACACTCTCCATGCCCGATCCTATGACTAATCCTCGGCTGTACATGACTGCACGTGTTTCACCCATCTCTCTAACTTATTTTGGGTTTTGCCTGATGAAAGGAAACTACACAGTGAAGCTCCATTTTGCAGAGATACAGTTTACAAATGACAAAACATATCGCAGCTTGGGAAGGCGTATATTTGATGTTTACATTCAGGGGAAACGAGTGGAGAAGGATTTTAATATCGCGGATGAAGCAGGTGGGAATGGAAAATTATTCACAAAAAAATATAATGCTTCTGTAACAACTAATACCTTGGAGATTCGTTTCCTTTGGAAAGGGAAAGGAACACAGGCTATCCCTAAAAGAGGAGTCTATGGTCCTCTTATATCAGCCATTTCTGCAGACCCATTAGATTTTACACCCCCGGAAGAAGCCTCGCCAGGAGGTGGAAGCGGTATATCCGCAGGTGAAGTGGTTGGAATTGTGGCTGGAGGAGTGTTCATAATATTAGTGATTTTAGGTATTCTCTGGTGGAAAGGCTTCATAGGACCAGCAAATACTTTGGAACAAGATTTGAAGGGTGTGGACCTGCAGACTGGCAAATTTAGCTTGAGGCAAATCAAAACTGCCACAAACAACTTTGACATAGCGAACAAGATTGGAGAAGGTGGATTTGGTCCTGTTTACAGGGGCCTTCTATCAGACAACACTGCAATTGCTGTTAAGAAGCTTTCAGCCAAATCGAAGCAAGGGAATCGTGAATTTGTGAATGAGATAGGCATGATTTCTGCTCTGCAACACCCTCACCTTGTCAAGCTTTATGGATGCTGTATTGAAGGAAATAACTTGTTGCTTGTCTATGAGTACATGGAAAACAATAGTCTCGCACGTGCTCTATTTGGCCCAAAAGAAAGTCAGGTGAAGTTGGACTGGCCAACAAGGCATAGGATTTGTGTTGGTATAGCCAGAGGCTTGGCTTACCTCCATGAGGAATCAAGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCAAAGATATCTGACTTTGGATTGGCCAAGCTTGATGAAGACGATAATACCCACATAAGCACTCGGATTGCTGGAACTTTTGGTTATATGGCACCTGAATATGCAATGCGAGGTTATCTGACTGATAAAGCAGATGTTTATAGTTTCGGAATTCTTGTATTGGAAATGGTCAGTGGAAGGTGCAATACAACTTACCGCTCAAAGGAAGAATGTTTTTATCTTCTAGATTGGGCACTTCTTCTAAAAGAGAGAGCAAGTTTGTTGGACCTGGTGGATCCAAGGTTGGACTCAGAGTTTAACAAAGCAGAGATGATTACTACGATCAATATTGCTCTCCTTTGTGCCAATACTTCTTCAGCAGTTAGACCTGCCATGTCTTCAGTGGTAAGCATGCTTGAAGGTAAGTCTTCTGTTCAAGAGGTGGTCTTTGATCCAAACGCCTCAATTAATGAAATCAATGCGATGAGGAAACATTTTCAATCCAATATTGAAGAAAACAATGGTGACCCTGAGAGTCAGAAACAAACTATGTCGATTGAAGGGTCGTGGACTGCTTCATCTACATCTGCTCAAGACCTCTATCCAGTCCGCCCTGATTCATATTATTGGGAGAATAGAAATTAG

Protein Analysis

1022

Amino Acids

112.38

Weight (kDa)

5.7

Isoelectric Point (pI)

30.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 155 - 262 1e-08 Leucine-rich repeat region
LRR_4 PF12799 280 - 317 1.9e-06 Leucine Rich repeats (2 copies)
Malectin PF11721 401 - 594 2.9e-40 Malectin domain
PK_Tyr_Ser-Thr PF07714 678 - 880 7e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 678 - 877 1.9e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 236, 1631, 1841
Acc36I ACCTGC 5 cut(s) 236, 1631, 1841, 1983, 2821
Acc65I GGTACC 1 cut(s) 380
AccB1I GGYRCC 2 cut(s) 380, 2536
AccB7I CCANNNNNTGG 1 cut(s) 1832
AccBSI CCGCTC 1 cut(s) 2643
AccI GTMKAC 1 cut(s) 1374
AccII CGCG 1 cut(s) 1631
AclWI GGATC 6 cut(s) 155, 1030, 1412, 2714, 2727, 2870
AcoI YGGCCR 2 cut(s) 2318, 2469
AcsI RAATTY 5 cut(s) 541, 957, 1988, 2147, 2595
AcuI CTGAAG 2 cut(s) 2784, 2808
AcvI CACGTG 2 cut(s) 1454, 2276
AfaI GTAC 7 cut(s) 105, 244, 382, 1064, 1196, 1442, 2252
AfiI CCNNNNNNNGG 7 cut(s) 170, 301, 1086, 1751, 1832, 2374, 2647
AflIII ACRYGT 2 cut(s) 1178, 1453
AhlI ACTAGT 2 cut(s) 706, 1082
AjnI CCWGG 4 cut(s) 294, 1285, 1825, 2712
AjuI GAANNNNNNNTTGG 2 cut(s) 2043, 2075
Alw21I GWGCWC 1 cut(s) 2281
Alw26I GTCTC 2 cut(s) 2273, 2397
AlwI GGATC 6 cut(s) 155, 1030, 1412, 2714, 2727, 2870
AoxI GGCC 6 cut(s) 734, 1291, 2077, 2287, 2318, 2469
ApeKI GCWGC 4 cut(s) 204, 209, 1338, 1563
ApoI RAATTY 5 cut(s) 541, 957, 1988, 2147, 2595
AseI ATTAAT 2 cut(s) 189, 2892
Asp700I GAANNNNTTC 2 cut(s) 1147, 1925
Asp718I GGTACC 1 cut(s) 380
AspA2I CCTAGG 1 cut(s) 23
AspLEI GCGC 1 cut(s) 209
AsuC2I CCSGG 1 cut(s) 1811
AsuHPI GGTGA 8 cut(s) 217, 328, 1243, 1452, 1865, 2183, 2317, 2960
AsuII TTCGAA 1 cut(s) 961
AvaII GGWCC 8 cut(s) 449, 800, 1089, 1763, 1934, 1972, 2063, 2710
AvrII CCTAGG 1 cut(s) 23
AxyI CCTNAGG 1 cut(s) 199
BaeGI GKGCMC 2 cut(s) 1032, 2680
BaeI ACNNNNGTAYC 2 cut(s) 878, 911
BalI TGGCCA 2 cut(s) 2320, 2471
BamHI GGATCC 1 cut(s) 2719
BanI GGYRCC 2 cut(s) 380, 2536
BanII GRGCYC 1 cut(s) 404
BarI GAAGNNNNNNTAC 4 cut(s) 87, 119, 2614, 2646
BbrPI CACGTG 2 cut(s) 1454, 2276
BbsI GAAGAC 3 cut(s) 2490, 2814, 2844
Bbv12I GWGCWC 1 cut(s) 2281
BbvCI CCTCAGC 1 cut(s) 932
BbvI GCAGC 4 cut(s) 216, 221, 1350, 1575
BccI CCATC 5 cut(s) 177, 392, 751, 791, 1472
BcgI CGANNNNNNTGC 4 cut(s) 590, 624, 2123, 2157
BciT130I CCWGG 4 cut(s) 296, 1287, 1827, 2714
BclI TGATCA 1 cut(s) 256
BcnI CCSGG 1 cut(s) 1811
BcoDI GTCTC 2 cut(s) 2273, 2397
BcuI ACTAGT 2 cut(s) 706, 1082
BfaI CTAG 6 cut(s) 24, 413, 707, 720, 1083, 2669
BfmI CTRYAG 4 cut(s) 166, 1371, 1785, 1976
BfuAI ACCTGC 5 cut(s) 236, 1631, 1841, 1983, 2821
BglI GCCNNNNNGGC 2 cut(s) 1110, 2326
BglII AGATCT 2 cut(s) 261, 904
BisI GCNGC 7 cut(s) 205, 210, 232, 410, 1111, 1339, 1564
BlnI CCTAGG 1 cut(s) 23
BlsI GCNGC 7 cut(s) 206, 211, 233, 411, 1112, 1340, 1565
BmcAI AGTACT 1 cut(s) 244
Bme1390I CCNGG 5 cut(s) 296, 1287, 1811, 1827, 2714
Bme18I GGWCC 8 cut(s) 449, 800, 1089, 1763, 1934, 1972, 2063, 2710
BmiI GGNNCC 6 cut(s) 382, 403, 1090, 2078, 2538, 2721
BmrFI CCNGG 5 cut(s) 296, 1287, 1811, 1827, 2714
BmrI ACTGGG 4 cut(s) 143, 597, 741, 960
BmsI GCATC 3 cut(s) 185, 759, 2201
BmuI ACTGGG 4 cut(s) 143, 597, 741, 960
BpiI GAAGAC 3 cut(s) 2490, 2814, 2844
BpmI CTGGAG 3 cut(s) 551, 900, 1896
Bpu10I CCTNAGC 1 cut(s) 932
Bpu14I TTCGAA 1 cut(s) 961
BpuEI CTTGAG 2 cut(s) 2017, 3000
BpuMI CCSGG 1 cut(s) 1811
BsaAI YACGTR 3 cut(s) 894, 1454, 2276
BsaBI GATNNNNATC 2 cut(s) 648, 2436
BsaJI CCNNGG 7 cut(s) 23, 294, 1105, 1433, 1698, 1809, 2723
Bsc4I CCNNNNNNNGG 7 cut(s) 170, 301, 1086, 1751, 1832, 2374, 2647
Bse21I CCTNAGG 1 cut(s) 199
Bse3DI GCAATG 1 cut(s) 2556
Bse8I GATNNNNATC 2 cut(s) 648, 2436
BseBI CCWGG 4 cut(s) 296, 1287, 1827, 2714
BseDI CCNNGG 7 cut(s) 23, 294, 1105, 1433, 1698, 1809, 2723
BseGI GGATG 6 cut(s) 188, 384, 743, 802, 1639, 2216
BseJI GATNNNNATC 2 cut(s) 648, 2436
BseLI CCNNNNNNNGG 7 cut(s) 170, 301, 1086, 1751, 1832, 2374, 2647
BseMI GCAATG 1 cut(s) 2556
BseMII CTCAG 6 cut(s) 213, 365, 770, 946, 2748, 2946
BseRI GAGGAG 2 cut(s) 1767, 1893
BseSI GKGCMC 2 cut(s) 1032, 2680
BseXI GCAGC 4 cut(s) 216, 221, 1350, 1575
BseYI CCCAGC 1 cut(s) 144
BsgI GTGCAG 1 cut(s) 1434
Bsh1236I CGCG 1 cut(s) 1631
BshFI GGCC 6 cut(s) 736, 1293, 2079, 2289, 2320, 2471
BshNI GGYRCC 2 cut(s) 380, 2536
BsiHKAI GWGCWC 1 cut(s) 2281
BsiSI CCGG 1 cut(s) 1811
BslFI GGGAC 2 cut(s) 1058, 1102
BslI CCNNNNNNNGG 7 cut(s) 170, 301, 1086, 1751, 1832, 2374, 2647
BsmAI GTCTC 2 cut(s) 2273, 2397
BsmFI GGGAC 2 cut(s) 1058, 1102
BsnI GGCC 6 cut(s) 736, 1293, 2079, 2289, 2320, 2471
Bsp119I TTCGAA 1 cut(s) 961
Bsp1286I GDGCHC 4 cut(s) 404, 1032, 2281, 2680
Bsp1407I TGTACA 1 cut(s) 1440
Bsp19I CCATGG 1 cut(s) 1105
BspANI GGCC 6 cut(s) 736, 1293, 2079, 2289, 2320, 2471
BspCNI CTCAG 6 cut(s) 212, 366, 771, 945, 2747, 2947
BspFNI CGCG 1 cut(s) 1631
BspLI GGNNCC 6 cut(s) 382, 403, 1090, 2078, 2538, 2721
BspMAI CTGCAG 2 cut(s) 1789, 1980
BspMI ACCTGC 5 cut(s) 236, 1631, 1841, 1983, 2821
BspPI GGATC 6 cut(s) 155, 1030, 1412, 2714, 2727, 2870
BspT104I TTCGAA 1 cut(s) 961
BspT107I GGYRCC 2 cut(s) 380, 2536
BsrBI CCGCTC 1 cut(s) 2643
BsrDI GCAATG 1 cut(s) 2556
BsrGI TGTACA 1 cut(s) 1440
BssECI CCNNGG 7 cut(s) 23, 294, 1105, 1433, 1698, 1809, 2723
BssT1I CCWWGG 4 cut(s) 23, 1105, 1698, 2723
Bst2UI CCWGG 4 cut(s) 296, 1287, 1827, 2714
Bst4CI ACNGT 6 cut(s) 440, 983, 1283, 1367, 1513, 1539
BstAPI GCANNNNNTGC 1 cut(s) 68
BstAUI TGTACA 1 cut(s) 1440
BstBAI YACGTR 3 cut(s) 894, 1454, 2276
BstBI TTCGAA 1 cut(s) 961
BstC8I GCNNGC 3 cut(s) 64, 250, 2837
BstDEI CTNAG 7 cut(s) 199, 374, 779, 925, 932, 2734, 2955
BstDSI CCRYGG 1 cut(s) 1105
BstEII GGTNACC 1 cut(s) 2948
BstENI CCTNNNNNAGG 2 cut(s) 1749, 2372
BstF5I GGATG 6 cut(s) 188, 384, 743, 802, 1639, 2216
BstFNI CGCG 1 cut(s) 1631
BstHHI GCGC 1 cut(s) 209
BstMAI GTCTC 2 cut(s) 2273, 2397
BstMWI GCNNNNNNNGC 8 cut(s) 68, 77, 1101, 1110, 1637, 1784, 1992, 2326
BstNI CCWGG 4 cut(s) 296, 1287, 1827, 2714
BstNSI RCATGY 2 cut(s) 1182, 2839
BstPI GGTNACC 1 cut(s) 2948
BstSCI CCNGG 5 cut(s) 294, 1285, 1809, 1825, 2712
BstSFI CTRYAG 4 cut(s) 166, 1371, 1785, 1976
BstSLI GKGCMC 2 cut(s) 1032, 2680
BstSNI TACGTA 1 cut(s) 894
BstUI CGCG 1 cut(s) 1631
BstV1I GCAGC 4 cut(s) 216, 221, 1350, 1575
BstV2I GAAGAC 3 cut(s) 2490, 2814, 2844
BstX2I RGATCY 4 cut(s) 160, 261, 904, 2719
BstXI CCANNNNNNTGG 1 cut(s) 2359
BstYI RGATCY 4 cut(s) 160, 261, 904, 2719
Bsu36I CCTNAGG 1 cut(s) 199
BsuRI GGCC 6 cut(s) 736, 1293, 2079, 2289, 2320, 2471
BtgI CCRYGG 1 cut(s) 1105
BtgZI GCGATG 2 cut(s) 267, 2921
BtsCI GGATG 6 cut(s) 188, 384, 743, 802, 1639, 2216
BtsI GCAGTG 1 cut(s) 2094
BtsIMutI CAGTG 7 cut(s) 851, 1032, 1341, 1518, 2094, 2623, 2832
BveI ACCTGC 5 cut(s) 236, 1631, 1841, 1983, 2821
Cac8I GCNNGC 3 cut(s) 64, 250, 2837
CfoI GCGC 1 cut(s) 209
CsiI ACCWGGT 1 cut(s) 2712
Csp6I GTAC 7 cut(s) 104, 243, 381, 1063, 1195, 1441, 2251
CspCI CAANNNNNGTGG 2 cut(s) 306, 341
CviQI GTAC 7 cut(s) 104, 243, 381, 1063, 1195, 1441, 2251
DdeI CTNAG 7 cut(s) 199, 374, 779, 925, 932, 2734, 2955
EaeI YGGCCR 2 cut(s) 2318, 2469
EciI GGCGGA 1 cut(s) 3023
Eco105I TACGTA 1 cut(s) 894
Eco130I CCWWGG 4 cut(s) 23, 1105, 1698, 2723
Eco24I GRGCYC 1 cut(s) 404
Eco32I GATATC 1 cut(s) 2454
Eco47I GGWCC 8 cut(s) 449, 800, 1089, 1763, 1934, 1972, 2063, 2710
Eco57I CTGAAG 2 cut(s) 2784, 2808
Eco72I CACGTG 2 cut(s) 1454, 2276
Eco81I CCTNAGG 1 cut(s) 199
Eco91I GGTNACC 1 cut(s) 2948
EcoNI CCTNNNNNAGG 2 cut(s) 1749, 2372
EcoO109I RGGNCCY 2 cut(s) 449, 2077
EcoO65I GGTNACC 1 cut(s) 2948
EcoRI GAATTC 1 cut(s) 2595
EcoRII CCWGG 4 cut(s) 294, 1285, 1825, 2712
EcoRV GATATC 1 cut(s) 2454
EcoT14I CCWWGG 4 cut(s) 23, 1105, 1698, 2723
EcoT38I GRGCYC 1 cut(s) 404
ErhI CCWWGG 4 cut(s) 23, 1105, 1698, 2723
FalI AAGNNNNNCTT 2 cut(s) 55, 87
FaqI GGGAC 2 cut(s) 1058, 1102
FauI CCCGC 1 cut(s) 371
FbaI TGATCA 1 cut(s) 256
FblI GTMKAC 1 cut(s) 1374
Fnu4HI GCNGC 7 cut(s) 205, 210, 232, 410, 1111, 1339, 1564
FokI GGATG 6 cut(s) 195, 371, 730, 809, 1646, 2223
FriOI GRGCYC 1 cut(s) 404
Fsp4HI GCNGC 7 cut(s) 205, 210, 232, 410, 1111, 1339, 1564
FspBI CTAG 6 cut(s) 24, 413, 707, 720, 1083, 2669
GlaI GCGC 1 cut(s) 208
GluI GCNGC 7 cut(s) 205, 210, 232, 410, 1111, 1339, 1564
GsaI CCCAGC 1 cut(s) 148
GsuI CTGGAG 3 cut(s) 551, 900, 1896
HaeIII GGCC 6 cut(s) 736, 1293, 2079, 2289, 2320, 2471
HapII CCGG 1 cut(s) 1811
HhaI GCGC 1 cut(s) 209
Hin6I GCGC 1 cut(s) 207
HinP1I GCGC 1 cut(s) 207
HindIII AAGCTT 6 cut(s) 64, 108, 944, 2114, 2201, 2474
HinfI GANTC 7 cut(s) 1705, 1755, 2140, 2378, 2732, 2959, 3041
HpaII CCGG 1 cut(s) 1811
HphI GGTGA 8 cut(s) 217, 328, 1243, 1452, 1865, 2183, 2317, 2960
Hpy166II GTNNAC 6 cut(s) 1375, 1542, 1591, 1972, 2071, 2994
Hpy188III TCNNGA 7 cut(s) 180, 519, 530, 2144, 2669, 2861, 3017
Hpy8I GTNNAC 6 cut(s) 1375, 1542, 1591, 1972, 2071, 2994
HpyCH4III ACNGT 6 cut(s) 440, 983, 1283, 1367, 1513, 1539
HpyCH4IV ACGT 4 cut(s) 222, 893, 1453, 2275
HpyF10VI GCNNNNNNNGC 8 cut(s) 68, 77, 1101, 1110, 1637, 1784, 1992, 2326
HpyF3I CTNAG 7 cut(s) 199, 374, 779, 925, 932, 2734, 2955
HpySE526I ACGT 4 cut(s) 222, 893, 1453, 2275
HspAI GCGC 1 cut(s) 207
KpnI GGTACC 1 cut(s) 384
Ksp22I TGATCA 1 cut(s) 256
LmnI GCTCC 7 cut(s) 77, 117, 173, 407, 532, 971, 1524
Lsp1109I GCAGC 4 cut(s) 216, 221, 1350, 1575
LweI GCATC 3 cut(s) 185, 759, 2201
MabI ACCWGGT 1 cut(s) 2712
MaeI CTAG 6 cut(s) 24, 413, 707, 720, 1083, 2669
MaeII ACGT 4 cut(s) 222, 893, 1453, 2275
MaeIII GTNAC 9 cut(s) 223, 271, 415, 973, 1249, 1261, 1346, 1684, 2948
MbiI CCGCTC 1 cut(s) 2643
MfeI CAATTG 5 cut(s) 235, 351, 1096, 1324, 2100
MflI RGATCY 4 cut(s) 160, 261, 904, 2719
MhlI GDGCHC 4 cut(s) 404, 1032, 2281, 2680
MlsI TGGCCA 2 cut(s) 2320, 2471
MluNI TGGCCA 2 cut(s) 2320, 2471
MlyI GAGTC 3 cut(s) 1764, 2726, 2968
MmeI TCCRAC 5 cut(s) 412, 1843, 2292, 2688, 2709
Mox20I TGGCCA 2 cut(s) 2320, 2471
MroXI GAANNNNTTC 2 cut(s) 1147, 1925
MscI TGGCCA 2 cut(s) 2320, 2471
MslI CAYNNNNRTG 1 cut(s) 181
Msp20I TGGCCA 2 cut(s) 2320, 2471
MspA1I CMGCKG 1 cut(s) 212
MspI CCGG 1 cut(s) 1811
MspR9I CCNGG 5 cut(s) 296, 1287, 1811, 1827, 2714
MunI CAATTG 5 cut(s) 235, 351, 1096, 1324, 2100
MvaI CCWGG 4 cut(s) 296, 1287, 1827, 2714
MvnI CGCG 1 cut(s) 1631
MwoI GCNNNNNNNGC 8 cut(s) 68, 77, 1101, 1110, 1637, 1784, 1992, 2326
NciI CCSGG 1 cut(s) 1811
NcoI CCATGG 1 cut(s) 1105
NlaIV GGNNCC 6 cut(s) 382, 403, 1090, 2078, 2538, 2721
NmeAIII GCCGAG 1 cut(s) 1414
NmuCI GTSAC 3 cut(s) 223, 1249, 2948
NspI RCATGY 2 cut(s) 1182, 2839
NspV TTCGAA 1 cut(s) 961
PaeI GCATGC 1 cut(s) 2839
PaqCI CACCTGC 3 cut(s) 236, 1631, 1841
PciI ACATGT 1 cut(s) 1178
PdmI GAANNNNTTC 2 cut(s) 1147, 1925
PfeI GAWTC 4 cut(s) 1705, 2140, 2378, 3041
PflMI CCANNNNNTGG 1 cut(s) 1832
PkrI GCNGC 7 cut(s) 206, 211, 233, 411, 1112, 1340, 1565
PleI GAGTC 3 cut(s) 1763, 2726, 2967
PmaCI CACGTG 2 cut(s) 1454, 2276
PmlI CACGTG 2 cut(s) 1454, 2276
PpsI GAGTC 3 cut(s) 1763, 2726, 2967
Ppu21I YACGTR 3 cut(s) 894, 1454, 2276
PpuMI RGGWCCY 1 cut(s) 449
PscI ACATGT 1 cut(s) 1178
PshBI ATTAAT 2 cut(s) 189, 2892
Psp5II RGGWCCY 1 cut(s) 449
Psp6I CCWGG 4 cut(s) 294, 1285, 1825, 2712
PspCI CACGTG 2 cut(s) 1454, 2276
PspEI GGTNACC 1 cut(s) 2948
PspFI CCCAGC 1 cut(s) 144
PspGI CCWGG 4 cut(s) 294, 1285, 1825, 2712
PspN4I GGNNCC 6 cut(s) 382, 403, 1090, 2078, 2538, 2721
PspPPI RGGWCCY 1 cut(s) 449
PstI CTGCAG 2 cut(s) 1789, 1980
PsuI RGATCY 4 cut(s) 160, 261, 904, 2719
PvuII CAGCTG 1 cut(s) 212
RsaI GTAC 7 cut(s) 105, 244, 382, 1064, 1196, 1442, 2252
RsaNI GTAC 7 cut(s) 104, 243, 381, 1063, 1195, 1441, 2251
RseI CAYNNNNRTG 1 cut(s) 181
SatI GCNGC 7 cut(s) 205, 210, 232, 410, 1111, 1339, 1564
ScaI AGTACT 1 cut(s) 244
SchI GAGTC 3 cut(s) 1764, 2726, 2968
ScrFI CCNGG 5 cut(s) 296, 1287, 1811, 1827, 2714
SduI GDGCHC 4 cut(s) 404, 1032, 2281, 2680
SexAI ACCWGGT 1 cut(s) 2712
SfaNI GCATC 3 cut(s) 185, 759, 2201
SfcI CTRYAG 4 cut(s) 166, 1371, 1785, 1976
SfuI TTCGAA 1 cut(s) 961
SinI GGWCC 8 cut(s) 449, 800, 1089, 1763, 1934, 1972, 2063, 2710
SmiMI CAYNNNNRTG 1 cut(s) 181
SmlI CTYRAG 2 cut(s) 1996, 3015
SmoI CTYRAG 2 cut(s) 1996, 3015
SnaBI TACGTA 1 cut(s) 894
SpeI ACTAGT 2 cut(s) 706, 1082
SphI GCATGC 1 cut(s) 2839
SspI AATATT 3 cut(s) 1893, 2773, 2932
SspMI CTAG 6 cut(s) 24, 413, 707, 720, 1083, 2669
StyD4I CCNGG 5 cut(s) 294, 1285, 1809, 1825, 2712
StyI CCWWGG 4 cut(s) 23, 1105, 1698, 2723
TaaI ACNGT 6 cut(s) 440, 983, 1283, 1367, 1513, 1539
TaiI ACGT 4 cut(s) 225, 896, 1456, 2278
TaqI TCGA 6 cut(s) 85, 391, 823, 961, 2129, 2978
TatI WGTACW 5 cut(s) 103, 242, 1194, 1440, 2250
TauI GCSGC 3 cut(s) 234, 412, 1113
TfiI GAWTC 4 cut(s) 1705, 2140, 2378, 3041
TscAI CASTG 7 cut(s) 858, 1032, 1348, 1518, 2101, 2623, 2832
TseFI GTSAC 3 cut(s) 223, 1249, 2948
TseI GCWGC 4 cut(s) 204, 209, 1338, 1563
Tsp45I GTSAC 3 cut(s) 223, 1249, 2948
TspGWI ACGGA 1 cut(s) 644
TspRI CASTG 7 cut(s) 858, 1032, 1348, 1518, 2101, 2623, 2832
Van91I CCANNNNNTGG 1 cut(s) 1832
VpaK11BI GGWCC 8 cut(s) 449, 800, 1089, 1763, 1934, 1972, 2063, 2710
VspI ATTAAT 2 cut(s) 189, 2892
XagI CCTNNNNNAGG 2 cut(s) 1749, 2372
XapI RAATTY 5 cut(s) 541, 957, 1988, 2147, 2595
XbaI TCTAGA 1 cut(s) 2668
XceI RCATGY 2 cut(s) 1182, 2839
XcmI CCANNNNNNNNNTGG 2 cut(s) 1214, 2824
XmaJI CCTAGG 1 cut(s) 23
XmiI GTMKAC 1 cut(s) 1374
XmnI GAANNNNTTC 2 cut(s) 1147, 1925
XspI CTAG 6 cut(s) 24, 413, 707, 720, 1083, 2669
ZrmI AGTACT 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.