Rroxscaffold_1G00050300

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
70871868 .. 70882110
10243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00050300.1

Sequence Viewer

Length: 2739 bp
ATGGCATCGGCGGGTGGAGGTCGTGTTCCTTGTGGTGGTAGCGGGGTTGTCGTTCTTGTTGTCGGCGGCTTTACACGATCTCTGAAAGCTCAGAATTTGGCAGGAACACTCCCACCAGAGTTGGCGAGGCTTCCCTATCTACAAATAATTTCCCTTGTTGGAAACCGTTTGACAGGTTCTATCCCCATTGAGATCGGAAACATAAGCACCCTGCAAAGTTTGGACATCACTGCCAATAATTTTTCAGGACTACTTCCTCTGGAGCTTGGGAATTTAACCAGCATAGACAGAATGCTTCTTTCCTCGAACAATTTTACTGGGAAGTTGCCCGAAACATTTGCAAGGCTTACCACATTAACGGACTTTCGGGTTGGTGACAGTAACTTTTCTGGGAAGATACCTGATTTCATTCAGAACTGGACAAATCTTAAAAAATTAGTCATTCAGGCTAGTGGTTTGACTGGGCCAATTCCATCCAACATTTCTGTTTTGAAGGAATTAACTGACCTGAGAATTACTGACTTGGATGGACCTGAAGCAACTTTTCCTCGACTTGATAATATGATAGAACTGAAAACACTGATGTTGAGGAATTGCAATCTTACTGGAGAACTACCTAAGTATCTTGCAGATATGACAGAGTTGAAAACCTTAGACCTCAGCTTTAACAAGCTTACTGGGAACATTCCAAGCTCCTTTGTTAATAAAGATGGTTTGGAGTACATGTTCTTAACTGGAAACTTGCTGAATGGAACAATGCCTGAATCGCAGAAAAGAAACAACATTGATCTTTCATACAACAACATGACCGCTAGTGAGACCGACAGTTGTGGCAGTGGCGGCAGAAACTTTTTTGCAAGCTCGTCAAAAGGAAATAAGTCAGTCGTACTCTCTCCGTATAAATTGTGGTGGAAAAAAATAACTGTTACAGAAAATATCACCGAGTCCATAACATATGAAGCAGATGACAATTCAGGCGGTCCTTCATCATTTTACAAAGTCGGAAGCAATTGGGGGTTTAGCAGCACTGGTTACTACCCTGATGATGACCGTCCTCAAGACACCTTTATTGTGTCTAATGAATCTGCACTCTCTATGCCCTATCCTATGACCGATCCTCAGCTGTACATGACCGCACGCGTTTCACCCATCTCTCTAACTTATGTTGGGTTCTGCCTGATTAATGGAAACTACACAGTGAAGCTCCATTTTGCAGAGATAATGTTTACAAATGGCAAAACATATCGTAGCTTGGGAAGACGTATATTTGATGTCTACATTCAGGGGAAACGAGTGCAGAAGGATTTTAATATTGCGGATGCAGCAGGTGGGAATGGTAAATTAGTCATAAGAAACTATACCGCTTCTGTAACAAATCATACCTTGGAGATTCGTTTCTTTTGGAACGGGAAAGGAACACAGGTTATCCCTACTAGAGGAGTCTATGGTCCTCTTATATCTGGCATTTTTGTAGACCCATTTGATTTTATACCCCCGAAAGAACCCTCGCTAGGAAGTGGTATATCGGCAGGTGAAGTCGTTGGAATTGTGGCTGGAGGAGTGTCCATAATATTAGTGATTTTATGTATTCTCTGGTGGAAAGGCTTCATAGGACCACCAAATACTTTGGAACAAGATTTGAAGGGTGTGGACCTGCAGACTGGCAAATTTACCTTGAGGCAAATCAAAACTGCCACGAACAACTTTGACATAGCGAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAGGGGCCTTCTATCAGACAACACTGCAATTGCTGTTAAGAAGCTTTCAGCCAAATCGAAGCAAGGGAATCGTGAATTTGTGAATGAGATAGGCATGATTTCTGCTCTGCAACACCCTCACCTTGTCAAGCTTTATGGATGCTGTATTGAAGGAAATAACTTGTTGCTTGTCTATGAGTACATGGAAAACAATAGTCTCGCACGTGCTCTATTTGGCCCAAAGGAAAGTCAGGTGAAGTTGGACTGGCCAACAAGGCATAGTATTTGTGTTGGTATAGCGAGAGGTTTGGCTTACCTCCATGAGGAATCAAGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTACTTGATAAAAATCTTTTCCCAAAGATATCTGACTTTGGATTGGCCAAGCTTGATGAAGACGATAATACCCACATAAGCACTCGGATTGCTGGAACTTTTGGTTATATGGCACCTGAATATGCAATGCGGGGTTATCTGACCGATAAAGCAGATGTTTATAGTTTCGGAATTCTTGTATTGGAAATGGTCGGTGGAAGGTGCAATACAACTTACCGCTCAAAGGAAGAATGCACTTCTTCTAAAAGAGAGAGCAAGTTTGTTGGACCTGGTGGATCCAAGGTTGGGCTCGAGTTTAACAAAGAAGAGATGATTACCACTATCAATATTGCTCTCCTTTGTGCTAATGCTTCTTCAGCAGTTAGGCCCGCCATGTCTTCGGTGGTGAGCATGCTTGAAGGTAGAGCTTCTGTTCAGGAGGTGGTCTTTGATCCAAATGCCTCAATTAATGAAATCAATGCGATGAGGAAACATTTTCAATCCACTATTGAAGAAAACAATGGTGACCACGAGAGTCGAGACAAACTATGTCAATTGAAGGGTCGTGGACTACTTCATCTACATCTGCTCAAGACCTCTATCCGGTCCGCCCTAATTCATATTATTTTGAGAATAGAAATTAGAGAATTTGAGTAA

Protein Analysis

912

Amino Acids

100.16

Weight (kDa)

8.24

Isoelectric Point (pI)

35.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 26 - 172 6.1e-09 Leucine-rich repeat region
LRR_8 PF13855 190 - 249 1.9e-07 Leucine rich repeat
Malectin PF11721 314 - 489 5.6e-40 Malectin domain
PK_Tyr_Ser-Thr PF07714 571 - 832 3.1e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 571 - 776 2e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1316, 1520
Acc36I ACCTGC 3 cut(s) 1316, 1520, 1662
AccB1I GGYRCC 1 cut(s) 2215
AccBSI CCGCTC 1 cut(s) 2322
AccI GTMKAC 2 cut(s) 1275, 1473
AccII CGCG 1 cut(s) 1140
AclWI GGATC 4 cut(s) 1109, 2373, 2386, 2528
AcoI YGGCCR 2 cut(s) 1997, 2148
AcsI RAATTY 6 cut(s) 94, 271, 1667, 1826, 2274, 2729
AcuI CTGAAG 2 cut(s) 555, 2442
AcvI CACGTG 1 cut(s) 1955
AfaI GTAC 4 cut(s) 722, 888, 1127, 1931
AfiI CCNNNNNNNGG 7 cut(s) 35, 1436, 1511, 2053, 2326, 2388, 2685
AflIII ACRYGT 2 cut(s) 723, 1138
AgsI TTSAA 9 cut(s) 493, 646, 1642, 1901, 2068, 2501, 2582, 2594, 2641
AjnI CCWGG 1 cut(s) 2371
AjuI GAANNNNNNNTTGG 2 cut(s) 1722, 1754
AloI GAACNNNNNNTCC 4 cut(s) 9, 41, 710, 742
Alw21I GWGCWC 1 cut(s) 1960
Alw26I GTCTC 4 cut(s) 812, 1952, 2076, 2616
AlwI GGATC 4 cut(s) 1109, 2373, 2386, 2528
Ama87I CYCGRG 1 cut(s) 2393
AoxI GGCC 6 cut(s) 464, 1756, 1966, 1997, 2148, 2468
ApeKI GCWGC 2 cut(s) 1023, 1322
ApoI RAATTY 6 cut(s) 94, 271, 1667, 1826, 2274, 2729
AseI ATTAAT 2 cut(s) 1182, 2550
Asp700I GAANNNNTTC 1 cut(s) 1604
AsuHPI GGTGA 8 cut(s) 386, 931, 1137, 1544, 1862, 1996, 2500, 2618
AvaI CYCGRG 1 cut(s) 2393
AvaII GGWCC 8 cut(s) 530, 980, 1448, 1613, 1651, 1742, 2369, 2688
BaeI ACNNNNGTAYC 2 cut(s) 605, 638
BalI TGGCCA 2 cut(s) 1999, 2150
BamHI GGATCC 1 cut(s) 2378
BanI GGYRCC 1 cut(s) 2215
BanII GRGCYC 1 cut(s) 2394
BarI GAAGNNNNNNTAC 2 cut(s) 2293, 2325
BauI CACGAG 1 cut(s) 2612
BbrPI CACGTG 1 cut(s) 1955
BbsI GAAGAC 3 cut(s) 1264, 2169, 2472
Bbv12I GWGCWC 1 cut(s) 1960
BbvCI CCTCAGC 2 cut(s) 659, 1119
BbvI GCAGC 2 cut(s) 1035, 1334
BccI CCATC 4 cut(s) 481, 521, 704, 1157
BcgI CGANNNNNNTGC 4 cut(s) 320, 354, 1802, 1836
BciT130I CCWGG 1 cut(s) 2373
BcoDI GTCTC 4 cut(s) 812, 1952, 2076, 2616
BfaI CTAG 4 cut(s) 450, 813, 1434, 1511
BfmI CTRYAG 1 cut(s) 1655
BfuAI ACCTGC 3 cut(s) 1316, 1520, 1662
BglI GCCNNNNNGGC 1 cut(s) 2005
BisI GCNGC 4 cut(s) 67, 841, 1024, 1323
BlsI GCNGC 4 cut(s) 68, 842, 1025, 1324
Bme1390I CCNGG 1 cut(s) 2373
Bme18I GGWCC 8 cut(s) 530, 980, 1448, 1613, 1651, 1742, 2369, 2688
BmeT110I CYCGRG 1 cut(s) 2393
BmiI GGNNCC 3 cut(s) 1757, 2217, 2380
BmrFI CCNGG 1 cut(s) 2373
BmrI ACTGGG 3 cut(s) 327, 471, 687
BmsI GCATC 3 cut(s) 14, 1309, 1880
BmuI ACTGGG 3 cut(s) 327, 471, 687
BpiI GAAGAC 3 cut(s) 1264, 2169, 2472
BpmI CTGGAG 3 cut(s) 281, 627, 1575
Bpu10I CCTNAGC 2 cut(s) 659, 1119
BpuEI CTTGAG 3 cut(s) 1041, 1696, 2657
BsaAI YACGTR 1 cut(s) 1955
BsaBI GATNNNNATC 1 cut(s) 2115
BsaI GGTCTC 1 cut(s) 812
BsaJI CCNNGG 2 cut(s) 1383, 2382
BsaWI WCCGGW 1 cut(s) 2685
BsaXI ACNNNNNCTCC 4 cut(s) 9, 39, 710, 740
Bsc4I CCNNNNNNNGG 7 cut(s) 35, 1436, 1511, 2053, 2326, 2388, 2685
Bse1I ACTGG 9 cut(s) 322, 422, 466, 610, 682, 739, 1033, 1666, 2000
Bse3DI GCAATG 1 cut(s) 2235
Bse8I GATNNNNATC 1 cut(s) 2115
BseBI CCWGG 1 cut(s) 2373
BseDI CCNNGG 2 cut(s) 1383, 2382
BseGI GGATG 4 cut(s) 473, 532, 1324, 1895
BseJI GATNNNNATC 1 cut(s) 2115
BseLI CCNNNNNNNGG 7 cut(s) 35, 1436, 1511, 2053, 2326, 2388, 2685
BseMI GCAATG 1 cut(s) 2235
BseMII CTCAG 4 cut(s) 104, 500, 673, 1133
BseNI ACTGG 9 cut(s) 322, 422, 466, 610, 682, 739, 1033, 1666, 2000
BseRI GAGGAG 2 cut(s) 1452, 1572
BseXI GCAGC 2 cut(s) 1035, 1334
BsgI GTGCAG 2 cut(s) 1071, 1316
Bsh1236I CGCG 1 cut(s) 1140
BshFI GGCC 6 cut(s) 466, 1758, 1968, 1999, 2150, 2470
BshNI GGYRCC 1 cut(s) 2215
BsiHKAI GWGCWC 1 cut(s) 1960
BsiHKCI CYCGRG 1 cut(s) 2393
BsiSI CCGG 1 cut(s) 2686
BslI CCNNNNNNNGG 7 cut(s) 35, 1436, 1511, 2053, 2326, 2388, 2685
BsmAI GTCTC 4 cut(s) 812, 1952, 2076, 2616
BsmI GAATGC 2 cut(s) 297, 2339
BsnI GGCC 6 cut(s) 466, 1758, 1968, 1999, 2150, 2470
Bso31I GGTCTC 1 cut(s) 812
BsoBI CYCGRG 1 cut(s) 2393
Bsp1286I GDGCHC 2 cut(s) 1960, 2394
Bsp1407I TGTACA 1 cut(s) 1125
Bsp143I GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
BspANI GGCC 6 cut(s) 466, 1758, 1968, 1999, 2150, 2470
BspCNI CTCAG 4 cut(s) 103, 501, 672, 1132
BspFNI CGCG 1 cut(s) 1140
BspLI GGNNCC 3 cut(s) 1757, 2217, 2380
BspMAI CTGCAG 1 cut(s) 1659
BspMI ACCTGC 3 cut(s) 1316, 1520, 1662
BspPI GGATC 4 cut(s) 1109, 2373, 2386, 2528
BspT107I GGYRCC 1 cut(s) 2215
BspTNI GGTCTC 1 cut(s) 812
BsrBI CCGCTC 1 cut(s) 2322
BsrDI GCAATG 1 cut(s) 2235
BsrGI TGTACA 1 cut(s) 1125
BsrI ACTGG 9 cut(s) 322, 422, 466, 610, 682, 739, 1033, 1666, 2000
BssECI CCNNGG 2 cut(s) 1383, 2382
BssMI GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
BssSI CACGAG 1 cut(s) 2612
BssT1I CCWWGG 2 cut(s) 1383, 2382
Bst2BI CACGAG 1 cut(s) 2612
Bst2UI CCWGG 1 cut(s) 2373
Bst4CI ACNGT 6 cut(s) 167, 380, 827, 925, 1052, 1198
Bst6I CTCTTC 1 cut(s) 2403
BstAUI TGTACA 1 cut(s) 1125
BstBAI YACGTR 1 cut(s) 1955
BstC8I GCNNGC 4 cut(s) 859, 1138, 2472, 2495
BstDEI CTNAG 6 cut(s) 90, 509, 618, 652, 659, 1119
BstEII GGTNACC 1 cut(s) 2606
BstENI CCTNNNNNAGG 2 cut(s) 1434, 2051
BstF5I GGATG 4 cut(s) 473, 532, 1324, 1895
BstFNI CGCG 1 cut(s) 1140
BstKTI GATC 7 cut(s) 80, 195, 790, 1117, 2073, 2381, 2536
BstMAI GTCTC 4 cut(s) 812, 1952, 2076, 2616
BstMBI GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
BstMWI GCNNNNNNNGC 5 cut(s) 766, 840, 1322, 2005, 2459
BstNI CCWGG 1 cut(s) 2373
BstNSI RCATGY 2 cut(s) 727, 2497
BstPI GGTNACC 1 cut(s) 2606
BstSCI CCNGG 1 cut(s) 2371
BstSFI CTRYAG 1 cut(s) 1655
BstUI CGCG 1 cut(s) 1140
BstV1I GCAGC 2 cut(s) 1035, 1334
BstV2I GAAGAC 3 cut(s) 1264, 2169, 2472
BstX2I RGATCY 1 cut(s) 2378
BstYI RGATCY 1 cut(s) 2378
BsuRI GGCC 6 cut(s) 466, 1758, 1968, 1999, 2150, 2470
BtgZI GCGATG 1 cut(s) 2579
BtsCI GGATG 4 cut(s) 473, 532, 1324, 1895
BtsI GCAGTG 3 cut(s) 228, 841, 1773
BtsIMutI CAGTG 6 cut(s) 228, 578, 841, 1026, 1203, 1773
BveI ACCTGC 3 cut(s) 1316, 1520, 1662
Cac8I GCNNGC 4 cut(s) 859, 1138, 2472, 2495
CpoI CGGWCCG 1 cut(s) 2688
CsiI ACCWGGT 1 cut(s) 2371
Csp6I GTAC 4 cut(s) 721, 887, 1126, 1930
CspCI CAANNNNNGTGG 2 cut(s) 102, 137
CspI CGGWCCG 1 cut(s) 2688
CviAII CATG 8 cut(s) 724, 805, 1129, 1846, 1933, 2051, 2476, 2494
CviQI GTAC 4 cut(s) 721, 887, 1126, 1930
DdeI CTNAG 6 cut(s) 90, 509, 618, 652, 659, 1119
DpnI GATC 7 cut(s) 79, 194, 789, 1116, 2072, 2380, 2535
DpnII GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
EaeI YGGCCR 2 cut(s) 1997, 2148
Eam1104I CTCTTC 1 cut(s) 2403
EarI CTCTTC 1 cut(s) 2403
EciI GGCGGA 1 cut(s) 2680
Eco130I CCWWGG 2 cut(s) 1383, 2382
Eco24I GRGCYC 1 cut(s) 2394
Eco31I GGTCTC 1 cut(s) 812
Eco32I GATATC 1 cut(s) 2133
Eco47I GGWCC 8 cut(s) 530, 980, 1448, 1613, 1651, 1742, 2369, 2688
Eco57I CTGAAG 2 cut(s) 555, 2442
Eco72I CACGTG 1 cut(s) 1955
Eco88I CYCGRG 1 cut(s) 2393
Eco91I GGTNACC 1 cut(s) 2606
EcoNI CCTNNNNNAGG 2 cut(s) 1434, 2051
EcoO109I RGGNCCY 1 cut(s) 1756
EcoO65I GGTNACC 1 cut(s) 2606
EcoRI GAATTC 1 cut(s) 2274
EcoRII CCWGG 1 cut(s) 2371
EcoRV GATATC 1 cut(s) 2133
EcoT14I CCWWGG 2 cut(s) 1383, 2382
EcoT38I GRGCYC 1 cut(s) 2394
ErhI CCWWGG 2 cut(s) 1383, 2382
FaeI CATG 8 cut(s) 727, 808, 1132, 1849, 1936, 2054, 2479, 2497
FatI CATG 8 cut(s) 723, 804, 1128, 1845, 1932, 2050, 2475, 2493
FauI CCCGC 4 cut(s) 4, 35, 2226, 2479
FauNDI CATATG 1 cut(s) 955
FblI GTMKAC 2 cut(s) 1275, 1473
Fnu4HI GCNGC 4 cut(s) 67, 841, 1024, 1323
FokI GGATG 4 cut(s) 460, 539, 1331, 1902
FriOI GRGCYC 1 cut(s) 2394
Fsp4HI GCNGC 4 cut(s) 67, 841, 1024, 1323
FspBI CTAG 4 cut(s) 450, 813, 1434, 1511
GluI GCNGC 4 cut(s) 67, 841, 1024, 1323
GsuI CTGGAG 3 cut(s) 281, 627, 1575
HaeIII GGCC 6 cut(s) 466, 1758, 1968, 1999, 2150, 2470
HapII CCGG 1 cut(s) 2686
Hin1II CATG 8 cut(s) 727, 808, 1132, 1849, 1936, 2054, 2479, 2497
HindIII AAGCTT 4 cut(s) 671, 1793, 1880, 2153
HinfI GANTC 8 cut(s) 764, 944, 1082, 1390, 1440, 1819, 2057, 2617
HpaII CCGG 1 cut(s) 2686
HphI GGTGA 8 cut(s) 386, 931, 1137, 1544, 1862, 1996, 2500, 2618
Hpy166II GTNNAC 6 cut(s) 1227, 1276, 1474, 1651, 1750, 2651
Hpy188III TCNNGA 7 cut(s) 246, 260, 1058, 1823, 2519, 2621, 2674
Hpy8I GTNNAC 6 cut(s) 1227, 1276, 1474, 1651, 1750, 2651
HpyCH4III ACNGT 6 cut(s) 167, 380, 827, 925, 1052, 1198
HpyCH4IV ACGT 2 cut(s) 1261, 1954
HpyF10VI GCNNNNNNNGC 5 cut(s) 766, 840, 1322, 2005, 2459
HpyF3I CTNAG 6 cut(s) 90, 509, 618, 652, 659, 1119
HpySE526I ACGT 2 cut(s) 1261, 1954
Hsp92II CATG 8 cut(s) 727, 808, 1132, 1849, 1936, 2054, 2479, 2497
Kzo9I GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
LmnI GCTCC 3 cut(s) 262, 698, 1209
Lsp1109I GCAGC 2 cut(s) 1035, 1334
LweI GCATC 3 cut(s) 14, 1309, 1880
MabI ACCWGGT 1 cut(s) 2371
MaeI CTAG 4 cut(s) 450, 813, 1434, 1511
MaeII ACGT 2 cut(s) 1261, 1954
MaeIII GTNAC 6 cut(s) 374, 380, 925, 1031, 1369, 2606
MalI GATC 7 cut(s) 79, 194, 789, 1116, 2072, 2380, 2535
MbiI CCGCTC 1 cut(s) 2322
MboI GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
MfeI CAATTG 3 cut(s) 1009, 1779, 2636
MflI RGATCY 1 cut(s) 2378
MhlI GDGCHC 2 cut(s) 1960, 2394
MlsI TGGCCA 2 cut(s) 1999, 2150
MluI ACGCGT 1 cut(s) 1138
MluNI TGGCCA 2 cut(s) 1999, 2150
MlyI GAGTC 3 cut(s) 953, 1449, 2626
MmeI TCCRAC 6 cut(s) 139, 501, 982, 1522, 1971, 2347
Mox20I TGGCCA 2 cut(s) 1999, 2150
MroXI GAANNNNTTC 1 cut(s) 1604
MscI TGGCCA 2 cut(s) 1999, 2150
Msp20I TGGCCA 2 cut(s) 1999, 2150
MspA1I CMGCKG 1 cut(s) 1123
MspI CCGG 1 cut(s) 2686
MspR9I CCNGG 1 cut(s) 2373
MunI CAATTG 3 cut(s) 1009, 1779, 2636
Mva1269I GAATGC 2 cut(s) 297, 2339
MvaI CCWGG 1 cut(s) 2373
MvnI CGCG 1 cut(s) 1140
MwoI GCNNNNNNNGC 5 cut(s) 766, 840, 1322, 2005, 2459
NdeI CATATG 1 cut(s) 955
NdeII GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
NlaIII CATG 8 cut(s) 727, 808, 1132, 1849, 1936, 2054, 2479, 2497
NlaIV GGNNCC 3 cut(s) 1757, 2217, 2380
NmuCI GTSAC 2 cut(s) 374, 2606
NspI RCATGY 2 cut(s) 727, 2497
PaeI GCATGC 1 cut(s) 2497
PaeR7I CTCGAG 1 cut(s) 2393
PaqCI CACCTGC 2 cut(s) 1316, 1520
PciI ACATGT 1 cut(s) 723
PctI GAATGC 2 cut(s) 297, 2339
PdmI GAANNNNTTC 1 cut(s) 1604
PfeI GAWTC 5 cut(s) 764, 1082, 1390, 1819, 2057
PkrI GCNGC 4 cut(s) 68, 842, 1025, 1324
PleI GAGTC 3 cut(s) 952, 1448, 2625
PmaCI CACGTG 1 cut(s) 1955
PmlI CACGTG 1 cut(s) 1955
PpsI GAGTC 3 cut(s) 952, 1448, 2625
Ppu21I YACGTR 1 cut(s) 1955
PscI ACATGT 1 cut(s) 723
PshBI ATTAAT 2 cut(s) 1182, 2550
Psp6I CCWGG 1 cut(s) 2371
PspCI CACGTG 1 cut(s) 1955
PspEI GGTNACC 1 cut(s) 2606
PspGI CCWGG 1 cut(s) 2371
PspN4I GGNNCC 3 cut(s) 1757, 2217, 2380
PspXI VCTCGAGB 1 cut(s) 2393
PstI CTGCAG 1 cut(s) 1659
PsuI RGATCY 1 cut(s) 2378
PvuII CAGCTG 1 cut(s) 1123
RsaI GTAC 4 cut(s) 722, 888, 1127, 1931
RsaNI GTAC 4 cut(s) 721, 887, 1126, 1930
Rsr2I CGGWCCG 1 cut(s) 2688
RsrII CGGWCCG 1 cut(s) 2688
SatI GCNGC 4 cut(s) 67, 841, 1024, 1323
Sau3AI GATC 7 cut(s) 77, 192, 787, 1114, 2070, 2378, 2533
SchI GAGTC 3 cut(s) 953, 1449, 2626
ScrFI CCNGG 1 cut(s) 2373
SduI GDGCHC 2 cut(s) 1960, 2394
SexAI ACCWGGT 1 cut(s) 2371
SfaNI GCATC 3 cut(s) 14, 1309, 1880
SfcI CTRYAG 1 cut(s) 1655
Sfr274I CTCGAG 1 cut(s) 2393
SinI GGWCC 8 cut(s) 530, 980, 1448, 1613, 1651, 1742, 2369, 2688
SlaI CTCGAG 1 cut(s) 2393
SmlI CTYRAG 4 cut(s) 1056, 1675, 2393, 2672
SmoI CTYRAG 4 cut(s) 1056, 1675, 2393, 2672
SphI GCATGC 1 cut(s) 2497
SspI AATATT 3 cut(s) 1312, 1572, 2431
SspMI CTAG 4 cut(s) 450, 813, 1434, 1511
StyD4I CCNGG 1 cut(s) 2371
StyI CCWWGG 2 cut(s) 1383, 2382
TaaI ACNGT 6 cut(s) 167, 380, 827, 925, 1052, 1198
TaiI ACGT 2 cut(s) 1264, 1957
TaqI TCGA 5 cut(s) 305, 550, 1808, 2394, 2620
TaqII GACCGA 3 cut(s) 836, 1127, 2261
TatI WGTACW 3 cut(s) 720, 1125, 1929
TauI GCSGC 2 cut(s) 69, 843
TfiI GAWTC 5 cut(s) 764, 1082, 1390, 1819, 2057
TscAI CASTG 6 cut(s) 235, 585, 841, 1033, 1203, 1780
TseFI GTSAC 2 cut(s) 374, 2606
TseI GCWGC 2 cut(s) 1023, 1322
Tsp45I GTSAC 2 cut(s) 374, 2606
TspGWI ACGGA 2 cut(s) 374, 885
TspRI CASTG 6 cut(s) 235, 585, 841, 1033, 1203, 1780
VpaK11BI GGWCC 8 cut(s) 530, 980, 1448, 1613, 1651, 1742, 2369, 2688
VspI ATTAAT 2 cut(s) 1182, 2550
XagI CCTNNNNNAGG 2 cut(s) 1434, 2051
XapI RAATTY 6 cut(s) 94, 271, 1667, 1826, 2274, 2729
XceI RCATGY 2 cut(s) 727, 2497
XcmI CCANNNNNNNNNTGG 1 cut(s) 2482
XhoI CTCGAG 1 cut(s) 2393
XmiI GTMKAC 2 cut(s) 1275, 1473
XmnI GAANNNNTTC 1 cut(s) 1604
XspI CTAG 4 cut(s) 450, 813, 1434, 1511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.