Rmu_co8359987.1_g000001

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8359987.1
Physical Location & Seq
Forward (+)
1 .. 530
530 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8359987.1_g000001.1.cds

Sequence Viewer

Length: 350 bp
cttcgtacactcttcatataaattgtggcggaaaagaagtacatctctatgaaaattccacaagaccgattatcgcaacatatgaggaagatactgatgaagccgggccttcatcagtttactggaacaggataaattgggcatcaagcacgactggctacttcgctgatgataatcgtcttactaaaacctatacctggactaattcatctggactcactatggcgaatcctgagttgtacatgaatgcaatgcacgcctttctcctatttctcttactatgggtattgtctcggaaatggaagctacacagtaaacctccactttgcagagataatatttacaaatga

Protein Analysis

115

Amino Acids

13.36

Weight (kDa)

6.87

Isoelectric Point (pI)

32.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 29
AcsI RAATTY 1 cut(s) 54
AfaI GTAC 3 cut(s) 7, 41, 241
AfiI CCNNNNNNNGG 1 cut(s) 197
AjnI CCWGG 1 cut(s) 196
AluBI AGCT 1 cut(s) 306
AluI AGCT 1 cut(s) 306
Alw26I GTCTC 1 cut(s) 296
AoxI GGCC 1 cut(s) 106
ApoI RAATTY 1 cut(s) 54
AspS9I GGNCC 1 cut(s) 106
AsuC2I CCSGG 1 cut(s) 105
BciT130I CCWGG 1 cut(s) 198
BcnI CCSGG 1 cut(s) 105
BcoDI GTCTC 1 cut(s) 296
Bme1390I CCNGG 2 cut(s) 105, 198
BmgT120I GGNCC 1 cut(s) 106
BmrFI CCNGG 2 cut(s) 105, 198
BmsI GCATC 1 cut(s) 151
BpuMI CCSGG 1 cut(s) 105
BsaBI GATNNNNATC 1 cut(s) 173
Bsc4I CCNNNNNNNGG 1 cut(s) 197
Bse1I ACTGG 2 cut(s) 127, 159
Bse3DI GCAATG 1 cut(s) 257
Bse8I GATNNNNATC 1 cut(s) 173
BseBI CCWGG 1 cut(s) 198
BseJI GATNNNNATC 1 cut(s) 173
BseLI CCNNNNNNNGG 1 cut(s) 197
BseMI GCAATG 1 cut(s) 257
BseMII CTCAG 1 cut(s) 224
BseNI ACTGG 2 cut(s) 127, 159
BshFI GGCC 1 cut(s) 108
BsiSI CCGG 1 cut(s) 104
BslI CCNNNNNNNGG 1 cut(s) 197
BsmAI GTCTC 1 cut(s) 296
BsmI GAATGC 1 cut(s) 252
BsnI GGCC 1 cut(s) 108
Bsp1407I TGTACA 1 cut(s) 239
BspACI CCGC 1 cut(s) 29
BspANI GGCC 1 cut(s) 108
BspCNI CTCAG 1 cut(s) 225
BsrDI GCAATG 1 cut(s) 257
BsrGI TGTACA 1 cut(s) 239
BsrI ACTGG 2 cut(s) 127, 159
Bst2UI CCWGG 1 cut(s) 198
Bst4CI ACNGT 1 cut(s) 313
Bst6I CTCTTC 1 cut(s) 17
BstAUI TGTACA 1 cut(s) 239
BstC8I GCNNGC 1 cut(s) 257
BstDEI CTNAG 1 cut(s) 233
BstMAI GTCTC 1 cut(s) 296
BstMWI GCNNNNNNNGC 2 cut(s) 155, 256
BstNI CCWGG 1 cut(s) 198
BstSCI CCNGG 2 cut(s) 103, 196
BsuRI GGCC 1 cut(s) 108
Cac8I GCNNGC 1 cut(s) 257
Cfr13I GGNCC 1 cut(s) 106
Csp6I GTAC 3 cut(s) 6, 40, 240
CviAII CATG 1 cut(s) 243
CviJI RGCY 4 cut(s) 103, 108, 158, 306
CviKI_1 RGCY 4 cut(s) 103, 108, 158, 306
CviQI GTAC 3 cut(s) 6, 40, 240
DdeI CTNAG 1 cut(s) 233
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
EciI GGCGGA 1 cut(s) 44
EcoRII CCWGG 1 cut(s) 196
FaeI CATG 1 cut(s) 246
FaiI YATR 9 cut(s) 17, 19, 50, 81, 83, 194, 223, 244, 282
FatI CATG 1 cut(s) 242
FauNDI CATATG 1 cut(s) 81
HaeIII GGCC 1 cut(s) 108
HapII CCGG 1 cut(s) 104
Hin1II CATG 1 cut(s) 246
HinfI GANTC 2 cut(s) 215, 228
HpaII CCGG 1 cut(s) 104
Hpy166II GTNNAC 3 cut(s) 8, 120, 316
Hpy188I TCNGA 1 cut(s) 296
Hpy188III TCNNGA 2 cut(s) 212, 232
Hpy8I GTNNAC 3 cut(s) 8, 120, 316
HpyAV CCTTC 1 cut(s) 119
HpyCH4III ACNGT 1 cut(s) 313
HpyCH4V TGCA 3 cut(s) 250, 255, 329
HpyF10VI GCNNNNNNNGC 2 cut(s) 155, 256
HpyF3I CTNAG 1 cut(s) 233
Hsp92II CATG 1 cut(s) 246
LpnPI CCDG 8 cut(s) 108, 114, 117, 140, 183, 197, 210, 245
LweI GCATC 1 cut(s) 151
MboII GAAGA 2 cut(s) 4, 100
MluCI AATT 4 cut(s) 21, 54, 135, 204
MlyI GAGTC 1 cut(s) 209
MnlI CCTC 2 cut(s) 78, 329
MslI CAYNNNNRTG 1 cut(s) 47
MspI CCGG 1 cut(s) 104
MspR9I CCNGG 2 cut(s) 105, 198
Mva1269I GAATGC 1 cut(s) 252
MvaI CCWGG 1 cut(s) 198
MwoI GCNNNNNNNGC 2 cut(s) 155, 256
NciI CCSGG 1 cut(s) 105
NdeI CATATG 1 cut(s) 81
NlaIII CATG 1 cut(s) 246
PctI GAATGC 1 cut(s) 252
PfeI GAWTC 1 cut(s) 228
PleI GAGTC 1 cut(s) 209
PpsI GAGTC 1 cut(s) 209
Psp6I CCWGG 1 cut(s) 196
PspGI CCWGG 1 cut(s) 196
PspPI GGNCC 1 cut(s) 106
RsaI GTAC 3 cut(s) 7, 41, 241
RsaNI GTAC 3 cut(s) 6, 40, 240
RseI CAYNNNNRTG 1 cut(s) 47
Sau96I GGNCC 1 cut(s) 106
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 2 cut(s) 105, 198
SetI ASST 4 cut(s) 193, 199, 308, 321
SfaNI GCATC 1 cut(s) 151
SmiMI CAYNNNNRTG 1 cut(s) 47
Sse9I AATT 4 cut(s) 21, 54, 135, 204
SsiI CCGC 1 cut(s) 29
SspI AATATT 1 cut(s) 339
StyD4I CCNGG 2 cut(s) 103, 196
TaaI ACNGT 1 cut(s) 313
TaqII GACCGA 1 cut(s) 81
TasI AATT 4 cut(s) 21, 54, 135, 204
TatI WGTACW 2 cut(s) 39, 239
TfiI GAWTC 1 cut(s) 228
TspDTI ATGAA 6 cut(s) 4, 65, 101, 113, 197, 259
XapI RAATTY 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.