RchiOBHm_Chr5g0029781

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
23545701 .. 23549800
4100 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30914

Sequence Viewer

Length: 1752 bp
ATGGTGCGATTGTTACTCAACAGTGGCAGTTGCAGTTGGTACTCTCTCAATATAAATTGTGGAGGAAGTGGAGTAACAGTTGATGGAAGAGCATATGATGAGGATACAGATGCAAATGGACCTTCATTATATTACGAGAGCAGCACAAATTGGGTGTCAAGCAGCACTGGTTACTTCCCTGATGATGACAGTTCTACAGACCACTTTACTTGGTCTACTAATTCATCTAGACACTTGATTGCCAATGCTCAACTATACATGACTGCACGCCTTTCTCCCATCTCTCTAACTTATTATGGATTTTGTCTGGGAAATGGAAACTACACAGTACACCTCCATTTTGCAGAGATAATGTTTACAAATGGTCCAACATATAGCAGCTTAGGAAGGCGCATATTTGATGTTTACATTCAGGGCAAACGAGTGCTGCAGGATTTCAATATTGCTGATGAGGCAGGTGGGGTTGGTAAGGCAGTCATAAAAAACTATACTATTGCTGTAACTACTAATACCTTGGAGATCCGTTTCTTTTGGGCTGGGAAAGGAACCACAGGTATCCCTGTAAGAGGAGTTTATGGTCCTCTTATCTCCGCCATATCTGTATTTCCAGGCTATCTAAGACGAGAAAGGACTTTGGAGCAAGATTTAAAAGGTGTTGACCTGCAAACGGGTAGATTTAGCTTGAGACAAATCAAAGATGCCACAGAAAACTTTGACATAGCCAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCCAACTATCAGATGGCACCATAATTGCTGTTAAGCAGCTTTCTGCCAAATCACAGCAAGGAAATCGTGAGTTTGTGAATGAGATTGGCATGATTTCCGCTCTGCAACACCCTCATCTTGTCAAGCTCTATGGATGCTGCATTGAAGGAAATCAGTTGTTGCTTGTCTATGAGTACATGGAAAACAACAGTGTTGGACGCGCTTTGTTTGGTGCAAAAGAAAGTCAGTTGAAGTTAGATTGGCCAACAAGGCACAGGATTTGTGTTGGTGTTGCAAAAGGTTTGGCTTACCTTCATGAAGAATCACGGTTGAAGATCGTTCATAGAGACATCAAAGCTACTAATGTGCTGCTTGATAAAAATCTTTGCCCGAAGATATCTGACTTTGGCCTAGCCAAGCTTGGTGAAGATGATAGTACCCATATAAGCACTAGGATTGCTGGAACCTATGGATATATGGCACCTGAATATGCAATGCGGGGTTATCTAACTGATAAAGCGGATGTGTATAGTTTTGGAATTCTTGGATTGGAAATGGTCAGTGGAAGGTGCAACACAACTTACCATTCCAAAGGAGAGTGCTTCTACATTCTTGATTGGGCACTTCTTCTGAAAGAGAAAGGAAGTTTGCTAGACCTAGTCGATCCAAGGTTGGGATCAGATTTTAACAAAGAAGACGTGATGATTACCATCAAGGTGGCTCTCCTTTGCTGTAATGTCTCTGCAGCACTTAGGCCTGCCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAGGGCTCGTGTTGAGGAGTTAGTCTTTGATTCAAGTGCCTCATTTCATGAGATCAGTGAAATGAGGAAACATTTTGAATCTAATTACTCATTGGAGACCATCGATGAGAGTACTCAGAGACAAACAATGTCAATCGAAGGGGCGTGCACTTCATCTACATCTGTTCAAGATCTCTATCCAATCAATCCTGATTCAGATTACTGGGAGAACAGAGATTAA

Protein Analysis

583

Amino Acids

64.74

Weight (kDa)

5.63

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 15 - 199 1.7e-44 Malectin domain
PK_Tyr_Ser-Thr PF07714 240 - 437 2.4e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 240 - 438 1.7e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 446
Acc36I ACCTGC 2 cut(s) 446, 669
AccB1I GGYRCC 2 cut(s) 779, 1222
AccBSI CCGCTC 1 cut(s) 863
AccI GTMKAC 1 cut(s) 215
AccII CGCG 1 cut(s) 963
AciI CCGC 4 cut(s) 591, 861, 1240, 1262
AclWI GGATC 3 cut(s) 514, 1400, 1426
AcoI YGGCCR 1 cut(s) 1004
AcsI RAATTY 1 cut(s) 1281
AcuI CTGAAG 1 cut(s) 1494
AfaI GTAC 5 cut(s) 41, 330, 938, 1180, 1645
AfiI CCNNNNNNNGG 3 cut(s) 566, 667, 1415
AgsI TTSAA 8 cut(s) 439, 908, 994, 1075, 1529, 1566, 1610, 1700
AjiI CACGTC 1 cut(s) 1441
AjnI CCWGG 1 cut(s) 607
AjuI GAANNNNNNNTTGG 2 cut(s) 729, 761
AluBI AGCT 6 cut(s) 381, 681, 802, 889, 1100, 1162
AluI AGCT 6 cut(s) 381, 681, 802, 889, 1100, 1162
Alw21I GWGCWC 1 cut(s) 1682
Alw26I GTCTC 5 cut(s) 679, 1083, 1486, 1622, 1645
Alw44I GTGCAC 1 cut(s) 1678
AlwI GGATC 3 cut(s) 514, 1400, 1426
AoxI GGCC 4 cut(s) 763, 1004, 1150, 1496
ApaLI GTGCAC 1 cut(s) 1678
ApeKI GCWGC 8 cut(s) 141, 162, 378, 427, 799, 900, 1111, 1487
ApoI RAATTY 1 cut(s) 1281
ArsI GACNNNNNNTTYG 2 cut(s) 140, 172
AspLEI GCGC 2 cut(s) 393, 965
AspS9I GGNCC 5 cut(s) 119, 365, 578, 749, 763
AsuHPI GGTGA 1 cut(s) 1178
AvaII GGWCC 4 cut(s) 119, 365, 578, 749
BaeGI GKGCMC 2 cut(s) 1366, 1682
BalI TGGCCA 1 cut(s) 1006
BanI GGYRCC 2 cut(s) 779, 1222
BanII GRGCYC 1 cut(s) 1540
BauI CACGAG 1 cut(s) 1539
BbsI GAAGAC 2 cut(s) 1443, 1500
Bbv12I GWGCWC 1 cut(s) 1682
BbvI GCAGC 8 cut(s) 153, 174, 390, 414, 811, 887, 1098, 1499
BccI CCATC 5 cut(s) 77, 287, 770, 1460, 1640
BcgI CGANNNNNNTGC 2 cut(s) 809, 843
BciT130I CCWGG 1 cut(s) 609
BciVI GTATCC 2 cut(s) 97, 566
BcoDI GTCTC 5 cut(s) 679, 1083, 1486, 1622, 1645
BfaI CTAG 5 cut(s) 228, 1154, 1194, 1394, 1400
BfmI CTRYAG 3 cut(s) 195, 428, 1485
BfuAI ACCTGC 2 cut(s) 446, 669
BfuI GTATCC 2 cut(s) 97, 566
BglI GCCNNNNNGGC 1 cut(s) 1012
BglII AGATCT 1 cut(s) 1702
BisI GCNGC 8 cut(s) 142, 163, 379, 428, 800, 901, 1112, 1488
BlsI GCNGC 8 cut(s) 143, 164, 380, 429, 801, 902, 1113, 1489
BmcAI AGTACT 1 cut(s) 1645
Bme1390I CCNGG 1 cut(s) 609
Bme18I GGWCC 4 cut(s) 119, 365, 578, 749
BmgBI CACGTC 1 cut(s) 1441
BmgT120I GGNCC 5 cut(s) 119, 365, 578, 749, 763
BmiI GGNNCC 4 cut(s) 547, 781, 1207, 1224
BmrFI CCNGG 1 cut(s) 609
BmrI ACTGGG 1 cut(s) 1744
BmsI GCATC 3 cut(s) 100, 688, 887
BmuI ACTGGG 1 cut(s) 1744
BpiI GAAGAC 2 cut(s) 1443, 1500
Bpu10I CCTNAGC 1 cut(s) 382
BpuEI CTTGAG 1 cut(s) 703
Bsa29I ATCGAT 1 cut(s) 1635
BsaBI GATNNNNATC 3 cut(s) 1122, 1451, 1707
BsaI GGTCTC 1 cut(s) 1622
BsaJI CCNNGG 2 cut(s) 513, 1409
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
Bsc4I CCNNNNNNNGG 3 cut(s) 566, 667, 1415
Bse1I ACTGG 2 cut(s) 172, 1739
Bse3DI GCAATG 1 cut(s) 1242
Bse8I GATNNNNATC 3 cut(s) 1122, 1451, 1707
BseBI CCWGG 1 cut(s) 609
BseCI ATCGAT 1 cut(s) 1635
BseDI CCNNGG 2 cut(s) 513, 1409
BseGI GGATG 2 cut(s) 902, 1270
BseJI GATNNNNATC 3 cut(s) 1122, 1451, 1707
BseLI CCNNNNNNNGG 3 cut(s) 566, 667, 1415
BseMI GCAATG 1 cut(s) 1242
BseMII CTCAG 1 cut(s) 1661
BseNI ACTGG 2 cut(s) 172, 1739
BseRI GAGGAG 2 cut(s) 582, 1562
BseSI GKGCMC 2 cut(s) 1366, 1682
BseXI GCAGC 8 cut(s) 153, 174, 390, 414, 811, 887, 1098, 1499
BseYI CCCAGC 1 cut(s) 536
BsgI GTGCAG 1 cut(s) 249
Bsh1236I CGCG 1 cut(s) 963
BshFI GGCC 4 cut(s) 765, 1006, 1152, 1498
BshNI GGYRCC 2 cut(s) 779, 1222
BshVI ATCGAT 1 cut(s) 1635
BsiHKAI GWGCWC 1 cut(s) 1682
BslI CCNNNNNNNGG 3 cut(s) 566, 667, 1415
BsmAI GTCTC 5 cut(s) 679, 1083, 1486, 1622, 1645
BsnI GGCC 4 cut(s) 765, 1006, 1152, 1498
Bso31I GGTCTC 1 cut(s) 1622
Bsp1286I GDGCHC 3 cut(s) 1366, 1540, 1682
Bsp143I GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
BspACI CCGC 4 cut(s) 591, 861, 1240, 1262
BspANI GGCC 4 cut(s) 765, 1006, 1152, 1498
BspCNI CTCAG 1 cut(s) 1660
BspDI ATCGAT 1 cut(s) 1635
BspFNI CGCG 1 cut(s) 963
BspHI TCATGA 2 cut(s) 1057, 1579
BspLI GGNNCC 4 cut(s) 547, 781, 1207, 1224
BspMAI CTGCAG 2 cut(s) 432, 1489
BspMI ACCTGC 2 cut(s) 446, 669
BspPI GGATC 3 cut(s) 514, 1400, 1426
BspQI GCTCTTC 1 cut(s) 82
BspT107I GGYRCC 2 cut(s) 779, 1222
BspTNI GGTCTC 1 cut(s) 1622
BsrBI CCGCTC 1 cut(s) 863
BsrDI GCAATG 1 cut(s) 1242
BsrI ACTGG 2 cut(s) 172, 1739
BssECI CCNNGG 2 cut(s) 513, 1409
BssMI GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
BssSI CACGAG 1 cut(s) 1539
BssT1I CCWWGG 2 cut(s) 513, 1409
Bst2BI CACGAG 1 cut(s) 1539
Bst2UI CCWGG 1 cut(s) 609
Bst4CI ACNGT 6 cut(s) 23, 79, 191, 328, 953, 1071
Bst6I CTCTTC 1 cut(s) 82
BstC8I GCNNGC 4 cut(s) 268, 1500, 1523, 1678
BstDEI CTNAG 4 cut(s) 382, 617, 1493, 1647
BstENI CCTNNNNNAGG 1 cut(s) 564
BstF5I GGATG 2 cut(s) 902, 1270
BstFNI CGCG 1 cut(s) 963
BstHHI GCGC 2 cut(s) 393, 965
BstKTI GATC 6 cut(s) 522, 1080, 1408, 1421, 1587, 1705
BstMAI GTCTC 5 cut(s) 679, 1083, 1486, 1622, 1645
BstMBI GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
BstMWI GCNNNNNNNGC 2 cut(s) 452, 1012
BstNI CCWGG 1 cut(s) 609
BstNSI RCATGY 1 cut(s) 1525
BstSCI CCNGG 1 cut(s) 607
BstSFI CTRYAG 3 cut(s) 195, 428, 1485
BstSLI GKGCMC 2 cut(s) 1366, 1682
BstUI CGCG 1 cut(s) 963
BstV1I GCAGC 8 cut(s) 153, 174, 390, 414, 811, 887, 1098, 1499
BstV2I GAAGAC 2 cut(s) 1443, 1500
BstX2I RGATCY 2 cut(s) 519, 1702
BstXI CCANNNNNNTGG 1 cut(s) 1459
BstYI RGATCY 2 cut(s) 519, 1702
Bsu15I ATCGAT 1 cut(s) 1635
BsuI GTATCC 2 cut(s) 97, 566
BsuRI GGCC 4 cut(s) 765, 1006, 1152, 1498
BsuTUI ATCGAT 1 cut(s) 1635
BtrI CACGTC 1 cut(s) 1441
BtsCI GGATG 2 cut(s) 902, 1270
BtsIMutI CAGTG 6 cut(s) 28, 165, 958, 1309, 1518, 1594
BveI ACCTGC 2 cut(s) 446, 669
Cac8I GCNNGC 4 cut(s) 268, 1500, 1523, 1678
CciI TCATGA 2 cut(s) 1057, 1579
CfoI GCGC 2 cut(s) 393, 965
Cfr13I GGNCC 5 cut(s) 119, 365, 578, 749, 763
ClaI ATCGAT 1 cut(s) 1635
CseI GACGC 1 cut(s) 969
Csp6I GTAC 5 cut(s) 40, 329, 937, 1179, 1644
CspCI CAANNNNNGTGG 2 cut(s) 191, 226
CviAII CATG 7 cut(s) 259, 853, 940, 1058, 1504, 1522, 1580
CviQI GTAC 5 cut(s) 40, 329, 937, 1179, 1644
DdeI CTNAG 4 cut(s) 382, 617, 1493, 1647
DpnI GATC 6 cut(s) 521, 1079, 1407, 1420, 1586, 1704
DpnII GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
DraI TTTAAA 1 cut(s) 648
EaeI YGGCCR 1 cut(s) 1004
Eam1104I CTCTTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 82
EciI GGCGGA 1 cut(s) 580
Eco130I CCWWGG 2 cut(s) 513, 1409
Eco147I AGGCCT 1 cut(s) 1498
Eco24I GRGCYC 1 cut(s) 1540
Eco31I GGTCTC 1 cut(s) 1622
Eco32I GATATC 1 cut(s) 1140
Eco47I GGWCC 4 cut(s) 119, 365, 578, 749
Eco57I CTGAAG 1 cut(s) 1494
EcoNI CCTNNNNNAGG 1 cut(s) 564
EcoRI GAATTC 1 cut(s) 1281
EcoRII CCWGG 1 cut(s) 607
EcoRV GATATC 1 cut(s) 1140
EcoT14I CCWWGG 2 cut(s) 513, 1409
EcoT38I GRGCYC 1 cut(s) 1540
ErhI CCWWGG 2 cut(s) 513, 1409
FaeI CATG 7 cut(s) 262, 856, 943, 1061, 1507, 1525, 1583
FatI CATG 7 cut(s) 258, 852, 939, 1057, 1503, 1521, 1579
FauI CCCGC 1 cut(s) 1233
FauNDI CATATG 1 cut(s) 94
FblI GTMKAC 1 cut(s) 215
Fnu4HI GCNGC 8 cut(s) 142, 163, 379, 428, 800, 901, 1112, 1488
FokI GGATG 2 cut(s) 909, 1277
FriOI GRGCYC 1 cut(s) 1540
Fsp4HI GCNGC 8 cut(s) 142, 163, 379, 428, 800, 901, 1112, 1488
FspBI CTAG 5 cut(s) 228, 1154, 1194, 1394, 1400
GlaI GCGC 2 cut(s) 392, 964
GluI GCNGC 8 cut(s) 142, 163, 379, 428, 800, 901, 1112, 1488
GsaI CCCAGC 1 cut(s) 540
HaeIII GGCC 4 cut(s) 765, 1006, 1152, 1498
HgaI GACGC 1 cut(s) 969
HhaI GCGC 2 cut(s) 393, 965
Hin1II CATG 7 cut(s) 262, 856, 943, 1061, 1507, 1525, 1583
Hin6I GCGC 2 cut(s) 391, 963
HinP1I GCGC 2 cut(s) 391, 963
HincII GTYRAC 1 cut(s) 658
HindII GTYRAC 1 cut(s) 658
HindIII AAGCTT 1 cut(s) 1160
HinfI GANTC 4 cut(s) 1064, 1562, 1610, 1724
HphI GGTGA 1 cut(s) 1178
Hpy166II GTNNAC 7 cut(s) 216, 331, 357, 406, 658, 757, 1680
Hpy188I TCNGA 6 cut(s) 775, 1144, 1374, 1423, 1650, 1729
Hpy188III TCNNGA 7 cut(s) 228, 830, 1058, 1355, 1580, 1700, 1721
Hpy8I GTNNAC 7 cut(s) 216, 331, 357, 406, 658, 757, 1680
HpyAV CCTTC 8 cut(s) 132, 381, 731, 902, 1064, 1302, 1523, 1664
HpyCH4III ACNGT 6 cut(s) 23, 79, 191, 328, 953, 1071
HpyCH4IV ACGT 1 cut(s) 1440
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 1012
HpyF3I CTNAG 4 cut(s) 382, 617, 1493, 1647
HpySE526I ACGT 1 cut(s) 1440
Hsp92II CATG 7 cut(s) 262, 856, 943, 1061, 1507, 1525, 1583
HspAI GCGC 2 cut(s) 391, 963
Kzo9I GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
LguI GCTCTTC 1 cut(s) 82
LmnI GCTCC 1 cut(s) 637
Lsp1109I GCAGC 8 cut(s) 153, 174, 390, 414, 811, 887, 1098, 1499
LweI GCATC 3 cut(s) 100, 688, 887
MaeI CTAG 5 cut(s) 228, 1154, 1194, 1394, 1400
MaeII ACGT 1 cut(s) 1440
MaeIII GTNAC 4 cut(s) 12, 73, 170, 499
MalI GATC 6 cut(s) 521, 1079, 1407, 1420, 1586, 1704
MbiI CCGCTC 1 cut(s) 863
MboI GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
MboII GAAGA 8 cut(s) 99, 1073, 1087, 1147, 1181, 1361, 1448, 1500
MflI RGATCY 2 cut(s) 519, 1702
MhlI GDGCHC 3 cut(s) 1366, 1540, 1682
MlsI TGGCCA 1 cut(s) 1006
MluCI AATT 6 cut(s) 55, 148, 220, 786, 1281, 1615
MluNI TGGCCA 1 cut(s) 1006
MmeI TCCRAC 2 cut(s) 392, 937
Mox20I TGGCCA 1 cut(s) 1006
MscI TGGCCA 1 cut(s) 1006
MseI TTAA 4 cut(s) 647, 795, 1428, 1750
MslI CAYNNNNRTG 1 cut(s) 1457
Msp20I TGGCCA 1 cut(s) 1006
MspR9I CCNGG 1 cut(s) 609
MvaI CCWGG 1 cut(s) 609
MvnI CGCG 1 cut(s) 963
MwoI GCNNNNNNNGC 2 cut(s) 452, 1012
NdeI CATATG 1 cut(s) 94
NdeII GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
NlaIII CATG 7 cut(s) 262, 856, 943, 1061, 1507, 1525, 1583
NlaIV GGNNCC 4 cut(s) 547, 781, 1207, 1224
NspI RCATGY 1 cut(s) 1525
PaeI GCATGC 1 cut(s) 1525
PagI TCATGA 2 cut(s) 1057, 1579
PaqCI CACCTGC 1 cut(s) 446
PceI AGGCCT 1 cut(s) 1498
PciSI GCTCTTC 1 cut(s) 82
PfeI GAWTC 4 cut(s) 1064, 1562, 1610, 1724
PflFI GACNNNGTC 1 cut(s) 1400
PkrI GCNGC 8 cut(s) 143, 164, 380, 429, 801, 902, 1113, 1489
Psp6I CCWGG 1 cut(s) 607
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 1 cut(s) 607
PspN4I GGNNCC 4 cut(s) 547, 781, 1207, 1224
PspPI GGNCC 5 cut(s) 119, 365, 578, 749, 763
PstI CTGCAG 2 cut(s) 432, 1489
PsuI RGATCY 2 cut(s) 519, 1702
PsyI GACNNNGTC 1 cut(s) 1400
RsaI GTAC 5 cut(s) 41, 330, 938, 1180, 1645
RsaNI GTAC 5 cut(s) 40, 329, 937, 1179, 1644
RseI CAYNNNNRTG 1 cut(s) 1457
SapI GCTCTTC 1 cut(s) 82
SaqAI TTAA 4 cut(s) 647, 795, 1428, 1750
SatI GCNGC 8 cut(s) 142, 163, 379, 428, 800, 901, 1112, 1488
Sau3AI GATC 6 cut(s) 519, 1077, 1405, 1418, 1584, 1702
Sau96I GGNCC 5 cut(s) 119, 365, 578, 749, 763
ScaI AGTACT 1 cut(s) 1645
ScrFI CCNGG 1 cut(s) 609
SduI GDGCHC 3 cut(s) 1366, 1540, 1682
SfaNI GCATC 3 cut(s) 100, 688, 887
SfcI CTRYAG 3 cut(s) 195, 428, 1485
SinI GGWCC 4 cut(s) 119, 365, 578, 749
SmiMI CAYNNNNRTG 1 cut(s) 1457
SmlI CTYRAG 1 cut(s) 682
SmoI CTYRAG 1 cut(s) 682
SphI GCATGC 1 cut(s) 1525
Sse9I AATT 6 cut(s) 55, 148, 220, 786, 1281, 1615
SseBI AGGCCT 1 cut(s) 1498
SsiI CCGC 4 cut(s) 591, 861, 1240, 1262
SspI AATATT 1 cut(s) 442
SspMI CTAG 5 cut(s) 228, 1154, 1194, 1394, 1400
StuI AGGCCT 1 cut(s) 1498
StyD4I CCNGG 1 cut(s) 607
StyI CCWWGG 2 cut(s) 513, 1409
TaaI ACNGT 6 cut(s) 23, 79, 191, 328, 953, 1071
TaiI ACGT 1 cut(s) 1443
TaqI TCGA 3 cut(s) 1404, 1635, 1668
TasI AATT 6 cut(s) 55, 148, 220, 786, 1281, 1615
TatI WGTACW 3 cut(s) 328, 936, 1643
TfiI GAWTC 4 cut(s) 1064, 1562, 1610, 1724
Tru1I TTAA 4 cut(s) 647, 795, 1428, 1750
Tru9I TTAA 4 cut(s) 647, 795, 1428, 1750
TscAI CASTG 6 cut(s) 28, 172, 958, 1309, 1518, 1594
TseI GCWGC 8 cut(s) 141, 162, 378, 427, 799, 900, 1111, 1487
TspDTI ATGAA 7 cut(s) 114, 213, 1046, 1073, 1074, 1568, 1674
TspGWI ACGGA 1 cut(s) 512
TspRI CASTG 6 cut(s) 28, 172, 958, 1309, 1518, 1594
Tth111I GACNNNGTC 1 cut(s) 1400
VneI GTGCAC 1 cut(s) 1678
VpaK11BI GGWCC 4 cut(s) 119, 365, 578, 749
XagI CCTNNNNNAGG 1 cut(s) 564
XapI RAATTY 1 cut(s) 1281
XbaI TCTAGA 1 cut(s) 227
XceI RCATGY 1 cut(s) 1525
XcmI CCANNNNNNNNNTGG 2 cut(s) 773, 1510
XmiI GTMKAC 1 cut(s) 215
XspI CTAG 5 cut(s) 228, 1154, 1194, 1394, 1400
ZrmI AGTACT 1 cut(s) 1645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.