pycom11g23600

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
26558182 .. 26560424
2243 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g23600.4

Sequence Viewer

Length: 1230 bp
ATGCCTGTAGGTGCCGTGGTTGGAATTGTGGTTGGAGGAGTCTTCATTGTCCTACTGATATTTGGTATTCTTTGGAAGAGAGGCCTCCTAGGACAAAAAAAGACATTGGAGGATGATTTGAAGGGTGTGGACCTGCAAACTGGTAAATTTACCTTCAAGCAACTCAAAGATGCCACAAGCAACTTTGACAAAGCCAATAAGATTGGTGAAGGTGGTTTTGGTTCTGTTTATAAGGGCGTTCTAGCTAATGGAACCGTAATAGCTGTTAAGCAGCTTTCTTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTCATCTTGTCAGGCTCCACGGATGTTGTATTGAAGGAAATCAACTATTGCTTGTCTATGAGTACCTGGAAAATAATAGCGTCGCTCATGCTTTGTTCAGGGAAAAAGAAAGTCATTTGAAGTTGGATTGGCCAACAAGGCACAAGATTTGCATTGGTACAGCAAGAGGTTTGGCTTATCTTCATGAGGAATCAAGATTGAAGGTCGTTCATAGAGACATCAAGGCTACTAATGTTCTGCTTGATAAAAATCTTAACCCGAAAATATCTGATTTTGGATTGGCCAAACTTGATGAAGAGGATAATACACACATTAGCACTCGTATTGCTGGAACTTATGGATATATGGCGCCCGAATATGCAATGCGGGGTTATCTGACTGATAAAGCAGATGTCTATAGTTTTGGTATTCTTGTATTGGAAATTGTTAGTGGGAGAAACAACACAACTTACCGGAAAAAGGAAGAAAGCTTTTATCTTCTTGATTGGGCACGACTTCTAAAAGATCAGGGGGATTTGATGGACCTAGTTGATCCAAGGTTGGGATCAGACTTTAATAAAGAGGAGATGATTGTTGCAATCAATGTGGCTCTCCTTTGTTGCAATGTTACTTCGACAGCTAGGCCTACCATGTCTTCGGTTGTGAGCATGCTTGAAGGAAAGACTATTGTTCATGAGTCGGTCTTGAATCCAAATGCTGAGAGTATTAAGATTGATGCAATGAGGAAACATTTTCAATCTAGTTTTGGAAGGGGCACGGGCGAGAAACAGATAGAAATGGGGTTAACTGAAGGGCCATGGACTGCTTCGTCTGCGTCTGCTCACGATCTGTATCCCGTCAATCCTGATTCAGATTACTGGGAGAACAGAAGCGAGAGAACTTGA

Protein Analysis

410

Amino Acids

45.5

Weight (kDa)

6.87

Isoelectric Point (pI)

25.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 231
AasI GACNNNNNNGTC 1 cut(s) 1153
Acc36I ACCTGC 1 cut(s) 141
AccB1I GGYRCC 2 cut(s) 11, 694
AciI CCGC 1 cut(s) 712
AclWI GGATC 2 cut(s) 872, 898
AcoI YGGCCR 2 cut(s) 476, 627
AcsI RAATTY 2 cut(s) 146, 305
AcuI CTGAAG 1 cut(s) 1155
AcyI GRCGYC 1 cut(s) 695
AfaI GTAC 2 cut(s) 410, 505
AfiI CCNNNNNNNGG 2 cut(s) 805, 887
AgsI TTSAA 8 cut(s) 121, 157, 380, 466, 547, 1001, 1033, 1082
AjnI CCWGG 1 cut(s) 411
AjuI GAANNNNNNNTTGG 2 cut(s) 201, 233
AluBI AGCT 5 cut(s) 245, 263, 274, 816, 965
AluI AGCT 5 cut(s) 245, 263, 274, 816, 965
Alw26I GTCTC 1 cut(s) 555
AlwI GGATC 2 cut(s) 872, 898
AoxI GGCC 5 cut(s) 82, 476, 627, 968, 1139
ApeKI GCWGC 1 cut(s) 271
ApoI RAATTY 2 cut(s) 146, 305
AspA2I CCTAGG 1 cut(s) 88
AspLEI GCGC 1 cut(s) 697
AspS9I GGNCC 3 cut(s) 130, 868, 1139
AsuHPI GGTGA 1 cut(s) 218
AvaII GGWCC 2 cut(s) 130, 868
AvrII CCTAGG 1 cut(s) 88
BaeGI GKGCMC 2 cut(s) 838, 1103
BalI TGGCCA 2 cut(s) 478, 629
BanI GGYRCC 2 cut(s) 11, 694
BbsI GAAGAC 2 cut(s) 34, 972
BbvI GCAGC 1 cut(s) 283
BccI CCATC 1 cut(s) 859
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BciT130I CCWGG 1 cut(s) 413
BciVI GTATCC 1 cut(s) 1188
BcoDI GTCTC 1 cut(s) 555
BfaI CTAG 5 cut(s) 89, 242, 872, 966, 1086
BfmI CTRYAG 2 cut(s) 6, 742
BfoI RGCGCY 1 cut(s) 698
BfuAI ACCTGC 1 cut(s) 141
BfuI GTATCC 1 cut(s) 1188
BglI GCCNNNNNGGC 1 cut(s) 484
BisI GCNGC 1 cut(s) 272
BlnI CCTAGG 1 cut(s) 88
BlsI GCNGC 1 cut(s) 273
Bme1390I CCNGG 1 cut(s) 413
Bme18I GGWCC 2 cut(s) 130, 868
BmgT120I GGNCC 3 cut(s) 130, 868, 1139
BmiI GGNNCC 4 cut(s) 13, 253, 362, 696
BmrFI CCNGG 1 cut(s) 413
BmrI ACTGGG 1 cut(s) 1213
BmsI GCATC 2 cut(s) 160, 1051
BmuI ACTGGG 1 cut(s) 1213
BpiI GAAGAC 2 cut(s) 34, 972
BsaBI GATNNNNATC 2 cut(s) 594, 1176
BsaHI GRCGYC 1 cut(s) 695
BsaJI CCNNGG 5 cut(s) 15, 88, 364, 881, 1142
BsaWI WCCGGW 1 cut(s) 798
Bsc4I CCNNNNNNNGG 2 cut(s) 805, 887
Bse1I ACTGG 2 cut(s) 145, 1208
Bse3DI GCAATG 3 cut(s) 714, 955, 1071
Bse8I GATNNNNATC 2 cut(s) 594, 1176
BseBI CCWGG 1 cut(s) 413
BseDI CCNNGG 5 cut(s) 15, 88, 364, 881, 1142
BseGI GGATG 2 cut(s) 118, 374
BseJI GATNNNNATC 2 cut(s) 594, 1176
BseLI CCNNNNNNNGG 2 cut(s) 805, 887
BseMI GCAATG 3 cut(s) 714, 955, 1071
BseMII CTCAG 1 cut(s) 1035
BseNI ACTGG 2 cut(s) 145, 1208
BseRI GAGGAG 2 cut(s) 51, 923
BseSI GKGCMC 2 cut(s) 838, 1103
BseXI GCAGC 1 cut(s) 283
BshFI GGCC 5 cut(s) 84, 478, 629, 970, 1141
BshNI GGYRCC 2 cut(s) 11, 694
BsiSI CCGG 1 cut(s) 799
BslI CCNNNNNNNGG 2 cut(s) 805, 887
BsmAI GTCTC 1 cut(s) 555
BsnI GGCC 5 cut(s) 84, 478, 629, 970, 1141
Bsp1286I GDGCHC 2 cut(s) 838, 1103
Bsp143I GATC 4 cut(s) 850, 877, 890, 1171
Bsp19I CCATGG 1 cut(s) 1142
BspACI CCGC 1 cut(s) 712
BspANI GGCC 5 cut(s) 84, 478, 629, 970, 1141
BspCNI CTCAG 1 cut(s) 1036
BspHI TCATGA 2 cut(s) 529, 1018
BspLI GGNNCC 4 cut(s) 13, 253, 362, 696
BspMI ACCTGC 1 cut(s) 141
BspPI GGATC 2 cut(s) 872, 898
BspT107I GGYRCC 2 cut(s) 11, 694
BsrDI GCAATG 3 cut(s) 714, 955, 1071
BsrI ACTGG 2 cut(s) 145, 1208
BssECI CCNNGG 5 cut(s) 15, 88, 364, 881, 1142
BssMI GATC 4 cut(s) 850, 877, 890, 1171
BssNI GRCGYC 1 cut(s) 695
BssT1I CCWWGG 3 cut(s) 88, 881, 1142
Bst2UI CCWGG 1 cut(s) 413
Bst4CI ACNGT 1 cut(s) 256
Bst6I CTCTTC 2 cut(s) 71, 636
BstACI GRCGYC 1 cut(s) 695
BstC8I GCNNGC 1 cut(s) 995
BstDEI CTNAG 1 cut(s) 1044
BstDSI CCRYGG 3 cut(s) 15, 364, 1142
BstF5I GGATG 2 cut(s) 118, 374
BstH2I RGCGCY 1 cut(s) 698
BstHHI GCGC 1 cut(s) 697
BstKTI GATC 4 cut(s) 853, 880, 893, 1174
BstMAI GTCTC 1 cut(s) 555
BstMBI GATC 4 cut(s) 850, 877, 890, 1171
BstMWI GCNNNNNNNGC 2 cut(s) 484, 1157
BstNI CCWGG 1 cut(s) 413
BstNSI RCATGY 1 cut(s) 997
BstSCI CCNGG 1 cut(s) 411
BstSFI CTRYAG 2 cut(s) 6, 742
BstSLI GKGCMC 2 cut(s) 838, 1103
BstV1I GCAGC 1 cut(s) 283
BstV2I GAAGAC 2 cut(s) 34, 972
BsuI GTATCC 1 cut(s) 1188
BsuRI GGCC 5 cut(s) 84, 478, 629, 970, 1141
BtgI CCRYGG 3 cut(s) 15, 364, 1142
BtsCI GGATG 2 cut(s) 118, 374
BveI ACCTGC 1 cut(s) 141
Cac8I GCNNGC 1 cut(s) 995
CciI TCATGA 2 cut(s) 529, 1018
CfoI GCGC 1 cut(s) 697
Cfr13I GGNCC 3 cut(s) 130, 868, 1139
CseI GACGC 2 cut(s) 415, 1149
Csp6I GTAC 2 cut(s) 409, 504
CspCI CAANNNNNGTGG 4 cut(s) 353, 388, 912, 947
CviAII CATG 7 cut(s) 325, 434, 530, 976, 994, 1019, 1143
CviQI GTAC 2 cut(s) 409, 504
DdeI CTNAG 1 cut(s) 1044
DinI GGCGCC 1 cut(s) 696
DpnI GATC 4 cut(s) 852, 879, 892, 1173
DpnII GATC 4 cut(s) 850, 877, 890, 1171
DrdI GACNNNNNNGTC 1 cut(s) 1153
DseDI GACNNNNNNGTC 1 cut(s) 1153
EaeI YGGCCR 2 cut(s) 476, 627
Eam1104I CTCTTC 2 cut(s) 71, 636
EarI CTCTTC 2 cut(s) 71, 636
Eco130I CCWWGG 3 cut(s) 88, 881, 1142
Eco147I AGGCCT 2 cut(s) 84, 970
Eco47I GGWCC 2 cut(s) 130, 868
Eco57I CTGAAG 1 cut(s) 1155
EcoRII CCWGG 1 cut(s) 411
EcoT14I CCWWGG 3 cut(s) 88, 881, 1142
EgeI GGCGCC 1 cut(s) 696
EheI GGCGCC 1 cut(s) 696
ErhI CCWWGG 3 cut(s) 88, 881, 1142
FaeI CATG 7 cut(s) 328, 437, 533, 979, 997, 1022, 1146
FatI CATG 7 cut(s) 324, 433, 529, 975, 993, 1018, 1142
FauI CCCGC 1 cut(s) 705
Fnu4HI GCNGC 1 cut(s) 272
FokI GGATG 2 cut(s) 125, 381
Fsp4HI GCNGC 1 cut(s) 272
FspBI CTAG 5 cut(s) 89, 242, 872, 966, 1086
GlaI GCGC 1 cut(s) 696
GluI GCNGC 1 cut(s) 272
HaeII RGCGCY 1 cut(s) 698
HaeIII GGCC 5 cut(s) 84, 478, 629, 970, 1141
HapII CCGG 1 cut(s) 799
HgaI GACGC 2 cut(s) 415, 1149
HhaI GCGC 1 cut(s) 697
Hin1I GRCGYC 1 cut(s) 695
Hin1II CATG 7 cut(s) 328, 437, 533, 979, 997, 1022, 1146
Hin6I GCGC 1 cut(s) 695
HinP1I GCGC 1 cut(s) 695
HincII GTYRAC 1 cut(s) 1131
HindII GTYRAC 1 cut(s) 1131
HindIII AAGCTT 1 cut(s) 814
HinfI GANTC 6 cut(s) 39, 298, 536, 1022, 1033, 1193
HpaI GTTAAC 1 cut(s) 1131
HpaII CCGG 1 cut(s) 799
HphI GGTGA 1 cut(s) 218
Hpy166II GTNNAC 2 cut(s) 130, 1131
Hpy188I TCNGA 4 cut(s) 616, 723, 895, 1198
Hpy188III TCNNGA 8 cut(s) 302, 530, 540, 827, 1019, 1030, 1169, 1190
Hpy8I GTNNAC 2 cut(s) 130, 1131
Hpy99I CGWCG 1 cut(s) 431
HpyAV CCTTC 8 cut(s) 115, 163, 203, 374, 541, 995, 1089, 1130
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4V TGCA 7 cut(s) 136, 340, 498, 707, 923, 948, 1064
HpyF10VI GCNNNNNNNGC 2 cut(s) 484, 1157
HpyF3I CTNAG 1 cut(s) 1044
Hsp92I GRCGYC 1 cut(s) 695
Hsp92II CATG 7 cut(s) 328, 437, 533, 979, 997, 1022, 1146
HspAI GCGC 1 cut(s) 695
KasI GGCGCC 1 cut(s) 694
KspAI GTTAAC 1 cut(s) 1131
Kzo9I GATC 4 cut(s) 850, 877, 890, 1171
LmnI GCTCC 1 cut(s) 366
Lsp1109I GCAGC 1 cut(s) 283
LweI GCATC 2 cut(s) 160, 1051
MaeI CTAG 5 cut(s) 89, 242, 872, 966, 1086
MaeIII GTNAC 1 cut(s) 952
MalI GATC 4 cut(s) 852, 879, 892, 1173
MboI GATC 4 cut(s) 850, 877, 890, 1171
MboII GAAGA 8 cut(s) 34, 88, 270, 518, 653, 815, 821, 972
MhlI GDGCHC 2 cut(s) 838, 1103
MlsI TGGCCA 2 cut(s) 478, 629
MluCI AATT 4 cut(s) 24, 146, 305, 768
MluNI TGGCCA 2 cut(s) 478, 629
Mly113I GGCGCC 1 cut(s) 695
MlyI GAGTC 2 cut(s) 48, 1031
MmeI TCCRAC 2 cut(s) 13, 450
Mox20I TGGCCA 2 cut(s) 478, 629
MscI TGGCCA 2 cut(s) 478, 629
MseI TTAA 6 cut(s) 267, 312, 600, 900, 1053, 1130
Msp20I TGGCCA 2 cut(s) 478, 629
MspI CCGG 1 cut(s) 799
MspR9I CCNGG 1 cut(s) 413
MvaI CCWGG 1 cut(s) 413
MwoI GCNNNNNNNGC 2 cut(s) 484, 1157
NarI GGCGCC 1 cut(s) 695
NcoI CCATGG 1 cut(s) 1142
NdeII GATC 4 cut(s) 850, 877, 890, 1171
NlaIII CATG 7 cut(s) 328, 437, 533, 979, 997, 1022, 1146
NlaIV GGNNCC 4 cut(s) 13, 253, 362, 696
NspI RCATGY 1 cut(s) 997
PaeI GCATGC 1 cut(s) 997
PagI TCATGA 2 cut(s) 529, 1018
PceI AGGCCT 2 cut(s) 84, 970
PfeI GAWTC 4 cut(s) 298, 536, 1033, 1193
PkrI GCNGC 1 cut(s) 273
PleI GAGTC 2 cut(s) 47, 1030
PluTI GGCGCC 1 cut(s) 698
PpsI GAGTC 2 cut(s) 47, 1030
PsiI TTATAA 1 cut(s) 231
Psp6I CCWGG 1 cut(s) 411
PspGI CCWGG 1 cut(s) 411
PspN4I GGNNCC 4 cut(s) 13, 253, 362, 696
PspPI GGNCC 3 cut(s) 130, 868, 1139
RsaI GTAC 2 cut(s) 410, 505
RsaNI GTAC 2 cut(s) 409, 504
SaqAI TTAA 6 cut(s) 267, 312, 600, 900, 1053, 1130
SatI GCNGC 1 cut(s) 272
Sau3AI GATC 4 cut(s) 850, 877, 890, 1171
Sau96I GGNCC 3 cut(s) 130, 868, 1139
SchI GAGTC 2 cut(s) 48, 1031
ScrFI CCNGG 1 cut(s) 413
SduI GDGCHC 2 cut(s) 838, 1103
SfaNI GCATC 2 cut(s) 160, 1051
SfcI CTRYAG 2 cut(s) 6, 742
SfoI GGCGCC 1 cut(s) 696
SinI GGWCC 2 cut(s) 130, 868
SphI GCATGC 1 cut(s) 997
Sse9I AATT 4 cut(s) 24, 146, 305, 768
SseBI AGGCCT 2 cut(s) 84, 970
SsiI CCGC 1 cut(s) 712
SspDI GGCGCC 1 cut(s) 694
SspMI CTAG 5 cut(s) 89, 242, 872, 966, 1086
StuI AGGCCT 2 cut(s) 84, 970
StyD4I CCNGG 1 cut(s) 411
StyI CCWWGG 3 cut(s) 88, 881, 1142
TaaI ACNGT 1 cut(s) 256
TaqI TCGA 1 cut(s) 959
TaqII GACCGA 1 cut(s) 1015
TasI AATT 4 cut(s) 24, 146, 305, 768
TfiI GAWTC 4 cut(s) 298, 536, 1033, 1193
Tru1I TTAA 6 cut(s) 267, 312, 600, 900, 1053, 1130
Tru9I TTAA 6 cut(s) 267, 312, 600, 900, 1053, 1130
TseI GCWGC 1 cut(s) 271
TspDTI ATGAA 5 cut(s) 34, 518, 545, 654, 1007
TspGWI ACGGA 1 cut(s) 381
VpaK11BI GGWCC 2 cut(s) 130, 868
XapI RAATTY 2 cut(s) 146, 305
XceI RCATGY 1 cut(s) 997
XmaJI CCTAGG 1 cut(s) 88
XspI CTAG 5 cut(s) 89, 242, 872, 966, 1086
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.