Rw0G019060

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00858
OG0000292
Physical Location & Seq
Forward (+)
1477 .. 12160
10684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G019060.1

Sequence Viewer

Length: 1926 bp
ATGCTGACCGGAACTGTGCCAGATGATTGGATGAAAGCCAATAGCATTGATCTTTCATATAACAAATTCACCATCAACTCAAATGATGAGAATTGTGAACCACGAGATGGCTTGAACTTGTTTGCAAGCTCTTCAGGTGGCAATACTTCATTTGTTTCATGTTTACCACTTGCAAAATGTCCGGGCCTTCATCAGTTTTACCTGAGCAGGACAAATTGGGCATCAAGCACAACTGGCTACTTCGCTGATAATCGTCTTACTAAAACCTATACCTGGACTAATTCATCTGGACTCAATATGGCGAATCCTGAGTTGTACATGAATGCACGCCTTTCTCCTATTTCTCTAACGTACTATGGGTTTTGTCTCGGTAATGGAAGCTACACAGTAAACCTCCACTTTGCAGAGATAATATTTACAAATGACACAACATATAGTAGCCTGGGAAGACGTGTATTCGATATATACATTCAGGGGTCACTAGCGTTCAAGGATTTCAATATTGCAGATGCTGCAGGTGGCTTTGGAAACGCAGTCACAAAAAAGTTCACTGCTAACGTAACTGCTGGTACTTTGGAGATCCGTTTATTCTGGGCTGGGAAAGGGACAACAGGTGTTCCTTACAGAGGAGACTATGGTCCTCTTATATCAGCTATCTCTATAGATTCTGAAACCCAGCCAGGAGGTGGAAGCAGCGGTATATCAGCAGGTGCAGTGATTGGAATCGTAGCTGGAGGAGTCTTCATTATATTACTGGTTTTAGGAATTCTCTGGTGGAAAGGGTTCATAGGACCAGCAAATACTTTAGAACAAGATTTGAAGGGTGTGGACCTGCAAACCAGCAGATTTACCTTGAGGCAAATCAAAGTTGCCACAAACAACTTTGACATATCAAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTACAAGGGCCTTCTATCAGATGACACCGCAATTGCTGTTAAGAAGCTTTCTGCCAAATCAAAGCAAGGGAATCGTGAATTTGTGAATGAGATTGGCATGATTTCTGCTCTGCAACACCCATACCTCGTCAAGCTTTATGGATGTTGTATTGAAGGAAATGACTTGTTGCTTGTCTATGAGTACTTGGAAAATAATAGCGTTGCTCGTGCTCTGTTTGGTCCAAAAGCAAGCCAGGTGAAGATGGATTGGCCAACAAGGCACAGGATCTGTGTTGGTATAGCAAAAGGTTTGGCTTACCTCCATGAGGAATCAAGGTTGAAGATCGTTCATAGAGACATTAAAGCTACTAATGTGCTACTCGATAAAAATCTTTGTCCAAAGATAGCTGATTTTGGATTGGCCAAGCTTGATGAACAGGATAATACCCACATAAGCACCCGGATTGCTGGAACTCTAGGATATATGGCACCTGAATATGCAATGCGGGGTTATCTGACTGATAAAGCAGATGTTTATAGTTTCGGAATTGTTGTGTTGGAAATAGTCAGTGGGAGGAGTAACACAACTTACCGCTCCGAAGAAGAATGTTTTTATCTTCTTGATTGGGCACTTCTTCTAAAGGAGAGAGGGAGTTTGTTGGACCTAGTGGATCCAAGGCTAGGCTCACAGTTTAACAAAGAACAGATGATTACTACAATCAATGTGGCTCTCCTTTGCTCTCATGTGTCTTCGGCAGTTAGGCCTTCCATGTCTTCAGTGGTGAAAATGCTTGAAGGCAGGGCTTCGGTTCAGGAGGTGATCTCTGATCCAAATGCCTCAAACAATGAAATCAATGCAATGAGGAAACATTTTCAATCCAGTTTCGAAGAAAACAATGGTGACCTTGAGAGTCAGAGACAAACTATGTCAATTGAACCATCGTGGACTACTTCATCTACATCTGCTCATGATCTCTATTCCGTCCATCCTGATTCCAGTTATTGGGAGAACAGAAAATAG

Protein Analysis

641

Amino Acids

70.46

Weight (kDa)

6.17

Isoelectric Point (pI)

30.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 92 - 219 1.5e-36 Malectin domain
Pkinase PF00069 296 - 498 3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 297 - 502 2.6e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 506, 698
Acc36I ACCTGC 3 cut(s) 506, 698, 840
AccB1I GGYRCC 1 cut(s) 1393
AccB7I CCANNNNNTGG 3 cut(s) 107, 686, 1908
AccBSI CCGCTC 1 cut(s) 1500
AciI CCGC 4 cut(s) 696, 954, 1411, 1498
AclWI GGATC 5 cut(s) 574, 1199, 1571, 1584, 1727
AcoI YGGCCR 2 cut(s) 1175, 1326
AcsI RAATTY 3 cut(s) 65, 765, 1004
AcuI CTGAAG 2 cut(s) 117, 1665
AfaI GTAC 4 cut(s) 317, 353, 571, 1109
AfiI CCNNNNNNNGG 7 cut(s) 107, 273, 626, 686, 1231, 1586, 1908
AflIII ACRYGT 1 cut(s) 451
AgsI TTSAA 9 cut(s) 115, 490, 499, 820, 1079, 1246, 1700, 1781, 1841
AjiI CACGTC 1 cut(s) 452
AjnI CCWGG 4 cut(s) 272, 441, 679, 1158
AjuI GAANNNNNNNTTGG 2 cut(s) 900, 932
AluBI AGCT 9 cut(s) 129, 381, 653, 731, 973, 1060, 1271, 1313, 1333
AluI AGCT 9 cut(s) 129, 381, 653, 731, 973, 1060, 1271, 1313, 1333
Alw21I GWGCWC 1 cut(s) 1138
Alw26I GTCTC 4 cut(s) 371, 624, 1254, 1816
AlwI GGATC 5 cut(s) 574, 1199, 1571, 1584, 1727
AlwNI CAGNNNCTG 2 cut(s) 512, 1194
AoxI GGCC 5 cut(s) 184, 934, 1175, 1326, 1667
ApeKI GCWGC 2 cut(s) 512, 693
ApoI RAATTY 3 cut(s) 65, 765, 1004
Asp700I GAANNNNTTC 1 cut(s) 782
AspS9I GGNCC 8 cut(s) 184, 638, 791, 829, 920, 934, 1145, 1567
AsuC2I CCSGG 2 cut(s) 183, 1366
AsuHPI GGTGA 5 cut(s) 61, 1174, 1699, 1735, 1817
AsuII TTCGAA 1 cut(s) 1791
AvaII GGWCC 6 cut(s) 638, 791, 829, 920, 1145, 1567
BaeGI GKGCMC 1 cut(s) 1537
BalI TGGCCA 2 cut(s) 1177, 1328
BamHI GGATCC 1 cut(s) 1576
BanI GGYRCC 1 cut(s) 1393
BauI CACGAG 2 cut(s) 102, 1131
BbsI GAAGAC 4 cut(s) 454, 733, 1647, 1671
Bbv12I GWGCWC 1 cut(s) 1138
BbvI GCAGC 2 cut(s) 499, 705
BccI CCATC 5 cut(s) 80, 101, 1162, 1852, 1899
BcgI CGANNNNNNTGC 2 cut(s) 980, 1014
BciT130I CCWGG 4 cut(s) 274, 443, 681, 1160
BcnI CCSGG 2 cut(s) 183, 1366
BcoDI GTCTC 4 cut(s) 371, 624, 1254, 1816
BfaI CTAG 4 cut(s) 482, 1382, 1571, 1586
BfmI CTRYAG 2 cut(s) 513, 660
BfuAI ACCTGC 3 cut(s) 506, 698, 840
BglI GCCNNNNNGGC 1 cut(s) 1183
BisI GCNGC 2 cut(s) 513, 694
BlsI GCNGC 2 cut(s) 514, 695
BmcAI AGTACT 1 cut(s) 1109
Bme1390I CCNGG 6 cut(s) 183, 274, 443, 681, 1160, 1366
Bme18I GGWCC 6 cut(s) 638, 791, 829, 920, 1145, 1567
BmgBI CACGTC 1 cut(s) 452
BmgT120I GGNCC 8 cut(s) 184, 638, 791, 829, 920, 934, 1145, 1567
BmiI GGNNCC 2 cut(s) 1395, 1578
BmrFI CCNGG 6 cut(s) 183, 274, 443, 681, 1160, 1366
BmsI GCATC 2 cut(s) 230, 499
BoxI GACNNNNGTC 1 cut(s) 636
BpiI GAAGAC 4 cut(s) 454, 733, 1647, 1671
BplI GAGNNNNNCTC 2 cut(s) 1712, 1744
BpmI CTGGAG 1 cut(s) 753
Bpu10I CCTNAGC 1 cut(s) 203
Bpu14I TTCGAA 1 cut(s) 1791
BpuEI CTTGAG 2 cut(s) 874, 1832
BpuMI CCSGG 2 cut(s) 183, 1366
BsaBI GATNNNNATC 2 cut(s) 722, 1293
BsaJI CCNNGG 2 cut(s) 442, 1580
BsaWI WCCGGW 1 cut(s) 8
Bsc4I CCNNNNNNNGG 7 cut(s) 107, 273, 626, 686, 1231, 1586, 1908
Bse1I ACTGG 4 cut(s) 238, 759, 1785, 1902
Bse3DI GCAATG 2 cut(s) 1413, 1770
Bse8I GATNNNNATC 2 cut(s) 722, 1293
BseBI CCWGG 4 cut(s) 274, 443, 681, 1160
BseDI CCNNGG 2 cut(s) 442, 1580
BseGI GGATG 3 cut(s) 36, 1073, 1891
BseJI GATNNNNATC 2 cut(s) 722, 1293
BseLI CCNNNNNNNGG 7 cut(s) 107, 273, 626, 686, 1231, 1586, 1908
BseMI GCAATG 2 cut(s) 1413, 1770
BseMII CTCAG 2 cut(s) 194, 300
BseNI ACTGG 4 cut(s) 238, 759, 1785, 1902
BseRI GAGGAG 3 cut(s) 642, 750, 1495
BseSI GKGCMC 1 cut(s) 1537
BseXI GCAGC 2 cut(s) 499, 705
BseYI CCCAGC 2 cut(s) 596, 675
BsgI GTGCAG 1 cut(s) 732
BshFI GGCC 5 cut(s) 186, 936, 1177, 1328, 1669
BshNI GGYRCC 1 cut(s) 1393
BsiHKAI GWGCWC 1 cut(s) 1138
BsiSI CCGG 3 cut(s) 9, 182, 1366
BslFI GGGAC 1 cut(s) 619
BslI CCNNNNNNNGG 7 cut(s) 107, 273, 626, 686, 1231, 1586, 1908
BsmAI GTCTC 4 cut(s) 371, 624, 1254, 1816
BsmFI GGGAC 1 cut(s) 619
BsmI GAATGC 1 cut(s) 328
BsnI GGCC 5 cut(s) 186, 936, 1177, 1328, 1669
Bsp119I TTCGAA 1 cut(s) 1791
Bsp1286I GDGCHC 2 cut(s) 1138, 1537
Bsp1407I TGTACA 1 cut(s) 315
Bsp143I GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
BspACI CCGC 4 cut(s) 696, 954, 1411, 1498
BspANI GGCC 5 cut(s) 186, 936, 1177, 1328, 1669
BspCNI CTCAG 2 cut(s) 195, 301
BspHI TCATGA 1 cut(s) 1873
BspLI GGNNCC 2 cut(s) 1395, 1578
BspMAI CTGCAG 1 cut(s) 517
BspMI ACCTGC 3 cut(s) 506, 698, 840
BspPI GGATC 5 cut(s) 574, 1199, 1571, 1584, 1727
BspQI GCTCTTC 1 cut(s) 136
BspT104I TTCGAA 1 cut(s) 1791
BspT107I GGYRCC 1 cut(s) 1393
BsrBI CCGCTC 1 cut(s) 1500
BsrDI GCAATG 2 cut(s) 1413, 1770
BsrGI TGTACA 1 cut(s) 315
BsrI ACTGG 4 cut(s) 238, 759, 1785, 1902
BssECI CCNNGG 2 cut(s) 442, 1580
BssMI GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
BssSI CACGAG 2 cut(s) 102, 1131
BssT1I CCWWGG 1 cut(s) 1580
Bst2BI CACGAG 2 cut(s) 102, 1131
Bst2UI CCWGG 4 cut(s) 274, 443, 681, 1160
Bst4CI ACNGT 3 cut(s) 16, 388, 1596
Bst6I CTCTTC 1 cut(s) 136
BstAPI GCANNNNNTGC 1 cut(s) 512
BstAUI TGTACA 1 cut(s) 315
BstBI TTCGAA 1 cut(s) 1791
BstC8I GCNNGC 3 cut(s) 127, 328, 1156
BstDEI CTNAG 2 cut(s) 203, 309
BstEII GGTNACC 1 cut(s) 1805
BstENI CCTNNNNNAGG 2 cut(s) 624, 1229
BstF5I GGATG 3 cut(s) 36, 1073, 1891
BstKTI GATC 8 cut(s) 52, 582, 1194, 1251, 1579, 1728, 1735, 1879
BstMAI GTCTC 4 cut(s) 371, 624, 1254, 1816
BstMBI GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
BstMWI GCNNNNNNNGC 3 cut(s) 234, 512, 1183
BstNI CCWGG 4 cut(s) 274, 443, 681, 1160
BstPAI GACNNNNGTC 1 cut(s) 636
BstPI GGTNACC 1 cut(s) 1805
BstSCI CCNGG 6 cut(s) 181, 272, 441, 679, 1158, 1364
BstSFI CTRYAG 2 cut(s) 513, 660
BstSLI GKGCMC 1 cut(s) 1537
BstV1I GCAGC 2 cut(s) 499, 705
BstV2I GAAGAC 4 cut(s) 454, 733, 1647, 1671
BstX2I RGATCY 3 cut(s) 579, 1191, 1576
BstXI CCANNNNNNTGG 1 cut(s) 27
BstYI RGATCY 3 cut(s) 579, 1191, 1576
BsuRI GGCC 5 cut(s) 186, 936, 1177, 1328, 1669
BtrI CACGTC 1 cut(s) 452
BtsCI GGATG 3 cut(s) 36, 1073, 1891
BtsI GCAGTG 2 cut(s) 549, 720
BtsIMutI CAGTG 4 cut(s) 549, 720, 1480, 1689
BveI ACCTGC 3 cut(s) 506, 698, 840
Cac8I GCNNGC 3 cut(s) 127, 328, 1156
CaiI CAGNNNCTG 2 cut(s) 512, 1194
CciI TCATGA 1 cut(s) 1873
Cfr13I GGNCC 8 cut(s) 184, 638, 791, 829, 920, 934, 1145, 1567
Csp6I GTAC 4 cut(s) 316, 352, 570, 1108
CspCI CAANNNNNGTGG 2 cut(s) 1611, 1646
CviAII CATG 7 cut(s) 159, 319, 1024, 1229, 1649, 1675, 1874
CviQI GTAC 4 cut(s) 316, 352, 570, 1108
DdeI CTNAG 2 cut(s) 203, 309
DpnI GATC 8 cut(s) 51, 581, 1193, 1250, 1578, 1727, 1734, 1878
DpnII GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
EaeI YGGCCR 2 cut(s) 1175, 1326
Eam1104I CTCTTC 1 cut(s) 136
EarI CTCTTC 1 cut(s) 136
Eco130I CCWWGG 1 cut(s) 1580
Eco147I AGGCCT 1 cut(s) 1669
Eco47I GGWCC 6 cut(s) 638, 791, 829, 920, 1145, 1567
Eco57I CTGAAG 2 cut(s) 117, 1665
Eco91I GGTNACC 1 cut(s) 1805
EcoNI CCTNNNNNAGG 2 cut(s) 624, 1229
EcoO109I RGGNCCY 1 cut(s) 934
EcoO65I GGTNACC 1 cut(s) 1805
EcoRI GAATTC 1 cut(s) 765
EcoRII CCWGG 4 cut(s) 272, 441, 679, 1158
EcoT14I CCWWGG 1 cut(s) 1580
ErhI CCWWGG 1 cut(s) 1580
FaeI CATG 7 cut(s) 162, 322, 1027, 1232, 1652, 1678, 1877
FaqI GGGAC 1 cut(s) 619
FatI CATG 7 cut(s) 158, 318, 1023, 1228, 1648, 1674, 1873
FauI CCCGC 1 cut(s) 1404
Fnu4HI GCNGC 2 cut(s) 513, 694
FokI GGATG 3 cut(s) 43, 1080, 1878
Fsp4HI GCNGC 2 cut(s) 513, 694
FspBI CTAG 4 cut(s) 482, 1382, 1571, 1586
GluI GCNGC 2 cut(s) 513, 694
GsaI CCCAGC 2 cut(s) 600, 679
GsuI CTGGAG 1 cut(s) 753
HaeIII GGCC 5 cut(s) 186, 936, 1177, 1328, 1669
HapII CCGG 3 cut(s) 9, 182, 1366
Hin1II CATG 7 cut(s) 162, 322, 1027, 1232, 1652, 1678, 1877
HindIII AAGCTT 3 cut(s) 971, 1058, 1331
HinfI GANTC 9 cut(s) 291, 304, 665, 723, 738, 997, 1235, 1816, 1898
HpaII CCGG 3 cut(s) 9, 182, 1366
HphI GGTGA 5 cut(s) 61, 1174, 1699, 1735, 1817
Hpy166II GTNNAC 7 cut(s) 98, 164, 391, 549, 829, 928, 1851
Hpy188I TCNGA 7 cut(s) 670, 946, 1422, 1451, 1504, 1732, 1821
Hpy188III TCNNGA 7 cut(s) 288, 308, 1001, 1526, 1718, 1874, 1895
Hpy8I GTNNAC 7 cut(s) 98, 164, 391, 549, 829, 928, 1851
HpyAV CCTTC 7 cut(s) 197, 814, 902, 947, 1073, 1680, 1694
HpyCH4III ACNGT 3 cut(s) 16, 388, 1596
HpyCH4IV ACGT 3 cut(s) 350, 451, 558
HpyF10VI GCNNNNNNNGC 3 cut(s) 234, 512, 1183
HpyF3I CTNAG 2 cut(s) 203, 309
HpySE526I ACGT 3 cut(s) 350, 451, 558
Hsp92II CATG 7 cut(s) 162, 322, 1027, 1232, 1652, 1678, 1877
Kzo9I GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
LguI GCTCTTC 1 cut(s) 136
LmnI GCTCC 1 cut(s) 1505
Lsp1109I GCAGC 2 cut(s) 499, 705
LweI GCATC 2 cut(s) 230, 499
MaeI CTAG 4 cut(s) 482, 1382, 1571, 1586
MaeII ACGT 3 cut(s) 350, 451, 558
MaeIII GTNAC 5 cut(s) 477, 535, 559, 1484, 1805
MalI GATC 8 cut(s) 51, 581, 1193, 1250, 1578, 1727, 1734, 1878
MbiI CCGCTC 1 cut(s) 1500
MboI GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
MfeI CAATTG 2 cut(s) 957, 1836
MflI RGATCY 3 cut(s) 579, 1191, 1576
MhlI GDGCHC 2 cut(s) 1138, 1537
MlsI TGGCCA 2 cut(s) 1177, 1328
MluCI AATT 9 cut(s) 65, 91, 214, 280, 765, 957, 1004, 1452, 1836
MluNI TGGCCA 2 cut(s) 1177, 1328
MlyI GAGTC 3 cut(s) 285, 747, 1825
MmeI TCCRAC 2 cut(s) 1443, 1545
Mox20I TGGCCA 2 cut(s) 1177, 1328
MroXI GAANNNNTTC 1 cut(s) 782
MscI TGGCCA 2 cut(s) 1177, 1328
MseI TTAA 3 cut(s) 966, 1266, 1599
Msp20I TGGCCA 2 cut(s) 1177, 1328
MspA1I CMGCKG 1 cut(s) 696
MspI CCGG 3 cut(s) 9, 182, 1366
MspR9I CCNGG 6 cut(s) 183, 274, 443, 681, 1160, 1366
MunI CAATTG 2 cut(s) 957, 1836
Mva1269I GAATGC 1 cut(s) 328
MvaI CCWGG 4 cut(s) 274, 443, 681, 1160
MwoI GCNNNNNNNGC 3 cut(s) 234, 512, 1183
NciI CCSGG 2 cut(s) 183, 1366
NdeII GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
NlaIII CATG 7 cut(s) 162, 322, 1027, 1232, 1652, 1678, 1877
NlaIV GGNNCC 2 cut(s) 1395, 1578
NmuCI GTSAC 3 cut(s) 477, 535, 1805
NspV TTCGAA 1 cut(s) 1791
PagI TCATGA 1 cut(s) 1873
PaqCI CACCTGC 2 cut(s) 506, 698
PceI AGGCCT 1 cut(s) 1669
PciSI GCTCTTC 1 cut(s) 136
PctI GAATGC 1 cut(s) 328
PdmI GAANNNNTTC 1 cut(s) 782
PfeI GAWTC 6 cut(s) 304, 665, 723, 997, 1235, 1898
PflMI CCANNNNNTGG 3 cut(s) 107, 686, 1908
PkrI GCNGC 2 cut(s) 514, 695
PleI GAGTC 3 cut(s) 285, 746, 1824
PpsI GAGTC 3 cut(s) 285, 746, 1824
PshAI GACNNNNGTC 1 cut(s) 636
Psp6I CCWGG 4 cut(s) 272, 441, 679, 1158
PspEI GGTNACC 1 cut(s) 1805
PspFI CCCAGC 2 cut(s) 596, 675
PspGI CCWGG 4 cut(s) 272, 441, 679, 1158
PspN4I GGNNCC 2 cut(s) 1395, 1578
PspPI GGNCC 8 cut(s) 184, 638, 791, 829, 920, 934, 1145, 1567
PstI CTGCAG 1 cut(s) 517
PstNI CAGNNNCTG 2 cut(s) 512, 1194
PsuI RGATCY 3 cut(s) 579, 1191, 1576
RsaI GTAC 4 cut(s) 317, 353, 571, 1109
RsaNI GTAC 4 cut(s) 316, 352, 570, 1108
SapI GCTCTTC 1 cut(s) 136
SaqAI TTAA 3 cut(s) 966, 1266, 1599
SatI GCNGC 2 cut(s) 513, 694
Sau3AI GATC 8 cut(s) 49, 579, 1191, 1248, 1576, 1725, 1732, 1876
Sau96I GGNCC 8 cut(s) 184, 638, 791, 829, 920, 934, 1145, 1567
ScaI AGTACT 1 cut(s) 1109
SchI GAGTC 3 cut(s) 285, 747, 1825
ScrFI CCNGG 6 cut(s) 183, 274, 443, 681, 1160, 1366
SduI GDGCHC 2 cut(s) 1138, 1537
SfaNI GCATC 2 cut(s) 230, 499
SfcI CTRYAG 2 cut(s) 513, 660
SfuI TTCGAA 1 cut(s) 1791
SinI GGWCC 6 cut(s) 638, 791, 829, 920, 1145, 1567
SmlI CTYRAG 2 cut(s) 853, 1811
SmoI CTYRAG 2 cut(s) 853, 1811
Sse9I AATT 9 cut(s) 65, 91, 214, 280, 765, 957, 1004, 1452, 1836
SseBI AGGCCT 1 cut(s) 1669
SsiI CCGC 4 cut(s) 696, 954, 1411, 1498
SspI AATATT 2 cut(s) 414, 502
SspMI CTAG 4 cut(s) 482, 1382, 1571, 1586
StuI AGGCCT 1 cut(s) 1669
StyD4I CCNGG 6 cut(s) 181, 272, 441, 679, 1158, 1364
StyI CCWWGG 1 cut(s) 1580
TaaI ACNGT 3 cut(s) 16, 388, 1596
TaiI ACGT 3 cut(s) 353, 454, 561
TaqI TCGA 3 cut(s) 459, 1287, 1791
TasI AATT 9 cut(s) 65, 91, 214, 280, 765, 957, 1004, 1452, 1836
TatI WGTACW 2 cut(s) 315, 1107
TfiI GAWTC 6 cut(s) 304, 665, 723, 997, 1235, 1898
Tru1I TTAA 3 cut(s) 966, 1266, 1599
Tru9I TTAA 3 cut(s) 966, 1266, 1599
TscAI CASTG 4 cut(s) 556, 720, 1480, 1689
TseFI GTSAC 3 cut(s) 477, 535, 1805
TseI GCWGC 2 cut(s) 512, 693
Tsp45I GTSAC 3 cut(s) 477, 535, 1805
TspGWI ACGGA 2 cut(s) 572, 1876
TspRI CASTG 4 cut(s) 556, 720, 1480, 1689
Van91I CCANNNNNTGG 3 cut(s) 107, 686, 1908
VpaK11BI GGWCC 6 cut(s) 638, 791, 829, 920, 1145, 1567
XagI CCTNNNNNAGG 2 cut(s) 624, 1229
XapI RAATTY 3 cut(s) 65, 765, 1004
XcmI CCANNNNNNNNNTGG 2 cut(s) 683, 1681
XmnI GAANNNNTTC 1 cut(s) 782
XspI CTAG 4 cut(s) 482, 1382, 1571, 1586
ZrmI AGTACT 1 cut(s) 1109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.