pycom03g19540

leucine-rich repeat receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
20137113 .. 20140935
3823 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g19540.3

Sequence Viewer

Length: 1317 bp
ATGATTGACGCATCCTTAACTGGAAACTTGTTGACTGGACCCGTGCCTACTTGGCCGAAAAACATCGTTGATCTTTCATTTAACAACCTCACCATAGGGAACACAAGTTGTCAATCAAGGGGCTTGAACTTGTTTGACAGCAATAGTTCAGGAGTTTCATGTTCCACAGCTGCAAAATGTCCAAAAACTATGTACTCCTCCTTTCATATTAATTGTGGTGGTAAAGAAGTAACCATTGAAAATAAAAGATATGAGGATGACACATTTTCAACTGGACCTTCATCATTTTACCAGAGCAGAACAAACTGGGCATTAAGCAGCACCGGTTACTTCCCTGATGATAGCCGTATTACAGACACCTTTATATGGACTAATGAAACTAGACTCTCTATGGCCGATCCCCAACTATACACCGTAAAACTCCATTTTGCAGAGTTAATGTTTAGAAACGGATACACATATGAAAGCCTGGGAAGGCGAGTATTTGATATTTACATTCAGGATATGCCAGTACTGCAGAATTTCAATATTATGGATGACGCTAGTGTGTTTGGTAATGTAGTCATACGAAATTTTACCGCGAATGTAACTAATCATACCTTGAAGATCCATTTCAATTGGGCTGGCAAAGGGACGACAGGCATCCCTGTTAGAGGAGTCTATGGTCCTCTTATATCAGCTATTTCGGTGGAACCTGCAGTCGACAATAGCTCAACAAAAAATGGAAATAGCATATCACCTGGTGTAAATGGCGTATCTGTAGGTGCAGTGGTTGGAATTGTGGCCGGAGGAATCTTTATTATATTAGTGATACTTAGTATTCTTTGGAGGAGAGGCTCCCTAGGACAACAAAAGACATTGGAGGATGATTTAAAGGGTGTGGACCTGCAAACTGGTAAGTTTACATTCAAGCAACTCAAAGCTGCCACAACCAACTTTGACAAAGCAAATAAGATTGGCGAAGGTGGTTTTGGTTCCGTTTATAAGGGTATTCTAGCAGATGGCACCATGATTGCTGTTAAGCAGCTTTCTTCCAAATCAAAGCAAGGGAATCGTGAATTTGTGAATGAGATAGGGGCAGGAGAAAGTCATTTGAAGTTGGATTGGCCAACAAGGCACAAGATCTGCATTGGTATAGCGAGAGGTCTGGCTCACCTCCATGAGGAATCAAGATTGAAGGTCGTTCATAGAGACATAAAGGCAACTAATGTGTTGCTTGATAAAAATCTAAACCCAAAAATATCTGACTTTGGATTAGCCAAACTTGATGAAGAAGATAATACACACATTAGCACTCGTATTGCTGGAACTTTGTAA

Protein Analysis

439

Amino Acids

47.87

Weight (kDa)

8.64

Isoelectric Point (pI)

28.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000292)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53420 AT3G14840
fragaria_vesca FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17840 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17841 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17850 FvH4_3g17851
malus_domestica MD03G1246600.v1.1 MD06G1045200.v1.1 MD06G1045400.v1.1 MD11G1267800.v1.1 MD11G1267900.v1.1 MD11G1268100.v1.1 MD11G1268300.v1.1 MD11G1268500.v1.1 MD11G1268600.v1.1
prunus_persica Prupe.4G157700_v2.0.a1 Prupe.4G157700_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157800_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1 Prupe.4G157900_v2.0.a1
pyrus_communis pycom03g19540 pycom11g23600 pycom11g23630 pycom11g23690 pycom11g23720 pycom11g23730 pycom11g23740 pycom11g23750
rosa_chinensis RchiOBHm_Chr0c40g0503411 RchiOBHm_Chr0c40g0503421 RchiOBHm_Chr5g0029631 RchiOBHm_Chr5g0029661 RchiOBHm_Chr5g0029701 RchiOBHm_Chr5g0029741 RchiOBHm_Chr5g0029771 RchiOBHm_Chr5g0029781 RchiOBHm_Chr5g0029811 RchiOBHm_Chr5g0029851 RchiOBHm_Chr5g0029871 RchiOBHm_Chr5g0029891 RchiOBHm_Chr7g0222221
rosa_laevigata RLG00000017380 RLG00000032873 RLG00000033188 RLG00000033190 RLG00000033192 RLG00000033193 RLG00000033194 RLG00000033196 RLG00000033199 RLG00000033238
rosa_multiflora Rmu_co8359987.1_g000001 Rmu_co8444909.1_g000001 Rmu_sc0001608.1_g000007 Rmu_sc0001608.1_g000009 Rmu_sc0001608.1_g000013 Rmu_sc0001608.1_g000018 Rmu_sc0001608.1_g000023 Rmu_sc0001608.1_g000040 Rmu_sc0003238.1_g000016 Rmu_sc0003368.1_g000026 Rmu_sc0003368.1_g000034 Rmu_sc0003368.1_g000043 Rmu_sc0003368.1_g000047 Rmu_sc0003368.1_g000052 Rmu_sc0003368.1_g000054 Rmu_sc0004963.1_g000001
rosa_roxburghii Rroxscaffold_1G00050080 Rroxscaffold_1G00050090 Rroxscaffold_1G00050110 Rroxscaffold_1G00050120 Rroxscaffold_1G00050180 Rroxscaffold_1G00050190 Rroxscaffold_1G00050220 Rroxscaffold_1G00050270 Rroxscaffold_1G00050300
rosa_rugosa Rorug04G0065200 Rorug05G0114900 Rorug05G0115000 Rorug05G0115100 Rorug05G0120100 Rorug05G0238900
rosa_samantha Rh5AG207800 Rh5AG208000 Rh5AG208300 Rh5AG208400 Rh5AG208800 Rh5AG294900 Rh5AG295000 Rh5AG295400 Rh5CG230400 Rh7AG347800
rosa_wichuraiana Rw0G005370 Rw0G012460 Rw0G019060 Rw5G018910 Rw5G018920 Rw5G018930 Rw5G018940 Rw5G018960 Rw5G018970 Rw5G018980 Rw5G018990 Rw5G019000 Rw7G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 984
Acc36I ACCTGC 2 cut(s) 703, 894
AccB1I GGYRCC 1 cut(s) 1004
AccI GTMKAC 1 cut(s) 702
AccII CGCG 1 cut(s) 581
AciI CCGC 1 cut(s) 579
AclWI GGATC 2 cut(s) 392, 601
AcoI YGGCCR 4 cut(s) 53, 393, 783, 1106
AcsI RAATTY 3 cut(s) 520, 571, 1058
AdeI CACNNNGTG 1 cut(s) 743
AfaI GTAC 2 cut(s) 194, 513
AfiI CCNNNNNNNGG 3 cut(s) 366, 653, 1162
AgeI ACCGGT 1 cut(s) 323
AgsI TTSAA 9 cut(s) 127, 239, 270, 526, 604, 616, 910, 1096, 1177
AjnI CCWGG 2 cut(s) 468, 739
AjuI GAANNNNNNNTTGG 2 cut(s) 954, 986
AluBI AGCT 5 cut(s) 170, 680, 711, 923, 1027
AluI AGCT 5 cut(s) 170, 680, 711, 923, 1027
Alw26I GTCTC 1 cut(s) 1185
AlwI GGATC 2 cut(s) 392, 601
AoxI GGCC 4 cut(s) 53, 393, 783, 1106
ApeKI GCWGC 4 cut(s) 170, 318, 923, 1024
ApoI RAATTY 3 cut(s) 520, 571, 1058
AseI ATTAAT 1 cut(s) 210
AsiGI ACCGGT 1 cut(s) 323
AspA2I CCTAGG 1 cut(s) 841
AspS9I GGNCC 4 cut(s) 38, 275, 665, 883
AsuHPI GGTGA 3 cut(s) 82, 729, 1145
AvaII GGWCC 4 cut(s) 38, 275, 665, 883
AvrII CCTAGG 1 cut(s) 841
BalI TGGCCA 1 cut(s) 1108
BanI GGYRCC 1 cut(s) 1004
BbvI GCAGC 4 cut(s) 157, 330, 910, 1036
BccI CCATC 1 cut(s) 995
BceAI ACGGC 1 cut(s) 330
BcgI CGANNNNNNTGC 2 cut(s) 1034, 1068
BciT130I CCWGG 2 cut(s) 470, 741
BciVI GTATCC 1 cut(s) 446
BcoDI GTCTC 1 cut(s) 1185
BfaI CTAG 4 cut(s) 381, 543, 842, 995
BfmI CTRYAG 3 cut(s) 515, 696, 759
BfuAI ACCTGC 2 cut(s) 703, 894
BfuI GTATCC 1 cut(s) 446
BglI GCCNNNNNGGC 2 cut(s) 52, 1114
BglII AGATCT 1 cut(s) 1122
BisI GCNGC 4 cut(s) 171, 319, 924, 1025
BlnI CCTAGG 1 cut(s) 841
BlsI GCNGC 4 cut(s) 172, 320, 925, 1026
BmcAI AGTACT 1 cut(s) 513
Bme1390I CCNGG 2 cut(s) 470, 741
Bme18I GGWCC 4 cut(s) 38, 275, 665, 883
BmgT120I GGNCC 4 cut(s) 38, 275, 665, 883
BmiI GGNNCC 5 cut(s) 40, 693, 838, 976, 1006
BmrFI CCNGG 2 cut(s) 470, 741
BmrI ACTGGG 1 cut(s) 316
BmsI GCATC 2 cut(s) 20, 651
BmuI ACTGGG 1 cut(s) 316
BsaBI GATNNNNATC 1 cut(s) 1224
BsaJI CCNNGG 2 cut(s) 469, 841
BsaWI WCCGGW 1 cut(s) 323
Bsc4I CCNNNNNNNGG 3 cut(s) 366, 653, 1162
Bse118I RCCGGY 1 cut(s) 323
Bse1I ACTGG 6 cut(s) 25, 40, 277, 311, 509, 898
Bse8I GATNNNNATC 1 cut(s) 1224
BseBI CCWGG 2 cut(s) 470, 741
BseDI CCNNGG 2 cut(s) 469, 841
BseGI GGATG 5 cut(s) 11, 262, 541, 642, 871
BseJI GATNNNNATC 1 cut(s) 1224
BseLI CCNNNNNNNGG 3 cut(s) 366, 653, 1162
BseNI ACTGG 6 cut(s) 25, 40, 277, 311, 509, 898
BseRI GAGGAG 3 cut(s) 187, 669, 844
BseXI GCAGC 4 cut(s) 157, 330, 910, 1036
BsgI GTGCAG 1 cut(s) 786
Bsh1236I CGCG 1 cut(s) 581
BshFI GGCC 4 cut(s) 55, 395, 785, 1108
BshNI GGYRCC 1 cut(s) 1004
BshTI ACCGGT 1 cut(s) 323
BsiSI CCGG 2 cut(s) 324, 786
BslFI GGGAC 1 cut(s) 646
BslI CCNNNNNNNGG 3 cut(s) 366, 653, 1162
BsmAI GTCTC 1 cut(s) 1185
BsmFI GGGAC 1 cut(s) 646
BsnI GGCC 4 cut(s) 55, 395, 785, 1108
Bsp143I GATC 4 cut(s) 70, 397, 606, 1122
BspACI CCGC 1 cut(s) 579
BspANI GGCC 4 cut(s) 55, 395, 785, 1108
BspFNI CGCG 1 cut(s) 581
BspLI GGNNCC 5 cut(s) 40, 693, 838, 976, 1006
BspMAI CTGCAG 2 cut(s) 519, 700
BspMI ACCTGC 2 cut(s) 703, 894
BspPI GGATC 2 cut(s) 392, 601
BspT107I GGYRCC 1 cut(s) 1004
BsrFI RCCGGY 1 cut(s) 323
BsrI ACTGG 6 cut(s) 25, 40, 277, 311, 509, 898
BssAI RCCGGY 1 cut(s) 323
BssECI CCNNGG 2 cut(s) 469, 841
BssMI GATC 4 cut(s) 70, 397, 606, 1122
BssT1I CCWWGG 1 cut(s) 841
Bst2UI CCWGG 2 cut(s) 470, 741
Bst4CI ACNGT 1 cut(s) 415
BstC8I GCNNGC 1 cut(s) 625
BstDEI CTNAG 1 cut(s) 815
BstENI CCTNNNNNAGG 2 cut(s) 651, 1160
BstF5I GGATG 5 cut(s) 11, 262, 541, 642, 871
BstFNI CGCG 1 cut(s) 581
BstKTI GATC 4 cut(s) 73, 400, 609, 1125
BstMAI GTCTC 1 cut(s) 1185
BstMBI GATC 4 cut(s) 70, 397, 606, 1122
BstMWI GCNNNNNNNGC 3 cut(s) 52, 514, 1114
BstNI CCWGG 2 cut(s) 470, 741
BstSCI CCNGG 2 cut(s) 468, 739
BstSFI CTRYAG 3 cut(s) 515, 696, 759
BstUI CGCG 1 cut(s) 581
BstV1I GCAGC 4 cut(s) 157, 330, 910, 1036
BstX2I RGATCY 2 cut(s) 606, 1122
BstYI RGATCY 2 cut(s) 606, 1122
BsuI GTATCC 1 cut(s) 446
BsuRI GGCC 4 cut(s) 55, 395, 785, 1108
BtsCI GGATG 5 cut(s) 11, 262, 541, 642, 871
BtsI GCAGTG 1 cut(s) 774
BtsIMutI CAGTG 1 cut(s) 774
BveI ACCTGC 2 cut(s) 703, 894
Cac8I GCNNGC 1 cut(s) 625
Cfr10I RCCGGY 1 cut(s) 323
Cfr13I GGNCC 4 cut(s) 38, 275, 665, 883
CseI GACGC 2 cut(s) 17, 548
CsiI ACCWGGT 1 cut(s) 739
Csp6I GTAC 2 cut(s) 193, 512
CspAI ACCGGT 1 cut(s) 323
CviAII CATG 3 cut(s) 159, 1009, 1160
CviQI GTAC 2 cut(s) 193, 512
DdeI CTNAG 1 cut(s) 815
DpnI GATC 4 cut(s) 72, 399, 608, 1124
DpnII GATC 4 cut(s) 70, 397, 606, 1122
DraI TTTAAA 1 cut(s) 873
DraIII CACNNNGTG 1 cut(s) 743
EaeI YGGCCR 4 cut(s) 53, 393, 783, 1106
Eco130I CCWWGG 1 cut(s) 841
Eco47I GGWCC 4 cut(s) 38, 275, 665, 883
EcoNI CCTNNNNNAGG 2 cut(s) 651, 1160
EcoRII CCWGG 2 cut(s) 468, 739
EcoT14I CCWWGG 1 cut(s) 841
ErhI CCWWGG 1 cut(s) 841
FaeI CATG 3 cut(s) 162, 1012, 1163
FaqI GGGAC 1 cut(s) 646
FatI CATG 3 cut(s) 158, 1008, 1159
FauNDI CATATG 1 cut(s) 460
FblI GTMKAC 1 cut(s) 702
Fnu4HI GCNGC 4 cut(s) 171, 319, 924, 1025
FokI GGATG 4 cut(s) 269, 548, 629, 878
Fsp4HI GCNGC 4 cut(s) 171, 319, 924, 1025
FspBI CTAG 4 cut(s) 381, 543, 842, 995
GluI GCNGC 4 cut(s) 171, 319, 924, 1025
HaeIII GGCC 4 cut(s) 55, 395, 785, 1108
HapII CCGG 2 cut(s) 324, 786
HgaI GACGC 2 cut(s) 17, 548
Hin1II CATG 3 cut(s) 162, 1012, 1163
HincII GTYRAC 2 cut(s) 33, 703
HindII GTYRAC 2 cut(s) 33, 703
HinfI GANTC 5 cut(s) 384, 657, 792, 1051, 1166
HpaII CCGG 2 cut(s) 324, 786
HphI GGTGA 3 cut(s) 82, 729, 1145
Hpy166II GTNNAC 4 cut(s) 33, 703, 883, 903
Hpy188I TCNGA 1 cut(s) 1246
Hpy188III TCNNGA 4 cut(s) 150, 500, 1055, 1170
Hpy8I GTNNAC 4 cut(s) 33, 703, 883, 903
HpyAV CCTTC 4 cut(s) 288, 468, 956, 1171
HpyCH4III ACNGT 1 cut(s) 415
HpyCH4V TGCA 7 cut(s) 173, 431, 517, 698, 767, 889, 1128
HpyF10VI GCNNNNNNNGC 3 cut(s) 52, 514, 1114
HpyF3I CTNAG 1 cut(s) 815
Hsp92II CATG 3 cut(s) 162, 1012, 1163
Kzo9I GATC 4 cut(s) 70, 397, 606, 1122
LmnI GCTCC 1 cut(s) 842
Lsp1109I GCAGC 4 cut(s) 157, 330, 910, 1036
LweI GCATC 2 cut(s) 20, 651
MabI ACCWGGT 1 cut(s) 739
MaeI CTAG 4 cut(s) 381, 543, 842, 995
MaeIII GTNAC 3 cut(s) 229, 326, 586
MalI GATC 4 cut(s) 72, 399, 608, 1124
MboI GATC 4 cut(s) 70, 397, 606, 1122
MboII GAAGA 4 cut(s) 616, 1023, 1283, 1286
MfeI CAATTG 1 cut(s) 616
MflI RGATCY 2 cut(s) 606, 1122
MlsI TGGCCA 1 cut(s) 1108
MluCI AATT 6 cut(s) 211, 520, 571, 616, 777, 1058
MluNI TGGCCA 1 cut(s) 1108
MlyI GAGTC 2 cut(s) 378, 666
MmeI TCCRAC 2 cut(s) 754, 1080
Mox20I TGGCCA 1 cut(s) 1108
MscI TGGCCA 1 cut(s) 1108
MseI TTAA 7 cut(s) 17, 81, 210, 314, 437, 872, 1020
MslI CAYNNNNRTG 1 cut(s) 1158
Msp20I TGGCCA 1 cut(s) 1108
MspA1I CMGCKG 1 cut(s) 170
MspI CCGG 2 cut(s) 324, 786
MspR9I CCNGG 2 cut(s) 470, 741
MunI CAATTG 1 cut(s) 616
MvaI CCWGG 2 cut(s) 470, 741
MvnI CGCG 1 cut(s) 581
MwoI GCNNNNNNNGC 3 cut(s) 52, 514, 1114
NdeI CATATG 1 cut(s) 460
NdeII GATC 4 cut(s) 70, 397, 606, 1122
NlaIII CATG 3 cut(s) 162, 1012, 1163
NlaIV GGNNCC 5 cut(s) 40, 693, 838, 976, 1006
PfeI GAWTC 3 cut(s) 792, 1051, 1166
PinAI ACCGGT 1 cut(s) 323
PkrI GCNGC 4 cut(s) 172, 320, 925, 1026
PleI GAGTC 2 cut(s) 378, 665
PpsI GAGTC 2 cut(s) 378, 665
PshBI ATTAAT 1 cut(s) 210
PsiI TTATAA 1 cut(s) 984
Psp6I CCWGG 2 cut(s) 468, 739
PspGI CCWGG 2 cut(s) 468, 739
PspN4I GGNNCC 5 cut(s) 40, 693, 838, 976, 1006
PspPI GGNCC 4 cut(s) 38, 275, 665, 883
PstI CTGCAG 2 cut(s) 519, 700
PsuI RGATCY 2 cut(s) 606, 1122
PvuII CAGCTG 1 cut(s) 170
RsaI GTAC 2 cut(s) 194, 513
RsaNI GTAC 2 cut(s) 193, 512
RseI CAYNNNNRTG 1 cut(s) 1158
SalI GTCGAC 1 cut(s) 701
SaqAI TTAA 7 cut(s) 17, 81, 210, 314, 437, 872, 1020
SatI GCNGC 4 cut(s) 171, 319, 924, 1025
Sau3AI GATC 4 cut(s) 70, 397, 606, 1122
Sau96I GGNCC 4 cut(s) 38, 275, 665, 883
ScaI AGTACT 1 cut(s) 513
SchI GAGTC 2 cut(s) 378, 666
ScrFI CCNGG 2 cut(s) 470, 741
SexAI ACCWGGT 1 cut(s) 739
SfaNI GCATC 2 cut(s) 20, 651
SfcI CTRYAG 3 cut(s) 515, 696, 759
SinI GGWCC 4 cut(s) 38, 275, 665, 883
SmiMI CAYNNNNRTG 1 cut(s) 1158
Sse9I AATT 6 cut(s) 211, 520, 571, 616, 777, 1058
SsiI CCGC 1 cut(s) 579
SspI AATATT 1 cut(s) 529
SspMI CTAG 4 cut(s) 381, 543, 842, 995
StyD4I CCNGG 2 cut(s) 468, 739
StyI CCWWGG 1 cut(s) 841
TaaI ACNGT 1 cut(s) 415
TaqI TCGA 1 cut(s) 702
TasI AATT 6 cut(s) 211, 520, 571, 616, 777, 1058
TatI WGTACW 2 cut(s) 192, 511
TfiI GAWTC 3 cut(s) 792, 1051, 1166
Tru1I TTAA 7 cut(s) 17, 81, 210, 314, 437, 872, 1020
Tru9I TTAA 7 cut(s) 17, 81, 210, 314, 437, 872, 1020
TscAI CASTG 1 cut(s) 774
TseI GCWGC 4 cut(s) 170, 318, 923, 1024
TspDTI ATGAA 8 cut(s) 66, 147, 194, 270, 390, 477, 1175, 1284
TspGWI ACGGA 2 cut(s) 465, 967
TspRI CASTG 1 cut(s) 774
VpaK11BI GGWCC 4 cut(s) 38, 275, 665, 883
VspI ATTAAT 1 cut(s) 210
XagI CCTNNNNNAGG 2 cut(s) 651, 1160
XapI RAATTY 3 cut(s) 520, 571, 1058
XmaJI CCTAGG 1 cut(s) 841
XmiI GTMKAC 1 cut(s) 702
XspI CTAG 4 cut(s) 381, 543, 842, 995
ZrmI AGTACT 1 cut(s) 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.