Mitogen-activated protein kinase kinase kinase 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 489, 521 |
| AccB1I | GGYRCC | 1 cut(s) | 1207 |
| AccBSI | CCGCTC | 2 cut(s) | 261, 285 |
| AccII | CGCG | 2 cut(s) | 53, 153 |
| AclWI | GGATC | 2 cut(s) | 976, 1129 |
| AcoI | YGGCCR | 1 cut(s) | 222 |
| AcsI | RAATTY | 1 cut(s) | 173 |
| AcyI | GRCGYC | 5 cut(s) | 75, 312, 486, 518, 1208 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 345 |
| AgsI | TTSAA | 7 cut(s) | 167, 424, 905, 990, 1411, 1462, 1477 |
| AjnI | CCWGG | 3 cut(s) | 239, 343, 828 |
| AluBI | AGCT | 5 cut(s) | 147, 937, 955, 1151, 1253 |
| AluI | AGCT | 5 cut(s) | 147, 937, 955, 1151, 1253 |
| Alw26I | GTCTC | 6 cut(s) | 28, 200, 606, 923, 986, 1021 |
| AlwI | GGATC | 2 cut(s) | 976, 1129 |
| AoxI | GGCC | 7 cut(s) | 199, 208, 222, 246, 404, 1439, 1481 |
| ApeKI | GCWGC | 4 cut(s) | 8, 350, 1250, 1448 |
| ApoI | RAATTY | 1 cut(s) | 173 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 428 |
| AspA2I | CCTAGG | 1 cut(s) | 326 |
| AspLEI | GCGC | 3 cut(s) | 55, 255, 1210 |
| AspS9I | GGNCC | 3 cut(s) | 209, 247, 405 |
| AsuHPI | GGTGA | 5 cut(s) | 268, 481, 494, 669, 719 |
| AsuII | TTCGAA | 1 cut(s) | 885 |
| AvrII | CCTAGG | 1 cut(s) | 326 |
| BalI | TGGCCA | 1 cut(s) | 224 |
| BanI | GGYRCC | 1 cut(s) | 1207 |
| BanII | GRGCYC | 1 cut(s) | 829 |
| BbsI | GAAGAC | 3 cut(s) | 222, 702, 836 |
| BbvI | GCAGC | 3 cut(s) | 337, 1262, 1460 |
| BccI | CCATC | 3 cut(s) | 233, 773, 1198 |
| BceAI | ACGGC | 2 cut(s) | 299, 1262 |
| BciT130I | CCWGG | 3 cut(s) | 241, 345, 830 |
| BclI | TGATCA | 1 cut(s) | 817 |
| BcoDI | GTCTC | 6 cut(s) | 28, 200, 606, 923, 986, 1021 |
| BfaI | CTAG | 1 cut(s) | 327 |
| BfmI | CTRYAG | 2 cut(s) | 1365, 1446 |
| BfoI | RGCGCY | 2 cut(s) | 256, 1211 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 207, 245 |
| BlnI | CCTAGG | 1 cut(s) | 326 |
| Bme1390I | CCNGG | 3 cut(s) | 241, 345, 830 |
| BmgT120I | GGNCC | 3 cut(s) | 209, 247, 405 |
| BmiI | GGNNCC | 7 cut(s) | 211, 407, 510, 657, 745, 826, 1209 |
| BmrFI | CCNGG | 3 cut(s) | 241, 345, 830 |
| BmsI | GCATC | 4 cut(s) | 1102, 1317, 1381, 1514 |
| BpiI | GAAGAC | 3 cut(s) | 222, 702, 836 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1152 |
| Bpu14I | TTCGAA | 1 cut(s) | 885 |
| BpuEI | CTTGAG | 3 cut(s) | 41, 875, 971 |
| BsaHI | GRCGYC | 5 cut(s) | 75, 312, 486, 518, 1208 |
| BsaJI | CCNNGG | 5 cut(s) | 240, 326, 344, 828, 829 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 263, 293 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 345 |
| Bse118I | RCCGGY | 3 cut(s) | 362, 479, 1437 |
| Bse3DI | GCAATG | 2 cut(s) | 574, 639 |
| BseBI | CCWGG | 3 cut(s) | 241, 345, 830 |
| BseDI | CCNNGG | 5 cut(s) | 240, 326, 344, 828, 829 |
| BseGI | GGATG | 6 cut(s) | 225, 505, 1117, 1209, 1277, 1332 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 345 |
| BseMI | GCAATG | 2 cut(s) | 574, 639 |
| BseMII | CTCAG | 1 cut(s) | 570 |
| BseXI | GCAGC | 3 cut(s) | 337, 1262, 1460 |
| BseYI | CCCAGC | 1 cut(s) | 249 |
| Bsh1236I | CGCG | 2 cut(s) | 53, 153 |
| Bsh1285I | CGRYCG | 2 cut(s) | 43, 339 |
| BshFI | GGCC | 7 cut(s) | 201, 210, 224, 248, 406, 1441, 1483 |
| BshNI | GGYRCC | 1 cut(s) | 1207 |
| BsiEI | CGRYCG | 2 cut(s) | 43, 339 |
| BsiSI | CCGG | 6 cut(s) | 46, 207, 363, 480, 694, 1438 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 345 |
| BsmAI | GTCTC | 6 cut(s) | 28, 200, 606, 923, 986, 1021 |
| BsnI | GGCC | 7 cut(s) | 201, 210, 224, 248, 406, 1441, 1483 |
| Bsp119I | TTCGAA | 1 cut(s) | 885 |
| Bsp1286I | GDGCHC | 1 cut(s) | 829 |
| Bsp143I | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| BspANI | GGCC | 7 cut(s) | 201, 210, 224, 248, 406, 1441, 1483 |
| BspCNI | CTCAG | 1 cut(s) | 571 |
| BspFNI | CGCG | 2 cut(s) | 53, 153 |
| BspLI | GGNNCC | 7 cut(s) | 211, 407, 510, 657, 745, 826, 1209 |
| BspMAI | CTGCAG | 1 cut(s) | 1450 |
| BspPI | GGATC | 2 cut(s) | 976, 1129 |
| BspT104I | TTCGAA | 1 cut(s) | 885 |
| BspT107I | GGYRCC | 1 cut(s) | 1207 |
| BsrBI | CCGCTC | 2 cut(s) | 261, 285 |
| BsrDI | GCAATG | 2 cut(s) | 574, 639 |
| BsrFI | RCCGGY | 3 cut(s) | 362, 479, 1437 |
| BssAI | RCCGGY | 3 cut(s) | 362, 479, 1437 |
| BssECI | CCNNGG | 5 cut(s) | 240, 326, 344, 828, 829 |
| BssMI | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| BssNI | GRCGYC | 5 cut(s) | 75, 312, 486, 518, 1208 |
| BssT1I | CCWWGG | 1 cut(s) | 326 |
| Bst2UI | CCWGG | 3 cut(s) | 241, 345, 830 |
| Bst4CI | ACNGT | 3 cut(s) | 620, 757, 1523 |
| Bst6I | CTCTTC | 1 cut(s) | 499 |
| BstACI | GRCGYC | 5 cut(s) | 75, 312, 486, 518, 1208 |
| BstBI | TTCGAA | 1 cut(s) | 885 |
| BstC8I | GCNNGC | 2 cut(s) | 1248, 1332 |
| BstDEI | CTNAG | 3 cut(s) | 579, 933, 1152 |
| BstEII | GGTNACC | 1 cut(s) | 725 |
| BstF5I | GGATG | 6 cut(s) | 225, 505, 1117, 1209, 1277, 1332 |
| BstFNI | CGCG | 2 cut(s) | 53, 153 |
| BstH2I | RGCGCY | 2 cut(s) | 256, 1211 |
| BstHHI | GCGC | 3 cut(s) | 55, 255, 1210 |
| BstKTI | GATC | 7 cut(s) | 43, 82, 820, 971, 1066, 1124, 1347 |
| BstMAI | GTCTC | 6 cut(s) | 28, 200, 606, 923, 986, 1021 |
| BstMBI | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| BstMCI | CGRYCG | 2 cut(s) | 43, 339 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 28, 159, 168, 198, 207, 245, 409 |
| BstNI | CCWGG | 3 cut(s) | 241, 345, 830 |
| BstPI | GGTNACC | 1 cut(s) | 725 |
| BstSCI | CCNGG | 3 cut(s) | 239, 343, 828 |
| BstSFI | CTRYAG | 2 cut(s) | 1365, 1446 |
| BstUI | CGCG | 2 cut(s) | 53, 153 |
| BstV1I | GCAGC | 3 cut(s) | 337, 1262, 1460 |
| BstV2I | GAAGAC | 3 cut(s) | 222, 702, 836 |
| BstX2I | RGATCY | 1 cut(s) | 1121 |
| BstYI | RGATCY | 1 cut(s) | 1121 |
| BsuRI | GGCC | 7 cut(s) | 201, 210, 224, 248, 406, 1441, 1483 |
| BtsCI | GGATG | 6 cut(s) | 225, 505, 1117, 1209, 1277, 1332 |
| BtsIMutI | CAGTG | 1 cut(s) | 625 |
| Cac8I | GCNNGC | 2 cut(s) | 1248, 1332 |
| CfoI | GCGC | 3 cut(s) | 55, 255, 1210 |
| Cfr10I | RCCGGY | 3 cut(s) | 362, 479, 1437 |
| Cfr13I | GGNCC | 3 cut(s) | 209, 247, 405 |
| CseI | GACGC | 5 cut(s) | 11, 14, 83, 142, 320 |
| CviAII | CATG | 3 cut(s) | 355, 890, 1061 |
| DdeI | CTNAG | 3 cut(s) | 579, 933, 1152 |
| DinI | GGCGCC | 1 cut(s) | 1209 |
| DpnI | GATC | 7 cut(s) | 42, 81, 819, 970, 1065, 1123, 1346 |
| DpnII | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| EaeI | YGGCCR | 1 cut(s) | 222 |
| Eam1104I | CTCTTC | 1 cut(s) | 499 |
| EarI | CTCTTC | 1 cut(s) | 499 |
| EciI | GGCGGA | 4 cut(s) | 384, 435, 466, 712 |
| Eco130I | CCWWGG | 1 cut(s) | 326 |
| Eco147I | AGGCCT | 1 cut(s) | 1483 |
| Eco24I | GRGCYC | 1 cut(s) | 829 |
| Eco32I | GATATC | 1 cut(s) | 1087 |
| Eco91I | GGTNACC | 1 cut(s) | 725 |
| EcoO65I | GGTNACC | 1 cut(s) | 725 |
| EcoRI | GAATTC | 1 cut(s) | 173 |
| EcoRII | CCWGG | 3 cut(s) | 239, 343, 828 |
| EcoRV | GATATC | 1 cut(s) | 1087 |
| EcoT14I | CCWWGG | 1 cut(s) | 326 |
| EcoT38I | GRGCYC | 1 cut(s) | 829 |
| EgeI | GGCGCC | 1 cut(s) | 1209 |
| EheI | GGCGCC | 1 cut(s) | 1209 |
| ErhI | CCWWGG | 1 cut(s) | 326 |
| FaeI | CATG | 3 cut(s) | 358, 893, 1064 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 957, 989 |
| FatI | CATG | 3 cut(s) | 354, 889, 1060 |
| FauI | CCCGC | 3 cut(s) | 266, 290, 417 |
| FauNDI | CATATG | 1 cut(s) | 1259 |
| FbaI | TGATCA | 1 cut(s) | 817 |
| FokI | GGATG | 6 cut(s) | 212, 512, 1124, 1216, 1284, 1339 |
| FriOI | GRGCYC | 1 cut(s) | 829 |
| FspBI | CTAG | 1 cut(s) | 327 |
| GlaI | GCGC | 3 cut(s) | 54, 254, 1209 |
| GsaI | CCCAGC | 1 cut(s) | 253 |
| HaeII | RGCGCY | 2 cut(s) | 256, 1211 |
| HaeIII | GGCC | 7 cut(s) | 201, 210, 224, 248, 406, 1441, 1483 |
| HapII | CCGG | 6 cut(s) | 46, 207, 363, 480, 694, 1438 |
| HgaI | GACGC | 5 cut(s) | 11, 14, 83, 142, 320 |
| HhaI | GCGC | 3 cut(s) | 55, 255, 1210 |
| Hin1I | GRCGYC | 5 cut(s) | 75, 312, 486, 518, 1208 |
| Hin1II | CATG | 3 cut(s) | 358, 893, 1064 |
| Hin6I | GCGC | 3 cut(s) | 53, 253, 1208 |
| HinP1I | GCGC | 3 cut(s) | 53, 253, 1208 |
| HincII | GTYRAC | 3 cut(s) | 1293, 1358, 1426 |
| HindII | GTYRAC | 3 cut(s) | 1293, 1358, 1426 |
| HinfI | GANTC | 9 cut(s) | 36, 581, 783, 841, 865, 1007, 1231, 1264, 1462 |
| HpaI | GTTAAC | 2 cut(s) | 1293, 1426 |
| HpaII | CCGG | 6 cut(s) | 46, 207, 363, 480, 694, 1438 |
| HphI | GGTGA | 5 cut(s) | 268, 481, 494, 669, 719 |
| Hpy166II | GTNNAC | 5 cut(s) | 1026, 1293, 1358, 1418, 1426 |
| Hpy188I | TCNGA | 6 cut(s) | 27, 158, 271, 499, 1344, 1349 |
| Hpy188III | TCNNGA | 7 cut(s) | 58, 421, 1373, 1386, 1459, 1474, 1533 |
| Hpy8I | GTNNAC | 5 cut(s) | 1026, 1293, 1358, 1418, 1426 |
| Hpy99I | CGWCG | 3 cut(s) | 77, 314, 610 |
| HpyAV | CCTTC | 4 cut(s) | 161, 758, 1221, 1316 |
| HpyCH4III | ACNGT | 3 cut(s) | 620, 757, 1523 |
| HpyCH4IV | ACGT | 2 cut(s) | 486, 518 |
| HpyCH4V | TGCA | 9 cut(s) | 977, 1115, 1136, 1185, 1250, 1330, 1394, 1448, 1505 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 28, 159, 168, 198, 207, 245, 409 |
| HpyF3I | CTNAG | 3 cut(s) | 579, 933, 1152 |
| HpySE526I | ACGT | 2 cut(s) | 486, 518 |
| Hsp92I | GRCGYC | 5 cut(s) | 75, 312, 486, 518, 1208 |
| Hsp92II | CATG | 3 cut(s) | 358, 893, 1064 |
| HspAI | GCGC | 3 cut(s) | 53, 253, 1208 |
| KasI | GGCGCC | 1 cut(s) | 1207 |
| Ksp22I | TGATCA | 1 cut(s) | 817 |
| KspAI | GTTAAC | 2 cut(s) | 1293, 1426 |
| Kzo9I | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| LmnI | GCTCC | 5 cut(s) | 113, 266, 508, 655, 824 |
| Lsp1109I | GCAGC | 3 cut(s) | 337, 1262, 1460 |
| LweI | GCATC | 4 cut(s) | 1102, 1317, 1381, 1514 |
| MaeI | CTAG | 1 cut(s) | 327 |
| MaeII | ACGT | 2 cut(s) | 486, 518 |
| MaeIII | GTNAC | 5 cut(s) | 482, 487, 514, 725, 958 |
| MalI | GATC | 7 cut(s) | 42, 81, 819, 970, 1065, 1123, 1346 |
| MbiI | CCGCTC | 2 cut(s) | 261, 285 |
| MboI | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| MboII | GAAGA | 5 cut(s) | 227, 486, 702, 836, 937 |
| MflI | RGATCY | 1 cut(s) | 1121 |
| MhlI | GDGCHC | 1 cut(s) | 829 |
| MlsI | TGGCCA | 1 cut(s) | 224 |
| MluCI | AATT | 3 cut(s) | 173, 390, 1163 |
| MluNI | TGGCCA | 1 cut(s) | 224 |
| Mly113I | GGCGCC | 1 cut(s) | 1208 |
| MlyI | GAGTC | 4 cut(s) | 30, 590, 850, 1273 |
| MmeI | TCCRAC | 2 cut(s) | 294, 1263 |
| Mox20I | TGGCCA | 1 cut(s) | 224 |
| MroXI | GAANNNNTTC | 1 cut(s) | 428 |
| MscI | TGGCCA | 1 cut(s) | 224 |
| MseI | TTAA | 5 cut(s) | 875, 1166, 1221, 1292, 1425 |
| MslI | CAYNNNNRTG | 2 cut(s) | 644, 1106 |
| Msp20I | TGGCCA | 1 cut(s) | 224 |
| MspA1I | CMGCKG | 1 cut(s) | 1253 |
| MspI | CCGG | 6 cut(s) | 46, 207, 363, 480, 694, 1438 |
| MspR9I | CCNGG | 3 cut(s) | 241, 345, 830 |
| MvaI | CCWGG | 3 cut(s) | 241, 345, 830 |
| MvnI | CGCG | 2 cut(s) | 53, 153 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 28, 159, 168, 198, 207, 245, 409 |
| NarI | GGCGCC | 1 cut(s) | 1208 |
| NdeI | CATATG | 1 cut(s) | 1259 |
| NdeII | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| NlaIII | CATG | 3 cut(s) | 358, 893, 1064 |
| NlaIV | GGNNCC | 7 cut(s) | 211, 407, 510, 657, 745, 826, 1209 |
| NmeAIII | GCCGAG | 2 cut(s) | 57, 177 |
| NmuCI | GTSAC | 4 cut(s) | 482, 487, 514, 725 |
| NspV | TTCGAA | 1 cut(s) | 885 |
| PasI | CCCWGGG | 1 cut(s) | 829 |
| PceI | AGGCCT | 1 cut(s) | 1483 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1231 |
| PdmI | GAANNNNTTC | 1 cut(s) | 428 |
| PfeI | GAWTC | 5 cut(s) | 783, 865, 1007, 1231, 1462 |
| Ple19I | CGATCG | 1 cut(s) | 43 |
| PleI | GAGTC | 4 cut(s) | 30, 589, 849, 1272 |
| PluTI | GGCGCC | 1 cut(s) | 1211 |
| PpsI | GAGTC | 4 cut(s) | 30, 589, 849, 1272 |
| Psp6I | CCWGG | 3 cut(s) | 239, 343, 828 |
| PspEI | GGTNACC | 1 cut(s) | 725 |
| PspFI | CCCAGC | 1 cut(s) | 249 |
| PspGI | CCWGG | 3 cut(s) | 239, 343, 828 |
| PspN4I | GGNNCC | 7 cut(s) | 211, 407, 510, 657, 745, 826, 1209 |
| PspPI | GGNCC | 3 cut(s) | 209, 247, 405 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 53, 85 |
| PstI | CTGCAG | 1 cut(s) | 1450 |
| PsuI | RGATCY | 1 cut(s) | 1121 |
| PvuI | CGATCG | 1 cut(s) | 43 |
| PvuII | CAGCTG | 1 cut(s) | 1253 |
| RseI | CAYNNNNRTG | 2 cut(s) | 644, 1106 |
| SaqAI | TTAA | 5 cut(s) | 875, 1166, 1221, 1292, 1425 |
| Sau3AI | GATC | 7 cut(s) | 40, 79, 817, 968, 1063, 1121, 1344 |
| Sau96I | GGNCC | 3 cut(s) | 209, 247, 405 |
| SchI | GAGTC | 4 cut(s) | 30, 590, 850, 1273 |
| ScrFI | CCNGG | 3 cut(s) | 241, 345, 830 |
| SduI | GDGCHC | 1 cut(s) | 829 |
| SfaNI | GCATC | 4 cut(s) | 1102, 1317, 1381, 1514 |
| SfcI | CTRYAG | 2 cut(s) | 1365, 1446 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 207 |
| SfoI | GGCGCC | 1 cut(s) | 1209 |
| SfuI | TTCGAA | 1 cut(s) | 885 |
| SgrAI | CRCCGGYG | 1 cut(s) | 479 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 644, 1106 |
| SmlI | CTYRAG | 3 cut(s) | 56, 854, 950 |
| SmoI | CTYRAG | 3 cut(s) | 56, 854, 950 |
| Sse9I | AATT | 3 cut(s) | 173, 390, 1163 |
| SseBI | AGGCCT | 1 cut(s) | 1483 |
| SspDI | GGCGCC | 1 cut(s) | 1207 |
| SspMI | CTAG | 1 cut(s) | 327 |
| StuI | AGGCCT | 1 cut(s) | 1483 |
| StyD4I | CCNGG | 3 cut(s) | 239, 343, 828 |
| StyI | CCWWGG | 1 cut(s) | 326 |
| TaaI | ACNGT | 3 cut(s) | 620, 757, 1523 |
| TaiI | ACGT | 2 cut(s) | 489, 521 |
| TaqI | TCGA | 7 cut(s) | 39, 114, 177, 320, 608, 885, 1225 |
| TaqII | GACCGA | 1 cut(s) | 353 |
| TasI | AATT | 3 cut(s) | 173, 390, 1163 |
| TauI | GCSGC | 6 cut(s) | 192, 239, 369, 406, 451, 597 |
| TfiI | GAWTC | 5 cut(s) | 783, 865, 1007, 1231, 1462 |
| Tru1I | TTAA | 5 cut(s) | 875, 1166, 1221, 1292, 1425 |
| Tru9I | TTAA | 5 cut(s) | 875, 1166, 1221, 1292, 1425 |
| TscAI | CASTG | 1 cut(s) | 625 |
| TseFI | GTSAC | 4 cut(s) | 482, 487, 514, 725 |
| TseI | GCWGC | 4 cut(s) | 8, 350, 1250, 1448 |
| Tsp45I | GTSAC | 4 cut(s) | 482, 487, 514, 725 |
| TspDTI | ATGAA | 6 cut(s) | 371, 777, 798, 857, 1393, 1458 |
| TspGWI | ACGGA | 1 cut(s) | 594 |
| TspRI | CASTG | 1 cut(s) | 625 |
| XapI | RAATTY | 1 cut(s) | 173 |
| XmaJI | CCTAGG | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 1 cut(s) | 428 |
| XspI | CTAG | 1 cut(s) | 327 |
| ZraI | GACGTC | 2 cut(s) | 487, 519 |