Rh6AG358400

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000243
Physical Location & Seq
Reverse (-)
55712178 .. 55726627
14450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG358400.1

Sequence Viewer

Length: 1338 bp
ATGGGATGCTGGGCGAGCGAGCTTCAGGTTAGTGGGCTGCAGGGCGGGTTGCAGGTCATACTGCTGGGATCTGCAAGGCGGGCTGGTGCAGTGGCTAGAGCGAAGCTAGCGGGGGCTGCAGGTAGTGGACTTGCAGGAGGCGTGGCAGGATGCACGGGGGCTGCAGCAGGGGTGGGCTGGTATGATCGCAGTACGACTGCGAATGTGAGGAAGACTACGCTGTTGAAAACGTACCAAGTAGAGACGAAATTGAATGCATTCCCAGTACCAAAAAGAAGAAAGACCAAATTGGGTGCATTGGATATTTCTCCAAAAACCTGGACAAAGGGTGAGCTTCTTGGTCGTGGCTCATTCGGCTCTGTCTATCAAGGATCTTGTTCAGATGGATTCGTTTTCGCTGCCAAGGAAGTTTCATTGCTTGATCAAGGAAGTCAGGGGAGGAGCTGTGTTTCTCAACTTCAACAGGAGATTGAGTTTCTCAGTTGGCTTGAACACAAAAACATAGTTCAATACTATGGCTTATTCGAGCCCTCTTGTTTGTGTGCATCATTTTTATCTAAATGGTCTTTACAATATGGATCAAATTTTTATGTGTATGCACCAAATGGATCCATTCGACAACTCTATCAGCGATCGAATCTTTCACTTCCTCGTGTCTCTAAATACACAAAAGAGATCCTTCTTGGTCTAAAGTATCTTCATGACCATAATGTGGTTCACAGGGACATCAAATGTGCAAATATTTTAGTGGATGCTTATGGATCTGCAAAGCTTGCAGATTTTGGATTGGCAAAGATAACCACCAAAATGAATGAAATTCAATCTTTGCAGGGGACTGCATTCTGGATGGTCCCTGAGGTTTTTAGTACAAAAATCAAGAACCAAGGTTATGGACCTCGGATATATATATGGAGCCTTGGTTGCACTGTGTTGGAGATGTTAACAAGGCAGGTTCCCTACCCTGGTTTGGAACCGTTTCAGGCATGTTTTAAGATTGCAATGGGGGAGCTCCCTCACATTCCTCATTTTCATTGTAAGGAGGTGCGAGATTTCATCCATCAGTGCCTACAAGTTAATCCAAATAATCGACCCACTGCTGCTCAGCTCTTATGTCATCTATTTGTCACGTCTGGGCCTATCAAACTACCCCATTTTGGAGATGGTCTGTGTATGCGGATGAAGGAAAAGAACTTTATAGTTGAACGGAAGGGACCTCAGGTTGTCAAGACTCTCGTCACTCATGTCAAGAACCTGGTGACAGTGCAGCAGAGCCTCGCCGCCATCTCCGGTGGCCTCCTTGCAGACATCTCCGACATGCTTCAAAAGCTGGCCGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

445

Amino Acids

48.84

Weight (kDa)

9.38

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 108 - 374 3e-55 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 110 - 372 1.5e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 43, 110, 940
AccB7I CCANNNNNTGG 1 cut(s) 712
AciI CCGC 5 cut(s) 45, 79, 110, 1174, 1278
AclWI GGATC 7 cut(s) 76, 379, 586, 603, 616, 670, 769
AcoI YGGCCR 1 cut(s) 1329
AcsI RAATTY 2 cut(s) 583, 816
AcuI CTGAAG 1 cut(s) 8
AfaI GTAC 4 cut(s) 193, 233, 267, 868
AfiI CCNNNNNNNGG 4 cut(s) 712, 962, 967, 1154
AgsI TTSAA 8 cut(s) 226, 253, 461, 491, 509, 821, 1202, 1322
AjiI CACGTC 1 cut(s) 1128
AjnI CCWGG 3 cut(s) 317, 961, 1251
AluBI AGCT 8 cut(s) 22, 106, 334, 444, 772, 1009, 1105, 1327
AluI AGCT 8 cut(s) 22, 106, 334, 444, 772, 1009, 1105, 1327
Alw21I GWGCWC 1 cut(s) 1011
Alw26I GTCTC 2 cut(s) 236, 661
AlwI GGATC 7 cut(s) 76, 379, 586, 603, 616, 670, 769
AoxI GGCC 3 cut(s) 1133, 1291, 1329
ApeKI GCWGC 7 cut(s) 37, 116, 161, 164, 398, 1097, 1264
ApoI RAATTY 2 cut(s) 583, 816
Asp700I GAANNNNTTC 2 cut(s) 257, 975
AspS9I GGNCC 4 cut(s) 850, 893, 1133, 1211
AsuHPI GGTGA 2 cut(s) 341, 1267
AsuNHI GCTAGC 1 cut(s) 106
AvaII GGWCC 3 cut(s) 850, 893, 1211
AxyI CCTNAGG 2 cut(s) 855, 1215
BamHI GGATCC 1 cut(s) 608
BanII GRGCYC 2 cut(s) 531, 1011
BauI CACGAG 1 cut(s) 651
BbsI GAAGAC 1 cut(s) 218
Bbv12I GWGCWC 1 cut(s) 1011
BbvI GCAGC 7 cut(s) 24, 103, 148, 176, 385, 1084, 1276
BccI CCATC 5 cut(s) 377, 841, 1065, 1154, 1289
BciT130I CCWGG 3 cut(s) 319, 963, 1253
BclI TGATCA 1 cut(s) 421
BcoDI GTCTC 2 cut(s) 236, 661
BfaI CTAG 2 cut(s) 96, 107
BfmI CTRYAG 3 cut(s) 38, 117, 162
BfuAI ACCTGC 3 cut(s) 43, 110, 940
BisI GCNGC 8 cut(s) 38, 117, 162, 165, 399, 1098, 1265, 1278
BlpI GCTNAGC 1 cut(s) 1101
BlsI GCNGC 8 cut(s) 39, 118, 163, 166, 400, 1099, 1266, 1279
Bme1390I CCNGG 3 cut(s) 319, 963, 1253
Bme18I GGWCC 3 cut(s) 850, 893, 1211
BmgBI CACGTC 1 cut(s) 1128
BmgT120I GGNCC 4 cut(s) 850, 893, 1133, 1211
BmiI GGNNCC 6 cut(s) 610, 852, 914, 954, 972, 1212
BmrFI CCNGG 3 cut(s) 319, 963, 1253
BmrI ACTGGG 1 cut(s) 257
BmsI GCATC 3 cut(s) 140, 554, 742
BmtI GCTAGC 1 cut(s) 110
BmuI ACTGGG 1 cut(s) 257
BoxI GACNNNNGTC 1 cut(s) 1232
BpiI GAAGAC 1 cut(s) 218
Bpu1102I GCTNAGC 1 cut(s) 1101
BsaJI CCNNGG 5 cut(s) 402, 883, 896, 916, 961
BsaWI WCCGGW 1 cut(s) 1286
BsaXI ACNNNNNCTCC 6 cut(s) 430, 458, 460, 488, 904, 934
Bsc4I CCNNNNNNNGG 4 cut(s) 712, 962, 967, 1154
Bse1I ACTGG 1 cut(s) 263
Bse21I CCTNAGG 2 cut(s) 855, 1215
Bse3DI GCAATG 2 cut(s) 413, 1005
BseBI CCWGG 3 cut(s) 319, 963, 1253
BseDI CCNNGG 5 cut(s) 402, 883, 896, 916, 961
BseGI GGATG 6 cut(s) 11, 155, 757, 852, 1053, 1182
BseLI CCNNNNNNNGG 4 cut(s) 712, 962, 967, 1154
BseMI GCAATG 2 cut(s) 413, 1005
BseMII CTCAG 4 cut(s) 493, 846, 1115, 1229
BseNI ACTGG 1 cut(s) 263
BseRI GAGGAG 1 cut(s) 454
BseXI GCAGC 7 cut(s) 24, 103, 148, 176, 385, 1084, 1276
BseYI CCCAGC 2 cut(s) 9, 64
BsgI GTGCAG 2 cut(s) 108, 1283
Bsh1285I CGRYCG 1 cut(s) 635
BshFI GGCC 3 cut(s) 1135, 1293, 1331
BsiEI CGRYCG 1 cut(s) 635
BsiHKAI GWGCWC 1 cut(s) 1011
BsiSI CCGG 1 cut(s) 1287
BslFI GGGAC 4 cut(s) 737, 836, 847, 1224
BslI CCNNNNNNNGG 4 cut(s) 712, 962, 967, 1154
BsmAI GTCTC 2 cut(s) 236, 661
BsmBI CGTCTC 1 cut(s) 236
BsmFI GGGAC 4 cut(s) 737, 836, 847, 1224
BsmI GAATGC 3 cut(s) 257, 259, 839
BsnI GGCC 3 cut(s) 1135, 1293, 1331
Bsp1286I GDGCHC 2 cut(s) 531, 1011
Bsp143I GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
Bsp1720I GCTNAGC 1 cut(s) 1101
BspACI CCGC 5 cut(s) 45, 79, 110, 1174, 1278
BspANI GGCC 3 cut(s) 1135, 1293, 1331
BspCNI CTCAG 4 cut(s) 492, 847, 1114, 1228
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 6 cut(s) 610, 852, 914, 954, 972, 1212
BspMAI CTGCAG 3 cut(s) 42, 121, 166
BspMI ACCTGC 3 cut(s) 43, 110, 940
BspOI GCTAGC 1 cut(s) 110
BspPI GGATC 7 cut(s) 76, 379, 586, 603, 616, 670, 769
BsrDI GCAATG 2 cut(s) 413, 1005
BsrI ACTGG 1 cut(s) 263
BssECI CCNNGG 5 cut(s) 402, 883, 896, 916, 961
BssMI GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
BssSI CACGAG 1 cut(s) 651
BssT1I CCWWGG 3 cut(s) 402, 883, 916
Bst2BI CACGAG 1 cut(s) 651
Bst2UI CCWGG 3 cut(s) 319, 963, 1253
Bst4CI ACNGT 3 cut(s) 928, 975, 1261
BstAPI GCANNNNNTGC 1 cut(s) 773
BstC8I GCNNGC 6 cut(s) 16, 20, 81, 108, 774, 1329
BstDEI CTNAG 4 cut(s) 479, 855, 1101, 1215
BstF5I GGATG 6 cut(s) 11, 155, 757, 852, 1053, 1182
BstKTI GATC 9 cut(s) 71, 187, 374, 424, 581, 611, 635, 678, 764
BstMAI GTCTC 2 cut(s) 236, 661
BstMBI GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
BstMCI CGRYCG 1 cut(s) 635
BstMWI GCNNNNNNNGC 8 cut(s) 15, 80, 107, 116, 354, 773, 921, 1324
BstNI CCWGG 3 cut(s) 319, 963, 1253
BstNSI RCATGY 2 cut(s) 987, 1318
BstPAI GACNNNNGTC 1 cut(s) 1232
BstSCI CCNGG 3 cut(s) 317, 961, 1251
BstSFI CTRYAG 3 cut(s) 38, 117, 162
BstV1I GCAGC 7 cut(s) 24, 103, 148, 176, 385, 1084, 1276
BstV2I GAAGAC 1 cut(s) 218
BstX2I RGATCY 5 cut(s) 68, 371, 608, 675, 761
BstXI CCANNNNNNTGG 2 cut(s) 318, 890
BstYI RGATCY 5 cut(s) 68, 371, 608, 675, 761
Bsu36I CCTNAGG 2 cut(s) 855, 1215
BsuRI GGCC 3 cut(s) 1135, 1293, 1331
BtrI CACGTC 1 cut(s) 1128
BtsCI GGATG 6 cut(s) 11, 155, 757, 852, 1053, 1182
BtsI GCAGTG 2 cut(s) 96, 1092
BtsIMutI CAGTG 5 cut(s) 96, 924, 1067, 1092, 1266
BveI ACCTGC 3 cut(s) 43, 110, 940
Cac8I GCNNGC 6 cut(s) 16, 20, 81, 108, 774, 1329
CciI TCATGA 1 cut(s) 700
Cfr13I GGNCC 4 cut(s) 850, 893, 1133, 1211
CsiI ACCWGGT 1 cut(s) 1251
Csp6I GTAC 4 cut(s) 192, 232, 266, 867
CviAII CATG 4 cut(s) 701, 984, 1241, 1315
CviQI GTAC 4 cut(s) 192, 232, 266, 867
DdeI CTNAG 4 cut(s) 479, 855, 1101, 1215
DpnI GATC 9 cut(s) 70, 186, 373, 423, 580, 610, 634, 677, 763
DpnII GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
EaeI YGGCCR 1 cut(s) 1329
Ecl136II GAGCTC 1 cut(s) 1009
Eco130I CCWWGG 3 cut(s) 402, 883, 916
Eco24I GRGCYC 2 cut(s) 531, 1011
Eco47I GGWCC 3 cut(s) 850, 893, 1211
Eco53kI GAGCTC 1 cut(s) 1009
Eco57I CTGAAG 1 cut(s) 8
Eco81I CCTNAGG 2 cut(s) 855, 1215
EcoICRI GAGCTC 1 cut(s) 1009
EcoO109I RGGNCCY 1 cut(s) 1211
EcoRII CCWGG 3 cut(s) 317, 961, 1251
EcoT14I CCWWGG 3 cut(s) 402, 883, 916
EcoT22I ATGCAT 1 cut(s) 259
EcoT38I GRGCYC 2 cut(s) 531, 1011
ErhI CCWWGG 3 cut(s) 402, 883, 916
Esp3I CGTCTC 1 cut(s) 236
FaeI CATG 4 cut(s) 704, 987, 1244, 1318
FalI AAGNNNNNCTT 2 cut(s) 663, 695
FaqI GGGAC 4 cut(s) 737, 836, 847, 1224
FatI CATG 4 cut(s) 700, 983, 1240, 1314
FauI CCCGC 3 cut(s) 38, 72, 103
FbaI TGATCA 1 cut(s) 421
Fnu4HI GCNGC 8 cut(s) 38, 117, 162, 165, 399, 1098, 1265, 1278
FokI GGATG 6 cut(s) 18, 162, 764, 859, 1040, 1189
FriOI GRGCYC 2 cut(s) 531, 1011
Fsp4HI GCNGC 8 cut(s) 38, 117, 162, 165, 399, 1098, 1265, 1278
FspBI CTAG 2 cut(s) 96, 107
GluI GCNGC 8 cut(s) 38, 117, 162, 165, 399, 1098, 1265, 1278
GsaI CCCAGC 2 cut(s) 13, 68
HaeIII GGCC 3 cut(s) 1135, 1293, 1331
HapII CCGG 1 cut(s) 1287
Hin1II CATG 4 cut(s) 704, 987, 1244, 1318
HincII GTYRAC 1 cut(s) 942
HindII GTYRAC 1 cut(s) 942
HindIII AAGCTT 1 cut(s) 770
HinfI GANTC 3 cut(s) 387, 637, 1228
HpaI GTTAAC 1 cut(s) 942
HpaII CCGG 1 cut(s) 1287
HphI GGTGA 2 cut(s) 341, 1267
Hpy166II GTNNAC 3 cut(s) 128, 718, 942
Hpy188I TCNGA 3 cut(s) 382, 900, 1312
Hpy188III TCNNGA 5 cut(s) 701, 844, 877, 1225, 1246
Hpy8I GTNNAC 3 cut(s) 128, 718, 942
HpyAV CCTTC 3 cut(s) 689, 1174, 1201
HpyCH4III ACNGT 3 cut(s) 928, 975, 1261
HpyCH4IV ACGT 2 cut(s) 230, 1127
HpyF10VI GCNNNNNNNGC 8 cut(s) 15, 80, 107, 116, 354, 773, 921, 1324
HpyF3I CTNAG 4 cut(s) 479, 855, 1101, 1215
HpySE526I ACGT 2 cut(s) 230, 1127
Hsp92II CATG 4 cut(s) 704, 987, 1244, 1318
Ksp22I TGATCA 1 cut(s) 421
KspAI GTTAAC 1 cut(s) 942
Kzo9I GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
LmnI GCTCC 4 cut(s) 441, 912, 1006, 1014
Lsp1109I GCAGC 7 cut(s) 24, 103, 148, 176, 385, 1084, 1276
LweI GCATC 3 cut(s) 140, 554, 742
MabI ACCWGGT 1 cut(s) 1251
MaeI CTAG 2 cut(s) 96, 107
MaeII ACGT 2 cut(s) 230, 1127
MaeIII GTNAC 3 cut(s) 1123, 1234, 1255
MalI GATC 9 cut(s) 70, 186, 373, 423, 580, 610, 634, 677, 763
MboI GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
MboII GAAGA 3 cut(s) 223, 288, 689
MflI RGATCY 5 cut(s) 68, 371, 608, 675, 761
MhlI GDGCHC 2 cut(s) 531, 1011
MluCI AATT 4 cut(s) 248, 287, 583, 816
MlyI GAGTC 1 cut(s) 1222
MmeI TCCRAC 2 cut(s) 912, 1335
Mph1103I ATGCAT 1 cut(s) 259
MroXI GAANNNNTTC 2 cut(s) 257, 975
MseI TTAA 3 cut(s) 941, 990, 1074
MslI CAYNNNNRTG 1 cut(s) 806
MspI CCGG 1 cut(s) 1287
MspR9I CCNGG 3 cut(s) 319, 963, 1253
Mva1269I GAATGC 3 cut(s) 257, 259, 839
MvaI CCWGG 3 cut(s) 319, 963, 1253
MwoI GCNNNNNNNGC 8 cut(s) 15, 80, 107, 116, 354, 773, 921, 1324
NdeII GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
NheI GCTAGC 1 cut(s) 106
NlaIII CATG 4 cut(s) 704, 987, 1244, 1318
NlaIV GGNNCC 6 cut(s) 610, 852, 914, 954, 972, 1212
NmuCI GTSAC 3 cut(s) 1123, 1234, 1255
NsiI ATGCAT 1 cut(s) 259
NspI RCATGY 2 cut(s) 987, 1318
PagI TCATGA 1 cut(s) 700
PctI GAATGC 3 cut(s) 257, 259, 839
PdmI GAANNNNTTC 2 cut(s) 257, 975
PfeI GAWTC 2 cut(s) 387, 637
PflMI CCANNNNNTGG 1 cut(s) 712
PkrI GCNGC 8 cut(s) 39, 118, 163, 166, 400, 1099, 1266, 1279
Ple19I CGATCG 1 cut(s) 635
PleI GAGTC 1 cut(s) 1222
PpsI GAGTC 1 cut(s) 1222
PpuMI RGGWCCY 1 cut(s) 1211
PshAI GACNNNNGTC 1 cut(s) 1232
Psp124BI GAGCTC 1 cut(s) 1011
Psp5II RGGWCCY 1 cut(s) 1211
Psp6I CCWGG 3 cut(s) 317, 961, 1251
PspFI CCCAGC 2 cut(s) 9, 64
PspGI CCWGG 3 cut(s) 317, 961, 1251
PspN4I GGNNCC 6 cut(s) 610, 852, 914, 954, 972, 1212
PspPI GGNCC 4 cut(s) 850, 893, 1133, 1211
PspPPI RGGWCCY 1 cut(s) 1211
PstI CTGCAG 3 cut(s) 42, 121, 166
PsuI RGATCY 5 cut(s) 68, 371, 608, 675, 761
PvuI CGATCG 1 cut(s) 635
RsaI GTAC 4 cut(s) 193, 233, 267, 868
RsaNI GTAC 4 cut(s) 192, 232, 266, 867
RseI CAYNNNNRTG 1 cut(s) 806
SacI GAGCTC 1 cut(s) 1011
SaqAI TTAA 3 cut(s) 941, 990, 1074
SatI GCNGC 8 cut(s) 38, 117, 162, 165, 399, 1098, 1265, 1278
Sau3AI GATC 9 cut(s) 68, 184, 371, 421, 578, 608, 632, 675, 761
Sau96I GGNCC 4 cut(s) 850, 893, 1133, 1211
SchI GAGTC 1 cut(s) 1222
ScrFI CCNGG 3 cut(s) 319, 963, 1253
SduI GDGCHC 2 cut(s) 531, 1011
SexAI ACCWGGT 1 cut(s) 1251
SfaNI GCATC 3 cut(s) 140, 554, 742
SfcI CTRYAG 3 cut(s) 38, 117, 162
SinI GGWCC 3 cut(s) 850, 893, 1211
SmiMI CAYNNNNRTG 1 cut(s) 806
Sse9I AATT 4 cut(s) 248, 287, 583, 816
SsiI CCGC 5 cut(s) 45, 79, 110, 1174, 1278
SspI AATATT 1 cut(s) 742
SspMI CTAG 2 cut(s) 96, 107
SstI GAGCTC 1 cut(s) 1011
StyD4I CCNGG 3 cut(s) 317, 961, 1251
StyI CCWWGG 3 cut(s) 402, 883, 916
TaaI ACNGT 3 cut(s) 928, 975, 1261
TaiI ACGT 2 cut(s) 233, 1130
TaqI TCGA 4 cut(s) 525, 616, 635, 1087
TasI AATT 4 cut(s) 248, 287, 583, 816
TatI WGTACW 1 cut(s) 866
TauI GCSGC 1 cut(s) 1280
TfiI GAWTC 2 cut(s) 387, 637
Tru1I TTAA 3 cut(s) 941, 990, 1074
Tru9I TTAA 3 cut(s) 941, 990, 1074
TscAI CASTG 5 cut(s) 96, 931, 1067, 1099, 1266
TseFI GTSAC 3 cut(s) 1123, 1234, 1255
TseI GCWGC 7 cut(s) 37, 116, 161, 164, 398, 1097, 1264
Tsp45I GTSAC 3 cut(s) 1123, 1234, 1255
TspDTI ATGAA 7 cut(s) 402, 689, 824, 828, 1019, 1042, 1193
TspGWI ACGGA 1 cut(s) 1219
TspRI CASTG 5 cut(s) 96, 931, 1067, 1099, 1266
Van91I CCANNNNNTGG 1 cut(s) 712
VpaK11BI GGWCC 3 cut(s) 850, 893, 1211
XapI RAATTY 2 cut(s) 583, 816
XceI RCATGY 2 cut(s) 987, 1318
XcmI CCANNNNNNNNNTGG 1 cut(s) 1157
XmnI GAANNNNTTC 2 cut(s) 257, 975
XspI CTAG 2 cut(s) 96, 107
Zsp2I ATGCAT 1 cut(s) 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.