Rh7BG466800

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000243
Physical Location & Seq
Forward (+)
55215700 .. 55230856
15157 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG466800.1

Sequence Viewer

Length: 1140 bp
ATGCATCGCTTACCGCGTTTTTTCTCTGGCAGCAAGGATCGAAATAAATCCATGGATCCGAAGAAGGTCCGGCGGTTGCCCAAGTTGGAGCGCCGCAATGCGGTCAAGCACATTGACTACGACGCCTCTTCGTCCTCCTCCTCCCGCGACCACTCCACCCACGCGCAGCAGCTCCACACGCGCTCGCTCGACCTGTCGGACCGGACCAGCTTCCGGGTCGAAGGAAATGACGGCGAGTTCGAACGGATTTGCGCTGAGCTGGGCTTCTCCGGCCCAGACGACTTCGCGATACCCGAGGCGGCCTGGGAGTCCCGGAGGATCCGGTCCACCAACTCCGATGTTCTCCCCTTGTCAAAACTGTACCGGGTGGACAGTTCGGGTAGTCCGAGACCCGACCCGAAGGACGAACCGGAGGAGGATGATGCCGTGGCGGAATTGCTCAATAGAATTAGGGATAGCGTTACCGTTACGGCGGACGAGCCGTCCGAGTCGGCGGGGCCGAGCGGGTGTTGTACTGCGAGTCGTAGTTGTAGTAGTGTTAGTGTCGGAATTAAGGGAGAGCGGCCGCCGGGGCTGAAGCCGCCGCCGTCGATGACTAGGGTTCCGGTGATTGACGATGGATGCTCGACTTGGGACATTTTGAGGGACTTCGCTCCAGAAGAAGAGAGGGATATGGTGCGGAGTAGGTTTGTTCCTTCTTCTTCTTCTGATGAAGAAGATGAAGAACAAGAACTAGAAGAAGAACTTGAAGAAGGAGAGGATGTTGTGGCGGATGAGATTAGAGAAACCGTGGCAAACTCCGGCGGGTGTTCGTTTACTACTTCCAATGACGACGACTCTTCCAGCACCACCACAGATCCTTCGCCGAATGGGAAGCCTAAGCTTATTGTCACTAGTTGGGAGAAGGGTGACCTTCTTGGCAGTGGCTCTTTCGGGTCGGTGTATGAAGGAATTTCTGATGGCGGATGCTTCATTGCTGTTAAGGAAGTTTCCTTGCTTGATCAAGGAAGCCTGGGAAGGCAAAGAGTTTCTCAACTTGAACAGAATCAAGCAATTGCATTTGACTATACTGGTCAAAACTCTCCAGAGACATCCAAGAGTATTGGAACCATAAAACAAACCAATCTCTTTAAAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

379

Amino Acids

41.52

Weight (kDa)

4.69

Isoelectric Point (pI)

54.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 504, 562
AccII CGCG 5 cut(s) 16, 147, 164, 181, 287
AclWI GGATC 6 cut(s) 45, 50, 63, 313, 326, 851
AcoI YGGCCR 1 cut(s) 563
AcsI RAATTY 1 cut(s) 951
AcuI CTGAAG 1 cut(s) 596
AcyI GRCGYC 1 cut(s) 123
AfaI GTAC 2 cut(s) 362, 514
AfiI CCNNNNNNNGG 2 cut(s) 100, 213
AgsI TTSAA 2 cut(s) 749, 1040
AhdI GACNNNNNGTC 1 cut(s) 481
AhlI ACTAGT 1 cut(s) 893
AjnI CCWGG 2 cut(s) 302, 1011
AluBI AGCT 4 cut(s) 172, 210, 259, 883
AluI AGCT 4 cut(s) 172, 210, 259, 883
Alw26I GTCTC 2 cut(s) 382, 1082
AlwI GGATC 6 cut(s) 45, 50, 63, 313, 326, 851
Ama87I CYCGRG 1 cut(s) 293
AoxI GGCC 4 cut(s) 271, 300, 497, 563
ApeKI GCWGC 3 cut(s) 30, 166, 169
ApoI RAATTY 1 cut(s) 951
ArsI GACNNNNNNTTYG 2 cut(s) 221, 253
AspLEI GCGC 4 cut(s) 93, 166, 183, 254
AspS9I GGNCC 6 cut(s) 67, 199, 204, 272, 324, 497
AsuC2I CCSGG 4 cut(s) 215, 313, 365, 570
AsuHPI GGTGA 2 cut(s) 619, 920
AsuII TTCGAA 1 cut(s) 240
AvaI CYCGRG 1 cut(s) 293
AvaII GGWCC 4 cut(s) 67, 199, 204, 324
BamHI GGATCC 2 cut(s) 55, 318
BbvI GCAGC 3 cut(s) 42, 178, 181
BccI CCATC 2 cut(s) 611, 953
BceAI ACGGC 5 cut(s) 247, 410, 466, 486, 571
BciT130I CCWGG 2 cut(s) 304, 1013
BclI TGATCA 1 cut(s) 1000
BcnI CCSGG 4 cut(s) 215, 313, 365, 570
BcoDI GTCTC 2 cut(s) 382, 1082
BcuI ACTAGT 1 cut(s) 893
BfaI CTAG 3 cut(s) 597, 734, 894
BfoI RGCGCY 1 cut(s) 94
BglI GCCNNNNNGGC 1 cut(s) 571
BisI GCNGC 9 cut(s) 31, 94, 167, 170, 300, 563, 566, 581, 584
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 9 cut(s) 32, 95, 168, 171, 301, 564, 567, 582, 585
Bme1390I CCNGG 6 cut(s) 215, 304, 313, 365, 570, 1013
Bme18I GGWCC 4 cut(s) 67, 199, 204, 324
BmeRI GACNNNNNGTC 1 cut(s) 481
BmeT110I CYCGRG 1 cut(s) 293
BmgT120I GGNCC 6 cut(s) 67, 199, 204, 272, 324, 497
BmiI GGNNCC 5 cut(s) 57, 320, 498, 603, 1108
BmrFI CCNGG 6 cut(s) 215, 304, 313, 365, 570, 1013
BmsI GCATC 4 cut(s) 13, 412, 611, 956
BpmI CTGGAG 2 cut(s) 639, 1068
Bpu10I CCTNAGC 1 cut(s) 879
Bpu1102I GCTNAGC 1 cut(s) 255
Bpu14I TTCGAA 1 cut(s) 240
BpuMI CCSGG 4 cut(s) 215, 313, 365, 570
BsaHI GRCGYC 1 cut(s) 123
BsaI GGTCTC 1 cut(s) 382
BsaJI CCNNGG 7 cut(s) 51, 294, 303, 426, 569, 789, 1012
BsaWI WCCGGW 4 cut(s) 201, 321, 409, 604
BsaXI ACNNNNNCTCC 2 cut(s) 747, 777
Bsc4I CCNNNNNNNGG 2 cut(s) 100, 213
Bse1I ACTGG 1 cut(s) 1075
Bse3DI GCAATG 2 cut(s) 103, 972
BseBI CCWGG 2 cut(s) 304, 1013
BseDI CCNNGG 7 cut(s) 51, 294, 303, 426, 569, 789, 1012
BseGI GGATG 6 cut(s) 424, 626, 766, 778, 971, 1091
BseLI CCNNNNNNNGG 2 cut(s) 100, 213
BseMI GCAATG 2 cut(s) 103, 972
BseMII CTCAG 1 cut(s) 246
BseNI ACTGG 1 cut(s) 1075
BseRI GAGGAG 3 cut(s) 127, 130, 428
BseX3I CGGCCG 1 cut(s) 563
BseXI GCAGC 3 cut(s) 42, 178, 181
BseYI CCCAGC 1 cut(s) 259
Bsh1236I CGCG 5 cut(s) 16, 147, 164, 181, 287
Bsh1285I CGRYCG 1 cut(s) 566
BshFI GGCC 4 cut(s) 273, 302, 499, 565
BsiEI CGRYCG 1 cut(s) 566
BsiHKCI CYCGRG 1 cut(s) 293
BslFI GGGAC 3 cut(s) 295, 647, 659
BslI CCNNNNNNNGG 2 cut(s) 100, 213
BsmAI GTCTC 2 cut(s) 382, 1082
BsmFI GGGAC 3 cut(s) 295, 647, 659
BsnI GGCC 4 cut(s) 273, 302, 499, 565
Bso31I GGTCTC 1 cut(s) 382
BsoBI CYCGRG 1 cut(s) 293
Bsp119I TTCGAA 1 cut(s) 240
Bsp143I GATC 5 cut(s) 37, 55, 318, 856, 1000
Bsp1720I GCTNAGC 1 cut(s) 255
Bsp19I CCATGG 1 cut(s) 51
Bsp68I TCGCGA 1 cut(s) 287
BspANI GGCC 4 cut(s) 273, 302, 499, 565
BspCNI CTCAG 1 cut(s) 247
BspFNI CGCG 5 cut(s) 16, 147, 164, 181, 287
BspLI GGNNCC 5 cut(s) 57, 320, 498, 603, 1108
BspPI GGATC 6 cut(s) 45, 50, 63, 313, 326, 851
BspT104I TTCGAA 1 cut(s) 240
BspTNI GGTCTC 1 cut(s) 382
BsrBI CCGCTC 2 cut(s) 504, 562
BsrDI GCAATG 2 cut(s) 103, 972
BsrI ACTGG 1 cut(s) 1075
BssECI CCNNGG 7 cut(s) 51, 294, 303, 426, 569, 789, 1012
BssMI GATC 5 cut(s) 37, 55, 318, 856, 1000
BssNI GRCGYC 1 cut(s) 123
BssT1I CCWWGG 1 cut(s) 51
Bst2UI CCWGG 2 cut(s) 304, 1013
Bst4CI ACNGT 4 cut(s) 360, 374, 466, 790
Bst6I CTCTTC 3 cut(s) 133, 657, 844
BstACI GRCGYC 1 cut(s) 123
BstBI TTCGAA 1 cut(s) 240
BstC8I GCNNGC 1 cut(s) 185
BstDEI CTNAG 2 cut(s) 255, 879
BstDSI CCRYGG 3 cut(s) 51, 426, 789
BstEII GGTNACC 1 cut(s) 908
BstF5I GGATG 6 cut(s) 424, 626, 766, 778, 971, 1091
BstFNI CGCG 5 cut(s) 16, 147, 164, 181, 287
BstH2I RGCGCY 1 cut(s) 94
BstHHI GCGC 4 cut(s) 93, 166, 183, 254
BstKTI GATC 5 cut(s) 40, 58, 321, 859, 1003
BstMAI GTCTC 2 cut(s) 382, 1082
BstMBI GATC 5 cut(s) 37, 55, 318, 856, 1000
BstMCI CGRYCG 1 cut(s) 566
BstMWI GCNNNNNNNGC 4 cut(s) 178, 270, 571, 580
BstNI CCWGG 2 cut(s) 304, 1013
BstPI GGTNACC 1 cut(s) 908
BstSCI CCNGG 6 cut(s) 213, 302, 311, 363, 568, 1011
BstUI CGCG 5 cut(s) 16, 147, 164, 181, 287
BstV1I GCAGC 3 cut(s) 42, 178, 181
BstX2I RGATCY 3 cut(s) 55, 318, 856
BstYI RGATCY 3 cut(s) 55, 318, 856
BstZI CGGCCG 1 cut(s) 563
BsuRI GGCC 4 cut(s) 273, 302, 499, 565
BtgI CCRYGG 3 cut(s) 51, 426, 789
BtsCI GGATG 6 cut(s) 424, 626, 766, 778, 971, 1091
BtsI GCAGTG 1 cut(s) 928
BtsIMutI CAGTG 1 cut(s) 928
BtuMI TCGCGA 1 cut(s) 287
Cac8I GCNNGC 1 cut(s) 185
CciNI GCGGCCGC 1 cut(s) 563
CfoI GCGC 4 cut(s) 93, 166, 183, 254
Cfr13I GGNCC 6 cut(s) 67, 199, 204, 272, 324, 497
CpoI CGGWCCG 1 cut(s) 199
CseI GACGC 1 cut(s) 131
Csp6I GTAC 2 cut(s) 361, 513
CspI CGGWCCG 1 cut(s) 199
CviAII CATG 1 cut(s) 52
CviQI GTAC 2 cut(s) 361, 513
DdeI CTNAG 2 cut(s) 255, 879
DpnI GATC 5 cut(s) 39, 57, 320, 858, 1002
DpnII GATC 5 cut(s) 37, 55, 318, 856, 1000
DraI TTTAAA 1 cut(s) 1132
DriI GACNNNNNGTC 1 cut(s) 481
EaeI YGGCCR 1 cut(s) 563
EagI CGGCCG 1 cut(s) 563
Eam1104I CTCTTC 3 cut(s) 133, 657, 844
Eam1105I GACNNNNNGTC 1 cut(s) 481
EarI CTCTTC 3 cut(s) 133, 657, 844
EciI GGCGGA 4 cut(s) 446, 488, 785, 978
EclXI CGGCCG 1 cut(s) 563
Eco130I CCWWGG 1 cut(s) 51
Eco31I GGTCTC 1 cut(s) 382
Eco47I GGWCC 4 cut(s) 67, 199, 204, 324
Eco52I CGGCCG 1 cut(s) 563
Eco57I CTGAAG 1 cut(s) 596
Eco88I CYCGRG 1 cut(s) 293
Eco91I GGTNACC 1 cut(s) 908
EcoO65I GGTNACC 1 cut(s) 908
EcoRII CCWGG 2 cut(s) 302, 1011
EcoT14I CCWWGG 1 cut(s) 51
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 51
FaeI CATG 1 cut(s) 55
FaiI YATR 6 cut(s) 53, 674, 945, 1068, 1112, 1138
FalI AAGNNNNNCTT 2 cut(s) 729, 761
FaqI GGGAC 3 cut(s) 295, 647, 659
FatI CATG 1 cut(s) 51
FauI CCCGC 4 cut(s) 152, 487, 497, 797
FbaI TGATCA 1 cut(s) 1000
Fnu4HI GCNGC 9 cut(s) 31, 94, 167, 170, 300, 563, 566, 581, 584
FokI GGATG 6 cut(s) 431, 633, 773, 785, 978, 1078
Fsp4HI GCNGC 9 cut(s) 31, 94, 167, 170, 300, 563, 566, 581, 584
FspBI CTAG 3 cut(s) 597, 734, 894
GlaI GCGC 4 cut(s) 92, 165, 182, 253
GluI GCNGC 9 cut(s) 31, 94, 167, 170, 300, 563, 566, 581, 584
GsaI CCCAGC 1 cut(s) 263
GsuI CTGGAG 2 cut(s) 639, 1068
HaeII RGCGCY 1 cut(s) 94
HaeIII GGCC 4 cut(s) 273, 302, 499, 565
HgaI GACGC 1 cut(s) 131
HhaI GCGC 4 cut(s) 93, 166, 183, 254
Hin1I GRCGYC 1 cut(s) 123
Hin1II CATG 1 cut(s) 55
Hin6I GCGC 4 cut(s) 91, 164, 181, 252
HinP1I GCGC 4 cut(s) 91, 164, 181, 252
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 5 cut(s) 308, 488, 520, 836, 1045
HphI GGTGA 2 cut(s) 619, 920
Hpy166II GTNNAC 3 cut(s) 327, 370, 816
Hpy188I TCNGA 8 cut(s) 60, 199, 337, 387, 487, 548, 709, 958
Hpy188III TCNNGA 3 cut(s) 286, 656, 1085
Hpy8I GTNNAC 3 cut(s) 327, 370, 816
Hpy99I CGWCG 3 cut(s) 125, 592, 836
HpyCH4III ACNGT 4 cut(s) 360, 374, 466, 790
HpyCH4V TGCA 2 cut(s) 4, 1058
HpyF10VI GCNNNNNNNGC 4 cut(s) 178, 270, 571, 580
HpyF3I CTNAG 2 cut(s) 255, 879
Hsp92I GRCGYC 1 cut(s) 123
Hsp92II CATG 1 cut(s) 55
HspAI GCGC 4 cut(s) 91, 164, 181, 252
Ksp22I TGATCA 1 cut(s) 1000
Kzo9I GATC 5 cut(s) 37, 55, 318, 856, 1000
LmnI GCTCC 3 cut(s) 88, 177, 658
Lsp1109I GCAGC 3 cut(s) 42, 178, 181
LweI GCATC 4 cut(s) 13, 412, 611, 956
MaeI CTAG 3 cut(s) 597, 734, 894
MaeIII GTNAC 4 cut(s) 460, 466, 889, 908
MalI GATC 5 cut(s) 39, 57, 320, 858, 1002
MbiI CCGCTC 2 cut(s) 504, 562
MboI GATC 5 cut(s) 37, 55, 318, 856, 1000
MfeI CAATTG 1 cut(s) 1053
MflI RGATCY 3 cut(s) 55, 318, 856
MluCI AATT 5 cut(s) 434, 447, 549, 951, 1053
MlyI GAGTC 4 cut(s) 317, 497, 529, 830
MmeI TCCRAC 3 cut(s) 66, 177, 526
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 3 cut(s) 552, 981, 1131
MspR9I CCNGG 6 cut(s) 215, 304, 313, 365, 570, 1013
MunI CAATTG 1 cut(s) 1053
MvaI CCWGG 2 cut(s) 304, 1013
MvnI CGCG 5 cut(s) 16, 147, 164, 181, 287
MwoI GCNNNNNNNGC 4 cut(s) 178, 270, 571, 580
NciI CCSGG 4 cut(s) 215, 313, 365, 570
NcoI CCATGG 1 cut(s) 51
NdeII GATC 5 cut(s) 37, 55, 318, 856, 1000
NlaIII CATG 1 cut(s) 55
NlaIV GGNNCC 5 cut(s) 57, 320, 498, 603, 1108
NmeAIII GCCGAG 1 cut(s) 525
NmuCI GTSAC 2 cut(s) 889, 908
NotI GCGGCCGC 1 cut(s) 563
NruI TCGCGA 1 cut(s) 287
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 240
PcsI WCGNNNNNNNCGW 6 cut(s) 13, 237, 291, 383, 483, 497
PfeI GAWTC 1 cut(s) 1045
PfoI TCCNGGA 1 cut(s) 311
PkrI GCNGC 9 cut(s) 32, 95, 168, 171, 301, 564, 567, 582, 585
PleI GAGTC 4 cut(s) 316, 496, 528, 830
PpsI GAGTC 4 cut(s) 316, 496, 528, 830
Psp6I CCWGG 2 cut(s) 302, 1011
PspEI GGTNACC 1 cut(s) 908
PspFI CCCAGC 1 cut(s) 259
PspGI CCWGG 2 cut(s) 302, 1011
PspN4I GGNNCC 5 cut(s) 57, 320, 498, 603, 1108
PspPI GGNCC 6 cut(s) 67, 199, 204, 272, 324, 497
PsuI RGATCY 3 cut(s) 55, 318, 856
RruI TCGCGA 1 cut(s) 287
RsaI GTAC 2 cut(s) 362, 514
RsaNI GTAC 2 cut(s) 361, 513
Rsr2I CGGWCCG 1 cut(s) 199
RsrII CGGWCCG 1 cut(s) 199
SaqAI TTAA 3 cut(s) 552, 981, 1131
SatI GCNGC 9 cut(s) 31, 94, 167, 170, 300, 563, 566, 581, 584
Sau3AI GATC 5 cut(s) 37, 55, 318, 856, 1000
Sau96I GGNCC 6 cut(s) 67, 199, 204, 272, 324, 497
SchI GAGTC 4 cut(s) 317, 497, 529, 830
ScrFI CCNGG 6 cut(s) 215, 304, 313, 365, 570, 1013
SetI ASST 8 cut(s) 69, 174, 195, 212, 261, 689, 885, 915
SfaNI GCATC 4 cut(s) 13, 412, 611, 956
SfuI TTCGAA 1 cut(s) 240
SinI GGWCC 4 cut(s) 67, 199, 204, 324
SpeI ACTAGT 1 cut(s) 893
Sse9I AATT 5 cut(s) 434, 447, 549, 951, 1053
SspMI CTAG 3 cut(s) 597, 734, 894
StyD4I CCNGG 6 cut(s) 213, 302, 311, 363, 568, 1011
StyI CCWWGG 1 cut(s) 51
TaaI ACNGT 4 cut(s) 360, 374, 466, 790
TaqI TCGA 6 cut(s) 40, 189, 219, 240, 590, 626
TasI AATT 5 cut(s) 434, 447, 549, 951, 1053
TatI WGTACW 1 cut(s) 512
TauI GCSGC 6 cut(s) 96, 302, 565, 568, 583, 586
TfiI GAWTC 1 cut(s) 1045
Tru1I TTAA 3 cut(s) 552, 981, 1131
Tru9I TTAA 3 cut(s) 552, 981, 1131
TscAI CASTG 1 cut(s) 928
TseFI GTSAC 2 cut(s) 889, 908
TseI GCWGC 3 cut(s) 30, 166, 169
Tsp45I GTSAC 2 cut(s) 889, 908
TspDTI ATGAA 4 cut(s) 726, 735, 960, 961
TspGWI ACGGA 1 cut(s) 259
TspRI CASTG 1 cut(s) 928
VpaK11BI GGWCC 4 cut(s) 67, 199, 204, 324
XapI RAATTY 1 cut(s) 951
XspI CTAG 3 cut(s) 597, 734, 894
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.