RchiOBHm_Chr1g0352161

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000243
Physical Location & Seq
Reverse (-)
45394712 .. 45399385
4674 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57790

Sequence Viewer

Length: 954 bp
ATGCAAAGAATGAGCCATGAGATGCAATATATTGAATTCCTTGGAAAAATGAATTTTTCTCCTGATAGCAAATGGACAAGAATTCAGCAACTGGGTCGTGGGTCTTCTGGATCTGTCTTCGAAGGATGTTTTGAGAACGGATTCCACTTTGCTGTCAAAGTAGTTTCCTTGCATGATGAAGGAAGTCGAGGGACGAACTGCGTCAATCAACTTGAACAGGAGATTGCTCTTTGGAGTCGGTTTAAACATCAGAACATAGTTCAATATTATTACTCATATAAGGATGAACTGAACCTTTATATGTTCATGGAGCTTGTACCTCGAGGATCCCTACGAAGCTTCTATCAGACAAATCCCGTTTCCTGTCTTCTCGTCTCCAAATACACAAAAGATATTCTTCATGGTCTTAAGTATCTTCATGACCACAATGTGATTCACAGGGACATAAAATGTGCAAATATATTGATAGATGCTCAAGGATCTGCAAAGCTCGCAGATTTGGGAGTGGGAAAGATAATCAGAATGAATGATATTAAGTCTTTCCAGGGCAGCGCATTTTGGACAGCTCCTGAGGTTCTGAGTGCAATAAGGCATAACCAAGGTTATGGGATTTCAGCTGATATATGGAGCCTTGGTTGCACCGTATTGGAGATGTTAACCTGCAGGCGTGTTCCTTACCAGGATATGACACCGGAACAGGCATTATGGAGATCATTGAACGGGAAGCTCCCTGAGATTCCTGATTTTCTCTCAGTGGATGCACAAGATTTCATCCAGAAATGCCTAAAGATCAACCCAAATGATCGTCCCACTGCTTCAGAGCTCTTAGAGCACCCATTTGTCTTGAGGCGGCCAAGGTCGGGCAACATGCCAAGGCGAGGTTCCGTTCTTAAGAACATTTTCAAAAAGTTGTCAAAAAAATTTTGCAAATGTTTTTACGAATATAGTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

317

Amino Acids

36.59

Weight (kDa)

9.03

Isoelectric Point (pI)

41.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 26 - 281 7.4e-63 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 28 - 277 1.2e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 321
Acc36I ACCTGC 1 cut(s) 668
AciI CCGC 1 cut(s) 850
AclWI GGATC 4 cut(s) 118, 321, 334, 487
AcoI YGGCCR 1 cut(s) 851
AcsI RAATTY 4 cut(s) 35, 52, 81, 920
AcuI CTGAAG 1 cut(s) 801
AdeI CACNNNGTG 1 cut(s) 430
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 2 cut(s) 860, 878
AflII CTTAAG 2 cut(s) 407, 890
AgsI TTSAA 5 cut(s) 35, 215, 263, 718, 904
AjnI CCWGG 2 cut(s) 543, 678
AjuI GAANNNNNNNTTGG 2 cut(s) 865, 897
AluBI AGCT 7 cut(s) 313, 339, 490, 566, 617, 727, 823
AluI AGCT 7 cut(s) 313, 339, 490, 566, 617, 727, 823
Alw21I GWGCWC 2 cut(s) 825, 834
Alw26I GTCTC 1 cut(s) 379
AlwI GGATC 4 cut(s) 118, 321, 334, 487
AlwNI CAGNNNCTG 2 cut(s) 91, 569
Ama87I CYCGRG 1 cut(s) 321
AoxI GGCC 1 cut(s) 851
ApeKI GCWGC 1 cut(s) 549
ApoI RAATTY 4 cut(s) 35, 52, 81, 920
Asp700I GAANNNNTTC 2 cut(s) 140, 899
AspLEI GCGC 1 cut(s) 554
AsuII TTCGAA 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 321
AxyI CCTNAGG 1 cut(s) 570
BamHI GGATCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 825
BbsI GAAGAC 3 cut(s) 96, 109, 359
Bbv12I GWGCWC 2 cut(s) 825, 834
BbvI GCAGC 1 cut(s) 561
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 2 cut(s) 545, 680
BcoDI GTCTC 1 cut(s) 379
BfmI CTRYAG 1 cut(s) 661
BfrI CTTAAG 2 cut(s) 407, 890
BfuAI ACCTGC 1 cut(s) 668
BisI GCNGC 2 cut(s) 550, 851
BlsI GCNGC 2 cut(s) 551, 852
Bme1390I CCNGG 2 cut(s) 545, 680
BmeT110I CYCGRG 1 cut(s) 321
BmiI GGNNCC 3 cut(s) 328, 629, 883
BmrFI CCNGG 2 cut(s) 545, 680
BmrI ACTGGG 1 cut(s) 101
BmsI GCATC 3 cut(s) 12, 460, 748
BmuI ACTGGG 1 cut(s) 101
BpiI GAAGAC 3 cut(s) 96, 109, 359
Bpu14I TTCGAA 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 459, 865
BsaJI CCNNGG 6 cut(s) 40, 544, 598, 631, 854, 872
BsaWI WCCGGW 1 cut(s) 691
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 2 cut(s) 860, 878
Bse1I ACTGG 1 cut(s) 96
Bse21I CCTNAGG 1 cut(s) 570
BseBI CCWGG 2 cut(s) 545, 680
BseDI CCNNGG 6 cut(s) 40, 544, 598, 631, 854, 872
BseGI GGATG 4 cut(s) 131, 289, 763, 771
BseLI CCNNNNNNNGG 2 cut(s) 860, 878
BseMII CTCAG 4 cut(s) 561, 569, 723, 765
BseNI ACTGG 1 cut(s) 96
BseXI GCAGC 1 cut(s) 561
BshFI GGCC 1 cut(s) 853
BsiHKAI GWGCWC 2 cut(s) 825, 834
BsiHKCI CYCGRG 1 cut(s) 321
BsiSI CCGG 1 cut(s) 692
BslFI GGGAC 3 cut(s) 205, 455, 792
BslI CCNNNNNNNGG 2 cut(s) 860, 878
BsmAI GTCTC 1 cut(s) 379
BsmBI CGTCTC 1 cut(s) 379
BsmFI GGGAC 3 cut(s) 205, 455, 792
BsnI GGCC 1 cut(s) 853
BsoBI CYCGRG 1 cut(s) 321
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 2 cut(s) 825, 834
Bsp143I GATC 6 cut(s) 110, 326, 479, 710, 789, 802
BspACI CCGC 1 cut(s) 850
BspANI GGCC 1 cut(s) 853
BspCNI CTCAG 4 cut(s) 562, 570, 724, 764
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 3 cut(s) 328, 629, 883
BspMAI CTGCAG 1 cut(s) 665
BspMI ACCTGC 1 cut(s) 668
BspPI GGATC 4 cut(s) 118, 321, 334, 487
BspT104I TTCGAA 1 cut(s) 120
BspTI CTTAAG 2 cut(s) 407, 890
BsrI ACTGG 1 cut(s) 96
BssECI CCNNGG 6 cut(s) 40, 544, 598, 631, 854, 872
BssMI GATC 6 cut(s) 110, 326, 479, 710, 789, 802
BssT1I CCWWGG 5 cut(s) 40, 598, 631, 854, 872
Bst2UI CCWGG 2 cut(s) 545, 680
Bst4CI ACNGT 1 cut(s) 643
BstAFI CTTAAG 2 cut(s) 407, 890
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 2 cut(s) 492, 665
BstDEI CTNAG 5 cut(s) 570, 578, 732, 751, 826
BstF5I GGATG 4 cut(s) 131, 289, 763, 771
BstHHI GCGC 1 cut(s) 554
BstKTI GATC 6 cut(s) 113, 329, 482, 713, 792, 805
BstMAI GTCTC 1 cut(s) 379
BstMBI GATC 6 cut(s) 110, 326, 479, 710, 789, 802
BstMWI GCNNNNNNNGC 3 cut(s) 491, 636, 829
BstNI CCWGG 2 cut(s) 545, 680
BstNSI RCATGY 1 cut(s) 871
BstSCI CCNGG 2 cut(s) 543, 678
BstSFI CTRYAG 1 cut(s) 661
BstV1I GCAGC 1 cut(s) 561
BstV2I GAAGAC 3 cut(s) 96, 109, 359
BstX2I RGATCY 3 cut(s) 110, 326, 479
BstXI CCANNNNNNTGG 1 cut(s) 605
BstYI RGATCY 3 cut(s) 110, 326, 479
Bsu36I CCTNAGG 1 cut(s) 570
BsuRI GGCC 1 cut(s) 853
BtsCI GGATG 4 cut(s) 131, 289, 763, 771
BtsI GCAGTG 1 cut(s) 810
BtsIMutI CAGTG 2 cut(s) 759, 810
BveI ACCTGC 1 cut(s) 668
Cac8I GCNNGC 2 cut(s) 492, 665
CaiI CAGNNNCTG 2 cut(s) 91, 569
CciI TCATGA 1 cut(s) 418
CfoI GCGC 1 cut(s) 554
CseI GACGC 1 cut(s) 190
Csp6I GTAC 1 cut(s) 317
CviAII CATG 6 cut(s) 17, 173, 307, 401, 419, 868
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 5 cut(s) 570, 578, 732, 751, 826
DpnI GATC 6 cut(s) 112, 328, 481, 712, 791, 804
DpnII GATC 6 cut(s) 110, 326, 479, 710, 789, 802
DraI TTTAAA 1 cut(s) 244
DraIII CACNNNGTG 1 cut(s) 430
EaeI YGGCCR 1 cut(s) 851
Ecl136II GAGCTC 1 cut(s) 823
Eco130I CCWWGG 5 cut(s) 40, 598, 631, 854, 872
Eco24I GRGCYC 1 cut(s) 825
Eco53kI GAGCTC 1 cut(s) 823
Eco57I CTGAAG 1 cut(s) 801
Eco81I CCTNAGG 1 cut(s) 570
Eco88I CYCGRG 1 cut(s) 321
EcoICRI GAGCTC 1 cut(s) 823
EcoRI GAATTC 2 cut(s) 35, 81
EcoRII CCWGG 2 cut(s) 543, 678
EcoT14I CCWWGG 5 cut(s) 40, 598, 631, 854, 872
EcoT38I GRGCYC 1 cut(s) 825
ErhI CCWWGG 5 cut(s) 40, 598, 631, 854, 872
Esp3I CGTCTC 1 cut(s) 379
FaeI CATG 6 cut(s) 20, 176, 310, 404, 422, 871
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FaqI GGGAC 3 cut(s) 205, 455, 792
FatI CATG 6 cut(s) 16, 172, 306, 400, 418, 867
Fnu4HI GCNGC 2 cut(s) 550, 851
FokI GGATG 4 cut(s) 138, 296, 758, 770
FriOI GRGCYC 1 cut(s) 825
Fsp4HI GCNGC 2 cut(s) 550, 851
GlaI GCGC 1 cut(s) 553
GluI GCNGC 2 cut(s) 550, 851
HaeIII GGCC 1 cut(s) 853
HapII CCGG 1 cut(s) 692
HgaI GACGC 1 cut(s) 190
HhaI GCGC 1 cut(s) 554
Hin1II CATG 6 cut(s) 20, 176, 310, 404, 422, 871
Hin6I GCGC 1 cut(s) 552
HinP1I GCGC 1 cut(s) 552
HincII GTYRAC 1 cut(s) 657
HindII GTYRAC 1 cut(s) 657
HindIII AAGCTT 1 cut(s) 337
HinfI GANTC 4 cut(s) 141, 235, 433, 736
HpaI GTTAAC 1 cut(s) 657
HpaII CCGG 1 cut(s) 692
Hpy166II GTNNAC 1 cut(s) 657
Hpy188I TCNGA 6 cut(s) 252, 348, 521, 579, 820, 953
Hpy188III TCNNGA 7 cut(s) 62, 108, 419, 569, 740, 775, 844
Hpy8I GTNNAC 1 cut(s) 657
HpyAV CCTTC 2 cut(s) 116, 173
HpyCH4III ACNGT 1 cut(s) 643
HpyF10VI GCNNNNNNNGC 3 cut(s) 491, 636, 829
HpyF3I CTNAG 5 cut(s) 570, 578, 732, 751, 826
Hsp92II CATG 6 cut(s) 20, 176, 310, 404, 422, 871
HspAI GCGC 1 cut(s) 552
KspAI GTTAAC 1 cut(s) 657
Kzo9I GATC 6 cut(s) 110, 326, 479, 710, 789, 802
LmnI GCTCC 4 cut(s) 310, 571, 627, 732
Lsp1109I GCAGC 1 cut(s) 561
LweI GCATC 3 cut(s) 12, 460, 748
MalI GATC 6 cut(s) 112, 328, 481, 712, 791, 804
MboI GATC 6 cut(s) 110, 326, 479, 710, 789, 802
MboII GAAGA 5 cut(s) 96, 109, 359, 389, 407
MflI RGATCY 3 cut(s) 110, 326, 479
MhlI GDGCHC 2 cut(s) 825, 834
MluCI AATT 4 cut(s) 35, 52, 81, 920
MlyI GAGTC 1 cut(s) 244
MnlI CCTC 6 cut(s) 182, 317, 330, 565, 840, 872
MroXI GAANNNNTTC 2 cut(s) 140, 899
MseI TTAA 5 cut(s) 243, 408, 534, 656, 891
MspA1I CMGCKG 1 cut(s) 617
MspCI CTTAAG 2 cut(s) 407, 890
MspI CCGG 1 cut(s) 692
MspR9I CCNGG 2 cut(s) 545, 680
MssI GTTTAAAC 1 cut(s) 244
MvaI CCWGG 2 cut(s) 545, 680
MwoI GCNNNNNNNGC 3 cut(s) 491, 636, 829
NdeII GATC 6 cut(s) 110, 326, 479, 710, 789, 802
NlaIII CATG 6 cut(s) 20, 176, 310, 404, 422, 871
NlaIV GGNNCC 3 cut(s) 328, 629, 883
NspI RCATGY 1 cut(s) 871
NspV TTCGAA 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 321
PagI TCATGA 1 cut(s) 418
PdmI GAANNNNTTC 2 cut(s) 140, 899
PfeI GAWTC 3 cut(s) 141, 433, 736
PkrI GCNGC 2 cut(s) 551, 852
PleI GAGTC 1 cut(s) 243
PmeI GTTTAAAC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 243
Psp124BI GAGCTC 1 cut(s) 825
Psp6I CCWGG 2 cut(s) 543, 678
PspGI CCWGG 2 cut(s) 543, 678
PspN4I GGNNCC 3 cut(s) 328, 629, 883
PspXI VCTCGAGB 1 cut(s) 321
PstI CTGCAG 1 cut(s) 665
PstNI CAGNNNCTG 2 cut(s) 91, 569
PsuI RGATCY 3 cut(s) 110, 326, 479
PvuII CAGCTG 1 cut(s) 617
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
SacI GAGCTC 1 cut(s) 825
SaqAI TTAA 5 cut(s) 243, 408, 534, 656, 891
SatI GCNGC 2 cut(s) 550, 851
Sau3AI GATC 6 cut(s) 110, 326, 479, 710, 789, 802
SbfI CCTGCAGG 1 cut(s) 665
SchI GAGTC 1 cut(s) 244
ScrFI CCNGG 2 cut(s) 545, 680
SdaI CCTGCAGG 1 cut(s) 665
SduI GDGCHC 2 cut(s) 825, 834
SfaNI GCATC 3 cut(s) 12, 460, 748
SfcI CTRYAG 1 cut(s) 661
Sfr274I CTCGAG 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 120
SlaI CTCGAG 1 cut(s) 321
SmlI CTYRAG 5 cut(s) 321, 407, 474, 844, 890
SmoI CTYRAG 5 cut(s) 321, 407, 474, 844, 890
Sse8387I CCTGCAGG 1 cut(s) 665
Sse9I AATT 4 cut(s) 35, 52, 81, 920
SsiI CCGC 1 cut(s) 850
SspI AATATT 1 cut(s) 266
SstI GAGCTC 1 cut(s) 825
StyD4I CCNGG 2 cut(s) 543, 678
StyI CCWWGG 5 cut(s) 40, 598, 631, 854, 872
TaaI ACNGT 1 cut(s) 643
TaqI TCGA 3 cut(s) 120, 187, 322
TasI AATT 4 cut(s) 35, 52, 81, 920
TauI GCSGC 1 cut(s) 853
TfiI GAWTC 3 cut(s) 141, 433, 736
Tru1I TTAA 5 cut(s) 243, 408, 534, 656, 891
Tru9I TTAA 5 cut(s) 243, 408, 534, 656, 891
TscAI CASTG 2 cut(s) 759, 817
TseI GCWGC 1 cut(s) 549
TspDTI ATGAA 8 cut(s) 65, 192, 295, 300, 389, 407, 539, 760
TspGWI ACGGA 2 cut(s) 153, 874
TspRI CASTG 2 cut(s) 759, 817
Vha464I CTTAAG 2 cut(s) 407, 890
XapI RAATTY 4 cut(s) 35, 52, 81, 920
XceI RCATGY 1 cut(s) 871
XhoI CTCGAG 1 cut(s) 321
XmnI GAANNNNTTC 2 cut(s) 140, 899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.