RLG00000036819

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000243
Physical Location & Seq
Reverse (-)
85135959 .. 85145249
9291 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036819

Sequence Viewer

Length: 1932 bp
ATGGCTGATCTGAAGCCGAGCTCCAAGGGAGTGGAGCTATATTGGTTTAAGGCGGATCGGCGAGTCTGGATCTTGGATCGCGGTCGACCGGCTCTTCTCTCTGATCGCTCTTTCGGGGACGGCGGTGGGCTCCGACTTCCTTGTGTCTCTGGGTTTGCTGCATCTGGTCATCTTCTGGTGACCGAAGGCGCCTTTGCCTTATGGCCGGGGGGATCTCTCAGTGGTGGTGCTCCGATGGCAGTTGCGAAGGCGGTGCAGCATGGTTTCAAGTCTGGTCGCGATGTGGCTTTTTCTGGGGGGCTCATTGCTGGTGGAAGGAATGAGAGCGAGCCTTTTGGTTGTTTCATGTTTCTTCCCACGTCGTTCGCACTGGATGGATTAGATCTGGGTTTGGTCCGGGTCGCGGAGGATGGCGGCGATGTGGTGGCTGCTTCTTCATCTTCATCTTCTTCTGGTGGTCCTTGGAAGTATGATGTCTTCCTCAGTTTTCGAGGGGAGGACACTGGCAAAAGCTTCGTTTGCCATCTTTACAAAGCTCTGAAACAGAAAGCAATCGACACCTTCATCGATTCTGAAGAGCTCCATAAAGGCAACAACATTTCCGAGTCACTGAACGCTGTTGCCGAATCGAGAATTTCGATTGTCGTTTTATCTCAAAACTATGCCTCTTCCACATGGTGCGTAAACGAGCTCGTCAAAATCTTGGAATACAAGGGTAAGAAGAATCAGATTGTGGTGCCCATTTTCTATCAAGTAGATCCCTCCTATATTCGAAAATTGAATAACATGTTTGGGGAAGCTTTTGCCAAACATGAAGCAAATCCTAACCTCGACAGGAAAGTTTTGGAGACCTGGAAAACTGCACTAAAAAGAATCACGTATCTATGTGGCTGGAACTCGCAACATTATGAGAATGACGGAGAAATTATCGACGATATTGTGGCAGATGTGTGCAGTATACTACAAGATGTTGTGGAAATTAAAGCAGTTGAATATGTGATAACTGATGGGGTATTCCAGTGCCCTGACTTGACAAAAATTCAAGGCACATTGGCGGGGCCGAGCGGGTGTTGTACTGGGAAGCCTAAGCTTGCTGTCACTAATTGGAAGAAGGGTGATCTTCTCGGCAGCGGCTCTTTCGGGTCTGTGTATGAAGGAATTACTGATAGCGGATGCTTCATTGCTGTCAAGGAAGTTTCCTTGCTTGATCAAGGAAGGCTGGGGAGGCAAAGAGTTTTTCAACTTGAACAGGAGATTACTCTTCTGAGTCAGTTTGAACATGAGAACATAGTTCAGTATCATGGCACACAAAAGGATGAATCAAAGCTCTATATCTTTCTGGAACTTGTAACCAAAGGCTCCCTTCAAAAGCTATATCAAATGTACCCTCTTACAGATTCGCATGTCTCTGTATACACTAGGCAGATCTTGCAAGGTCTGAAGTATCTTCACGACCAAAATGTGATTCACAGGGATATTAAATGCGCAAATATTTTGGTGCATGCTAATGGATCTGTGAAGCTTGCAGACTTTGGATTGGCAAAGGCTATCAGAATGAACGACATAATATCTCGCCAAGGAACTGCAAAGTGGATGGCCCCTGAGGTTGTTAAACCTGAAAATCCAGGTTATGGCCTTCCAGCTGATATATGGAGTCTTGGATGTACTGTGTTGGAGATGTTAACTAGGATGGTTCCATACCCTAATCTCGAATGGATGGCGGCATTATGGAAAATTATGAAGGGGGAGCCCCCTCTGGTTCCTGATTCTCTTTCAAGGGAGGCACAAGATTTTATCCATCTATGCTTACAAGTTGAGCCAGATAATCGTCCCACTGCTGCTCAGCTTTTAAAACATCCATTTGTAAATAAGCCCCTTCCTCCCACGTCTTCTGGATCAGTATCTCCTTACAATCACCACAGGCAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

644

Amino Acids

70.8

Weight (kDa)

6.48

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 156 - 325 3.4e-48 TIR domain
TIR_2 PF13676 159 - 254 1.8e-15 TIR domain
Pkinase PF00069 370 - 622 1.8e-66 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 372 - 618 6.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1486
AccB1I GGYRCC 2 cut(s) 188, 736
AccB7I CCANNNNNTGG 1 cut(s) 1631
AccBSI CCGCTC 1 cut(s) 1065
AccI GTMKAC 3 cut(s) 85, 958, 1413
AccII CGCG 3 cut(s) 81, 279, 404
AclWI GGATC 7 cut(s) 63, 77, 84, 220, 752, 1519, 1903
AcoI YGGCCR 1 cut(s) 203
AcsI RAATTY 2 cut(s) 633, 1038
AcuI CTGAAG 3 cut(s) 32, 594, 1460
AcyI GRCGYC 1 cut(s) 189
AdeI CACNNNGTG 1 cut(s) 678
AfaI GTAC 3 cut(s) 1075, 1385, 1666
AfiI CCNNNNNNNGG 2 cut(s) 403, 1631
AflIII ACRYGT 1 cut(s) 786
AgsI TTSAA 9 cut(s) 268, 781, 992, 1043, 1241, 1247, 1277, 1367, 1776
AjiI CACGTC 2 cut(s) 360, 1887
AjnI CCWGG 2 cut(s) 851, 1624
AjuI GAANNNNNNNTTGG 2 cut(s) 1449, 1481
Alw21I GWGCWC 4 cut(s) 23, 232, 582, 693
Alw26I GTCTC 3 cut(s) 151, 842, 1411
AlwI GGATC 7 cut(s) 63, 77, 84, 220, 752, 1519, 1903
AoxI GGCC 4 cut(s) 203, 1058, 1596, 1633
ApeKI GCWGC 5 cut(s) 158, 256, 428, 1128, 1838
ApoI RAATTY 2 cut(s) 633, 1038
AspLEI GCGC 2 cut(s) 191, 1487
AspS9I GGNCC 4 cut(s) 394, 458, 1058, 1597
AsuC2I CCSGG 2 cut(s) 207, 398
AsuHPI GGTGA 3 cut(s) 190, 1127, 1907
AsuII TTCGAA 1 cut(s) 772
AvaII GGWCC 2 cut(s) 394, 458
AxyI CCTNAGG 1 cut(s) 1602
BaeGI GKGCMC 2 cut(s) 741, 1025
BanI GGYRCC 2 cut(s) 188, 736
BanII GRGCYC 6 cut(s) 23, 132, 303, 582, 693, 1752
BarI GAAGNNNNNNTAC 2 cut(s) 461, 493
BbsI GAAGAC 2 cut(s) 469, 1881
Bbv12I GWGCWC 4 cut(s) 23, 232, 582, 693
BbvI GCAGC 5 cut(s) 145, 268, 415, 1140, 1825
BccI CCATC 9 cut(s) 229, 368, 404, 531, 1001, 1588, 1684, 1711, 1806
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 4 cut(s) 235, 269, 496, 530
BciT130I CCWGG 2 cut(s) 853, 1626
BclI TGATCA 1 cut(s) 1207
BcnI CCSGG 2 cut(s) 207, 398
BcoDI GTCTC 3 cut(s) 151, 842, 1411
BfaI CTAG 2 cut(s) 1419, 1686
BfoI RGCGCY 1 cut(s) 192
BglII AGATCT 2 cut(s) 382, 1425
BisI GCNGC 8 cut(s) 159, 257, 415, 429, 1129, 1132, 1722, 1839
BlpI GCTNAGC 1 cut(s) 1842
BlsI GCNGC 8 cut(s) 160, 258, 416, 430, 1130, 1133, 1723, 1840
Bme1390I CCNGG 4 cut(s) 207, 398, 853, 1626
Bme18I GGWCC 2 cut(s) 394, 458
BmgBI CACGTC 2 cut(s) 360, 1887
BmgT120I GGNCC 4 cut(s) 394, 458, 1058, 1597
BmiI GGNNCC 9 cut(s) 131, 190, 738, 1059, 1360, 1599, 1695, 1749, 1761
BmrFI CCNGG 4 cut(s) 207, 398, 853, 1626
BmrI ACTGGG 1 cut(s) 1086
BmsI GCATC 2 cut(s) 170, 1163
BmuI ACTGGG 1 cut(s) 1086
BpiI GAAGAC 2 cut(s) 469, 1881
Bpu10I CCTNAGC 1 cut(s) 1086
Bpu1102I GCTNAGC 1 cut(s) 1842
Bpu14I TTCGAA 1 cut(s) 772
BpuMI CCSGG 2 cut(s) 207, 398
Bsa29I ATCGAT 1 cut(s) 567
BsaAI YACGTR 1 cut(s) 879
BsaBI GATNNNNATC 1 cut(s) 1900
BsaHI GRCGYC 1 cut(s) 189
BsaI GGTCTC 1 cut(s) 842
BsaJI CCNNGG 4 cut(s) 24, 206, 461, 1576
Bsc4I CCNNNNNNNGG 2 cut(s) 403, 1631
Bse118I RCCGGY 1 cut(s) 88
Bse1I ACTGG 4 cut(s) 375, 508, 1018, 1081
Bse21I CCTNAGG 1 cut(s) 1602
Bse3DI GCAATG 2 cut(s) 303, 1179
Bse8I GATNNNNATC 1 cut(s) 1900
BseBI CCWGG 2 cut(s) 853, 1626
BseCI ATCGAT 1 cut(s) 567
BseDI CCNNGG 4 cut(s) 24, 206, 461, 1576
BseGI GGATG 9 cut(s) 379, 415, 1178, 1321, 1599, 1667, 1695, 1722, 1855
BseJI GATNNNNATC 1 cut(s) 1900
BseLI CCNNNNNNNGG 2 cut(s) 403, 1631
BseMI GCAATG 2 cut(s) 303, 1179
BseMII CTCAG 5 cut(s) 232, 496, 1256, 1593, 1856
BseNI ACTGG 4 cut(s) 375, 508, 1018, 1081
BseSI GKGCMC 2 cut(s) 741, 1025
BseXI GCAGC 5 cut(s) 145, 268, 415, 1140, 1825
BseYI CCCAGC 1 cut(s) 1219
BsgI GTGCAG 3 cut(s) 275, 846, 973
Bsh1236I CGCG 3 cut(s) 81, 279, 404
Bsh1285I CGRYCG 2 cut(s) 85, 89
BshFI GGCC 4 cut(s) 205, 1060, 1598, 1635
BshNI GGYRCC 2 cut(s) 188, 736
BshVI ATCGAT 1 cut(s) 567
BsiEI CGRYCG 2 cut(s) 85, 89
BsiHKAI GWGCWC 4 cut(s) 23, 232, 582, 693
BsiSI CCGG 3 cut(s) 89, 206, 397
BslFI GGGAC 2 cut(s) 131, 1815
BslI CCNNNNNNNGG 2 cut(s) 403, 1631
BsmAI GTCTC 3 cut(s) 151, 842, 1411
BsmFI GGGAC 2 cut(s) 131, 1815
BsnI GGCC 4 cut(s) 205, 1060, 1598, 1635
Bso31I GGTCTC 1 cut(s) 842
Bsp119I TTCGAA 1 cut(s) 772
Bsp1286I GDGCHC 9 cut(s) 23, 132, 232, 303, 582, 693, 741, 1025, 1752
Bsp1720I GCTNAGC 1 cut(s) 1842
Bsp68I TCGCGA 1 cut(s) 279
BspANI GGCC 4 cut(s) 205, 1060, 1598, 1635
BspCNI CTCAG 5 cut(s) 231, 495, 1257, 1594, 1855
BspDI ATCGAT 1 cut(s) 567
BspFNI CGCG 3 cut(s) 81, 279, 404
BspLI GGNNCC 9 cut(s) 131, 190, 738, 1059, 1360, 1599, 1695, 1749, 1761
BspPI GGATC 7 cut(s) 63, 77, 84, 220, 752, 1519, 1903
BspQI GCTCTTC 2 cut(s) 99, 570
BspT104I TTCGAA 1 cut(s) 772
BspT107I GGYRCC 2 cut(s) 188, 736
BspTNI GGTCTC 1 cut(s) 842
BsrBI CCGCTC 1 cut(s) 1065
BsrDI GCAATG 2 cut(s) 303, 1179
BsrFI RCCGGY 1 cut(s) 88
BsrI ACTGG 4 cut(s) 375, 508, 1018, 1081
BssAI RCCGGY 1 cut(s) 88
BssECI CCNNGG 4 cut(s) 24, 206, 461, 1576
BssNAI GTATAC 2 cut(s) 959, 1414
BssNI GRCGYC 1 cut(s) 189
BssT1I CCWWGG 3 cut(s) 24, 461, 1576
Bst1107I GTATAC 2 cut(s) 959, 1414
Bst2UI CCWGG 2 cut(s) 853, 1626
Bst4CI ACNGT 1 cut(s) 1669
Bst6I CTCTTC 4 cut(s) 99, 570, 673, 1266
BstACI GRCGYC 1 cut(s) 189
BstAPI GCANNNNNTGC 1 cut(s) 1429
BstBAI YACGTR 1 cut(s) 879
BstBI TTCGAA 1 cut(s) 772
BstC8I GCNNGC 4 cut(s) 329, 1092, 1503, 1524
BstDEI CTNAG 6 cut(s) 218, 482, 1086, 1265, 1602, 1842
BstEII GGTNACC 1 cut(s) 178
BstF5I GGATG 9 cut(s) 379, 415, 1178, 1321, 1599, 1667, 1695, 1722, 1855
BstFNI CGCG 3 cut(s) 81, 279, 404
BstH2I RGCGCY 1 cut(s) 192
BstHHI GCGC 2 cut(s) 191, 1487
BstMAI GTCTC 3 cut(s) 151, 842, 1411
BstMCI CGRYCG 2 cut(s) 85, 89
BstMWI GCNNNNNNNGC 4 cut(s) 236, 519, 1225, 1429
BstNI CCWGG 2 cut(s) 853, 1626
BstNSI RCATGY 3 cut(s) 790, 1406, 1505
BstPI GGTNACC 1 cut(s) 178
BstSCI CCNGG 4 cut(s) 205, 396, 851, 1624
BstSLI GKGCMC 2 cut(s) 741, 1025
BstUI CGCG 3 cut(s) 81, 279, 404
BstV1I GCAGC 5 cut(s) 145, 268, 415, 1140, 1825
BstV2I GAAGAC 2 cut(s) 469, 1881
BstX2I RGATCY 6 cut(s) 69, 212, 382, 757, 1425, 1511
BstXI CCANNNNNNTGG 1 cut(s) 31
BstYI RGATCY 6 cut(s) 69, 212, 382, 757, 1425, 1511
BstZ17I GTATAC 2 cut(s) 959, 1414
Bsu15I ATCGAT 1 cut(s) 567
Bsu36I CCTNAGG 1 cut(s) 1602
BsuRI GGCC 4 cut(s) 205, 1060, 1598, 1635
BsuTUI ATCGAT 1 cut(s) 567
BtgZI GCGATG 2 cut(s) 294, 432
BtrI CACGTC 2 cut(s) 360, 1887
BtsCI GGATG 9 cut(s) 379, 415, 1178, 1321, 1599, 1667, 1695, 1722, 1855
BtsI GCAGTG 1 cut(s) 1833
BtsIMutI CAGTG 6 cut(s) 226, 368, 501, 608, 1025, 1833
BtuMI TCGCGA 1 cut(s) 279
Cac8I GCNNGC 4 cut(s) 329, 1092, 1503, 1524
CfoI GCGC 2 cut(s) 191, 1487
Cfr10I RCCGGY 1 cut(s) 88
Cfr13I GGNCC 4 cut(s) 394, 458, 1058, 1597
ClaI ATCGAT 1 cut(s) 567
Csp6I GTAC 3 cut(s) 1074, 1384, 1665
CviAII CATG 9 cut(s) 260, 346, 675, 787, 812, 1280, 1301, 1403, 1502
CviQI GTAC 3 cut(s) 1074, 1384, 1665
DdeI CTNAG 6 cut(s) 218, 482, 1086, 1265, 1602, 1842
DinI GGCGCC 1 cut(s) 190
DraI TTTAAA 1 cut(s) 1851
DraIII CACNNNGTG 1 cut(s) 678
EaeI YGGCCR 1 cut(s) 203
Eam1104I CTCTTC 4 cut(s) 99, 570, 673, 1266
EarI CTCTTC 4 cut(s) 99, 570, 673, 1266
EciI GGCGGA 1 cut(s) 68
Ecl136II GAGCTC 3 cut(s) 21, 580, 691
Eco130I CCWWGG 3 cut(s) 24, 461, 1576
Eco24I GRGCYC 6 cut(s) 23, 132, 303, 582, 693, 1752
Eco31I GGTCTC 1 cut(s) 842
Eco47I GGWCC 2 cut(s) 394, 458
Eco53kI GAGCTC 3 cut(s) 21, 580, 691
Eco57I CTGAAG 3 cut(s) 32, 594, 1460
Eco81I CCTNAGG 1 cut(s) 1602
Eco91I GGTNACC 1 cut(s) 178
EcoICRI GAGCTC 3 cut(s) 21, 580, 691
EcoO65I GGTNACC 1 cut(s) 178
EcoRII CCWGG 2 cut(s) 851, 1624
EcoT14I CCWWGG 3 cut(s) 24, 461, 1576
EcoT38I GRGCYC 6 cut(s) 23, 132, 303, 582, 693, 1752
EgeI GGCGCC 1 cut(s) 190
EheI GGCGCC 1 cut(s) 190
ErhI CCWWGG 3 cut(s) 24, 461, 1576
FaeI CATG 9 cut(s) 263, 349, 678, 790, 815, 1283, 1304, 1406, 1505
FalI AAGNNNNNCTT 2 cut(s) 1347, 1379
FaqI GGGAC 2 cut(s) 131, 1815
FatI CATG 9 cut(s) 259, 345, 674, 786, 811, 1279, 1300, 1402, 1501
FauI CCCGC 2 cut(s) 1048, 1058
FbaI TGATCA 1 cut(s) 1207
FblI GTMKAC 3 cut(s) 85, 958, 1413
Fnu4HI GCNGC 8 cut(s) 159, 257, 415, 429, 1129, 1132, 1722, 1839
FokI GGATG 9 cut(s) 386, 422, 1185, 1328, 1606, 1674, 1702, 1729, 1842
FriOI GRGCYC 6 cut(s) 23, 132, 303, 582, 693, 1752
Fsp4HI GCNGC 8 cut(s) 159, 257, 415, 429, 1129, 1132, 1722, 1839
FspBI CTAG 2 cut(s) 1419, 1686
FspI TGCGCA 1 cut(s) 1486
GlaI GCGC 2 cut(s) 190, 1486
GluI GCNGC 8 cut(s) 159, 257, 415, 429, 1129, 1132, 1722, 1839
GsaI CCCAGC 1 cut(s) 1223
HaeII RGCGCY 1 cut(s) 192
HaeIII GGCC 4 cut(s) 205, 1060, 1598, 1635
HapII CCGG 3 cut(s) 89, 206, 397
HhaI GCGC 2 cut(s) 191, 1487
Hin1I GRCGYC 1 cut(s) 189
Hin1II CATG 9 cut(s) 263, 349, 678, 790, 815, 1283, 1304, 1406, 1505
Hin6I GCGC 2 cut(s) 189, 1485
HinP1I GCGC 2 cut(s) 189, 1485
HincII GTYRAC 2 cut(s) 86, 1683
HindII GTYRAC 2 cut(s) 86, 1683
HindIII AAGCTT 4 cut(s) 511, 798, 1088, 1520
HpaI GTTAAC 1 cut(s) 1683
HpaII CCGG 3 cut(s) 89, 206, 397
HphI GGTGA 3 cut(s) 190, 1127, 1907
Hpy166II GTNNAC 5 cut(s) 86, 685, 959, 1414, 1683
Hpy188III TCNNGA 8 cut(s) 67, 278, 630, 1340, 1451, 1709, 1763, 1893
Hpy8I GTNNAC 5 cut(s) 86, 685, 959, 1414, 1683
Hpy99I CGWCG 2 cut(s) 364, 935
HpyCH4III ACNGT 1 cut(s) 1669
HpyCH4IV ACGT 3 cut(s) 359, 878, 1886
HpyCH4V TGCA 8 cut(s) 161, 256, 863, 954, 1432, 1501, 1526, 1586
HpyF10VI GCNNNNNNNGC 4 cut(s) 236, 519, 1225, 1429
HpyF3I CTNAG 6 cut(s) 218, 482, 1086, 1265, 1602, 1842
HpySE526I ACGT 3 cut(s) 359, 878, 1886
Hsp92I GRCGYC 1 cut(s) 189
Hsp92II CATG 9 cut(s) 263, 349, 678, 790, 815, 1283, 1304, 1406, 1505
HspAI GCGC 2 cut(s) 189, 1485
KasI GGCGCC 1 cut(s) 188
Ksp22I TGATCA 1 cut(s) 1207
KspAI GTTAAC 1 cut(s) 1683
LguI GCTCTTC 2 cut(s) 99, 570
LmnI GCTCC 7 cut(s) 26, 34, 135, 235, 585, 1364, 1747
Lsp1109I GCAGC 5 cut(s) 145, 268, 415, 1140, 1825
LweI GCATC 2 cut(s) 170, 1163
MaeI CTAG 2 cut(s) 1419, 1686
MaeII ACGT 3 cut(s) 359, 878, 1886
MaeIII GTNAC 4 cut(s) 178, 606, 1096, 1348
MbiI CCGCTC 1 cut(s) 1065
MflI RGATCY 6 cut(s) 69, 212, 382, 757, 1425, 1511
MhlI GDGCHC 9 cut(s) 23, 132, 232, 303, 582, 693, 741, 1025, 1752
MluCI AATT 8 cut(s) 633, 776, 924, 978, 1038, 1102, 1158, 1734
Mly113I GGCGCC 1 cut(s) 189
MlyI GAGTC 4 cut(s) 72, 614, 1276, 1663
MmeI TCCRAC 2 cut(s) 157, 1653
MseI TTAA 6 cut(s) 48, 981, 1479, 1611, 1682, 1850
MslI CAYNNNNRTG 1 cut(s) 1506
MspA1I CMGCKG 2 cut(s) 1131, 1643
MspI CCGG 3 cut(s) 89, 206, 397
MspR9I CCNGG 4 cut(s) 207, 398, 853, 1626
MvaI CCWGG 2 cut(s) 853, 1626
MvnI CGCG 3 cut(s) 81, 279, 404
MwoI GCNNNNNNNGC 4 cut(s) 236, 519, 1225, 1429
NarI GGCGCC 1 cut(s) 189
NciI CCSGG 2 cut(s) 207, 398
NlaIII CATG 9 cut(s) 263, 349, 678, 790, 815, 1283, 1304, 1406, 1505
NlaIV GGNNCC 9 cut(s) 131, 190, 738, 1059, 1360, 1599, 1695, 1749, 1761
NmeAIII GCCGAG 3 cut(s) 42, 1086, 1104
NmuCI GTSAC 3 cut(s) 178, 606, 1096
NruI TCGCGA 1 cut(s) 279
NsbI TGCGCA 1 cut(s) 1486
NspI RCATGY 3 cut(s) 790, 1406, 1505
NspV TTCGAA 1 cut(s) 772
PaeI GCATGC 1 cut(s) 1505
PciI ACATGT 1 cut(s) 786
PciSI GCTCTTC 2 cut(s) 99, 570
PcsI WCGNNNNNNNCGW 2 cut(s) 621, 635
PfeI GAWTC 8 cut(s) 569, 626, 724, 873, 1319, 1397, 1465, 1766
PflMI CCANNNNNTGG 1 cut(s) 1631
PkrI GCNGC 8 cut(s) 160, 258, 416, 430, 1130, 1133, 1723, 1840
PleI GAGTC 4 cut(s) 71, 613, 1275, 1662
PluTI GGCGCC 1 cut(s) 192
PpsI GAGTC 4 cut(s) 71, 613, 1275, 1662
Ppu21I YACGTR 1 cut(s) 879
PscI ACATGT 1 cut(s) 786
Psp124BI GAGCTC 3 cut(s) 23, 582, 693
Psp6I CCWGG 2 cut(s) 851, 1624
PspEI GGTNACC 1 cut(s) 178
PspFI CCCAGC 1 cut(s) 1219
PspGI CCWGG 2 cut(s) 851, 1624
PspN4I GGNNCC 9 cut(s) 131, 190, 738, 1059, 1360, 1599, 1695, 1749, 1761
PspPI GGNCC 4 cut(s) 394, 458, 1058, 1597
PsuI RGATCY 6 cut(s) 69, 212, 382, 757, 1425, 1511
PvuII CAGCTG 1 cut(s) 1643
RruI TCGCGA 1 cut(s) 279
RsaI GTAC 3 cut(s) 1075, 1385, 1666
RsaNI GTAC 3 cut(s) 1074, 1384, 1665
RseI CAYNNNNRTG 1 cut(s) 1506
SacI GAGCTC 3 cut(s) 23, 582, 693
SalI GTCGAC 1 cut(s) 84
SapI GCTCTTC 2 cut(s) 99, 570
SaqAI TTAA 6 cut(s) 48, 981, 1479, 1611, 1682, 1850
SatI GCNGC 8 cut(s) 159, 257, 415, 429, 1129, 1132, 1722, 1839
Sau96I GGNCC 4 cut(s) 394, 458, 1058, 1597
SchI GAGTC 4 cut(s) 72, 614, 1276, 1663
ScrFI CCNGG 4 cut(s) 207, 398, 853, 1626
SduI GDGCHC 9 cut(s) 23, 132, 232, 303, 582, 693, 741, 1025, 1752
SfaNI GCATC 2 cut(s) 170, 1163
SfoI GGCGCC 1 cut(s) 190
SfuI TTCGAA 1 cut(s) 772
SinI GGWCC 2 cut(s) 394, 458
SmiMI CAYNNNNRTG 1 cut(s) 1506
SphI GCATGC 1 cut(s) 1505
Sse9I AATT 8 cut(s) 633, 776, 924, 978, 1038, 1102, 1158, 1734
SspDI GGCGCC 1 cut(s) 188
SspI AATATT 1 cut(s) 1492
SspMI CTAG 2 cut(s) 1419, 1686
SstI GAGCTC 3 cut(s) 23, 582, 693
StyD4I CCNGG 4 cut(s) 205, 396, 851, 1624
StyI CCWWGG 3 cut(s) 24, 461, 1576
TaaI ACNGT 1 cut(s) 1669
TaiI ACGT 3 cut(s) 362, 881, 1889
TaqII GACCGA 1 cut(s) 197
TasI AATT 8 cut(s) 633, 776, 924, 978, 1038, 1102, 1158, 1734
TatI WGTACW 2 cut(s) 1073, 1664
TauI GCSGC 3 cut(s) 417, 1134, 1724
TfiI GAWTC 8 cut(s) 569, 626, 724, 873, 1319, 1397, 1465, 1766
Tru1I TTAA 6 cut(s) 48, 981, 1479, 1611, 1682, 1850
Tru9I TTAA 6 cut(s) 48, 981, 1479, 1611, 1682, 1850
TscAI CASTG 6 cut(s) 226, 375, 508, 615, 1025, 1840
TseFI GTSAC 3 cut(s) 178, 606, 1096
TseI GCWGC 5 cut(s) 158, 256, 428, 1128, 1838
Tsp45I GTSAC 3 cut(s) 178, 606, 1096
TspGWI ACGGA 1 cut(s) 933
TspRI CASTG 6 cut(s) 226, 375, 508, 615, 1025, 1840
Van91I CCANNNNNTGG 1 cut(s) 1631
VpaK11BI GGWCC 2 cut(s) 394, 458
XapI RAATTY 2 cut(s) 633, 1038
XceI RCATGY 3 cut(s) 790, 1406, 1505
XcmI CCANNNNNNNNNTGG 1 cut(s) 1647
XmiI GTMKAC 3 cut(s) 85, 958, 1413
XspI CTAG 2 cut(s) 1419, 1686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.