Prupe.1G505700_v2.0.a1

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000243
Physical Location & Seq
Reverse (-)
41769418 .. 41775639
6222 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G505700.2

Sequence Viewer

Length: 1128 bp
ATGAGGGTTCCGGTGGTCGACAATGGATGCTCAACTTGGGACCTTTTGAGGGACTTCGCGCCGGAAGGTGAGGGTGACTCGGTCCAGAAGAGGCTTGTGTCTTCTTGTTGTGGCGATGAAGAAGAAGGGGAGGTTGGAGAGGAGGGTGCTGTGGAGGCTGTCGTCAGAGAGACTGTGCCCCTCTCAGAAGAGTGTTCGTTTACGACGTCGACGTCGAATGATGACGACTCTTCTGGCATTATCACTGTCTCTCTGAATGAGAGGTTTTCGCCCAATGGGAGGCTTAAGCTTAAAATCACTCACTGGGAAAAGGGTGACCTTCTGGGTAGTGGGTCTTTCGGGTCTGTGTATGAAGCAATTTCTGATTGCGGATGCTTCATTGCTGTGAAGGAAGTTTCCTTGCTGGATAAAGGAAGTCAGGGGGTGCAAAGAGTTTATCAACTTGAACAGGAGATTGCTCTTTTGAGTCAGTTTGAACATCAAAACATAGTTCAATACTATGGAACCGCTAAGGATGAATCAAACCTTCATATCTTTCTGGAGCTTGTAGCTAAAGGCTCCGTCCAGAAACTCTATCAGAAGTATTGTCTTACAGATTCTCTTGTCTCTGAATACACAAGACAGATCCTGCAGGGTCTGAAGTATCTTCATGACCGAAGAGTGATTCACAGGGACATCAAATGCGCAAATATTTTGGTGCATGCAAATGGTTCTGTGAAGCTCGCAGATTTTGGATTGGCAAAGACTATCCAGATGAACGACATCATATCTTGCCAGGGGACTGCATACTGGATGGCCCCTGAGGTTGTTAATCGGAAACACCAGGGATATGGGCTTCCGGCGGATATATGGAGCCTTGGATGCACTGTATTGGAGATGTTAACCAGACGGTTTCCATACCATAATCTTGAATGGATGCAGGCATTATTTAAGATTGGAAAGGGAGAGCCCCCTCTGGTTCCCGATTCTCTTTCGAAAGATGCACAAGATTTCATCCATCGATGCCTACAAGTTAATCCAGCGAATCGTCCTACTGCTGCTCAGCTCTTAAATCATCCATTTCTTAATAGACCCCTTACGACATCTTCTGGATCAGGGTCTCCTTACCATCACCATGGGCCGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

376

Amino Acids

41.63

Weight (kDa)

5.55

Isoelectric Point (pI)

39.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 211
AatII GACGTC 2 cut(s) 209, 215
Acc16I TGCGCA 1 cut(s) 685
AccI GTMKAC 2 cut(s) 18, 209
AccII CGCG 1 cut(s) 59
AciI CCGC 3 cut(s) 369, 507, 842
AclWI GGATC 2 cut(s) 619, 1099
AcuI CTGAAG 1 cut(s) 659
AcyI GRCGYC 2 cut(s) 206, 212
AfiI CCNNNNNNNGG 2 cut(s) 49, 279
AflII CTTAAG 1 cut(s) 284
AgsI TTSAA 4 cut(s) 446, 476, 494, 911
AjnI CCWGG 2 cut(s) 774, 822
AjuI GAANNNNNNNTTGG 2 cut(s) 117, 149
AluBI AGCT 5 cut(s) 289, 544, 551, 721, 1045
AluI AGCT 5 cut(s) 289, 544, 551, 721, 1045
Alw26I GTCTC 4 cut(s) 164, 253, 610, 1104
AlwI GGATC 2 cut(s) 619, 1099
AlwNI CAGNNNCTG 2 cut(s) 628, 637
AoxI GGCC 2 cut(s) 795, 1118
ApeKI GCWGC 1 cut(s) 1037
AspLEI GCGC 2 cut(s) 61, 686
AspS9I GGNCC 4 cut(s) 40, 82, 796, 1118
AsuHPI GGTGA 4 cut(s) 80, 86, 326, 1103
AsuII TTCGAA 1 cut(s) 974
AvaII GGWCC 2 cut(s) 40, 82
AxyI CCTNAGG 1 cut(s) 801
BaeGI GKGCMC 1 cut(s) 180
BanII GRGCYC 1 cut(s) 951
BbsI GAAGAC 1 cut(s) 93
BbvI GCAGC 1 cut(s) 1024
BccI CCATC 3 cut(s) 787, 1005, 1116
BciT130I CCWGG 2 cut(s) 776, 824
BcoDI GTCTC 4 cut(s) 164, 253, 610, 1104
BfmI CTRYAG 1 cut(s) 629
BfrI CTTAAG 1 cut(s) 284
BisI GCNGC 1 cut(s) 1038
BlpI GCTNAGC 1 cut(s) 1041
BlsI GCNGC 1 cut(s) 1039
Bme1390I CCNGG 2 cut(s) 776, 824
Bme18I GGWCC 2 cut(s) 40, 82
BmgT120I GGNCC 4 cut(s) 40, 82, 796, 1118
BmiI GGNNCC 7 cut(s) 9, 41, 505, 559, 798, 854, 960
BmrFI CCNGG 2 cut(s) 776, 824
BmrI ACTGGG 1 cut(s) 313
BmsI GCATC 6 cut(s) 17, 362, 851, 906, 970, 992
BmuI ACTGGG 1 cut(s) 313
BpiI GAAGAC 1 cut(s) 93
BplI GAGNNNNNCTC 2 cut(s) 62, 94
BpmI CTGGAG 1 cut(s) 560
Bpu10I CCTNAGC 1 cut(s) 510
Bpu1102I GCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 1 cut(s) 974
Bsa29I ATCGAT 1 cut(s) 1000
BsaHI GRCGYC 2 cut(s) 206, 212
BsaI GGTCTC 1 cut(s) 1104
BsaJI CCNNGG 4 cut(s) 775, 823, 856, 1114
BsaWI WCCGGW 1 cut(s) 10
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 279
Bse1I ACTGG 2 cut(s) 308, 794
Bse21I CCTNAGG 1 cut(s) 801
Bse3DI GCAATG 1 cut(s) 378
BseBI CCWGG 2 cut(s) 776, 824
BseCI ATCGAT 1 cut(s) 1000
BseDI CCNNGG 4 cut(s) 775, 823, 856, 1114
BseGI GGATG 8 cut(s) 32, 377, 520, 798, 866, 921, 993, 1054
BseLI CCNNNNNNNGG 2 cut(s) 49, 279
BseMI GCAATG 1 cut(s) 378
BseMII CTCAG 3 cut(s) 198, 792, 1055
BseNI ACTGG 2 cut(s) 308, 794
BseRI GAGGAG 1 cut(s) 155
BseSI GKGCMC 1 cut(s) 180
BseXI GCAGC 1 cut(s) 1024
Bsh1236I CGCG 1 cut(s) 59
BshFI GGCC 2 cut(s) 797, 1120
BshVI ATCGAT 1 cut(s) 1000
BsiSI CCGG 3 cut(s) 11, 62, 839
BslFI GGGAC 4 cut(s) 53, 65, 686, 793
BslI CCNNNNNNNGG 2 cut(s) 49, 279
BsmAI GTCTC 4 cut(s) 164, 253, 610, 1104
BsmFI GGGAC 4 cut(s) 53, 65, 686, 793
BsnI GGCC 2 cut(s) 797, 1120
Bso31I GGTCTC 1 cut(s) 1104
Bsp119I TTCGAA 1 cut(s) 974
Bsp1286I GDGCHC 2 cut(s) 180, 951
Bsp143I GATC 2 cut(s) 624, 1091
Bsp1720I GCTNAGC 1 cut(s) 1041
Bsp19I CCATGG 1 cut(s) 1114
BspACI CCGC 3 cut(s) 369, 507, 842
BspANI GGCC 2 cut(s) 797, 1120
BspCNI CTCAG 3 cut(s) 197, 793, 1054
BspDI ATCGAT 1 cut(s) 1000
BspFNI CGCG 1 cut(s) 59
BspHI TCATGA 1 cut(s) 649
BspLI GGNNCC 7 cut(s) 9, 41, 505, 559, 798, 854, 960
BspMAI CTGCAG 1 cut(s) 633
BspPI GGATC 2 cut(s) 619, 1099
BspT104I TTCGAA 1 cut(s) 974
BspTI CTTAAG 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 1104
BsrDI GCAATG 1 cut(s) 378
BsrI ACTGG 2 cut(s) 308, 794
BssECI CCNNGG 4 cut(s) 775, 823, 856, 1114
BssMI GATC 2 cut(s) 624, 1091
BssNI GRCGYC 2 cut(s) 206, 212
BssT1I CCWWGG 2 cut(s) 856, 1114
Bst2UI CCWGG 2 cut(s) 776, 824
Bst4CI ACNGT 4 cut(s) 175, 247, 868, 891
Bst6I CTCTTC 4 cut(s) 83, 183, 235, 652
BstACI GRCGYC 2 cut(s) 206, 212
BstAFI CTTAAG 1 cut(s) 284
BstBI TTCGAA 1 cut(s) 974
BstC8I GCNNGC 3 cut(s) 702, 723, 921
BstDEI CTNAG 4 cut(s) 184, 510, 801, 1041
BstDSI CCRYGG 1 cut(s) 1114
BstEII GGTNACC 1 cut(s) 314
BstF5I GGATG 8 cut(s) 32, 377, 520, 798, 866, 921, 993, 1054
BstFNI CGCG 1 cut(s) 59
BstHHI GCGC 2 cut(s) 61, 686
BstKTI GATC 2 cut(s) 627, 1094
BstMAI GTCTC 4 cut(s) 164, 253, 610, 1104
BstMBI GATC 2 cut(s) 624, 1091
BstMWI GCNNNNNNNGC 2 cut(s) 155, 861
BstNI CCWGG 2 cut(s) 776, 824
BstNSI RCATGY 1 cut(s) 704
BstPI GGTNACC 1 cut(s) 314
BstSCI CCNGG 2 cut(s) 774, 822
BstSFI CTRYAG 1 cut(s) 629
BstSLI GKGCMC 1 cut(s) 180
BstUI CGCG 1 cut(s) 59
BstV1I GCAGC 1 cut(s) 1024
BstV2I GAAGAC 1 cut(s) 93
BstX2I RGATCY 1 cut(s) 624
BstXI CCANNNNNNTGG 2 cut(s) 830, 1115
BstYI RGATCY 1 cut(s) 624
Bsu15I ATCGAT 1 cut(s) 1000
Bsu36I CCTNAGG 1 cut(s) 801
BsuRI GGCC 2 cut(s) 797, 1120
BsuTUI ATCGAT 1 cut(s) 1000
BtgI CCRYGG 1 cut(s) 1114
BtgZI GCGATG 1 cut(s) 129
BtsCI GGATG 8 cut(s) 32, 377, 520, 798, 866, 921, 993, 1054
BtsIMutI CAGTG 3 cut(s) 243, 301, 864
Cac8I GCNNGC 3 cut(s) 702, 723, 921
CaiI CAGNNNCTG 2 cut(s) 628, 637
CciI TCATGA 1 cut(s) 649
CfoI GCGC 2 cut(s) 61, 686
Cfr13I GGNCC 4 cut(s) 40, 82, 796, 1118
ClaI ATCGAT 1 cut(s) 1000
CviAII CATG 3 cut(s) 650, 701, 1115
DdeI CTNAG 4 cut(s) 184, 510, 801, 1041
DpnI GATC 2 cut(s) 626, 1093
DpnII GATC 2 cut(s) 624, 1091
DrdI GACNNNNNNGTC 1 cut(s) 211
DseDI GACNNNNNNGTC 1 cut(s) 211
Eam1104I CTCTTC 4 cut(s) 83, 183, 235, 652
EarI CTCTTC 4 cut(s) 83, 183, 235, 652
EciI GGCGGA 1 cut(s) 857
Eco130I CCWWGG 2 cut(s) 856, 1114
Eco24I GRGCYC 1 cut(s) 951
Eco31I GGTCTC 1 cut(s) 1104
Eco47I GGWCC 2 cut(s) 40, 82
Eco57I CTGAAG 1 cut(s) 659
Eco81I CCTNAGG 1 cut(s) 801
Eco91I GGTNACC 1 cut(s) 314
EcoO109I RGGNCCY 1 cut(s) 40
EcoO65I GGTNACC 1 cut(s) 314
EcoRII CCWGG 2 cut(s) 774, 822
EcoT14I CCWWGG 2 cut(s) 856, 1114
EcoT38I GRGCYC 1 cut(s) 951
ErhI CCWWGG 2 cut(s) 856, 1114
FaeI CATG 3 cut(s) 653, 704, 1118
FaqI GGGAC 4 cut(s) 53, 65, 686, 793
FatI CATG 3 cut(s) 649, 700, 1114
FblI GTMKAC 2 cut(s) 18, 209
Fnu4HI GCNGC 1 cut(s) 1038
FokI GGATG 8 cut(s) 39, 384, 527, 805, 873, 928, 980, 1041
FriOI GRGCYC 1 cut(s) 951
Fsp4HI GCNGC 1 cut(s) 1038
FspI TGCGCA 1 cut(s) 685
GlaI GCGC 2 cut(s) 60, 685
GluI GCNGC 1 cut(s) 1038
GsuI CTGGAG 1 cut(s) 560
HaeIII GGCC 2 cut(s) 797, 1120
HapII CCGG 3 cut(s) 11, 62, 839
HhaI GCGC 2 cut(s) 61, 686
Hin1I GRCGYC 2 cut(s) 206, 212
Hin1II CATG 3 cut(s) 653, 704, 1118
Hin6I GCGC 2 cut(s) 59, 684
HinP1I GCGC 2 cut(s) 59, 684
HincII GTYRAC 3 cut(s) 19, 210, 882
HindII GTYRAC 3 cut(s) 19, 210, 882
HindIII AAGCTT 1 cut(s) 287
HinfI GANTC 8 cut(s) 77, 227, 466, 518, 596, 664, 965, 1024
HpaI GTTAAC 1 cut(s) 882
HpaII CCGG 3 cut(s) 11, 62, 839
HphI GGTGA 4 cut(s) 80, 86, 326, 1103
Hpy166II GTNNAC 4 cut(s) 19, 201, 210, 882
Hpy188I TCNGA 8 cut(s) 167, 187, 255, 364, 579, 610, 639, 816
Hpy188III TCNNGA 8 cut(s) 85, 539, 565, 650, 751, 908, 962, 1089
Hpy8I GTNNAC 4 cut(s) 19, 201, 210, 882
Hpy99I CGWCG 4 cut(s) 208, 211, 214, 217
HpyAV CCTTC 5 cut(s) 59, 119, 329, 382, 536
HpyCH4III ACNGT 4 cut(s) 175, 247, 868, 891
HpyCH4IV ACGT 2 cut(s) 206, 212
HpyCH4V TGCA 8 cut(s) 427, 631, 700, 704, 785, 864, 919, 983
HpyF10VI GCNNNNNNNGC 2 cut(s) 155, 861
HpyF3I CTNAG 4 cut(s) 184, 510, 801, 1041
HpySE526I ACGT 2 cut(s) 206, 212
Hsp92I GRCGYC 2 cut(s) 206, 212
Hsp92II CATG 3 cut(s) 653, 704, 1118
HspAI GCGC 2 cut(s) 59, 684
KspAI GTTAAC 1 cut(s) 882
Kzo9I GATC 2 cut(s) 624, 1091
LmnI GCTCC 3 cut(s) 541, 563, 852
Lsp1109I GCAGC 1 cut(s) 1024
LweI GCATC 6 cut(s) 17, 362, 851, 906, 970, 992
MaeII ACGT 2 cut(s) 206, 212
MaeIII GTNAC 2 cut(s) 74, 314
MalI GATC 2 cut(s) 626, 1093
MboI GATC 2 cut(s) 624, 1091
MboII GAAGA 9 cut(s) 93, 100, 131, 134, 200, 222, 638, 669, 1077
MflI RGATCY 1 cut(s) 624
MhlI GDGCHC 2 cut(s) 180, 951
MluCI AATT 1 cut(s) 357
MlyI GAGTC 3 cut(s) 71, 221, 475
MmeI TCCRAC 1 cut(s) 115
MseI TTAA 8 cut(s) 285, 291, 810, 881, 930, 1014, 1049, 1065
MslI CAYNNNNRTG 3 cut(s) 383, 705, 1113
MspCI CTTAAG 1 cut(s) 284
MspI CCGG 3 cut(s) 11, 62, 839
MspR9I CCNGG 2 cut(s) 776, 824
MvaI CCWGG 2 cut(s) 776, 824
MvnI CGCG 1 cut(s) 59
MwoI GCNNNNNNNGC 2 cut(s) 155, 861
NcoI CCATGG 1 cut(s) 1114
NdeII GATC 2 cut(s) 624, 1091
NlaIII CATG 3 cut(s) 653, 704, 1118
NlaIV GGNNCC 7 cut(s) 9, 41, 505, 559, 798, 854, 960
NmuCI GTSAC 2 cut(s) 74, 314
NsbI TGCGCA 1 cut(s) 685
NspI RCATGY 1 cut(s) 704
NspV TTCGAA 1 cut(s) 974
PaeI GCATGC 1 cut(s) 704
PagI TCATGA 1 cut(s) 649
PcsI WCGNNNNNNNCGW 3 cut(s) 203, 209, 212
PfeI GAWTC 5 cut(s) 518, 596, 664, 965, 1024
PflFI GACNNNGTC 1 cut(s) 80
PkrI GCNGC 1 cut(s) 1039
PleI GAGTC 3 cut(s) 71, 221, 474
PpsI GAGTC 3 cut(s) 71, 221, 474
PpuMI RGGWCCY 1 cut(s) 40
Psp5II RGGWCCY 1 cut(s) 40
Psp6I CCWGG 2 cut(s) 774, 822
PspEI GGTNACC 1 cut(s) 314
PspGI CCWGG 2 cut(s) 774, 822
PspN4I GGNNCC 7 cut(s) 9, 41, 505, 559, 798, 854, 960
PspPI GGNCC 4 cut(s) 40, 82, 796, 1118
PspPPI RGGWCCY 1 cut(s) 40
PstI CTGCAG 1 cut(s) 633
PstNI CAGNNNCTG 2 cut(s) 628, 637
PsuI RGATCY 1 cut(s) 624
PsyI GACNNNGTC 1 cut(s) 80
RseI CAYNNNNRTG 3 cut(s) 383, 705, 1113
SalI GTCGAC 2 cut(s) 17, 208
SaqAI TTAA 8 cut(s) 285, 291, 810, 881, 930, 1014, 1049, 1065
SatI GCNGC 1 cut(s) 1038
Sau3AI GATC 2 cut(s) 624, 1091
Sau96I GGNCC 4 cut(s) 40, 82, 796, 1118
SbfI CCTGCAGG 1 cut(s) 633
SchI GAGTC 3 cut(s) 71, 221, 475
ScrFI CCNGG 2 cut(s) 776, 824
SdaI CCTGCAGG 1 cut(s) 633
SduI GDGCHC 2 cut(s) 180, 951
SfaNI GCATC 6 cut(s) 17, 362, 851, 906, 970, 992
SfcI CTRYAG 1 cut(s) 629
SfuI TTCGAA 1 cut(s) 974
SgrDI CGTCGACG 1 cut(s) 208
SinI GGWCC 2 cut(s) 40, 82
SmiMI CAYNNNNRTG 3 cut(s) 383, 705, 1113
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
SphI GCATGC 1 cut(s) 704
Sse8387I CCTGCAGG 1 cut(s) 633
Sse9I AATT 1 cut(s) 357
SsiI CCGC 3 cut(s) 369, 507, 842
SspI AATATT 1 cut(s) 691
StyD4I CCNGG 2 cut(s) 774, 822
StyI CCWWGG 2 cut(s) 856, 1114
TaaI ACNGT 4 cut(s) 175, 247, 868, 891
TaiI ACGT 2 cut(s) 209, 215
TaqI TCGA 5 cut(s) 18, 209, 215, 974, 1000
TaqII GACCGA 2 cut(s) 70, 669
TasI AATT 1 cut(s) 357
TfiI GAWTC 5 cut(s) 518, 596, 664, 965, 1024
Tru1I TTAA 8 cut(s) 285, 291, 810, 881, 930, 1014, 1049, 1065
Tru9I TTAA 8 cut(s) 285, 291, 810, 881, 930, 1014, 1049, 1065
TscAI CASTG 3 cut(s) 250, 308, 871
TseFI GTSAC 2 cut(s) 74, 314
TseI GCWGC 1 cut(s) 1037
Tsp45I GTSAC 2 cut(s) 74, 314
TspDTI ATGAA 8 cut(s) 132, 366, 367, 518, 531, 638, 770, 982
TspGWI ACGGA 1 cut(s) 550
TspRI CASTG 3 cut(s) 250, 308, 871
Tth111I GACNNNGTC 1 cut(s) 80
Vha464I CTTAAG 1 cut(s) 284
VpaK11BI GGWCC 2 cut(s) 40, 82
XceI RCATGY 1 cut(s) 704
XmiI GTMKAC 2 cut(s) 18, 209
ZraI GACGTC 2 cut(s) 207, 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.