Rmu_sc0007806.1_g000004

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007806.1
OG0000243
Physical Location & Seq
Reverse (-)
9792 .. 15380
5589 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007806.1_g000004.1.cds

Sequence Viewer

Length: 1488 bp
atggcctcgatccctcgaaaaactgatgcgtctcttccttcatcagctgaaccatcatcagcagctggttggtggaagtatgacgtgtatttgagtttcaggggtgaagattctcgaaatggttttacatcccatttatatcatcggctgcaaaagagaggaatcaatgcattcatggatgacttagatcttgcagcaggacatgctattggtcaggctctttttggggcacttgaaggatcaaggttcgcaattgttgttctgtcccgaacttacgctttttcttcttggtgtttggaggaacttacaaagatttgtcagatcatggaggacggctccagaattcttccagttttttatgatgtcgagcctactaatgttagatatcaaagggggcattttgcatatgctttcaccaggcatgaagtgtctgggcgattcgaaccggagaaggtccgggagtggagagatgctttaagaagaattgccgatatttctgggtgggagacaaaaaattacgaggataagtcagaacttatcgaagccattgtggaatctgtgtacagtaaactacaatctgttgtggtattccagtgccctgacttgacaaaaattcaaggcacaacattggcggggaagcctaagcttactgtcactaattgggaaaagggtgttcatctcggcagcggcgcttttgggtctgtgtatgaaggaattactgatgacggatgcttctttgctgtcaaggaagtttccttgcttgatcaaggaagcctggggaggcaaagagtttctcaacttgaacaggagattgctcatctgagtcaatgtaaacatgagaacatagtgcagtattatggcacacaaaaggatgaatcaaagttctgtatctttctggaacttgtaaccaaaggctcccttcaaaagctatatcaaacgtacactcttacagattcgcatgtctctggatacaccggacagatcttgcaaggtctgaagtatcttcacggtcgaaatgtgattcacagggacattaaatgcgcaaatattttggtgcatgctaatggatctgtgaagcttgcagactttggattggcaaagactatcacaacgaacgacataaaatcttgccgaggaactccatactggatggcgcctgaggttgttaaccctgaaagtccaggttatggccttccagctgatatatggagtcttggatgtactgtgttggagatgttaactagggaggttccataccctaatcttgaatggatggcggcagcatgtaaaattatgatggggaagctccctctggttcctgattctctttcaagagaggcacaagattttatccatcaatgcttacaagttaagccagataatcgtcccactgctgctcagcttttagaacatccgtttgtaaataagccccttcctcccacgtcttctggatcagtatctccttacaatcaccacaggcagagttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

495

Amino Acids

55.44

Weight (kDa)

6.6

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1042
AccB1I GGYRCC 1 cut(s) 1153
AccB7I CCANNNNNTGG 1 cut(s) 1187
AciI CCGC 3 cut(s) 632, 687, 1277
AclWI GGATC 4 cut(s) 4, 247, 1075, 1459
AcsI RAATTY 2 cut(s) 342, 612
AcuI CTGAAG 1 cut(s) 1016
AcyI GRCGYC 1 cut(s) 1154
AfaI GTAC 3 cut(s) 563, 941, 1222
AfiI CCNNNNNNNGG 1 cut(s) 1187
AflIII ACRYGT 1 cut(s) 84
AgsI TTSAA 6 cut(s) 236, 617, 803, 923, 1268, 1332
AjiI CACGTC 2 cut(s) 85, 1443
AjnI CCWGG 3 cut(s) 416, 774, 1180
AluBI AGCT 8 cut(s) 47, 65, 646, 928, 1078, 1199, 1306, 1402
AluI AGCT 8 cut(s) 47, 65, 646, 928, 1078, 1199, 1306, 1402
Alw26I GTCTC 3 cut(s) 36, 500, 967
AlwI GGATC 4 cut(s) 4, 247, 1075, 1459
AlwNI CAGNNNCTG 1 cut(s) 65
AoxI GGCC 2 cut(s) 3, 1189
ApeKI GCWGC 6 cut(s) 62, 148, 194, 684, 1280, 1394
ApoI RAATTY 2 cut(s) 342, 612
AspLEI GCGC 3 cut(s) 692, 1043, 1156
AspS9I GGNCC 1 cut(s) 454
AsuC2I CCSGG 1 cut(s) 458
AsuHPI GGTGA 3 cut(s) 116, 406, 1463
AsuII TTCGAA 1 cut(s) 441
AvaII GGWCC 1 cut(s) 454
AxyI CCTNAGG 1 cut(s) 1158
BaeGI GKGCMC 2 cut(s) 232, 599
BanI GGYRCC 1 cut(s) 1153
BbsI GAAGAC 1 cut(s) 1437
BbvI GCAGC 6 cut(s) 74, 135, 206, 696, 1292, 1381
BccI CCATC 5 cut(s) 61, 1144, 1267, 1291, 1362
BceAI ACGGC 1 cut(s) 349
BciT130I CCWGG 3 cut(s) 418, 776, 1182
BciVI GTATCC 1 cut(s) 962
BclI TGATCA 1 cut(s) 763
BcnI CCSGG 1 cut(s) 458
BcoDI GTCTC 3 cut(s) 36, 500, 967
BfaI CTAG 1 cut(s) 1242
BfoI RGCGCY 2 cut(s) 693, 1157
BfuI GTATCC 1 cut(s) 962
BglII AGATCT 2 cut(s) 187, 981
BisI GCNGC 8 cut(s) 63, 149, 195, 685, 688, 1278, 1281, 1395
BlpI GCTNAGC 1 cut(s) 1398
BlsI GCNGC 8 cut(s) 64, 150, 196, 686, 689, 1279, 1282, 1396
Bme1390I CCNGG 4 cut(s) 418, 458, 776, 1182
Bme18I GGWCC 1 cut(s) 454
BmgBI CACGTC 2 cut(s) 85, 1443
BmgT120I GGNCC 1 cut(s) 454
BmiI GGNNCC 5 cut(s) 337, 916, 1155, 1251, 1317
BmrFI CCNGG 4 cut(s) 418, 458, 776, 1182
BmsI GCATC 3 cut(s) 16, 460, 719
BpiI GAAGAC 1 cut(s) 1437
BplI GAGNNNNNCTC 2 cut(s) 320, 352
BpmI CTGGAG 1 cut(s) 322
Bpu10I CCTNAGC 1 cut(s) 642
Bpu1102I GCTNAGC 1 cut(s) 1398
Bpu14I TTCGAA 1 cut(s) 441
BpuMI CCSGG 1 cut(s) 458
BsaBI GATNNNNATC 1 cut(s) 1456
BsaHI GRCGYC 1 cut(s) 1154
BsaJI CCNNGG 2 cut(s) 775, 1132
BsaWI WCCGGW 2 cut(s) 445, 974
Bsc4I CCNNNNNNNGG 1 cut(s) 1187
Bse1I ACTGG 3 cut(s) 350, 592, 1151
Bse21I CCTNAGG 1 cut(s) 1158
Bse8I GATNNNNATC 1 cut(s) 1456
BseBI CCWGG 3 cut(s) 418, 776, 1182
BseDI CCNNGG 2 cut(s) 775, 1132
BseGI GGATG 8 cut(s) 128, 184, 734, 877, 1155, 1223, 1278, 1411
BseJI GATNNNNATC 1 cut(s) 1456
BseLI CCNNNNNNNGG 1 cut(s) 1187
BseMII CTCAG 3 cut(s) 812, 1149, 1412
BseNI ACTGG 3 cut(s) 350, 592, 1151
BseSI GKGCMC 2 cut(s) 232, 599
BseXI GCAGC 6 cut(s) 74, 135, 206, 696, 1292, 1381
BsgI GTGCAG 1 cut(s) 869
Bsh1285I CGRYCG 1 cut(s) 1012
BshFI GGCC 2 cut(s) 5, 1191
BshNI GGYRCC 1 cut(s) 1153
BsiEI CGRYCG 1 cut(s) 1012
BsiSI CCGG 3 cut(s) 446, 457, 975
BslFI GGGAC 3 cut(s) 250, 1043, 1371
BslI CCNNNNNNNGG 1 cut(s) 1187
BsmAI GTCTC 3 cut(s) 36, 500, 967
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 3 cut(s) 250, 1043, 1371
BsmI GAATGC 1 cut(s) 170
BsnI GGCC 2 cut(s) 5, 1191
Bsp119I TTCGAA 1 cut(s) 441
Bsp1286I GDGCHC 2 cut(s) 232, 599
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
Bsp1720I GCTNAGC 1 cut(s) 1398
BspACI CCGC 3 cut(s) 632, 687, 1277
BspANI GGCC 2 cut(s) 5, 1191
BspCNI CTCAG 3 cut(s) 813, 1150, 1411
BspLI GGNNCC 5 cut(s) 337, 916, 1155, 1251, 1317
BspPI GGATC 4 cut(s) 4, 247, 1075, 1459
BspT104I TTCGAA 1 cut(s) 441
BspT107I GGYRCC 1 cut(s) 1153
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 3 cut(s) 350, 592, 1151
BssECI CCNNGG 2 cut(s) 775, 1132
BssMI GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
BssNI GRCGYC 1 cut(s) 1154
Bst2UI CCWGG 3 cut(s) 418, 776, 1182
Bst4CI ACNGT 4 cut(s) 566, 652, 1010, 1225
Bst6I CTCTTC 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 1154
BstAPI GCANNNNNTGC 1 cut(s) 203
BstAUI TGTACA 1 cut(s) 561
BstBI TTCGAA 1 cut(s) 441
BstC8I GCNNGC 2 cut(s) 1059, 1080
BstDEI CTNAG 5 cut(s) 184, 642, 821, 1158, 1398
BstF5I GGATG 8 cut(s) 128, 184, 734, 877, 1155, 1223, 1278, 1411
BstH2I RGCGCY 2 cut(s) 693, 1157
BstHHI GCGC 3 cut(s) 692, 1043, 1156
BstKTI GATC 8 cut(s) 12, 190, 242, 324, 766, 984, 1070, 1454
BstMAI GTCTC 3 cut(s) 36, 500, 967
BstMBI GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
BstMCI CGRYCG 1 cut(s) 1012
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstNI CCWGG 3 cut(s) 418, 776, 1182
BstNSI RCATGY 4 cut(s) 206, 962, 1061, 1287
BstSCI CCNGG 4 cut(s) 416, 456, 774, 1180
BstSLI GKGCMC 2 cut(s) 232, 599
BstV1I GCAGC 6 cut(s) 74, 135, 206, 696, 1292, 1381
BstV2I GAAGAC 1 cut(s) 1437
BstX2I RGATCY 3 cut(s) 187, 981, 1067
BstYI RGATCY 3 cut(s) 187, 981, 1067
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 1 cut(s) 962
BsuRI GGCC 2 cut(s) 5, 1191
BtrI CACGTC 2 cut(s) 85, 1443
BtsCI GGATG 8 cut(s) 128, 184, 734, 877, 1155, 1223, 1278, 1411
BtsI GCAGTG 1 cut(s) 1389
BtsIMutI CAGTG 2 cut(s) 599, 1389
Cac8I GCNNGC 2 cut(s) 1059, 1080
CaiI CAGNNNCTG 1 cut(s) 65
CfoI GCGC 3 cut(s) 692, 1043, 1156
Cfr13I GGNCC 1 cut(s) 454
CseI GACGC 1 cut(s) 18
Csp6I GTAC 3 cut(s) 562, 940, 1221
CviAII CATG 8 cut(s) 175, 203, 325, 422, 836, 959, 1058, 1284
CviQI GTAC 3 cut(s) 562, 940, 1221
DdeI CTNAG 5 cut(s) 184, 642, 821, 1158, 1398
DinI GGCGCC 1 cut(s) 1155
DpnI GATC 8 cut(s) 11, 189, 241, 323, 765, 983, 1069, 1453
DpnII GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco32I GATATC 1 cut(s) 386
Eco47I GGWCC 1 cut(s) 454
Eco57I CTGAAG 1 cut(s) 1016
Eco81I CCTNAGG 1 cut(s) 1158
EcoRI GAATTC 1 cut(s) 342
EcoRII CCWGG 3 cut(s) 416, 774, 1180
EcoRV GATATC 1 cut(s) 386
EcoT22I ATGCAT 1 cut(s) 172
EgeI GGCGCC 1 cut(s) 1155
EheI GGCGCC 1 cut(s) 1155
Esp3I CGTCTC 1 cut(s) 36
FaeI CATG 8 cut(s) 178, 206, 328, 425, 839, 962, 1061, 1287
FalI AAGNNNNNCTT 2 cut(s) 903, 935
FaqI GGGAC 3 cut(s) 250, 1043, 1371
FatI CATG 8 cut(s) 174, 202, 324, 421, 835, 958, 1057, 1283
FauI CCCGC 1 cut(s) 625
FauNDI CATATG 1 cut(s) 406
FbaI TGATCA 1 cut(s) 763
Fnu4HI GCNGC 8 cut(s) 63, 149, 195, 685, 688, 1278, 1281, 1395
FokI GGATG 8 cut(s) 115, 191, 741, 884, 1162, 1230, 1285, 1398
Fsp4HI GCNGC 8 cut(s) 63, 149, 195, 685, 688, 1278, 1281, 1395
FspBI CTAG 1 cut(s) 1242
FspI TGCGCA 1 cut(s) 1042
GlaI GCGC 3 cut(s) 691, 1042, 1155
GluI GCNGC 8 cut(s) 63, 149, 195, 685, 688, 1278, 1281, 1395
GsuI CTGGAG 1 cut(s) 322
HaeII RGCGCY 2 cut(s) 693, 1157
HaeIII GGCC 2 cut(s) 5, 1191
HapII CCGG 3 cut(s) 446, 457, 975
HgaI GACGC 1 cut(s) 18
HhaI GCGC 3 cut(s) 692, 1043, 1156
Hin1I GRCGYC 1 cut(s) 1154
Hin1II CATG 8 cut(s) 178, 206, 328, 425, 839, 962, 1061, 1287
Hin6I GCGC 3 cut(s) 690, 1041, 1154
HinP1I GCGC 3 cut(s) 690, 1041, 1154
HincII GTYRAC 2 cut(s) 1168, 1239
HindII GTYRAC 2 cut(s) 1168, 1239
HindIII AAGCTT 2 cut(s) 644, 1076
HpaI GTTAAC 2 cut(s) 1168, 1239
HpaII CCGG 3 cut(s) 446, 457, 975
HphI GGTGA 3 cut(s) 116, 406, 1463
Hpy166II GTNNAC 6 cut(s) 562, 569, 833, 942, 1168, 1239
Hpy188I TCNGA 4 cut(s) 321, 532, 822, 996
Hpy188III TCNNGA 9 cut(s) 114, 267, 339, 896, 966, 1265, 1319, 1332, 1449
Hpy8I GTNNAC 6 cut(s) 562, 569, 833, 942, 1168, 1239
HpyAV CCTTC 7 cut(s) 48, 230, 445, 704, 929, 1202, 1442
HpyCH4III ACNGT 4 cut(s) 566, 652, 1010, 1225
HpyCH4IV ACGT 3 cut(s) 84, 938, 1442
HpyCH4V TGCA 8 cut(s) 151, 170, 194, 404, 850, 988, 1057, 1082
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
HpyF3I CTNAG 5 cut(s) 184, 642, 821, 1158, 1398
HpySE526I ACGT 3 cut(s) 84, 938, 1442
Hsp92I GRCGYC 1 cut(s) 1154
Hsp92II CATG 8 cut(s) 178, 206, 328, 425, 839, 962, 1061, 1287
HspAI GCGC 3 cut(s) 690, 1041, 1154
KasI GGCGCC 1 cut(s) 1153
Ksp22I TGATCA 1 cut(s) 763
KspAI GTTAAC 2 cut(s) 1168, 1239
Kzo9I GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
LmnI GCTCC 3 cut(s) 341, 920, 1311
Lsp1109I GCAGC 6 cut(s) 74, 135, 206, 696, 1292, 1381
LweI GCATC 3 cut(s) 16, 460, 719
MaeI CTAG 1 cut(s) 1242
MaeII ACGT 3 cut(s) 84, 938, 1442
MaeIII GTNAC 2 cut(s) 652, 904
MalI GATC 8 cut(s) 11, 189, 241, 323, 765, 983, 1069, 1453
MboI GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
MboII GAAGA 7 cut(s) 26, 119, 276, 338, 492, 995, 1437
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 3 cut(s) 187, 981, 1067
MhlI GDGCHC 2 cut(s) 232, 599
MluCI AATT 8 cut(s) 252, 342, 483, 514, 612, 658, 714, 1290
Mly113I GGCGCC 1 cut(s) 1154
MlyI GAGTC 2 cut(s) 832, 1219
MmeI TCCRAC 1 cut(s) 1209
Mph1103I ATGCAT 1 cut(s) 172
MseI TTAA 5 cut(s) 476, 1035, 1167, 1238, 1371
MslI CAYNNNNRTG 1 cut(s) 1062
MspA1I CMGCKG 4 cut(s) 47, 65, 687, 1199
MspI CCGG 3 cut(s) 446, 457, 975
MspR9I CCNGG 4 cut(s) 418, 458, 776, 1182
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 170
MvaI CCWGG 3 cut(s) 418, 776, 1182
MwoI GCNNNNNNNGC 1 cut(s) 203
NarI GGCGCC 1 cut(s) 1154
NciI CCSGG 1 cut(s) 458
NdeI CATATG 1 cut(s) 406
NdeII GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
NlaIII CATG 8 cut(s) 178, 206, 328, 425, 839, 962, 1061, 1287
NlaIV GGNNCC 5 cut(s) 337, 916, 1155, 1251, 1317
NmeAIII GCCGAG 2 cut(s) 660, 1157
NmuCI GTSAC 1 cut(s) 652
NsbI TGCGCA 1 cut(s) 1042
NsiI ATGCAT 1 cut(s) 172
NspI RCATGY 4 cut(s) 206, 962, 1061, 1287
NspV TTCGAA 1 cut(s) 441
PaeI GCATGC 1 cut(s) 1061
PctI GAATGC 1 cut(s) 170
PfeI GAWTC 8 cut(s) 110, 162, 438, 554, 875, 953, 1021, 1322
PflMI CCANNNNNTGG 1 cut(s) 1187
PfoI TCCNGGA 1 cut(s) 456
PkrI GCNGC 8 cut(s) 64, 150, 196, 686, 689, 1279, 1282, 1396
PleI GAGTC 2 cut(s) 831, 1218
PluTI GGCGCC 1 cut(s) 1157
PpsI GAGTC 2 cut(s) 831, 1218
Psp6I CCWGG 3 cut(s) 416, 774, 1180
PspGI CCWGG 3 cut(s) 416, 774, 1180
PspN4I GGNNCC 5 cut(s) 337, 916, 1155, 1251, 1317
PspPI GGNCC 1 cut(s) 454
PstNI CAGNNNCTG 1 cut(s) 65
PsuI RGATCY 3 cut(s) 187, 981, 1067
PvuII CAGCTG 3 cut(s) 47, 65, 1199
RsaI GTAC 3 cut(s) 563, 941, 1222
RsaNI GTAC 3 cut(s) 562, 940, 1221
RseI CAYNNNNRTG 1 cut(s) 1062
SaqAI TTAA 5 cut(s) 476, 1035, 1167, 1238, 1371
SatI GCNGC 8 cut(s) 63, 149, 195, 685, 688, 1278, 1281, 1395
Sau3AI GATC 8 cut(s) 9, 187, 239, 321, 763, 981, 1067, 1451
Sau96I GGNCC 1 cut(s) 454
SchI GAGTC 2 cut(s) 832, 1219
ScrFI CCNGG 4 cut(s) 418, 458, 776, 1182
SduI GDGCHC 2 cut(s) 232, 599
SfaNI GCATC 3 cut(s) 16, 460, 719
SfoI GGCGCC 1 cut(s) 1155
SfuI TTCGAA 1 cut(s) 441
SinI GGWCC 1 cut(s) 454
SmiMI CAYNNNNRTG 1 cut(s) 1062
SphI GCATGC 1 cut(s) 1061
Sse9I AATT 8 cut(s) 252, 342, 483, 514, 612, 658, 714, 1290
SsiI CCGC 3 cut(s) 632, 687, 1277
SspDI GGCGCC 1 cut(s) 1153
SspI AATATT 1 cut(s) 1048
SspMI CTAG 1 cut(s) 1242
StyD4I CCNGG 4 cut(s) 416, 456, 774, 1180
TaaI ACNGT 4 cut(s) 566, 652, 1010, 1225
TaiI ACGT 3 cut(s) 87, 941, 1445
TaqI TCGA 7 cut(s) 8, 16, 115, 366, 441, 540, 1012
TasI AATT 8 cut(s) 252, 342, 483, 514, 612, 658, 714, 1290
TatI WGTACW 2 cut(s) 561, 1220
TauI GCSGC 2 cut(s) 690, 1280
TfiI GAWTC 8 cut(s) 110, 162, 438, 554, 875, 953, 1021, 1322
Tru1I TTAA 5 cut(s) 476, 1035, 1167, 1238, 1371
Tru9I TTAA 5 cut(s) 476, 1035, 1167, 1238, 1371
TscAI CASTG 2 cut(s) 599, 1396
TseFI GTSAC 1 cut(s) 652
TseI GCWGC 6 cut(s) 62, 148, 194, 684, 1280, 1394
Tsp45I GTSAC 1 cut(s) 652
TspDTI ATGAA 6 cut(s) 30, 163, 438, 665, 723, 888
TspGWI ACGGA 2 cut(s) 741, 1404
TspRI CASTG 2 cut(s) 599, 1396
Van91I CCANNNNNTGG 1 cut(s) 1187
VpaK11BI GGWCC 1 cut(s) 454
XapI RAATTY 2 cut(s) 342, 612
XceI RCATGY 4 cut(s) 206, 962, 1061, 1287
XcmI CCANNNNNNNNNTGG 1 cut(s) 1203
XspI CTAG 1 cut(s) 1242
Zsp2I ATGCAT 1 cut(s) 172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.