MD02G1097900.v1.1

Mitogen-activated protein kinase kinase kinase 1-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
7726918 .. 7732504
5587 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1097900.v1.1.491

Sequence Viewer

Length: 822 bp
ATGGGAAATTCAGGCGGAGTGTTACGTGGCGAAAACTTCGTGACCCTTTGGGAAGCGGTTCTTATGGGACTGTGCGTTAGAGGAAATTTCAGTGATGGAATTTTTTTTGCTGTAAAGGAGGTTTCTTTACTGGACCAAGGGAGCCAGGGAAAGCAGAGCGTTATCCAACTTGAGCAGGTCGAAAAAAACAGTGTTCTTCTGATTGTGTTTTCTTACTCAGTAGATGCTATTCTGTTTCCTGGATTCCTTAGCATTCTTTCTCCTAATACGATTATTGTTGTACAGGAGATTTCCCTTTTAAGTCAGTTTGAACATGACAACATAGTTCGATATCTGGGCACACACAAGGATGAAACTAAGCTCTATATCTTCCTTGAGCTTGTAACAAAAGGCTCACTTGTAAAGCTATATCAAAACTATAACTTAGAGGATTCTCAAGTCTCTGGGTATACAAGGCAGATTCTAAGCGGGTTGACATATCTTCATAAACGTCGTGTGCTTCACAGGGATATCAAATGTGCTAATATATTGGTACATGCAAGTGGATCTGTGAAACTTGCAGACTTTGGGTTAGCCAAGGTGACCAAATTGAATGAATTGAAGTCTTCCAAAGGGACTGCTTATTGGATGGCCCCTGAGGTTGTTAATCAAATGAATGGTGGCTATGGGTTTGCAGCTGACATATGGAGCCTTGGATGCACTGTATTAGAGATGTTAACCCGCCAGCCTCCGTACTTTCCCCTGGAATGGACACAAGCATTATTTCAGATTGGCAGCGGTAAACTTCCTCCAGTTCCTAATGTTAGTGTTACTCTAATTTAG

Protein Analysis

274

Amino Acids

30.28

Weight (kDa)

6.96

Isoelectric Point (pI)

27.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 92 - 246 2.8e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 93 - 266 1e-35 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 166
AccI GTMKAC 1 cut(s) 449
AciI CCGC 5 cut(s) 15, 56, 468, 721, 777
AclWI GGATC 1 cut(s) 553
AcsI RAATTY 3 cut(s) 7, 85, 99
AfaI GTAC 3 cut(s) 282, 534, 734
AfiI CCNNNNNNNGG 1 cut(s) 747
AgsI TTSAA 3 cut(s) 311, 592, 601
AjnI CCWGG 3 cut(s) 144, 238, 741
AluBI AGCT 4 cut(s) 361, 379, 406, 677
AluI AGCT 4 cut(s) 361, 379, 406, 677
Alw26I GTCTC 1 cut(s) 445
AlwI GGATC 1 cut(s) 553
AoxI GGCC 1 cut(s) 630
ApeKI GCWGC 2 cut(s) 674, 774
ApoI RAATTY 3 cut(s) 7, 85, 99
Asp700I GAANNNNTTC 1 cut(s) 57
AspS9I GGNCC 2 cut(s) 133, 631
AsuHPI GGTGA 1 cut(s) 592
AvaII GGWCC 1 cut(s) 133
AxyI CCTNAGG 1 cut(s) 636
BaeGI GKGCMC 1 cut(s) 341
BbsI GAAGAC 1 cut(s) 597
BbvI GCAGC 2 cut(s) 686, 786
BccI CCATC 2 cut(s) 89, 622
BciT130I CCWGG 3 cut(s) 146, 240, 743
BcoDI GTCTC 1 cut(s) 445
BfuAI ACCTGC 1 cut(s) 166
BisI GCNGC 2 cut(s) 675, 775
BlsI GCNGC 2 cut(s) 676, 776
Bme1390I CCNGG 3 cut(s) 146, 240, 743
Bme18I GGWCC 1 cut(s) 133
BmgT120I GGNCC 2 cut(s) 133, 631
BmiI GGNNCC 3 cut(s) 143, 633, 689
BmrFI CCNGG 3 cut(s) 146, 240, 743
BmsI GCATC 2 cut(s) 214, 686
BpiI GAAGAC 1 cut(s) 597
BpmI CTGGAG 1 cut(s) 774
Bpu10I CCTNAGC 1 cut(s) 248
BpuEI CTTGAG 3 cut(s) 191, 395, 420
BsaAI YACGTR 1 cut(s) 26
BsaJI CCNNGG 5 cut(s) 136, 145, 576, 691, 741
Bsc4I CCNNNNNNNGG 1 cut(s) 747
Bse1I ACTGG 2 cut(s) 135, 791
Bse21I CCTNAGG 1 cut(s) 636
BseBI CCWGG 3 cut(s) 146, 240, 743
BseDI CCNNGG 5 cut(s) 136, 145, 576, 691, 741
BseGI GGATG 3 cut(s) 355, 633, 701
BseLI CCNNNNNNNGG 1 cut(s) 747
BseMII CTCAG 2 cut(s) 231, 627
BseNI ACTGG 2 cut(s) 135, 791
BseSI GKGCMC 1 cut(s) 341
BseXI GCAGC 2 cut(s) 686, 786
BshFI GGCC 1 cut(s) 632
BslFI GGGAC 2 cut(s) 81, 628
BslI CCNNNNNNNGG 1 cut(s) 747
BsmAI GTCTC 1 cut(s) 445
BsmFI GGGAC 2 cut(s) 81, 628
BsmI GAATGC 1 cut(s) 252
BsnI GGCC 1 cut(s) 632
Bsp1286I GDGCHC 1 cut(s) 341
Bsp1407I TGTACA 1 cut(s) 280
Bsp143I GATC 1 cut(s) 545
BspACI CCGC 5 cut(s) 15, 56, 468, 721, 777
BspANI GGCC 1 cut(s) 632
BspCNI CTCAG 2 cut(s) 230, 628
BspLI GGNNCC 3 cut(s) 143, 633, 689
BspMI ACCTGC 1 cut(s) 166
BspPI GGATC 1 cut(s) 553
BsrGI TGTACA 1 cut(s) 280
BsrI ACTGG 2 cut(s) 135, 791
BssECI CCNNGG 5 cut(s) 136, 145, 576, 691, 741
BssMI GATC 1 cut(s) 545
BssNAI GTATAC 1 cut(s) 450
BssT1I CCWWGG 3 cut(s) 136, 576, 691
Bst1107I GTATAC 1 cut(s) 450
Bst2UI CCWGG 3 cut(s) 146, 240, 743
Bst4CI ACNGT 3 cut(s) 72, 191, 703
BstAUI TGTACA 1 cut(s) 280
BstBAI YACGTR 1 cut(s) 26
BstC8I GCNNGC 1 cut(s) 725
BstDEI CTNAG 6 cut(s) 217, 248, 357, 424, 464, 636
BstEII GGTNACC 1 cut(s) 580
BstF5I GGATG 3 cut(s) 355, 633, 701
BstKTI GATC 1 cut(s) 548
BstMAI GTCTC 1 cut(s) 445
BstMBI GATC 1 cut(s) 545
BstMWI GCNNNNNNNGC 1 cut(s) 696
BstNI CCWGG 3 cut(s) 146, 240, 743
BstNSI RCATGY 1 cut(s) 539
BstPI GGTNACC 1 cut(s) 580
BstSCI CCNGG 3 cut(s) 144, 238, 741
BstSLI GKGCMC 1 cut(s) 341
BstV1I GCAGC 2 cut(s) 686, 786
BstV2I GAAGAC 1 cut(s) 597
BstX2I RGATCY 1 cut(s) 545
BstYI RGATCY 1 cut(s) 545
BstZ17I GTATAC 1 cut(s) 450
Bsu36I CCTNAGG 1 cut(s) 636
BsuRI GGCC 1 cut(s) 632
BtsCI GGATG 3 cut(s) 355, 633, 701
BtsIMutI CAGTG 3 cut(s) 97, 196, 699
BveI ACCTGC 1 cut(s) 166
Cac8I GCNNGC 1 cut(s) 725
Cfr13I GGNCC 2 cut(s) 133, 631
Csp6I GTAC 3 cut(s) 281, 533, 733
CviAII CATG 2 cut(s) 314, 536
CviQI GTAC 3 cut(s) 281, 533, 733
DdeI CTNAG 6 cut(s) 217, 248, 357, 424, 464, 636
DpnI GATC 1 cut(s) 547
DpnII GATC 1 cut(s) 545
EciI GGCGGA 1 cut(s) 30
Eco130I CCWWGG 3 cut(s) 136, 576, 691
Eco32I GATATC 2 cut(s) 332, 511
Eco47I GGWCC 1 cut(s) 133
Eco81I CCTNAGG 1 cut(s) 636
Eco91I GGTNACC 1 cut(s) 580
EcoO65I GGTNACC 1 cut(s) 580
EcoRII CCWGG 3 cut(s) 144, 238, 741
EcoRV GATATC 2 cut(s) 332, 511
EcoT14I CCWWGG 3 cut(s) 136, 576, 691
ErhI CCWWGG 3 cut(s) 136, 576, 691
FaeI CATG 2 cut(s) 317, 539
FalI AAGNNNNNCTT 4 cut(s) 45, 77, 381, 413
FaqI GGGAC 2 cut(s) 81, 628
FatI CATG 2 cut(s) 313, 535
FauI CCCGC 2 cut(s) 461, 728
FauNDI CATATG 1 cut(s) 683
FblI GTMKAC 1 cut(s) 449
Fnu4HI GCNGC 2 cut(s) 675, 775
FokI GGATG 3 cut(s) 362, 640, 708
Fsp4HI GCNGC 2 cut(s) 675, 775
GluI GCNGC 2 cut(s) 675, 775
GsuI CTGGAG 1 cut(s) 774
HaeIII GGCC 1 cut(s) 632
Hin1II CATG 2 cut(s) 317, 539
HincII GTYRAC 2 cut(s) 474, 717
HindII GTYRAC 2 cut(s) 474, 717
HinfI GANTC 3 cut(s) 243, 431, 460
HpaI GTTAAC 1 cut(s) 717
HphI GGTGA 1 cut(s) 592
Hpy166II GTNNAC 4 cut(s) 450, 474, 717, 782
Hpy188I TCNGA 2 cut(s) 201, 768
Hpy188III TCNNGA 1 cut(s) 40
Hpy8I GTNNAC 4 cut(s) 450, 474, 717, 782
Hpy99I CGWCG 1 cut(s) 495
HpyCH4III ACNGT 3 cut(s) 72, 191, 703
HpyCH4IV ACGT 2 cut(s) 25, 490
HpyCH4V TGCA 4 cut(s) 539, 560, 674, 699
HpyF10VI GCNNNNNNNGC 1 cut(s) 696
HpyF3I CTNAG 6 cut(s) 217, 248, 357, 424, 464, 636
HpySE526I ACGT 2 cut(s) 25, 490
Hsp92II CATG 2 cut(s) 317, 539
KspAI GTTAAC 1 cut(s) 717
Kzo9I GATC 1 cut(s) 545
LmnI GCTCC 2 cut(s) 141, 687
Lsp1109I GCAGC 2 cut(s) 686, 786
LweI GCATC 2 cut(s) 214, 686
MaeII ACGT 2 cut(s) 25, 490
MaeIII GTNAC 5 cut(s) 21, 40, 382, 580, 808
MalI GATC 1 cut(s) 547
MboI GATC 1 cut(s) 545
MboII GAAGA 4 cut(s) 188, 361, 473, 597
MflI RGATCY 1 cut(s) 545
MhlI GDGCHC 1 cut(s) 341
MluCI AATT 6 cut(s) 7, 85, 99, 587, 596, 816
MmeI TCCRAC 1 cut(s) 190
MnlI CCTC 6 cut(s) 74, 112, 421, 631, 738, 798
MroXI GAANNNNTTC 1 cut(s) 57
MseI TTAA 3 cut(s) 299, 645, 716
MslI CAYNNNNRTG 2 cut(s) 348, 540
MspA1I CMGCKG 2 cut(s) 677, 777
MspR9I CCNGG 3 cut(s) 146, 240, 743
Mva1269I GAATGC 1 cut(s) 252
MvaI CCWGG 3 cut(s) 146, 240, 743
MwoI GCNNNNNNNGC 1 cut(s) 696
NdeI CATATG 1 cut(s) 683
NdeII GATC 1 cut(s) 545
NlaIII CATG 2 cut(s) 317, 539
NlaIV GGNNCC 3 cut(s) 143, 633, 689
NmuCI GTSAC 2 cut(s) 40, 580
NspI RCATGY 1 cut(s) 539
PctI GAATGC 1 cut(s) 252
PdmI GAANNNNTTC 1 cut(s) 57
PfeI GAWTC 3 cut(s) 243, 431, 460
PfoI TCCNGGA 1 cut(s) 238
PkrI GCNGC 2 cut(s) 676, 776
Ppu21I YACGTR 1 cut(s) 26
Psp6I CCWGG 3 cut(s) 144, 238, 741
PspEI GGTNACC 1 cut(s) 580
PspGI CCWGG 3 cut(s) 144, 238, 741
PspN4I GGNNCC 3 cut(s) 143, 633, 689
PspPI GGNCC 2 cut(s) 133, 631
PsuI RGATCY 1 cut(s) 545
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 3 cut(s) 282, 534, 734
RsaNI GTAC 3 cut(s) 281, 533, 733
RseI CAYNNNNRTG 2 cut(s) 348, 540
SaqAI TTAA 3 cut(s) 299, 645, 716
SatI GCNGC 2 cut(s) 675, 775
Sau3AI GATC 1 cut(s) 545
Sau96I GGNCC 2 cut(s) 133, 631
ScrFI CCNGG 3 cut(s) 146, 240, 743
SduI GDGCHC 1 cut(s) 341
SfaNI GCATC 2 cut(s) 214, 686
SinI GGWCC 1 cut(s) 133
SmiMI CAYNNNNRTG 2 cut(s) 348, 540
SmlI CTYRAG 3 cut(s) 170, 374, 435
SmoI CTYRAG 3 cut(s) 170, 374, 435
Sse9I AATT 6 cut(s) 7, 85, 99, 587, 596, 816
SsiI CCGC 5 cut(s) 15, 56, 468, 721, 777
StyD4I CCNGG 3 cut(s) 144, 238, 741
StyI CCWWGG 3 cut(s) 136, 576, 691
TaaI ACNGT 3 cut(s) 72, 191, 703
TaiI ACGT 2 cut(s) 28, 493
TaqI TCGA 2 cut(s) 180, 328
TasI AATT 6 cut(s) 7, 85, 99, 587, 596, 816
TatI WGTACW 1 cut(s) 280
TfiI GAWTC 3 cut(s) 243, 431, 460
Tru1I TTAA 3 cut(s) 299, 645, 716
Tru9I TTAA 3 cut(s) 299, 645, 716
TscAI CASTG 3 cut(s) 97, 196, 706
TseFI GTSAC 2 cut(s) 40, 580
TseI GCWGC 2 cut(s) 674, 774
Tsp45I GTSAC 2 cut(s) 40, 580
TspDTI ATGAA 4 cut(s) 366, 473, 609, 668
TspGWI ACGGA 1 cut(s) 720
TspRI CASTG 3 cut(s) 97, 196, 706
VpaK11BI GGWCC 1 cut(s) 133
XapI RAATTY 3 cut(s) 7, 85, 99
XceI RCATGY 1 cut(s) 539
XmiI GTMKAC 1 cut(s) 449
XmnI GAANNNNTTC 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.