RchiOBHm_Chr5g0079491

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000243
Physical Location & Seq
Reverse (-)
85179270 .. 85185041
5772 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35389

Sequence Viewer

Length: 1317 bp
ATGGAAGATCAGAACAGATTTCTTCCACTCTTTTATGACGTGGAGCCCTCTGATGTTCGATTTCAGAAGAAGAGTTTTGGCGAAGCTTTCTGTAAGCATGGAACCAGATCCGAAGAGTTTTGGCTAATTTCTTTGGGTGGTGTACAAATAATTACTAGTAAGACTGATAGAGAAGTTATGGAGGAAATTGTGGGTTTTGTGTGCCGTCAAGTAATACCTATTGAAATTGAAATTGGGATTACAATTAATCCTGAAGCATTTGAAGCAGCAATAAGAAAAGCCATACTTAAAGTTATGAAGAAGGGGCTTAAGGATGACGGGATGGGCAACATCGGCAAGACAACCATGGTGAATCATGTTGCTGCACAATCCAGAGAAAGTAGGAATTTTGATTTTGTGATGACTGGTGTGGTATCCCAGAGCCCTGACTTGACAAAAATTCAAGTCACATTGGCGGGGCCGAGCGGGTGTTGTACTGGGAAGCCTAAGCTTATTATCACTAATTGGAAAAAGGTTGGTCATCTCGGCAACGGCTATTTCGGGTCTGTGTATGAAGTATTTGCTGATTGCGGAAGCTTCTTTGCTGTCAAGGAAGTTTCCTTGCATGATCAAGGAAGAGTTTCTCGACTTGAACAGGAGATTGCTTTTCTGAGTCAGTTTCAACATGAGAACATAGTTCAGTATTATGGTACACAAAAGGATGAATCAAAGCTCTATATCTTTCTGGAACTTGTAACCAAAGGCTCCCTTCAAAAGCTATATCAAACGCACCCTCTTACAGATTCACATGTCTCTGTATACACTAGACAGATCTTGCAAGGTCTGAAGTATCTTCACGACCAAAATGTGATTCACAGGGACATTAAATGCGCAAATATTTTGGTGCATGCTAATGGATCTGTCAAGCTTGCAGACTTTGGATTGGCAAAGGCTATCAAAATGAATGACAAACTATCTCGCCAAGGAACTGCAAACTGGATGGCCCCTGAGCTTGCTAAACCTGGAAATCCAGGTTATGGCCTTCCAGCTGATATATGGAGTCTTGGATGTACTGTGTTGGAGATGTTAACTGGGAAGGTTCCATACCCTGATCTCGAATGGATGGCGGTATTATGGAAACTTATGGAGGGGAAGCTCCCTCTGGTTCCTGATTCTCTTTCAGGAGAGGCACAAGAGTTTATCCATCTATGCTTACAAGTTGAGCCAGATAATCGTCCCACTGCTGCTCAGCTTTTAAAACATCCATTTGTAAATAAGCCGCTTCCTCCCACGTCTTCTGGATCAGTATCTCCTTACAATCACCACAGGCAGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

438

Amino Acids

48.94

Weight (kDa)

7.22

Isoelectric Point (pI)

37.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 170 - 417 9.2e-67 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 173 - 413 1.7e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 871
AccB7I CCANNNNNTGG 1 cut(s) 1016
AccBSI CCGCTC 1 cut(s) 465
AccI GTMKAC 1 cut(s) 798
AciI CCGC 5 cut(s) 455, 465, 570, 1106, 1259
AclWI GGATC 3 cut(s) 102, 904, 1288
AcsI RAATTY 2 cut(s) 385, 438
AcuI CTGAAG 2 cut(s) 273, 845
AfaI GTAC 4 cut(s) 144, 475, 691, 1051
AfiI CCNNNNNNNGG 1 cut(s) 1016
AflII CTTAAG 1 cut(s) 308
AflIII ACRYGT 1 cut(s) 787
AgsI TTSAA 7 cut(s) 224, 230, 263, 443, 632, 662, 752
AhlI ACTAGT 1 cut(s) 155
AjiI CACGTC 2 cut(s) 40, 1272
AjnI CCWGG 2 cut(s) 1000, 1009
AjuI GAANNNNNNNTTGG 4 cut(s) 216, 248, 834, 866
Alw26I GTCTC 1 cut(s) 796
AlwI GGATC 3 cut(s) 102, 904, 1288
AoxI GGCC 3 cut(s) 458, 981, 1018
ApeKI GCWGC 3 cut(s) 266, 362, 1223
ApoI RAATTY 2 cut(s) 385, 438
AseI ATTAAT 1 cut(s) 246
Asp700I GAANNNNTTC 1 cut(s) 619
AspLEI GCGC 1 cut(s) 872
AspS9I GGNCC 2 cut(s) 458, 982
AsuHPI GGTGA 2 cut(s) 361, 1292
BanII GRGCYC 2 cut(s) 48, 425
BarI GAAGNNNNNNTAC 2 cut(s) 1067, 1099
BbsI GAAGAC 1 cut(s) 1266
BbvI GCAGC 3 cut(s) 278, 349, 1210
BccI CCATC 4 cut(s) 316, 973, 1096, 1191
BceAI ACGGC 2 cut(s) 189, 547
BciT130I CCWGG 2 cut(s) 1002, 1011
BciVI GTATCC 1 cut(s) 424
BclI TGATCA 1 cut(s) 607
BcoDI GTCTC 1 cut(s) 796
BcuI ACTAGT 1 cut(s) 155
BfaI CTAG 2 cut(s) 156, 804
BfrI CTTAAG 1 cut(s) 308
BfuI GTATCC 1 cut(s) 424
BglII AGATCT 1 cut(s) 810
BisI GCNGC 4 cut(s) 267, 363, 1224, 1259
BlpI GCTNAGC 1 cut(s) 1227
BlsI GCNGC 4 cut(s) 268, 364, 1225, 1260
Bme1390I CCNGG 2 cut(s) 1002, 1011
BmgBI CACGTC 2 cut(s) 40, 1272
BmgT120I GGNCC 2 cut(s) 458, 982
BmiI GGNNCC 7 cut(s) 45, 103, 459, 745, 984, 1080, 1146
BmrFI CCNGG 2 cut(s) 1002, 1011
BmrI ACTGGG 2 cut(s) 486, 1080
BmuI ACTGGG 2 cut(s) 486, 1080
BpiI GAAGAC 1 cut(s) 1266
Bpu10I CCTNAGC 2 cut(s) 486, 987
Bpu1102I GCTNAGC 1 cut(s) 1227
BsaBI GATNNNNATC 1 cut(s) 1285
BsaJI CCNNGG 2 cut(s) 345, 961
Bsc4I CCNNNNNNNGG 1 cut(s) 1016
Bse1I ACTGG 4 cut(s) 409, 481, 980, 1075
Bse8I GATNNNNATC 1 cut(s) 1285
BseBI CCWGG 2 cut(s) 1002, 1011
BseDI CCNNGG 2 cut(s) 345, 961
BseGI GGATG 7 cut(s) 319, 327, 706, 984, 1052, 1107, 1240
BseJI GATNNNNATC 1 cut(s) 1285
BseLI CCNNNNNNNGG 1 cut(s) 1016
BseMII CTCAG 3 cut(s) 641, 978, 1241
BseNI ACTGG 4 cut(s) 409, 481, 980, 1075
BseXI GCAGC 3 cut(s) 278, 349, 1210
BsgI GTGCAG 1 cut(s) 348
BshFI GGCC 3 cut(s) 460, 983, 1020
BslFI GGGAC 2 cut(s) 872, 1200
BslI CCNNNNNNNGG 1 cut(s) 1016
BsmAI GTCTC 1 cut(s) 796
BsmFI GGGAC 2 cut(s) 872, 1200
BsnI GGCC 3 cut(s) 460, 983, 1020
Bsp1286I GDGCHC 2 cut(s) 48, 425
Bsp1407I TGTACA 1 cut(s) 142
Bsp143I GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
Bsp1720I GCTNAGC 1 cut(s) 1227
Bsp19I CCATGG 1 cut(s) 345
BspACI CCGC 5 cut(s) 455, 465, 570, 1106, 1259
BspANI GGCC 3 cut(s) 460, 983, 1020
BspCNI CTCAG 3 cut(s) 642, 979, 1240
BspLI GGNNCC 7 cut(s) 45, 103, 459, 745, 984, 1080, 1146
BspPI GGATC 3 cut(s) 102, 904, 1288
BspTI CTTAAG 1 cut(s) 308
BsrBI CCGCTC 1 cut(s) 465
BsrGI TGTACA 1 cut(s) 142
BsrI ACTGG 4 cut(s) 409, 481, 980, 1075
BssECI CCNNGG 2 cut(s) 345, 961
BssMI GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
BssNAI GTATAC 1 cut(s) 799
BssT1I CCWWGG 2 cut(s) 345, 961
Bst1107I GTATAC 1 cut(s) 799
Bst2UI CCWGG 2 cut(s) 1002, 1011
Bst4CI ACNGT 1 cut(s) 1054
Bst6I CTCTTC 3 cut(s) 65, 108, 610
BstAFI CTTAAG 1 cut(s) 308
BstAUI TGTACA 1 cut(s) 142
BstC8I GCNNGC 3 cut(s) 888, 909, 993
BstDEI CTNAG 4 cut(s) 486, 650, 987, 1227
BstDSI CCRYGG 1 cut(s) 345
BstF5I GGATG 7 cut(s) 319, 327, 706, 984, 1052, 1107, 1240
BstHHI GCGC 1 cut(s) 872
BstKTI GATC 7 cut(s) 10, 110, 610, 813, 899, 1093, 1283
BstMAI GTCTC 1 cut(s) 796
BstMBI GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
BstMWI GCNNNNNNNGC 2 cut(s) 263, 333
BstNI CCWGG 2 cut(s) 1002, 1011
BstNSI RCATGY 2 cut(s) 791, 890
BstSCI CCNGG 2 cut(s) 1000, 1009
BstV1I GCAGC 3 cut(s) 278, 349, 1210
BstV2I GAAGAC 1 cut(s) 1266
BstX2I RGATCY 3 cut(s) 107, 810, 896
BstYI RGATCY 3 cut(s) 107, 810, 896
BstZ17I GTATAC 1 cut(s) 799
BsuI GTATCC 1 cut(s) 424
BsuRI GGCC 3 cut(s) 460, 983, 1020
BtgI CCRYGG 1 cut(s) 345
BtrI CACGTC 2 cut(s) 40, 1272
BtsCI GGATG 7 cut(s) 319, 327, 706, 984, 1052, 1107, 1240
BtsI GCAGTG 1 cut(s) 1218
BtsIMutI CAGTG 1 cut(s) 1218
Cac8I GCNNGC 3 cut(s) 888, 909, 993
CfoI GCGC 1 cut(s) 872
Cfr13I GGNCC 2 cut(s) 458, 982
Csp6I GTAC 4 cut(s) 143, 474, 690, 1050
CviAII CATG 7 cut(s) 98, 346, 356, 605, 665, 788, 887
CviQI GTAC 4 cut(s) 143, 474, 690, 1050
DdeI CTNAG 4 cut(s) 486, 650, 987, 1227
DpnI GATC 7 cut(s) 9, 109, 609, 812, 898, 1092, 1282
DpnII GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
DraI TTTAAA 1 cut(s) 1236
Eam1104I CTCTTC 3 cut(s) 65, 108, 610
EarI CTCTTC 3 cut(s) 65, 108, 610
Eco130I CCWWGG 2 cut(s) 345, 961
Eco24I GRGCYC 2 cut(s) 48, 425
Eco57I CTGAAG 2 cut(s) 273, 845
EcoRII CCWGG 2 cut(s) 1000, 1009
EcoT14I CCWWGG 2 cut(s) 345, 961
EcoT38I GRGCYC 2 cut(s) 48, 425
ErhI CCWWGG 2 cut(s) 345, 961
FaeI CATG 7 cut(s) 101, 349, 359, 608, 668, 791, 890
FalI AAGNNNNNCTT 4 cut(s) 270, 302, 732, 764
FaqI GGGAC 2 cut(s) 872, 1200
FatI CATG 7 cut(s) 97, 345, 355, 604, 664, 787, 886
FauI CCCGC 2 cut(s) 448, 458
FbaI TGATCA 1 cut(s) 607
FblI GTMKAC 1 cut(s) 798
Fnu4HI GCNGC 4 cut(s) 267, 363, 1224, 1259
FokI GGATG 7 cut(s) 326, 334, 713, 991, 1059, 1114, 1227
FriOI GRGCYC 2 cut(s) 48, 425
Fsp4HI GCNGC 4 cut(s) 267, 363, 1224, 1259
FspBI CTAG 2 cut(s) 156, 804
FspI TGCGCA 1 cut(s) 871
GlaI GCGC 1 cut(s) 871
GluI GCNGC 4 cut(s) 267, 363, 1224, 1259
HaeIII GGCC 3 cut(s) 460, 983, 1020
HhaI GCGC 1 cut(s) 872
Hin1II CATG 7 cut(s) 101, 349, 359, 608, 668, 791, 890
Hin6I GCGC 1 cut(s) 870
HinP1I GCGC 1 cut(s) 870
HincII GTYRAC 1 cut(s) 1068
HindII GTYRAC 1 cut(s) 1068
HindIII AAGCTT 4 cut(s) 84, 488, 574, 905
HinfI GANTC 7 cut(s) 352, 652, 704, 782, 850, 1039, 1151
HpaI GTTAAC 1 cut(s) 1068
HphI GGTGA 2 cut(s) 361, 1292
Hpy166II GTNNAC 4 cut(s) 143, 692, 799, 1068
Hpy188I TCNGA 6 cut(s) 12, 52, 66, 112, 651, 825
Hpy188III TCNNGA 9 cut(s) 251, 372, 624, 725, 836, 1094, 1148, 1161, 1278
Hpy8I GTNNAC 4 cut(s) 143, 692, 799, 1068
HpyAV CCTTC 4 cut(s) 295, 758, 1031, 1069
HpyCH4III ACNGT 1 cut(s) 1054
HpyCH4IV ACGT 2 cut(s) 39, 1271
HpyCH4V TGCA 6 cut(s) 365, 604, 817, 886, 911, 971
HpyF10VI GCNNNNNNNGC 2 cut(s) 263, 333
HpyF3I CTNAG 4 cut(s) 486, 650, 987, 1227
HpySE526I ACGT 2 cut(s) 39, 1271
Hsp92II CATG 7 cut(s) 101, 349, 359, 608, 668, 791, 890
HspAI GCGC 1 cut(s) 870
Ksp22I TGATCA 1 cut(s) 607
KspAI GTTAAC 1 cut(s) 1068
Kzo9I GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
LmnI GCTCC 3 cut(s) 43, 749, 1140
Lsp1109I GCAGC 3 cut(s) 278, 349, 1210
MaeI CTAG 2 cut(s) 156, 804
MaeII ACGT 2 cut(s) 39, 1271
MaeIII GTNAC 2 cut(s) 445, 733
MalI GATC 7 cut(s) 9, 109, 609, 812, 898, 1092, 1282
MbiI CCGCTC 1 cut(s) 465
MboI GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
MboII GAAGA 9 cut(s) 14, 17, 79, 82, 125, 310, 627, 824, 1266
MflI RGATCY 3 cut(s) 107, 810, 896
MhlI GDGCHC 2 cut(s) 48, 425
MluCI AATT 9 cut(s) 126, 150, 186, 225, 231, 243, 385, 438, 502
MlyI GAGTC 2 cut(s) 661, 1048
MmeI TCCRAC 1 cut(s) 1038
MnlI CCTC 7 cut(s) 58, 175, 783, 1120, 1149, 1159, 1275
MroXI GAANNNNTTC 1 cut(s) 619
MseI TTAA 6 cut(s) 246, 288, 309, 864, 1067, 1235
MslI CAYNNNNRTG 1 cut(s) 891
MspA1I CMGCKG 1 cut(s) 1028
MspCI CTTAAG 1 cut(s) 308
MspR9I CCNGG 2 cut(s) 1002, 1011
MvaI CCWGG 2 cut(s) 1002, 1011
MwoI GCNNNNNNNGC 2 cut(s) 263, 333
NcoI CCATGG 1 cut(s) 345
NdeII GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
NlaIII CATG 7 cut(s) 101, 349, 359, 608, 668, 791, 890
NlaIV GGNNCC 7 cut(s) 45, 103, 459, 745, 984, 1080, 1146
NmeAIII GCCGAG 2 cut(s) 486, 504
NmuCI GTSAC 1 cut(s) 445
NsbI TGCGCA 1 cut(s) 871
NspI RCATGY 2 cut(s) 791, 890
PaeI GCATGC 1 cut(s) 890
PciI ACATGT 1 cut(s) 787
PdmI GAANNNNTTC 1 cut(s) 619
PfeI GAWTC 5 cut(s) 352, 704, 782, 850, 1151
PflMI CCANNNNNTGG 1 cut(s) 1016
PkrI GCNGC 4 cut(s) 268, 364, 1225, 1260
PleI GAGTC 2 cut(s) 660, 1047
PpsI GAGTC 2 cut(s) 660, 1047
PscI ACATGT 1 cut(s) 787
PshBI ATTAAT 1 cut(s) 246
Psp6I CCWGG 2 cut(s) 1000, 1009
PspGI CCWGG 2 cut(s) 1000, 1009
PspN4I GGNNCC 7 cut(s) 45, 103, 459, 745, 984, 1080, 1146
PspPI GGNCC 2 cut(s) 458, 982
PsuI RGATCY 3 cut(s) 107, 810, 896
PvuII CAGCTG 1 cut(s) 1028
RsaI GTAC 4 cut(s) 144, 475, 691, 1051
RsaNI GTAC 4 cut(s) 143, 474, 690, 1050
RseI CAYNNNNRTG 1 cut(s) 891
SaqAI TTAA 6 cut(s) 246, 288, 309, 864, 1067, 1235
SatI GCNGC 4 cut(s) 267, 363, 1224, 1259
Sau3AI GATC 7 cut(s) 7, 107, 607, 810, 896, 1090, 1280
Sau96I GGNCC 2 cut(s) 458, 982
SchI GAGTC 2 cut(s) 661, 1048
ScrFI CCNGG 2 cut(s) 1002, 1011
SduI GDGCHC 2 cut(s) 48, 425
SmiMI CAYNNNNRTG 1 cut(s) 891
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
SpeI ACTAGT 1 cut(s) 155
SphI GCATGC 1 cut(s) 890
Sse9I AATT 9 cut(s) 126, 150, 186, 225, 231, 243, 385, 438, 502
SsiI CCGC 5 cut(s) 455, 465, 570, 1106, 1259
SspI AATATT 1 cut(s) 877
SspMI CTAG 2 cut(s) 156, 804
StyD4I CCNGG 2 cut(s) 1000, 1009
StyI CCWWGG 2 cut(s) 345, 961
TaaI ACNGT 1 cut(s) 1054
TaiI ACGT 2 cut(s) 42, 1274
TaqI TCGA 3 cut(s) 58, 625, 1095
TasI AATT 9 cut(s) 126, 150, 186, 225, 231, 243, 385, 438, 502
TatI WGTACW 3 cut(s) 142, 473, 1049
TauI GCSGC 1 cut(s) 1261
TfiI GAWTC 5 cut(s) 352, 704, 782, 850, 1151
Tru1I TTAA 6 cut(s) 246, 288, 309, 864, 1067, 1235
Tru9I TTAA 6 cut(s) 246, 288, 309, 864, 1067, 1235
TscAI CASTG 1 cut(s) 1225
TseFI GTSAC 1 cut(s) 445
TseI GCWGC 3 cut(s) 266, 362, 1223
Tsp45I GTSAC 1 cut(s) 445
TspDTI ATGAA 4 cut(s) 311, 567, 717, 956
TspRI CASTG 1 cut(s) 1225
Van91I CCANNNNNTGG 1 cut(s) 1016
Vha464I CTTAAG 1 cut(s) 308
VspI ATTAAT 1 cut(s) 246
XapI RAATTY 2 cut(s) 385, 438
XceI RCATGY 2 cut(s) 791, 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 1032
XmiI GTMKAC 1 cut(s) 798
XmnI GAANNNNTTC 1 cut(s) 619
XspI CTAG 2 cut(s) 156, 804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.