Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000243

Physical Location & Seq

Genomic Coordinates Reverse (-)

22753115 .. 22761610

Gene Structure 8496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00235690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGAAGAACATGGACGCTGCCAAGCAGAAGCGTCCGAAGCCGAGACTCGATCGCCGGAACGCGAGCAAGAACATAGACTACGACGCCGATAAGCACTCCCCTACTCTCCGGACTCGCTCTCTCGACCTCCCTCCTCTCTACCACAACCAAACCAGCTTCCGCGTCAGAGGCATTGAGGGCGAATTCGACCTCATCTGCGAAAGTCTCGGCCTCTCCGGCCCCGAAGACTTCGCCATCCCACTCGCCGCTTGGGAGGCCCAGCGCGCCCGCTCCTCCTCCGACTTCACTTCCCGCCCTCGCCTCCGCCAGAACGACGACGTTCCGGAACCTAGGGTTACGACCGCCGTGAAAACTGGCGGCGGCGGCGGCGGCGGAGGAATTAGGGGTGTTCGGCCCCCGCCGGTTGTGTTGAAATCTTCTGCTCTTGCTCCTCCGCAAGACCACATAAACTCGCCTATTCCTGCTGATGACGTCAGCTCGTCGGAGGAAGAGGACCTTGTGGTGAGTGAAGCAAATGGTGGTGGGAGTGAAGCGGGTGATGAAGTGAGGTCAGCCAAGGGCAATGAGTTGGCTGAGTCTGCGTCTTGCACCTCATCTCCGTCCTATAATGATAGTGATGACTATGGTGTTGGTATTGCTGTGATGAGGGTGCAGCCAATCCATAGTGTGTTTTCTCCTAATGGGAAGTTCAGACGCAGTGTCTCGTCTTCGTGGCAAAGAGGTCAGCTTTTGGGGAGTGGTTCCTATGGAACTGTCTATGAAGGCTTTACTGATGATGGATTCTTTTTTGCTGTCAAGGAGGTTTCTTTACTTGATCAAGGAAGCCAGGCAAAGCAGAGTCTCTTACAACTTGAGCAGGAGATTCATCTTTTAAGTCAGTTTGAACATGACAACATTGTTCAATATCTCGGTACAGACAAGGATGAGACTAAGCTCTATATCTTTCTTGAGCTTGTAACAAAAGGATCACTTGCAAGTCTCTATTCAAAGTATCTCTTGAGGGATTCTCAAGTCTCTGTGTTCACAAAGCAGATTTTGAGTGGCTTGAAATATCTTCACGATCGTAATGTGGTCCACAGGGATATCAAATGTGCTAATATATTGGTGGATGCAAGTGGATCTGTGAAACTTGCAGATTTTGGTTTAGCTAAGGCAACCAAAATGAACGATGTGAAGTCTTGCAAAGGGACTGCCTATTGGATGGCCCCAGAGGTTGTTAATCGAAAGAATCATGGGTATGGGCTTGCAGCTGACATATGGAGTCTTGGATGTGCTGTGTTGGAGATGTTAACCCGTCAGCCTCCATACTCTCACCTGGAAGGCATGCAAGCATTATTTCAGATCGGAAGGGGTGAGCCTCCTGCAATTCCTGATTCCTTATCAAGAGATGCTAGAGATTTCATTTTGGAGTGTTTACAAGTTAACCAAAACAACCGGCCTACAGCAGCCCAGCTCTTGGAGCATCCATTCTTGAAAAGGCCTCAAACTTCTCCAGTCCCTGCTTCTCCCCATTCCAACAGTTTACGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04016 ko04626 map04016 map04626

Pfam Domains

Protein Families

Pkinase

Protein Analysis

510

Amino Acids

55.81

Weight (kDa)

6.34

Isoelectric Point (pI)

55.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	239 - 491	5e-69	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	241 - 487	2e-47	Protein tyrosine and serine/threonine kinase
Kinase-like	PF14531	340 - 437	5.3e-06	Kinase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca	FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica	MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica	Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis	pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis	RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata	RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora	Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii	Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa	Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha	Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana	Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	474
AccB7I	CCANNNNNTGG	1 cut(s)	1456
AccBSI	CCGCTC	1 cut(s)	270
AccII	CGCG	3 cut(s)	62, 162, 264
AccIII	TCCGGA	2 cut(s)	108, 322
AclWI	GGATC	3 cut(s)	973, 1126, 1521
AcsI	RAATTY	1 cut(s)	182
AcyI	GRCGYC	2 cut(s)	84, 471
AfaI	GTAC	1 cut(s)	913
AfiI	CCNNNNNNNGG	1 cut(s)	1456
AgsI	TTSAA	6 cut(s)	412, 884, 902, 987, 1048, 1474
AhdI	GACNNNNNGTC	1 cut(s)	698
AjnI	CCWGG	2 cut(s)	825, 1314
AluBI	AGCT	8 cut(s)	156, 477, 727, 934, 952, 1148, 1250, 1453
AluI	AGCT	8 cut(s)	156, 477, 727, 934, 952, 1148, 1250, 1453
Alw26I	GTCTC	7 cut(s)	37, 209, 706, 845, 920, 983, 1018
AlwI	GGATC	3 cut(s)	973, 1126, 1521
AlwNI	CAGNNNCTG	1 cut(s)	1499
Aor13HI	TCCGGA	2 cut(s)	108, 322
AoxI	GGCC	7 cut(s)	208, 217, 255, 392, 1203, 1436, 1478
ApeKI	GCWGC	4 cut(s)	17, 652, 1247, 1445
ApoI	RAATTY	1 cut(s)	182
AspA2I	CCTAGG	1 cut(s)	329
AspLEI	GCGC	2 cut(s)	264, 266
AspS9I	GGNCC	6 cut(s)	218, 256, 393, 493, 1072, 1204
AsuHPI	GGTGA	4 cut(s)	514, 548, 1304, 1364
AvaII	GGWCC	2 cut(s)	493, 1072
AvrII	CCTAGG	1 cut(s)	329
BbsI	GAAGAC	2 cut(s)	231, 699
BbvI	GCAGC	4 cut(s)	4, 664, 1259, 1457
BccI	CCATC	3 cut(s)	242, 770, 1195
BceAI	ACGGC	1 cut(s)	329
BciT130I	CCWGG	2 cut(s)	827, 1316
BclI	TGATCA	1 cut(s)	814
BcoDI	GTCTC	7 cut(s)	37, 209, 706, 845, 920, 983, 1018
BfaI	CTAG	2 cut(s)	330, 1392
BfmI	CTRYAG	1 cut(s)	1440
BglI	GCCNNNNNGGC	1 cut(s)	216
BlnI	CCTAGG	1 cut(s)	329
Bme1390I	CCNGG	2 cut(s)	827, 1316
Bme18I	GGWCC	2 cut(s)	493, 1072
BmeRI	GACNNNNNGTC	1 cut(s)	698
BmgT120I	GGNCC	6 cut(s)	218, 256, 393, 493, 1072, 1204
BmiI	GGNNCC	5 cut(s)	220, 327, 395, 742, 1206
BmrFI	CCNGG	2 cut(s)	827, 1316
BmsI	GCATC	3 cut(s)	1099, 1378, 1471
BpiI	GAAGAC	2 cut(s)	231, 699
BplI	GAGNNNNNCTC	2 cut(s)	991, 1023
BpmI	CTGGAG	1 cut(s)	1476
Bpu10I	CCTNAGC	1 cut(s)	1149
BpuEI	CTTGAG	4 cut(s)	872, 968, 993, 1018
BsaHI	GRCGYC	2 cut(s)	84, 471
BsaJI	CCNNGG	2 cut(s)	329, 555
BsaWI	WCCGGW	2 cut(s)	108, 322
BsaXI	ACNNNNNCTCC	2 cut(s)	580, 610
Bsc4I	CCNNNNNNNGG	1 cut(s)	1456
Bse118I	RCCGGY	2 cut(s)	400, 1434
Bse1I	ACTGG	2 cut(s)	358, 1493
Bse3DI	GCAATG	1 cut(s)	568
BseAI	TCCGGA	2 cut(s)	108, 322
BseBI	CCWGG	2 cut(s)	827, 1316
BseDI	CCNNGG	2 cut(s)	329, 555
BseGI	GGATG	6 cut(s)	234, 928, 1114, 1206, 1274, 1462
BseLI	CCNNNNNNNGG	1 cut(s)	1456
BseMI	GCAATG	1 cut(s)	568
BseMII	CTCAG	1 cut(s)	564
BseNI	ACTGG	2 cut(s)	358, 1493
BsePI	GCGCGC	1 cut(s)	262
BseRI	GAGGAG	4 cut(s)	123, 262, 265, 420
BseXI	GCAGC	4 cut(s)	4, 664, 1259, 1457
BseYI	CCCAGC	2 cut(s)	258, 1449
BsgI	GTGCAG	1 cut(s)	671
Bsh1236I	CGCG	3 cut(s)	62, 162, 264
Bsh1285I	CGRYCG	3 cut(s)	52, 342, 1063
BshFI	GGCC	7 cut(s)	210, 219, 257, 394, 1205, 1438, 1480
BsiEI	CGRYCG	3 cut(s)	52, 342, 1063
BsiSI	CCGG	6 cut(s)	55, 109, 216, 323, 401, 1435
BslFI	GGGAC	2 cut(s)	1201, 1481
BslI	CCNNNNNNNGG	1 cut(s)	1456
BsmAI	GTCTC	7 cut(s)	37, 209, 706, 845, 920, 983, 1018
BsmFI	GGGAC	2 cut(s)	1201, 1481
BsnI	GGCC	7 cut(s)	210, 219, 257, 394, 1205, 1438, 1480
Bsp13I	TCCGGA	2 cut(s)	108, 322
Bsp143I	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
BspANI	GGCC	7 cut(s)	210, 219, 257, 394, 1205, 1438, 1480
BspCNI	CTCAG	1 cut(s)	565
BspEI	TCCGGA	2 cut(s)	108, 322
BspFNI	CGCG	3 cut(s)	62, 162, 264
BspLI	GGNNCC	5 cut(s)	220, 327, 395, 742, 1206
BspPI	GGATC	3 cut(s)	973, 1126, 1521
BsrBI	CCGCTC	1 cut(s)	270
BsrDI	GCAATG	1 cut(s)	568
BsrFI	RCCGGY	2 cut(s)	400, 1434
BsrI	ACTGG	2 cut(s)	358, 1493
BssAI	RCCGGY	2 cut(s)	400, 1434
BssECI	CCNNGG	2 cut(s)	329, 555
BssHII	GCGCGC	1 cut(s)	262
BssMI	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
BssNI	GRCGYC	2 cut(s)	84, 471
BssT1I	CCWWGG	2 cut(s)	329, 555
Bst2UI	CCWGG	2 cut(s)	827, 1316
Bst4CI	ACNGT	2 cut(s)	754, 1520
Bst6I	CTCTTC	1 cut(s)	483
BstACI	GRCGYC	2 cut(s)	84, 471
BstC8I	GCNNGC	6 cut(s)	64, 264, 268, 1245, 1325, 1329
BstDEI	CTNAG	3 cut(s)	573, 930, 1149
BstF5I	GGATG	6 cut(s)	234, 928, 1114, 1206, 1274, 1462
BstFNI	CGCG	3 cut(s)	62, 162, 264
BstHHI	GCGC	2 cut(s)	264, 266
BstKTI	GATC	7 cut(s)	52, 817, 968, 1063, 1121, 1344, 1529
BstMAI	GTCTC	7 cut(s)	37, 209, 706, 845, 920, 983, 1018
BstMBI	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
BstMCI	CGRYCG	3 cut(s)	52, 342, 1063
BstNI	CCWGG	2 cut(s)	827, 1316
BstNSI	RCATGY	1 cut(s)	1327
BstSCI	CCNGG	2 cut(s)	825, 1314
BstSFI	CTRYAG	1 cut(s)	1440
BstUI	CGCG	3 cut(s)	62, 162, 264
BstV1I	GCAGC	4 cut(s)	4, 664, 1259, 1457
BstV2I	GAAGAC	2 cut(s)	231, 699
BstX2I	RGATCY	1 cut(s)	1118
BstYI	RGATCY	1 cut(s)	1118
BsuRI	GGCC	7 cut(s)	210, 219, 257, 394, 1205, 1438, 1480
BtsCI	GGATG	6 cut(s)	234, 928, 1114, 1206, 1274, 1462
BtsI	GCAGTG	1 cut(s)	703
BtsIMutI	CAGTG	1 cut(s)	703
Cac8I	GCNNGC	6 cut(s)	64, 264, 268, 1245, 1325, 1329
CaiI	CAGNNNCTG	1 cut(s)	1499
CfoI	GCGC	2 cut(s)	264, 266
Cfr10I	RCCGGY	2 cut(s)	400, 1434
Cfr13I	GGNCC	6 cut(s)	218, 256, 393, 493, 1072, 1204
CseI	GACGC	6 cut(s)	20, 23, 92, 151, 570, 702
Csp6I	GTAC	1 cut(s)	912
CviAII	CATG	4 cut(s)	10, 887, 1232, 1324
CviQI	GTAC	1 cut(s)	912
DdeI	CTNAG	3 cut(s)	573, 930, 1149
DpnI	GATC	7 cut(s)	51, 816, 967, 1062, 1120, 1343, 1528
DpnII	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
DriI	GACNNNNNGTC	1 cut(s)	698
Eam1104I	CTCTTC	1 cut(s)	483
Eam1105I	GACNNNNNGTC	1 cut(s)	698
EarI	CTCTTC	1 cut(s)	483
EciI	GGCGGA	2 cut(s)	293, 387
Eco130I	CCWWGG	2 cut(s)	329, 555
Eco147I	AGGCCT	1 cut(s)	1480
Eco32I	GATATC	1 cut(s)	1084
Eco47I	GGWCC	2 cut(s)	493, 1072
EcoO109I	RGGNCCY	1 cut(s)	493
EcoRI	GAATTC	1 cut(s)	182
EcoRII	CCWGG	2 cut(s)	825, 1314
EcoRV	GATATC	1 cut(s)	1084
EcoT14I	CCWWGG	2 cut(s)	329, 555
ErhI	CCWWGG	2 cut(s)	329, 555
FaeI	CATG	4 cut(s)	13, 890, 1235, 1327
FalI	AAGNNNNNCTT	6 cut(s)	480, 512, 954, 986, 980, 1012
FaqI	GGGAC	2 cut(s)	1201, 1481
FatI	CATG	4 cut(s)	9, 886, 1231, 1323
FauI	CCCGC	4 cut(s)	275, 299, 405, 526
FauNDI	CATATG	1 cut(s)	1256
FbaI	TGATCA	1 cut(s)	814
FokI	GGATG	6 cut(s)	221, 935, 1121, 1213, 1281, 1449
FspBI	CTAG	2 cut(s)	330, 1392
GlaI	GCGC	2 cut(s)	263, 265
GsaI	CCCAGC	2 cut(s)	262, 1453
GsuI	CTGGAG	1 cut(s)	1476
HaeIII	GGCC	7 cut(s)	210, 219, 257, 394, 1205, 1438, 1480
HapII	CCGG	6 cut(s)	55, 109, 216, 323, 401, 1435
HgaI	GACGC	6 cut(s)	20, 23, 92, 151, 570, 702
HhaI	GCGC	2 cut(s)	264, 266
Hin1I	GRCGYC	2 cut(s)	84, 471
Hin1II	CATG	4 cut(s)	13, 890, 1235, 1327
Hin6I	GCGC	2 cut(s)	262, 264
HinP1I	GCGC	2 cut(s)	262, 264
HincII	GTYRAC	2 cut(s)	1290, 1423
HindII	GTYRAC	2 cut(s)	1290, 1423
HpaI	GTTAAC	2 cut(s)	1290, 1423
HpaII	CCGG	6 cut(s)	55, 109, 216, 323, 401, 1435
HphI	GGTGA	4 cut(s)	514, 548, 1304, 1364
Hpy166II	GTNNAC	6 cut(s)	1023, 1075, 1290, 1415, 1423, 1523
Hpy188I	TCNGA	7 cut(s)	36, 167, 280, 484, 692, 1341, 1346
Hpy8I	GTNNAC	6 cut(s)	1023, 1075, 1290, 1415, 1423, 1523
Hpy99I	CGWCG	4 cut(s)	86, 317, 320, 484
HpyAV	CCTTC	3 cut(s)	755, 1313, 1341
HpyCH4III	ACNGT	2 cut(s)	754, 1520
HpyCH4IV	ACGT	2 cut(s)	318, 471
HpyCH4V	TGCA	9 cut(s)	588, 652, 974, 1112, 1133, 1182, 1247, 1327, 1364
HpyF3I	CTNAG	3 cut(s)	573, 930, 1149
HpySE526I	ACGT	2 cut(s)	318, 471
Hsp92I	GRCGYC	2 cut(s)	84, 471
Hsp92II	CATG	4 cut(s)	13, 890, 1235, 1327
HspAI	GCGC	2 cut(s)	262, 264
Kpn2I	TCCGGA	2 cut(s)	108, 322
Ksp22I	TGATCA	1 cut(s)	814
KspAI	GTTAAC	2 cut(s)	1290, 1423
Kzo9I	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
LmnI	GCTCC	3 cut(s)	275, 433, 1459
Lsp1109I	GCAGC	4 cut(s)	4, 664, 1259, 1457
LweI	GCATC	3 cut(s)	1099, 1378, 1471
MaeI	CTAG	2 cut(s)	330, 1392
MaeII	ACGT	2 cut(s)	318, 471
MaeIII	GTNAC	2 cut(s)	334, 955
MalI	GATC	7 cut(s)	51, 816, 967, 1062, 1120, 1343, 1528
MbiI	CCGCTC	1 cut(s)	270
MboI	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
MboII	GAAGA	6 cut(s)	16, 236, 408, 500, 699, 1046
MflI	RGATCY	1 cut(s)	1118
MluCI	AATT	3 cut(s)	182, 378, 1365
MlyI	GAGTC	5 cut(s)	39, 106, 584, 847, 1270
MmeI	TCCRAC	3 cut(s)	303, 462, 1260
MroI	TCCGGA	2 cut(s)	108, 322
MseI	TTAA	4 cut(s)	872, 1218, 1289, 1422
MslI	CAYNNNNRTG	1 cut(s)	1236
MspA1I	CMGCKG	1 cut(s)	1250
MspI	CCGG	6 cut(s)	55, 109, 216, 323, 401, 1435
MspR9I	CCNGG	2 cut(s)	827, 1316
MvaI	CCWGG	2 cut(s)	827, 1316
MvnI	CGCG	3 cut(s)	62, 162, 264
NdeI	CATATG	1 cut(s)	1256
NdeII	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
NlaIII	CATG	4 cut(s)	13, 890, 1235, 1327
NlaIV	GGNNCC	5 cut(s)	220, 327, 395, 742, 1206
NmeAIII	GCCGAG	2 cut(s)	66, 186
NspI	RCATGY	1 cut(s)	1327
PaeI	GCATGC	1 cut(s)	1327
PauI	GCGCGC	1 cut(s)	262
PceI	AGGCCT	1 cut(s)	1480
PfeI	GAWTC	5 cut(s)	780, 862, 1004, 1228, 1373
PflMI	CCANNNNNTGG	1 cut(s)	1456
Ple19I	CGATCG	2 cut(s)	52, 1063
PleI	GAGTC	5 cut(s)	39, 106, 583, 846, 1269
PpsI	GAGTC	5 cut(s)	39, 106, 583, 846, 1269
PpuMI	RGGWCCY	1 cut(s)	493
Psp5II	RGGWCCY	1 cut(s)	493
Psp6I	CCWGG	2 cut(s)	825, 1314
PspFI	CCCAGC	2 cut(s)	258, 1449
PspGI	CCWGG	2 cut(s)	825, 1314
PspN4I	GGNNCC	5 cut(s)	220, 327, 395, 742, 1206
PspPI	GGNCC	6 cut(s)	218, 256, 393, 493, 1072, 1204
PspPPI	RGGWCCY	1 cut(s)	493
PsrI	GAACNNNNNNTAC	2 cut(s)	62, 94
PstNI	CAGNNNCTG	1 cut(s)	1499
PsuI	RGATCY	1 cut(s)	1118
PteI	GCGCGC	1 cut(s)	262
PvuI	CGATCG	2 cut(s)	52, 1063
PvuII	CAGCTG	1 cut(s)	1250
RsaI	GTAC	1 cut(s)	913
RsaNI	GTAC	1 cut(s)	912
RseI	CAYNNNNRTG	1 cut(s)	1236
SaqAI	TTAA	4 cut(s)	872, 1218, 1289, 1422
Sau3AI	GATC	7 cut(s)	49, 814, 965, 1060, 1118, 1341, 1526
Sau96I	GGNCC	6 cut(s)	218, 256, 393, 493, 1072, 1204
SchI	GAGTC	5 cut(s)	39, 106, 584, 847, 1270
ScrFI	CCNGG	2 cut(s)	827, 1316
SfaNI	GCATC	3 cut(s)	1099, 1378, 1471
SfcI	CTRYAG	1 cut(s)	1440
SfiI	GGCCNNNNNGGCC	1 cut(s)	216
SinI	GGWCC	2 cut(s)	493, 1072
SmiMI	CAYNNNNRTG	1 cut(s)	1236
SmlI	CTYRAG	4 cut(s)	851, 947, 997, 1008
SmoI	CTYRAG	4 cut(s)	851, 947, 997, 1008
SphI	GCATGC	1 cut(s)	1327
Sse9I	AATT	3 cut(s)	182, 378, 1365
SseBI	AGGCCT	1 cut(s)	1480
SspMI	CTAG	2 cut(s)	330, 1392
StuI	AGGCCT	1 cut(s)	1480
StyD4I	CCNGG	2 cut(s)	825, 1314
StyI	CCWWGG	2 cut(s)	329, 555
TaaI	ACNGT	2 cut(s)	754, 1520
TaiI	ACGT	2 cut(s)	321, 474
TaqI	TCGA	4 cut(s)	48, 123, 186, 1222
TasI	AATT	3 cut(s)	182, 378, 1365
TauI	GCSGC	6 cut(s)	248, 360, 363, 366, 369, 372
TfiI	GAWTC	5 cut(s)	780, 862, 1004, 1228, 1373
Tru1I	TTAA	4 cut(s)	872, 1218, 1289, 1422
Tru9I	TTAA	4 cut(s)	872, 1218, 1289, 1422
TscAI	CASTG	1 cut(s)	703
TseI	GCWGC	4 cut(s)	17, 652, 1247, 1445
TspDTI	ATGAA	6 cut(s)	17, 555, 774, 854, 1178, 1390
TspGWI	ACGGA	1 cut(s)	588
TspRI	CASTG	1 cut(s)	703
Van91I	CCANNNNNTGG	1 cut(s)	1456
VpaK11BI	GGWCC	2 cut(s)	493, 1072
XapI	RAATTY	1 cut(s)	182
XceI	RCATGY	1 cut(s)	1327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	246
XmaJI	CCTAGG	1 cut(s)	329
XspI	CTAG	2 cut(s)	330, 1392
ZraI	GACGTC	1 cut(s)	472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.