Rh1AG239500

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000243
Physical Location & Seq
Reverse (-)
44957195 .. 44961076
3882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG239500.1

Sequence Viewer

Length: 957 bp
ATGCAAAGAATGAGCCATGAGATGCAATATATTGAATTCCTTGCAAAAATGAATTTTTCTCCTGATAGCAAATGGACAAGAATTCAGCAACTGGGTCGTGGGTCTTCTGGATCTGCCTTCGAAGGATGTTTTGAGAACGGATTCCACTTTGCTGTCAAAGTAGTTTCCTTGCATGATGAAGGAAGTCGAGGGAGGAACTGCGTCAATCAACTTGAACAGGAGATTGCTCTTTTGAGTCGGTTTAAACATCAGAACATAGTTCAATATTATTACTCATATAAGGATGAACTGAACCTTTATATGTTCATGGAGCTTGTACCTCGAGGATCCCTACGAAGCTTCTATCAGACAAATCCCGTTTCCTGTCTTCTCGTCTCCAAATACACAAAAGATATTCTTCATGGTCTTAAGTATCTTCATGACCACAATGTGATTCACAGGGACATAAAATGTGCAAATATATTGATAGATGCTCAAGGATCTGCAAAGCTCGCAGATTTGGGAGCGGGAAAGATAATCAGAATGAATGATATTAAATCTTTCCAGGGCAGCGCATTTTGGACAGCTCCTGAGGTTCAGAGTGCAATAAGGCATAACCAAGGTTATGGGATTTCAGCTGATATATGGAGCCTTGGTTGCACCGTATTGGAGATGTTAACCAGGCGTGTTCCTTACCATGATATGACACCGGAACAGGCATTATGGAGATCATTGAACGGGAAGCTCCCTGAGATTCCTGATTTTCTCTCAGTGGATGCACAAGATTTCATCCAGAAATGCCTAAAGATCAACCCAAATGATCGTCCCACTGCTTCAGAGCTCTTAGAGCACCCATTTGTCTTGAGGCGGCCAAGGTCGGGCAACATGCCAAGGCGAGGTTCCGTTCTTAAGAACATTTTCAAAAAGTTGTCAAAAAATTTTGCAAATGTTTTTACGAATATAGTTTCTGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

318

Amino Acids

36.44

Weight (kDa)

9.13

Isoelectric Point (pI)

42.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 26 - 280 2.3e-62 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 28 - 276 1.6e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 321
AccBSI CCGCTC 1 cut(s) 506
AciI CCGC 2 cut(s) 506, 847
AclWI GGATC 4 cut(s) 118, 321, 334, 487
AcoI YGGCCR 1 cut(s) 848
AcsI RAATTY 4 cut(s) 35, 52, 81, 916
AcuI CTGAAG 1 cut(s) 798
AdeI CACNNNGTG 1 cut(s) 430
AfaI GTAC 1 cut(s) 318
AfiI CCNNNNNNNGG 2 cut(s) 857, 875
AflII CTTAAG 2 cut(s) 407, 887
AgsI TTSAA 5 cut(s) 35, 215, 263, 715, 901
AjnI CCWGG 2 cut(s) 543, 659
AjuI GAANNNNNNNTTGG 2 cut(s) 862, 894
AluBI AGCT 7 cut(s) 313, 339, 490, 566, 617, 724, 820
AluI AGCT 7 cut(s) 313, 339, 490, 566, 617, 724, 820
Alw21I GWGCWC 2 cut(s) 822, 831
Alw26I GTCTC 1 cut(s) 379
AlwI GGATC 4 cut(s) 118, 321, 334, 487
AlwNI CAGNNNCTG 2 cut(s) 91, 569
Ama87I CYCGRG 1 cut(s) 321
AoxI GGCC 1 cut(s) 848
ApeKI GCWGC 1 cut(s) 549
ApoI RAATTY 4 cut(s) 35, 52, 81, 916
Asp700I GAANNNNTTC 2 cut(s) 140, 896
AspLEI GCGC 1 cut(s) 554
AsuII TTCGAA 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 321
AxyI CCTNAGG 1 cut(s) 570
BamHI GGATCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 822
BbsI GAAGAC 2 cut(s) 96, 359
Bbv12I GWGCWC 2 cut(s) 822, 831
BbvI GCAGC 1 cut(s) 561
BcgI CGANNNNNNTGC 2 cut(s) 77, 111
BciT130I CCWGG 2 cut(s) 545, 661
BcoDI GTCTC 1 cut(s) 379
BfrI CTTAAG 2 cut(s) 407, 887
BisI GCNGC 2 cut(s) 550, 848
BlsI GCNGC 2 cut(s) 551, 849
Bme1390I CCNGG 2 cut(s) 545, 661
BmeT110I CYCGRG 1 cut(s) 321
BmiI GGNNCC 3 cut(s) 328, 629, 880
BmrFI CCNGG 2 cut(s) 545, 661
BmrI ACTGGG 1 cut(s) 101
BmsI GCATC 3 cut(s) 12, 460, 745
BmuI ACTGGG 1 cut(s) 101
BpiI GAAGAC 2 cut(s) 96, 359
Bpu14I TTCGAA 1 cut(s) 120
BpuEI CTTGAG 2 cut(s) 459, 862
BsaJI CCNNGG 5 cut(s) 544, 598, 631, 851, 869
BsaWI WCCGGW 1 cut(s) 688
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 2 cut(s) 857, 875
Bse1I ACTGG 1 cut(s) 96
Bse21I CCTNAGG 1 cut(s) 570
BseBI CCWGG 2 cut(s) 545, 661
BseDI CCNNGG 5 cut(s) 544, 598, 631, 851, 869
BseGI GGATG 4 cut(s) 131, 289, 760, 768
BseLI CCNNNNNNNGG 2 cut(s) 857, 875
BseMII CTCAG 3 cut(s) 561, 720, 762
BseNI ACTGG 1 cut(s) 96
BseXI GCAGC 1 cut(s) 561
BshFI GGCC 1 cut(s) 850
BsiHKAI GWGCWC 2 cut(s) 822, 831
BsiHKCI CYCGRG 1 cut(s) 321
BsiSI CCGG 1 cut(s) 689
BslFI GGGAC 2 cut(s) 455, 789
BslI CCNNNNNNNGG 2 cut(s) 857, 875
BsmAI GTCTC 1 cut(s) 379
BsmBI CGTCTC 1 cut(s) 379
BsmFI GGGAC 2 cut(s) 455, 789
BsnI GGCC 1 cut(s) 850
BsoBI CYCGRG 1 cut(s) 321
Bsp119I TTCGAA 1 cut(s) 120
Bsp1286I GDGCHC 2 cut(s) 822, 831
Bsp143I GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
BspACI CCGC 2 cut(s) 506, 847
BspANI GGCC 1 cut(s) 850
BspCNI CTCAG 3 cut(s) 562, 721, 761
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 3 cut(s) 328, 629, 880
BspPI GGATC 4 cut(s) 118, 321, 334, 487
BspT104I TTCGAA 1 cut(s) 120
BspTI CTTAAG 2 cut(s) 407, 887
BsrBI CCGCTC 1 cut(s) 506
BsrI ACTGG 1 cut(s) 96
BssECI CCNNGG 5 cut(s) 544, 598, 631, 851, 869
BssMI GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
BssT1I CCWWGG 4 cut(s) 598, 631, 851, 869
Bst2UI CCWGG 2 cut(s) 545, 661
Bst4CI ACNGT 1 cut(s) 643
BstAFI CTTAAG 2 cut(s) 407, 887
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 1 cut(s) 492
BstDEI CTNAG 4 cut(s) 570, 729, 748, 823
BstF5I GGATG 4 cut(s) 131, 289, 760, 768
BstHHI GCGC 1 cut(s) 554
BstKTI GATC 7 cut(s) 113, 329, 482, 710, 789, 802, 952
BstMAI GTCTC 1 cut(s) 379
BstMBI GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
BstMWI GCNNNNNNNGC 3 cut(s) 491, 636, 826
BstNI CCWGG 2 cut(s) 545, 661
BstNSI RCATGY 1 cut(s) 868
BstSCI CCNGG 2 cut(s) 543, 659
BstV1I GCAGC 1 cut(s) 561
BstV2I GAAGAC 2 cut(s) 96, 359
BstX2I RGATCY 3 cut(s) 110, 326, 479
BstXI CCANNNNNNTGG 1 cut(s) 605
BstYI RGATCY 3 cut(s) 110, 326, 479
Bsu36I CCTNAGG 1 cut(s) 570
BsuRI GGCC 1 cut(s) 850
BtsCI GGATG 4 cut(s) 131, 289, 760, 768
BtsI GCAGTG 1 cut(s) 807
BtsIMutI CAGTG 2 cut(s) 756, 807
Cac8I GCNNGC 1 cut(s) 492
CaiI CAGNNNCTG 2 cut(s) 91, 569
CciI TCATGA 1 cut(s) 418
CfoI GCGC 1 cut(s) 554
CseI GACGC 1 cut(s) 190
Csp6I GTAC 1 cut(s) 317
CviAII CATG 7 cut(s) 17, 173, 307, 401, 419, 677, 865
CviQI GTAC 1 cut(s) 317
DdeI CTNAG 4 cut(s) 570, 729, 748, 823
DpnI GATC 7 cut(s) 112, 328, 481, 709, 788, 801, 951
DpnII GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
DraI TTTAAA 1 cut(s) 244
DraIII CACNNNGTG 1 cut(s) 430
EaeI YGGCCR 1 cut(s) 848
Ecl136II GAGCTC 1 cut(s) 820
Eco130I CCWWGG 4 cut(s) 598, 631, 851, 869
Eco24I GRGCYC 1 cut(s) 822
Eco53kI GAGCTC 1 cut(s) 820
Eco57I CTGAAG 1 cut(s) 798
Eco81I CCTNAGG 1 cut(s) 570
Eco88I CYCGRG 1 cut(s) 321
EcoICRI GAGCTC 1 cut(s) 820
EcoRI GAATTC 2 cut(s) 35, 81
EcoRII CCWGG 2 cut(s) 543, 659
EcoT14I CCWWGG 4 cut(s) 598, 631, 851, 869
EcoT38I GRGCYC 1 cut(s) 822
ErhI CCWWGG 4 cut(s) 598, 631, 851, 869
Esp3I CGTCTC 1 cut(s) 379
FaeI CATG 7 cut(s) 20, 176, 310, 404, 422, 680, 868
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FaqI GGGAC 2 cut(s) 455, 789
FatI CATG 7 cut(s) 16, 172, 306, 400, 418, 676, 864
FauI CCCGC 1 cut(s) 499
Fnu4HI GCNGC 2 cut(s) 550, 848
FokI GGATG 4 cut(s) 138, 296, 755, 767
FriOI GRGCYC 1 cut(s) 822
Fsp4HI GCNGC 2 cut(s) 550, 848
GlaI GCGC 1 cut(s) 553
GluI GCNGC 2 cut(s) 550, 848
HaeIII GGCC 1 cut(s) 850
HapII CCGG 1 cut(s) 689
HgaI GACGC 1 cut(s) 190
HhaI GCGC 1 cut(s) 554
Hin1II CATG 7 cut(s) 20, 176, 310, 404, 422, 680, 868
Hin6I GCGC 1 cut(s) 552
HinP1I GCGC 1 cut(s) 552
HincII GTYRAC 1 cut(s) 657
HindII GTYRAC 1 cut(s) 657
HindIII AAGCTT 1 cut(s) 337
HinfI GANTC 4 cut(s) 141, 235, 433, 733
HpaI GTTAAC 1 cut(s) 657
HpaII CCGG 1 cut(s) 689
Hpy166II GTNNAC 1 cut(s) 657
Hpy188I TCNGA 6 cut(s) 252, 348, 521, 579, 817, 949
Hpy188III TCNNGA 7 cut(s) 62, 108, 419, 569, 737, 772, 841
Hpy8I GTNNAC 1 cut(s) 657
HpyAV CCTTC 3 cut(s) 116, 127, 173
HpyCH4III ACNGT 1 cut(s) 643
HpyF10VI GCNNNNNNNGC 3 cut(s) 491, 636, 826
HpyF3I CTNAG 4 cut(s) 570, 729, 748, 823
Hsp92II CATG 7 cut(s) 20, 176, 310, 404, 422, 680, 868
HspAI GCGC 1 cut(s) 552
KspAI GTTAAC 1 cut(s) 657
Kzo9I GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
LmnI GCTCC 5 cut(s) 310, 503, 571, 627, 729
Lsp1109I GCAGC 1 cut(s) 561
LweI GCATC 3 cut(s) 12, 460, 745
MalI GATC 7 cut(s) 112, 328, 481, 709, 788, 801, 951
MbiI CCGCTC 1 cut(s) 506
MboI GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
MboII GAAGA 4 cut(s) 96, 359, 389, 407
MflI RGATCY 3 cut(s) 110, 326, 479
MhlI GDGCHC 2 cut(s) 822, 831
MluCI AATT 4 cut(s) 35, 52, 81, 916
MlyI GAGTC 1 cut(s) 244
MnlI CCTC 7 cut(s) 182, 186, 317, 330, 565, 837, 869
MroXI GAANNNNTTC 2 cut(s) 140, 896
MseI TTAA 5 cut(s) 243, 408, 534, 656, 888
MspA1I CMGCKG 1 cut(s) 617
MspCI CTTAAG 2 cut(s) 407, 887
MspI CCGG 1 cut(s) 689
MspR9I CCNGG 2 cut(s) 545, 661
MssI GTTTAAAC 1 cut(s) 244
MvaI CCWGG 2 cut(s) 545, 661
MwoI GCNNNNNNNGC 3 cut(s) 491, 636, 826
NdeII GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
NlaIII CATG 7 cut(s) 20, 176, 310, 404, 422, 680, 868
NlaIV GGNNCC 3 cut(s) 328, 629, 880
NspI RCATGY 1 cut(s) 868
NspV TTCGAA 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 321
PagI TCATGA 1 cut(s) 418
PdmI GAANNNNTTC 2 cut(s) 140, 896
PfeI GAWTC 3 cut(s) 141, 433, 733
PkrI GCNGC 2 cut(s) 551, 849
PleI GAGTC 1 cut(s) 243
PmeI GTTTAAAC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 243
Psp124BI GAGCTC 1 cut(s) 822
Psp6I CCWGG 2 cut(s) 543, 659
PspGI CCWGG 2 cut(s) 543, 659
PspN4I GGNNCC 3 cut(s) 328, 629, 880
PspXI VCTCGAGB 1 cut(s) 321
PstNI CAGNNNCTG 2 cut(s) 91, 569
PsuI RGATCY 3 cut(s) 110, 326, 479
PvuII CAGCTG 1 cut(s) 617
RsaI GTAC 1 cut(s) 318
RsaNI GTAC 1 cut(s) 317
SacI GAGCTC 1 cut(s) 822
SaqAI TTAA 5 cut(s) 243, 408, 534, 656, 888
SatI GCNGC 2 cut(s) 550, 848
Sau3AI GATC 7 cut(s) 110, 326, 479, 707, 786, 799, 949
SchI GAGTC 1 cut(s) 244
ScrFI CCNGG 2 cut(s) 545, 661
SduI GDGCHC 2 cut(s) 822, 831
SfaNI GCATC 3 cut(s) 12, 460, 745
Sfr274I CTCGAG 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 120
SlaI CTCGAG 1 cut(s) 321
SmlI CTYRAG 5 cut(s) 321, 407, 474, 841, 887
SmoI CTYRAG 5 cut(s) 321, 407, 474, 841, 887
Sse9I AATT 4 cut(s) 35, 52, 81, 916
SsiI CCGC 2 cut(s) 506, 847
SspI AATATT 1 cut(s) 266
SstI GAGCTC 1 cut(s) 822
StyD4I CCNGG 2 cut(s) 543, 659
StyI CCWWGG 4 cut(s) 598, 631, 851, 869
TaaI ACNGT 1 cut(s) 643
TaqI TCGA 3 cut(s) 120, 187, 322
TasI AATT 4 cut(s) 35, 52, 81, 916
TauI GCSGC 1 cut(s) 850
TfiI GAWTC 3 cut(s) 141, 433, 733
Tru1I TTAA 5 cut(s) 243, 408, 534, 656, 888
Tru9I TTAA 5 cut(s) 243, 408, 534, 656, 888
TscAI CASTG 2 cut(s) 756, 814
TseI GCWGC 1 cut(s) 549
TspDTI ATGAA 8 cut(s) 65, 192, 295, 300, 389, 407, 539, 757
TspGWI ACGGA 2 cut(s) 153, 871
TspRI CASTG 2 cut(s) 756, 814
Vha464I CTTAAG 2 cut(s) 407, 887
XapI RAATTY 4 cut(s) 35, 52, 81, 916
XceI RCATGY 1 cut(s) 868
XhoI CTCGAG 1 cut(s) 321
XmnI GAANNNNTTC 2 cut(s) 140, 896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.