Rmu_sc0008957.1_g000002

Mitogen-activated protein kinase kinase kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008957.1
OG0000243
Physical Location & Seq
Forward (+)
4048 .. 10104
6057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008957.1_g000002.1.cds

Sequence Viewer

Length: 2397 bp
atgtgggatctgaatgagcctcctaatcagggacgcgtggaggacgacggcaccacctcggccgactgcaacggaaaaagtggctgcaagatattcggggtctggttcacggacattgctgattcgcaacccgtgacccgacggttcttcccggtagatgtatcctccgaaatggaactcacgcctggaggtggtgtcgccgccgggccggttgcttcttcctcttcttcatcatcaactgttcagtggaagtgtgattcaccttttcagtggaagtatgatgtgttcttgagtttcaggggtccagacactcgaaggagtatcacatcttatctatactatcgactgcagaggaggggaattaaaacattcatggatgatccagatcttcaagtaggggatgtgatttctcccgctctcctaaaggcaattgaaggatcaaggtttgcaattgttgttctgtcggaaaactatgctcattctacttggtgtttggaggaacttacaaagatttgtgagtgcatggaaggaagcaacagaattttcccacttttttataatgtggaaccatctgatgtacggtaccaaacgaagagtttcggagaagcttttaataagcatgcaagctatgggcgacacacattacagaatgtgcggcggtggaatgatgctttaaacaaagtggcatatgaagctacaagaaaagccatagatgaggttatgaaggcgctaaaagataaagatgacgaggtcactgcggatggtgtgcgaggcgtcggcaagacaaccatggtaaaacacgtcgctgcacaatcctgcaaaaatgggacttctcatcatgtgattatggctgttgtatcccagagccctgacttgacaaaaattcaaggcacattggcggggccgagcgggtgttgtactgcaaatagtagttgtagtgcaagtatcggaattaagggagcgcggcggctggggctgaagccgccgccgtcaatggtgagggttccggtgattgacaatggatgctcgacttgggacattttgagggacttcgcgccaaaagaagagagggaaatggtgcagagaaggtttggttccttttcctcgtcttcttctgatgaagaagaagaactagaagaagaagttgaagaaggagaggatgttgacttttccagcactaccacagagatttccagtacggcagagatttccagtatttctccaaatggaaggttttcgccgaatgggaagcctaagcttattgtcactaattgggaaaagggtgatttgctcggcagcggctcttttgggtctgtgtatgaaggaatttctgatggcggatgcttcattgctgtcaaggaagtttccttgcttgatcaaggaagcctggggaggcaaagagtttctcaacttgaacaggagattgctcttctgagtcagtttgaacatgagaacatagttcagtattatggcacacaaaagataatcgtaaacatgcttgtccacactgttatgcatttgtttgaggggttaccttatcatctagtgtccatactatatgatacttctgttcgagatggatcaaagctctatatctttctggaacttgtaaccaaaggctcccttcaaaagctatatcaaacgtacactcttactgattcaattgtttctgtatacactagacagatcttgcaaggtctgaagtatcttcacgaccgaaaagtgattcacagggacattaaatgtgcaaatcttttggtgcatgctaatggatctgtgaagcttgctgactttggattggcaaagattatcaaaatgaacgatataaaatcttgccaaggaactgcatactggatggcccctgaggttgttaatcgtaagtgtcaaggttatggccttccagctgatatatggagtcttggatgtactgtgttggagatgttaactgggatggttccatacgataatctcgaatggataagggcattatggaaaattggaaagggggagccccctctggttcctgattctctttcaagagaggcacaagatttcatccgtctatgcttacaacgtgagccagataatcgtcccactgctgctcagcttttaaaacatccatttgtaaataagccccttcctcccacctcttctggatcagtatctccttacaatcaccacaggcagggtcaaaagatttattcagctataagttgtgttggtaataaggtttctgggcagcgacctgacctgcaactgcaaccggacatgcagcgctacaacctcatcgccggcaactccacccaactgcagacaggtccgtccgacccctggcctccgtccggcatgctccgttgcgccccgagccgagctgctgcgtcgccgtccgcactttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000186 GO:0001101 GO:0001932 GO:0001934 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007275 GO:0007346 GO:0007584 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009605 GO:0009611 GO:0009628 GO:0009631 GO:0009651 GO:0009888 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010449 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0012505 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0022622 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0031098 GO:0031323 GO:0031325 GO:0031347 GO:0031399 GO:0031401 GO:0031410 GO:0031667 GO:0031982 GO:0032147 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0033554 GO:0033674 GO:0035266 GO:0035556 GO:0036211 GO:0040007 GO:0042221 GO:0042325 GO:0042327 GO:0042493 GO:0043085 GO:0043170 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048364 GO:0048507 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071900 GO:0071902 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0097708 GO:0099402 GO:0140096 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902065 GO:1902531 GO:1902533
KEGG Pathways
Metabolic & Signaling
ko04016 ko04626 map04016 map04626
Pfam Domains
Protein Families
Pkinase

Protein Analysis

798

Amino Acids

88.23

Weight (kDa)

6.29

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000243)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G08470 AT4G08470 AT4G08470 AT4G08480 AT4G08500
fragaria_vesca FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_2g26162 FvH4_3g43920 FvH4_3g44020 FvH4_5g29850 FvH4_5g38970
malus_domestica MD02G1097900.v1.1 MD08G1173000.v1.1 MD08G1227000.v1.1 MD15G1358300.v1.1 MD15G1419300.v1.1
prunus_persica Prupe.1G505700_v2.0.a1 Prupe.1G505700_v2.0.a1 Prupe.1G505800_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.1G564100_v2.0.a1 Prupe.7G007900_v2.0.a1
pyrus_communis pycom08g14750 pycom08g19800 pycom15g32060 pycom15g37220
rosa_chinensis RchiOBHm_Chr1g0352161 RchiOBHm_Chr5g0079491 RchiOBHm_Chr5g0080131 RchiOBHm_Chr5g0080301 RchiOBHm_Chr6g0294571 RchiOBHm_Chr6g0294581 RchiOBHm_Chr7g0223451 RchiOBHm_Chr7g0240941
rosa_laevigata RLG00000000612 RLG00000001964 RLG00000011858 RLG00000011859 RLG00000013468 RLG00000028354 RLG00000035064 RLG00000035074 RLG00000036819 RLG00000036822 RLG00000036849
rosa_multiflora Rmu_co7998012.1_g000001 Rmu_co8188232.1_g000001 Rmu_sc0001324.1_g000001 Rmu_sc0001599.1_g000021 Rmu_sc0006084.1_g000016 Rmu_sc0006264.1_g000020 Rmu_sc0007408.1_g000005 Rmu_sc0007806.1_g000004 Rmu_sc0008749.1_g000001 Rmu_sc0008957.1_g000002 Rmu_sc0011551.1_g000001
rosa_roxburghii Rroxscaffold_1G00003460 Rroxscaffold_3G00219400 Rroxscaffold_3G00235690 Rroxscaffold_4G00303130 Rroxscaffold_5G00380490 Rroxscaffold_7G00173210 Rroxscaffold_7G00173220
rosa_rugosa Rorug01G0225400 Rorug01G0225500 Rorug01G0225600 Rorug05G0464600 Rorug05G0464700 Rorug05G0465900 Rorug05G0467900 Rorug06G0246100 Rorug06G0246100 Rorug07G0217300 Rorug07G0217300 Rorug07G0340500
rosa_samantha Rh1AG239500 Rh1CG223900 Rh2CG299500 Rh2DG336700 Rh4BG236600 Rh5AG516900 Rh5AG517500 Rh5AG517700 Rh5AG518100 Rh5AG518500 Rh5AG519700 Rh5BG540800 Rh5CG563500 Rh5CG563700 Rh5DG038200 Rh6AG358400 Rh6BG365200 Rh6BG365300 Rh6BG365500 Rh7AG360500 Rh7AG495500 Rh7BG351100 Rh7BG466800 Rh7CG379000 Rh7CG379100 Rh7CG513000 Rh7DG356000
rosa_wichuraiana Rw0G023410 Rw1G020800 Rw5G048120 Rw5G048230 Rw5G048280 Rw5G048440 Rw6G031270 Rw7G029910 Rw7G030670 Rw7G041870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 558
AasI GACNNNNNNGTC 1 cut(s) 2320
Acc36I ACCTGC 1 cut(s) 2259
Acc65I GGTACC 1 cut(s) 582
AccB1I GGYRCC 2 cut(s) 50, 582
AccBSI CCGCTC 2 cut(s) 416, 909
AccI GTMKAC 1 cut(s) 1674
AccII CGCG 3 cut(s) 36, 964, 1055
AclWI GGATC 6 cut(s) 15, 374, 445, 1588, 1780, 2164
AcoI YGGCCR 1 cut(s) 60
AcsI RAATTY 3 cut(s) 540, 882, 1326
AcuI CTGAAG 2 cut(s) 998, 1721
AcyI GRCGYC 1 cut(s) 774
AfaI GTAC 6 cut(s) 579, 584, 919, 1198, 1646, 1927
AfeI AGCGCT 1 cut(s) 2276
AfiI CCNNNNNNNGG 5 cut(s) 29, 191, 2185, 2331, 2342
AflIII ACRYGT 2 cut(s) 34, 799
AgsI TTSAA 9 cut(s) 392, 434, 887, 1148, 1415, 1445, 1628, 1662, 2037
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 3 cut(s) 184, 1386, 2330
AlwI GGATC 6 cut(s) 15, 374, 445, 1588, 1780, 2164
Ama87I CYCGRG 1 cut(s) 2362
Aor51HI AGCGCT 1 cut(s) 2276
AoxI GGCC 6 cut(s) 60, 206, 902, 1857, 1894, 2333
ApeKI GCWGC 8 cut(s) 84, 806, 1296, 2099, 2239, 2272, 2372, 2375
ApoI RAATTY 3 cut(s) 540, 882, 1326
Asp700I GAANNNNTTC 2 cut(s) 596, 1234
Asp718I GGTACC 1 cut(s) 582
AspLEI GCGC 5 cut(s) 730, 964, 1057, 2277, 2360
AspS9I GGNCC 5 cut(s) 206, 302, 902, 1858, 2318
AsuC2I CCSGG 2 cut(s) 152, 205
AsuHPI GGTGA 5 cut(s) 252, 1009, 1021, 1295, 2168
AvaI CYCGRG 1 cut(s) 2362
AvaII GGWCC 2 cut(s) 302, 2318
AxyI CCTNAGG 1 cut(s) 1863
BaeI ACNNNNGTAYC 2 cut(s) 1554, 1587
BanI GGYRCC 2 cut(s) 50, 582
BanII GRGCYC 2 cut(s) 869, 2013
BbsI GAAGAC 1 cut(s) 1101
BbvI GCAGC 8 cut(s) 71, 793, 1308, 2086, 2251, 2284, 2359, 2362
BccI CCATC 6 cut(s) 577, 755, 1328, 1571, 1849, 1945
BceAI ACGGC 4 cut(s) 64, 973, 1215, 2368
BcgI CGANNNNNNTGC 4 cut(s) 76, 110, 737, 771
BciT130I CCWGG 3 cut(s) 186, 1388, 2332
BciVI GTATCC 2 cut(s) 172, 868
BclI TGATCA 1 cut(s) 1375
BcnI CCSGG 2 cut(s) 152, 205
BfaI CTAG 3 cut(s) 1133, 1544, 1680
BfmI CTRYAG 2 cut(s) 347, 2309
BfoI RGCGCY 2 cut(s) 731, 2278
BfuAI ACCTGC 1 cut(s) 2259
BfuI GTATCC 2 cut(s) 172, 868
BglII AGATCT 2 cut(s) 385, 1686
BlpI GCTNAGC 1 cut(s) 2103
Bme1390I CCNGG 5 cut(s) 152, 186, 205, 1388, 2332
Bme18I GGWCC 2 cut(s) 302, 2318
BmeT110I CYCGRG 1 cut(s) 2362
BmgBI CACGTC 1 cut(s) 802
BmgT120I GGNCC 5 cut(s) 206, 302, 902, 1858, 2318
BmrFI CCNGG 5 cut(s) 152, 186, 205, 1388, 2332
BmrI ACTGGG 1 cut(s) 1956
BmsI GCATC 3 cut(s) 658, 1013, 1331
BmuI ACTGGG 1 cut(s) 1956
BpiI GAAGAC 1 cut(s) 1101
BpmI CTGGAG 1 cut(s) 207
Bpu10I CCTNAGC 1 cut(s) 1254
Bpu1102I GCTNAGC 1 cut(s) 2103
BpuEI CTTGAG 1 cut(s) 310
BpuMI CCSGG 2 cut(s) 152, 205
BsaBI GATNNNNATC 2 cut(s) 384, 2161
BsaHI GRCGYC 1 cut(s) 774
BsaJI CCNNGG 5 cut(s) 57, 789, 1387, 1837, 2330
BsaWI WCCGGW 2 cut(s) 1006, 2263
BsaXI ACNNNNNCTCC 4 cut(s) 180, 210, 1146, 1176
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 191, 2185, 2331, 2342
Bse118I RCCGGY 2 cut(s) 208, 2291
Bse1I ACTGG 4 cut(s) 1194, 1212, 1856, 1951
Bse21I CCTNAGG 1 cut(s) 1863
Bse3DI GCAATG 2 cut(s) 114, 1347
Bse8I GATNNNNATC 2 cut(s) 384, 2161
BseBI CCWGG 3 cut(s) 186, 1388, 2332
BseDI CCNNGG 5 cut(s) 57, 789, 1387, 1837, 2330
BseJI GATNNNNATC 2 cut(s) 384, 2161
BseLI CCNNNNNNNGG 5 cut(s) 29, 191, 2185, 2331, 2342
BseMI GCAATG 2 cut(s) 114, 1347
BseMII CTCAG 3 cut(s) 1424, 1854, 2117
BseNI ACTGG 4 cut(s) 1194, 1212, 1856, 1951
BseRI GAGGAG 1 cut(s) 367
BseX3I CGGCCG 1 cut(s) 60
BseXI GCAGC 8 cut(s) 71, 793, 1308, 2086, 2251, 2284, 2359, 2362
BseYI CCCAGC 1 cut(s) 970
BsgI GTGCAG 2 cut(s) 792, 1100
Bsh1236I CGCG 3 cut(s) 36, 964, 1055
Bsh1285I CGRYCG 2 cut(s) 63, 1717
BshFI GGCC 6 cut(s) 62, 208, 904, 1859, 1896, 2335
BshNI GGYRCC 2 cut(s) 50, 582
BsiEI CGRYCG 2 cut(s) 63, 1717
BsiHKCI CYCGRG 1 cut(s) 2362
BsiSI CCGG 7 cut(s) 152, 204, 209, 1007, 2264, 2292, 2343
BslFI GGGAC 6 cut(s) 45, 841, 1049, 1061, 1748, 2076
BslI CCNNNNNNNGG 5 cut(s) 29, 191, 2185, 2331, 2342
BsmFI GGGAC 6 cut(s) 45, 841, 1049, 1061, 1748, 2076
BsnI GGCC 6 cut(s) 62, 208, 904, 1859, 1896, 2335
BsoBI CYCGRG 1 cut(s) 2362
Bsp1286I GDGCHC 2 cut(s) 869, 2013
Bsp143I GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
Bsp1720I GCTNAGC 1 cut(s) 2103
Bsp19I CCATGG 1 cut(s) 789
BspANI GGCC 6 cut(s) 62, 208, 904, 1859, 1896, 2335
BspCNI CTCAG 3 cut(s) 1425, 1855, 2116
BspFNI CGCG 3 cut(s) 36, 964, 1055
BspMAI CTGCAG 2 cut(s) 351, 2313
BspMI ACCTGC 1 cut(s) 2259
BspPI GGATC 6 cut(s) 15, 374, 445, 1588, 1780, 2164
BspQI GCTCTTC 1 cut(s) 1434
BspT107I GGYRCC 2 cut(s) 50, 582
BsrBI CCGCTC 2 cut(s) 416, 909
BsrDI GCAATG 2 cut(s) 114, 1347
BsrFI RCCGGY 2 cut(s) 208, 2291
BsrI ACTGG 4 cut(s) 1194, 1212, 1856, 1951
BssAI RCCGGY 2 cut(s) 208, 2291
BssECI CCNNGG 5 cut(s) 57, 789, 1387, 1837, 2330
BssMI GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
BssNAI GTATAC 1 cut(s) 1675
BssNI GRCGYC 1 cut(s) 774
BssT1I CCWWGG 2 cut(s) 789, 1837
Bst1107I GTATAC 1 cut(s) 1675
Bst2UI CCWGG 3 cut(s) 186, 1388, 2332
Bst4CI ACNGT 5 cut(s) 144, 241, 582, 1510, 1930
Bst6I CTCTTC 5 cut(s) 229, 587, 1059, 1434, 2155
BstACI GRCGYC 1 cut(s) 774
BstC8I GCNNGC 6 cut(s) 621, 625, 1764, 1785, 2293, 2348
BstDEI CTNAG 4 cut(s) 1254, 1433, 1863, 2103
BstDSI CCRYGG 1 cut(s) 789
BstEII GGTNACC 1 cut(s) 1530
BstFNI CGCG 3 cut(s) 36, 964, 1055
BstH2I RGCGCY 2 cut(s) 731, 2278
BstHHI GCGC 5 cut(s) 730, 964, 1057, 2277, 2360
BstKTI GATC 9 cut(s) 10, 382, 388, 440, 1378, 1583, 1689, 1775, 2159
BstMBI GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
BstMCI CGRYCG 2 cut(s) 63, 1717
BstMWI GCNNNNNNNGC 4 cut(s) 692, 973, 982, 2364
BstNI CCWGG 3 cut(s) 186, 1388, 2332
BstNSI RCATGY 5 cut(s) 623, 1498, 1766, 2272, 2350
BstPI GGTNACC 1 cut(s) 1530
BstSCI CCNGG 5 cut(s) 150, 184, 203, 1386, 2330
BstSFI CTRYAG 2 cut(s) 347, 2309
BstUI CGCG 3 cut(s) 36, 964, 1055
BstV1I GCAGC 8 cut(s) 71, 793, 1308, 2086, 2251, 2284, 2359, 2362
BstV2I GAAGAC 1 cut(s) 1101
BstX2I RGATCY 4 cut(s) 7, 385, 1686, 1772
BstYI RGATCY 4 cut(s) 7, 385, 1686, 1772
BstZ17I GTATAC 1 cut(s) 1675
BstZI CGGCCG 1 cut(s) 60
Bsu36I CCTNAGG 1 cut(s) 1863
BsuI GTATCC 2 cut(s) 172, 868
BsuRI GGCC 6 cut(s) 62, 208, 904, 1859, 1896, 2335
BtgI CCRYGG 1 cut(s) 789
BtgZI GCGATG 1 cut(s) 2272
BtrI CACGTC 1 cut(s) 802
BtsI GCAGTG 2 cut(s) 753, 2094
BtsIMutI CAGTG 5 cut(s) 251, 275, 753, 1506, 2094
BveI ACCTGC 1 cut(s) 2259
Cac8I GCNNGC 6 cut(s) 621, 625, 1764, 1785, 2293, 2348
CfoI GCGC 5 cut(s) 730, 964, 1057, 2277, 2360
Cfr10I RCCGGY 2 cut(s) 208, 2291
Cfr13I GGNCC 5 cut(s) 206, 302, 902, 1858, 2318
CseI GACGC 3 cut(s) 42, 763, 2367
Csp6I GTAC 6 cut(s) 578, 583, 918, 1197, 1645, 1926
CviQI GTAC 6 cut(s) 578, 583, 918, 1197, 1645, 1926
DdeI CTNAG 4 cut(s) 1254, 1433, 1863, 2103
DpnI GATC 9 cut(s) 9, 381, 387, 439, 1377, 1582, 1688, 1774, 2158
DpnII GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
DraI TTTAAA 2 cut(s) 675, 2112
DrdI GACNNNNNNGTC 1 cut(s) 2320
DseDI GACNNNNNNGTC 1 cut(s) 2320
EaeI YGGCCR 1 cut(s) 60
EagI CGGCCG 1 cut(s) 60
Eam1104I CTCTTC 5 cut(s) 229, 587, 1059, 1434, 2155
EarI CTCTTC 5 cut(s) 229, 587, 1059, 1434, 2155
EciI GGCGGA 1 cut(s) 1353
EclXI CGGCCG 1 cut(s) 60
Eco130I CCWWGG 2 cut(s) 789, 1837
Eco24I GRGCYC 2 cut(s) 869, 2013
Eco47I GGWCC 2 cut(s) 302, 2318
Eco47III AGCGCT 1 cut(s) 2276
Eco52I CGGCCG 1 cut(s) 60
Eco57I CTGAAG 2 cut(s) 998, 1721
Eco81I CCTNAGG 1 cut(s) 1863
Eco88I CYCGRG 1 cut(s) 2362
Eco91I GGTNACC 1 cut(s) 1530
EcoO65I GGTNACC 1 cut(s) 1530
EcoRII CCWGG 3 cut(s) 184, 1386, 2330
EcoT14I CCWWGG 2 cut(s) 789, 1837
EcoT22I ATGCAT 1 cut(s) 1518
EcoT38I GRGCYC 2 cut(s) 869, 2013
ErhI CCWWGG 2 cut(s) 789, 1837
FalI AAGNNNNNCTT 2 cut(s) 1608, 1640
FaqI GGGAC 6 cut(s) 45, 841, 1049, 1061, 1748, 2076
FauI CCCGC 3 cut(s) 421, 892, 902
FauNDI CATATG 1 cut(s) 688
FbaI TGATCA 1 cut(s) 1375
FblI GTMKAC 1 cut(s) 1674
FriOI GRGCYC 2 cut(s) 869, 2013
FspBI CTAG 3 cut(s) 1133, 1544, 1680
GlaI GCGC 5 cut(s) 729, 963, 1056, 2276, 2359
GsaI CCCAGC 1 cut(s) 974
GsuI CTGGAG 1 cut(s) 207
HaeII RGCGCY 2 cut(s) 731, 2278
HaeIII GGCC 6 cut(s) 62, 208, 904, 1859, 1896, 2335
HapII CCGG 7 cut(s) 152, 204, 209, 1007, 2264, 2292, 2343
HgaI GACGC 3 cut(s) 42, 763, 2367
HhaI GCGC 5 cut(s) 730, 964, 1057, 2277, 2360
Hin1I GRCGYC 1 cut(s) 774
Hin6I GCGC 5 cut(s) 728, 962, 1055, 2275, 2358
HinP1I GCGC 5 cut(s) 728, 962, 1055, 2275, 2358
HincII GTYRAC 2 cut(s) 1165, 1944
HindII GTYRAC 2 cut(s) 1165, 1944
HindIII AAGCTT 3 cut(s) 606, 1256, 1781
HinfI GANTC 7 cut(s) 122, 257, 1435, 1658, 1726, 1915, 2027
HpaI GTTAAC 1 cut(s) 1944
HpaII CCGG 7 cut(s) 152, 204, 209, 1007, 2264, 2292, 2343
HphI GGTGA 5 cut(s) 252, 1009, 1021, 1295, 2168
Hpy166II GTNNAC 7 cut(s) 108, 1165, 1492, 1504, 1647, 1675, 1944
Hpy8I GTNNAC 7 cut(s) 108, 1165, 1492, 1504, 1647, 1675, 1944
Hpy99I CGWCG 5 cut(s) 50, 144, 779, 806, 2383
HpyCH4III ACNGT 5 cut(s) 144, 241, 582, 1510, 1930
HpyCH4IV ACGT 3 cut(s) 801, 1643, 2074
HpyF10VI GCNNNNNNNGC 4 cut(s) 692, 973, 982, 2364
HpyF3I CTNAG 4 cut(s) 1254, 1433, 1863, 2103
HpySE526I ACGT 3 cut(s) 801, 1643, 2074
Hsp92I GRCGYC 1 cut(s) 774
HspAI GCGC 5 cut(s) 728, 962, 1055, 2275, 2358
KpnI GGTACC 1 cut(s) 586
KroI GCCGGC 1 cut(s) 2291
KroNI GCCGGC 1 cut(s) 2293
Ksp22I TGATCA 1 cut(s) 1375
KspAI GTTAAC 1 cut(s) 1944
Kzo9I GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
LguI GCTCTTC 1 cut(s) 1434
LmnI GCTCC 4 cut(s) 959, 1625, 2008, 2355
Lsp1109I GCAGC 8 cut(s) 71, 793, 1308, 2086, 2251, 2284, 2359, 2362
LweI GCATC 3 cut(s) 658, 1013, 1331
MaeI CTAG 3 cut(s) 1133, 1544, 1680
MaeII ACGT 3 cut(s) 801, 1643, 2074
MaeIII GTNAC 5 cut(s) 133, 751, 1264, 1530, 1609
MalI GATC 9 cut(s) 9, 381, 387, 439, 1377, 1582, 1688, 1774, 2158
MbiI CCGCTC 2 cut(s) 416, 909
MboI GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
MfeI CAATTG 3 cut(s) 429, 450, 1662
MflI RGATCY 4 cut(s) 7, 385, 1686, 1772
MhlI GDGCHC 2 cut(s) 869, 2013
MluI ACGCGT 1 cut(s) 34
MlyI GAGTC 2 cut(s) 1444, 1924
MmeI TCCRAC 3 cut(s) 444, 1914, 2349
Mph1103I ATGCAT 1 cut(s) 1518
MroNI GCCGGC 1 cut(s) 2291
MroXI GAANNNNTTC 2 cut(s) 596, 1234
MseI TTAA 8 cut(s) 363, 612, 674, 954, 1740, 1872, 1943, 2111
MslI CAYNNNNRTG 2 cut(s) 1511, 1767
MspA1I CMGCKG 2 cut(s) 1299, 1904
MspI CCGG 7 cut(s) 152, 204, 209, 1007, 2264, 2292, 2343
MspR9I CCNGG 5 cut(s) 152, 186, 205, 1388, 2332
MunI CAATTG 3 cut(s) 429, 450, 1662
MvaI CCWGG 3 cut(s) 186, 1388, 2332
MvnI CGCG 3 cut(s) 36, 964, 1055
MwoI GCNNNNNNNGC 4 cut(s) 692, 973, 982, 2364
NaeI GCCGGC 1 cut(s) 2293
NciI CCSGG 2 cut(s) 152, 205
NcoI CCATGG 1 cut(s) 789
NdeI CATATG 1 cut(s) 688
NdeII GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
NgoMIV GCCGGC 1 cut(s) 2291
NmeAIII GCCGAG 4 cut(s) 38, 930, 1272, 2393
NmuCI GTSAC 3 cut(s) 133, 751, 1264
NsiI ATGCAT 1 cut(s) 1518
NspI RCATGY 5 cut(s) 623, 1498, 1766, 2272, 2350
PaeI GCATGC 3 cut(s) 623, 1766, 2350
PciSI GCTCTTC 1 cut(s) 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 1968
PdiI GCCGGC 1 cut(s) 2293
PdmI GAANNNNTTC 2 cut(s) 596, 1234
PfeI GAWTC 5 cut(s) 122, 257, 1658, 1726, 2027
PflFI GACNNNGTC 1 cut(s) 749
PleI GAGTC 2 cut(s) 1443, 1923
PpsI GAGTC 2 cut(s) 1443, 1923
PsiI TTATAA 1 cut(s) 558
Psp6I CCWGG 3 cut(s) 184, 1386, 2330
PspEI GGTNACC 1 cut(s) 1530
PspFI CCCAGC 1 cut(s) 970
PspGI CCWGG 3 cut(s) 184, 1386, 2330
PspPI GGNCC 5 cut(s) 206, 302, 902, 1858, 2318
PsrI GAACNNNNNNTAC 2 cut(s) 269, 301
PstI CTGCAG 2 cut(s) 351, 2313
PsuI RGATCY 4 cut(s) 7, 385, 1686, 1772
PsyI GACNNNGTC 1 cut(s) 749
PvuII CAGCTG 1 cut(s) 1904
RsaI GTAC 6 cut(s) 579, 584, 919, 1198, 1646, 1927
RsaNI GTAC 6 cut(s) 578, 583, 918, 1197, 1645, 1926
RseI CAYNNNNRTG 2 cut(s) 1511, 1767
SapI GCTCTTC 1 cut(s) 1434
SaqAI TTAA 8 cut(s) 363, 612, 674, 954, 1740, 1872, 1943, 2111
Sau3AI GATC 9 cut(s) 7, 379, 385, 437, 1375, 1580, 1686, 1772, 2156
Sau96I GGNCC 5 cut(s) 206, 302, 902, 1858, 2318
SchI GAGTC 2 cut(s) 1444, 1924
ScrFI CCNGG 5 cut(s) 152, 186, 205, 1388, 2332
SduI GDGCHC 2 cut(s) 869, 2013
SfaNI GCATC 3 cut(s) 658, 1013, 1331
SfcI CTRYAG 2 cut(s) 347, 2309
SinI GGWCC 2 cut(s) 302, 2318
SmiMI CAYNNNNRTG 2 cut(s) 1511, 1767
SmlI CTYRAG 1 cut(s) 289
SmoI CTYRAG 1 cut(s) 289
SphI GCATGC 3 cut(s) 623, 1766, 2350
SspMI CTAG 3 cut(s) 1133, 1544, 1680
StyD4I CCNGG 5 cut(s) 150, 184, 203, 1386, 2330
StyI CCWWGG 2 cut(s) 789, 1837
TaaI ACNGT 5 cut(s) 144, 241, 582, 1510, 1930
TaiI ACGT 3 cut(s) 804, 1646, 2077
TaqI TCGA 5 cut(s) 313, 343, 1028, 1573, 1971
TaqII GACCGA 1 cut(s) 1731
TatI WGTACW 2 cut(s) 917, 1925
TauI GCSGC 7 cut(s) 203, 658, 967, 970, 985, 988, 1302
TfiI GAWTC 5 cut(s) 122, 257, 1658, 1726, 2027
Tru1I TTAA 8 cut(s) 363, 612, 674, 954, 1740, 1872, 1943, 2111
Tru9I TTAA 8 cut(s) 363, 612, 674, 954, 1740, 1872, 1943, 2111
TscAI CASTG 5 cut(s) 251, 275, 760, 1513, 2101
TseFI GTSAC 3 cut(s) 133, 751, 1264
TseI GCWGC 8 cut(s) 84, 806, 1296, 2099, 2239, 2272, 2372, 2375
Tsp45I GTSAC 3 cut(s) 133, 751, 1264
TspDTI ATGAA 9 cut(s) 219, 361, 705, 737, 1134, 1335, 1336, 1832, 2044
TspGWI ACGGA 6 cut(s) 87, 125, 2048, 2310, 2328, 2342
TspRI CASTG 5 cut(s) 251, 275, 760, 1513, 2101
Tth111I GACNNNGTC 1 cut(s) 749
VpaK11BI GGWCC 2 cut(s) 302, 2318
XapI RAATTY 3 cut(s) 540, 882, 1326
XceI RCATGY 5 cut(s) 623, 1498, 1766, 2272, 2350
XcmI CCANNNNNNNNNTGG 1 cut(s) 1908
XmiI GTMKAC 1 cut(s) 1674
XmnI GAANNNNTTC 2 cut(s) 596, 1234
XspI CTAG 3 cut(s) 1133, 1544, 1680
Zsp2I ATGCAT 1 cut(s) 1518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.