Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Reverse (-)

32266121 .. 32268912

Gene Structure 2792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1235100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGAAGATTTTAATTAGCTTGAAACTTGTAGTCGGCTTGTTATTAGCTACTGTTGGCATCTTCCATTGCCAAGCTTCGCCTCCTCGCTACACTTTTGTGGTGGAAGAAACTCCATACAAACGACTGTGTAGCACAAAGAACATCTTGACTGTAAACGGCCAGTTTCCCGGACCAACGTTGTATGTTCATGCTGGAGATACTATCGTAGTGGATATCTATAACAAGGGCAATCGTAACATTACCATCCACTGGCATGGAGTTAAGCAACTGAGGAATCCATGGTCAGACGGTCCTGATTACATCACGCAATGTCCTATTCAACCAGGAGCCAGGTTTACCCAAACCATTATATTTTCCTCAGAGGAAGGGACTCTATGGTGGCATGCTCACAGCCAGTGGGATCGAGCCACCGTCCACGGTGCTATAGTCATATACCCCAAGAAGGGAGCCACTTACCCTTTTCCCAAACCTCACGCTGAATTTCCAATCATCTTGGGAGAGTGGTGGAAGGAAGATATCGGACAACTTTACAATGAAACCATTCAAAGCGGAGCGGACGCTAATGCTTCAAATGCTTTCCTCATCAATGGTCAACCCGGCGATCTCTATCCTTGCTCAAAACCAGACACATTTAAGCTCAAAGTTGATTACGGCAAAACCTACCTGCTCAGATTAATCAACTCCGCCGTGCAAGTGATGACGTTTTTCGCCATTGCTAATCACAACGTCACGGTTGTAGGCTCAGATGCTAGCTACACCAAGCCATTTTCAACAGATTATGTGACCATATCTCCCGGCCAAACCATTGACCTCTTGTTAAATGCCGACCAAATCCCCAATAACTACTACATTGCTGCAAAAGCCTACGTTGGCGGGGTTGGGATTCCCACCGACAACACAACCGCCACTGCCATACTCCAATACCACGGAAATTTTAGTTCATCTCCTACTTCTTTGCCTAATATTCCTTCCCATAACAACACCAACGCATCGGTTCACTTTACCAGTAAACTCAAAAGCTTGGCTGATAAAAACCACCCCGTTGACGTGCCACAAATGATTACAACTCCTTTGTTCTTTACAATCTCCGTCAACTTACTACCCTGCCCGAATAATTCATGTGCTGGGCCTAATGGGACTCGTTTTGCCGCCAGTGTCAACAACATTAGCTTTGTCAACCCCACCATTGACATATTGCAAGCTTACTATTACCATGTGAATGGGGTATTTGGAACTCGCTTTCCAAATTTCCCTCCCTTGCTATTTAATTTTACAGCTCCGAACTTGCCGTTGTACCTACTCCCAACGAAGCGAGCGACAGAGGTGAAGATACTGGAGTACAACTCAACGGTGGAGATAGTGTTTCAGGGGACAAATATAGTGGCAGGTGATGACCATCCGATGCATCTACATGGATTCAGTTTCTACGTTGTGGGATGGGGATTGGGGAATTTTGACAAGGACAAGGACCCTTTGACGTATAATCTTGTTGATCCTCCTCTTCAGAACACCATCGCTGTTCCTGTAAATGGTTGGACTACCATTAGATTCAAAGCAAACAATCCTGGCGTTTGGTTTATGCACTGTCATATCGATCGGCATATGTCATGGGGCATGGACGTGACATTCATAGTGAAAAATGGAAAGGGCCCAGGAGCACAAATTTCACCTCCGCCACAAGGAATGCCTCCGTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

62.5

Weight (kDa)

7.67

Isoelectric Point (pI)

31.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 148	2.5e-39	Multicopper oxidase
Cu-oxidase	PF00394	160 - 311	1e-39	Multicopper oxidase
Cu-oxidase_2	PF07731	418 - 548	1e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1376
Acc36I	ACCTGC	2 cut(s)	672, 1376
AccB7I	CCANNNNNTGG	1 cut(s)	249
AccBSI	CCGCTC	1 cut(s)	554
AciI	CCGC	7 cut(s)	549, 554, 684, 873, 903, 1149, 1673
AclI	AACGTT	1 cut(s)	176
AclWI	GGATC	2 cut(s)	408, 1487
AcoI	YGGCCR	2 cut(s)	157, 796
AcsI	RAATTY	5 cut(s)	479, 931, 1246, 1450, 1662
AcuI	CTGAAG	1 cut(s)	1487
AfaI	GTAC	2 cut(s)	1295, 1340
AfiI	CCNNNNNNNGG	5 cut(s)	249, 442, 443, 1529, 1679
AgsI	TTSAA	6 cut(s)	22, 320, 545, 570, 771, 1552
AjiI	CACGTC	2 cut(s)	1048, 1621
AjnI	CCWGG	4 cut(s)	322, 329, 1564, 1651
AleI	CACNNNNGTG	1 cut(s)	95
AloI	GAACNNNNNNTCC	2 cut(s)	1225, 1257
AluBI	AGCT	9 cut(s)	18, 47, 74, 637, 753, 1020, 1170, 1202, 1277
AluI	AGCT	9 cut(s)	18, 47, 74, 637, 753, 1020, 1170, 1202, 1277
Alw21I	GWGCWC	1 cut(s)	1660
AlwI	GGATC	2 cut(s)	408, 1487
AoxI	GGCC	4 cut(s)	157, 796, 1127, 1648
ApaI	GGGCCC	1 cut(s)	1652
ApeKI	GCWGC	1 cut(s)	854
ApoI	RAATTY	5 cut(s)	479, 931, 1246, 1450, 1662
AseI	ATTAAT	1 cut(s)	674
Asp700I	GAANNNNTTC	1 cut(s)	540
AspS9I	GGNCC	6 cut(s)	170, 290, 1127, 1468, 1648, 1649
AsuC2I	CCSGG	3 cut(s)	168, 597, 795
AsuHPI	GGTGA	3 cut(s)	1336, 1400, 1659
AsuNHI	GCTAGC	1 cut(s)	749
AvaII	GGWCC	3 cut(s)	170, 290, 1468
BaeGI	GKGCMC	1 cut(s)	1652
BaeI	ACNNNNGTAYC	4 cut(s)	189, 222, 1322, 1355
BanII	GRGCYC	1 cut(s)	1652
Bbv12I	GWGCWC	1 cut(s)	1660
BbvI	GCAGC	1 cut(s)	841
BccI	CCATC	4 cut(s)	251, 1404, 1431, 1520
BceAI	ACGGC	4 cut(s)	172, 667, 671, 1273
BciT130I	CCWGG	4 cut(s)	324, 331, 1566, 1653
BcnI	CCSGG	3 cut(s)	168, 597, 795
BfaI	CTAG	1 cut(s)	750
BfmI	CTRYAG	1 cut(s)	423
BfuAI	ACCTGC	2 cut(s)	672, 1376
BisI	GCNGC	2 cut(s)	855, 1149
BlsI	GCNGC	2 cut(s)	856, 1150
Bme1390I	CCNGG	7 cut(s)	168, 324, 331, 597, 795, 1566, 1653
Bme18I	GGWCC	3 cut(s)	170, 290, 1468
BmgBI	CACGTC	2 cut(s)	1048, 1621
BmgT120I	GGNCC	6 cut(s)	170, 290, 1127, 1468, 1648, 1649
BmiI	GGNNCC	4 cut(s)	328, 448, 1470, 1650
BmrFI	CCNGG	7 cut(s)	168, 324, 331, 597, 795, 1566, 1653
BmsI	GCATC	5 cut(s)	66, 736, 998, 1392, 1414
BmtI	GCTAGC	1 cut(s)	753
BplI	GAGNNNNNCTC	2 cut(s)	1328, 1360
BpmI	CTGGAG	2 cut(s)	213, 1355
BpuMI	CCSGG	3 cut(s)	168, 597, 795
Bsa29I	ATCGAT	1 cut(s)	1593
BsaBI	GATNNNNATC	2 cut(s)	606, 1395
BsaJI	CCNNGG	4 cut(s)	278, 415, 925, 1651
BsaXI	ACNNNNNCTCC	4 cut(s)	775, 805, 1346, 1376
Bsc4I	CCNNNNNNNGG	5 cut(s)	249, 442, 443, 1529, 1679
Bse1I	ACTGG	6 cut(s)	160, 254, 394, 1005, 1152, 1338
Bse3DI	GCAATG	4 cut(s)	64, 314, 711, 849
Bse8I	GATNNNNATC	2 cut(s)	606, 1395
BseBI	CCWGG	4 cut(s)	324, 331, 1566, 1653
BseCI	ATCGAT	1 cut(s)	1593
BseDI	CCNNGG	4 cut(s)	278, 415, 925, 1651
BseGI	GGATG	3 cut(s)	243, 1396, 1442
BseJI	GATNNNNATC	2 cut(s)	606, 1395
BseLI	CCNNNNNNNGG	5 cut(s)	249, 442, 443, 1529, 1679
BseMI	GCAATG	4 cut(s)	64, 314, 711, 849
BseMII	CTCAG	4 cut(s)	260, 372, 682, 756
BseNI	ACTGG	6 cut(s)	160, 254, 394, 1005, 1152, 1338
BseRI	GAGGAG	2 cut(s)	72, 1488
BseSI	GKGCMC	1 cut(s)	1652
BseXI	GCAGC	1 cut(s)	841
BseYI	CCCAGC	1 cut(s)	1124
Bsh1285I	CGRYCG	1 cut(s)	1597
BshFI	GGCC	4 cut(s)	159, 798, 1129, 1650
BshVI	ATCGAT	1 cut(s)	1593
BsiEI	CGRYCG	1 cut(s)	1597
BsiHKAI	GWGCWC	1 cut(s)	1660
BsiSI	CCGG	3 cut(s)	168, 597, 795
BslFI	GGGAC	3 cut(s)	382, 1150, 1384
BslI	CCNNNNNNNGG	5 cut(s)	249, 442, 443, 1529, 1679
BsmFI	GGGAC	3 cut(s)	382, 1150, 1384
BsmI	GAATGC	1 cut(s)	1689
BsnI	GGCC	4 cut(s)	159, 798, 1129, 1650
Bsp120I	GGGCCC	1 cut(s)	1648
Bsp1286I	GDGCHC	2 cut(s)	1652, 1660
Bsp143I	GATC	4 cut(s)	400, 601, 1492, 1594
Bsp19I	CCATGG	1 cut(s)	278
BspACI	CCGC	7 cut(s)	549, 554, 684, 873, 903, 1149, 1673
BspANI	GGCC	4 cut(s)	159, 798, 1129, 1650
BspCNI	CTCAG	4 cut(s)	261, 371, 681, 755
BspDI	ATCGAT	1 cut(s)	1593
BspLI	GGNNCC	4 cut(s)	328, 448, 1470, 1650
BspMI	ACCTGC	2 cut(s)	672, 1376
BspOI	GCTAGC	1 cut(s)	753
BspPI	GGATC	2 cut(s)	408, 1487
BsrBI	CCGCTC	1 cut(s)	554
BsrDI	GCAATG	4 cut(s)	64, 314, 711, 849
BsrI	ACTGG	6 cut(s)	160, 254, 394, 1005, 1152, 1338
BssECI	CCNNGG	4 cut(s)	278, 415, 925, 1651
BssMI	GATC	4 cut(s)	400, 601, 1492, 1594
BssT1I	CCWWGG	1 cut(s)	278
Bst2UI	CCWGG	4 cut(s)	324, 331, 1566, 1653
Bst4CI	ACNGT	9 cut(s)	52, 126, 151, 290, 412, 419, 733, 1351, 1586
Bst6I	CTCTTC	1 cut(s)	1506
BstC8I	GCNNGC	4 cut(s)	384, 751, 1200, 1314
BstDEI	CTNAG	4 cut(s)	269, 358, 668, 742
BstDSI	CCRYGG	3 cut(s)	278, 415, 925
BstF5I	GGATG	3 cut(s)	243, 1396, 1442
BstKTI	GATC	4 cut(s)	403, 604, 1495, 1597
BstMBI	GATC	4 cut(s)	400, 601, 1492, 1594
BstMCI	CGRYCG	1 cut(s)	1597
BstMWI	GCNNNNNNNGC	2 cut(s)	572, 860
BstNI	CCWGG	4 cut(s)	324, 331, 1566, 1653
BstNSI	RCATGY	1 cut(s)	386
BstSCI	CCNGG	7 cut(s)	166, 322, 329, 595, 793, 1564, 1651
BstSFI	CTRYAG	1 cut(s)	423
BstSLI	GKGCMC	1 cut(s)	1652
BstV1I	GCAGC	1 cut(s)	841
BstXI	CCANNNNNNTGG	2 cut(s)	254, 1220
Bsu15I	ATCGAT	1 cut(s)	1593
BsuRI	GGCC	4 cut(s)	159, 798, 1129, 1650
BsuTUI	ATCGAT	1 cut(s)	1593
BtgI	CCRYGG	3 cut(s)	278, 415, 925
BtgZI	GCGATG	1 cut(s)	1498
BtrI	CACGTC	2 cut(s)	1048, 1621
BtsCI	GGATG	3 cut(s)	243, 1396, 1442
BtsI	GCAGTG	1 cut(s)	906
BtsIMutI	CAGTG	5 cut(s)	247, 401, 906, 1159, 1582
BveI	ACCTGC	2 cut(s)	672, 1376
Cac8I	GCNNGC	4 cut(s)	384, 751, 1200, 1314
Cfr13I	GGNCC	6 cut(s)	170, 290, 1127, 1468, 1648, 1649
ClaI	ATCGAT	1 cut(s)	1593
CseI	GACGC	1 cut(s)	566
Csp6I	GTAC	2 cut(s)	1294, 1339
CspCI	CAANNNNNGTGG	2 cut(s)	1362, 1397
CviAII	CATG	9 cut(s)	188, 254, 279, 383, 1119, 1214, 1412, 1608, 1615
CviQI	GTAC	2 cut(s)	1294, 1339
DdeI	CTNAG	4 cut(s)	269, 358, 668, 742
DpnI	GATC	4 cut(s)	402, 603, 1494, 1596
DpnII	GATC	4 cut(s)	400, 601, 1492, 1594
EaeI	YGGCCR	2 cut(s)	157, 796
Eam1104I	CTCTTC	1 cut(s)	1506
EarI	CTCTTC	1 cut(s)	1506
EciI	GGCGGA	2 cut(s)	673, 1662
Eco130I	CCWWGG	1 cut(s)	278
Eco24I	GRGCYC	1 cut(s)	1652
Eco32I	GATATC	2 cut(s)	214, 517
Eco47I	GGWCC	3 cut(s)	170, 290, 1468
Eco57I	CTGAAG	1 cut(s)	1487
EcoO109I	RGGNCCY	2 cut(s)	1468, 1648
EcoRII	CCWGG	4 cut(s)	322, 329, 1564, 1651
EcoRV	GATATC	2 cut(s)	214, 517
EcoT14I	CCWWGG	1 cut(s)	278
EcoT22I	ATGCAT	1 cut(s)	1407
EcoT38I	GRGCYC	1 cut(s)	1652
ErhI	CCWWGG	1 cut(s)	278
FaeI	CATG	9 cut(s)	191, 257, 282, 386, 1122, 1217, 1415, 1611, 1618
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	3 cut(s)	382, 1150, 1384
FatI	CATG	9 cut(s)	187, 253, 278, 382, 1118, 1213, 1411, 1607, 1614
FauI	CCCGC	1 cut(s)	866
FauNDI	CATATG	1 cut(s)	1602
Fnu4HI	GCNGC	2 cut(s)	855, 1149
FokI	GGATG	3 cut(s)	230, 1383, 1449
FriOI	GRGCYC	1 cut(s)	1652
Fsp4HI	GCNGC	2 cut(s)	855, 1149
FspBI	CTAG	1 cut(s)	750
GluI	GCNGC	2 cut(s)	855, 1149
GsaI	CCCAGC	1 cut(s)	1128
GsuI	CTGGAG	2 cut(s)	213, 1355
HaeIII	GGCC	4 cut(s)	159, 798, 1129, 1650
HapII	CCGG	3 cut(s)	168, 597, 795
HgaI	GACGC	1 cut(s)	566
Hin1II	CATG	9 cut(s)	191, 257, 282, 386, 1122, 1217, 1415, 1611, 1618
HincII	GTYRAC	5 cut(s)	593, 1045, 1093, 1159, 1177
HindII	GTYRAC	5 cut(s)	593, 1045, 1093, 1159, 1177
HindIII	AAGCTT	3 cut(s)	72, 1018, 1200
HinfI	GANTC	6 cut(s)	274, 370, 883, 1138, 1416, 1548
HpaII	CCGG	3 cut(s)	168, 597, 795
HphI	GGTGA	3 cut(s)	1336, 1400, 1659
Hpy188I	TCNGA	8 cut(s)	286, 361, 521, 671, 745, 1281, 1401, 1506
Hpy188III	TCNNGA	2 cut(s)	145, 293
HpyAV	CCTTC	4 cut(s)	359, 436, 502, 978
HpyCH4III	ACNGT	9 cut(s)	52, 126, 151, 290, 412, 419, 733, 1351, 1586
HpyCH4IV	ACGT	8 cut(s)	176, 701, 726, 867, 1047, 1428, 1478, 1620
HpyCH4V	TGCA	5 cut(s)	691, 857, 1198, 1405, 1582
HpyF10VI	GCNNNNNNNGC	2 cut(s)	572, 860
HpyF3I	CTNAG	4 cut(s)	269, 358, 668, 742
HpySE526I	ACGT	8 cut(s)	176, 701, 726, 867, 1047, 1428, 1478, 1620
Hsp92II	CATG	9 cut(s)	191, 257, 282, 386, 1122, 1217, 1415, 1611, 1618
Kzo9I	GATC	4 cut(s)	400, 601, 1492, 1594
LmnI	GCTCC	5 cut(s)	326, 446, 551, 1282, 1655
Lsp1109I	GCAGC	1 cut(s)	841
LweI	GCATC	5 cut(s)	66, 736, 998, 1392, 1414
MaeI	CTAG	1 cut(s)	750
MaeII	ACGT	8 cut(s)	176, 701, 726, 867, 1047, 1428, 1478, 1620
MaeIII	GTNAC	4 cut(s)	233, 727, 781, 1621
MalI	GATC	4 cut(s)	402, 603, 1494, 1596
MbiI	CCGCTC	1 cut(s)	554
MboI	GATC	4 cut(s)	400, 601, 1492, 1594
MboII	GAAGA	6 cut(s)	16, 52, 116, 524, 1339, 1493
MhlI	GDGCHC	2 cut(s)	1652, 1660
MluCI	AATT	8 cut(s)	12, 479, 931, 1114, 1246, 1267, 1450, 1662
MlyI	GAGTC	2 cut(s)	364, 1132
MmeI	TCCRAC	1 cut(s)	1514
Mph1103I	ATGCAT	1 cut(s)	1407
MroXI	GAANNNNTTC	1 cut(s)	540
MseI	TTAA	6 cut(s)	11, 261, 633, 674, 818, 1266
MslI	CAYNNNNRTG	5 cut(s)	95, 252, 1218, 1410, 1619
MspI	CCGG	3 cut(s)	168, 597, 795
MspR9I	CCNGG	7 cut(s)	168, 324, 331, 597, 795, 1566, 1653
Mva1269I	GAATGC	1 cut(s)	1689
MvaI	CCWGG	4 cut(s)	324, 331, 1566, 1653
MwoI	GCNNNNNNNGC	2 cut(s)	572, 860
NciI	CCSGG	3 cut(s)	168, 597, 795
NcoI	CCATGG	1 cut(s)	278
NdeI	CATATG	1 cut(s)	1602
NdeII	GATC	4 cut(s)	400, 601, 1492, 1594
NheI	GCTAGC	1 cut(s)	749
NlaIII	CATG	9 cut(s)	191, 257, 282, 386, 1122, 1217, 1415, 1611, 1618
NlaIV	GGNNCC	4 cut(s)	328, 448, 1470, 1650
NmuCI	GTSAC	3 cut(s)	727, 781, 1621
NsiI	ATGCAT	1 cut(s)	1407
NspI	RCATGY	1 cut(s)	386
OliI	CACNNNNGTG	1 cut(s)	95
PaeI	GCATGC	1 cut(s)	386
PaqCI	CACCTGC	1 cut(s)	1376
PcsI	WCGNNNNNNNCGW	1 cut(s)	1313
PctI	GAATGC	1 cut(s)	1689
PdmI	GAANNNNTTC	1 cut(s)	540
PfeI	GAWTC	4 cut(s)	274, 883, 1416, 1548
PflMI	CCANNNNNTGG	1 cut(s)	249
PfoI	TCCNGGA	1 cut(s)	166
PkrI	GCNGC	2 cut(s)	856, 1150
Ple19I	CGATCG	1 cut(s)	1597
PleI	GAGTC	2 cut(s)	364, 1132
PpsI	GAGTC	2 cut(s)	364, 1132
PpuMI	RGGWCCY	1 cut(s)	1468
PshBI	ATTAAT	1 cut(s)	674
Psp1406I	AACGTT	1 cut(s)	176
Psp5II	RGGWCCY	1 cut(s)	1468
Psp6I	CCWGG	4 cut(s)	322, 329, 1564, 1651
PspFI	CCCAGC	1 cut(s)	1124
PspGI	CCWGG	4 cut(s)	322, 329, 1564, 1651
PspN4I	GGNNCC	4 cut(s)	328, 448, 1470, 1650
PspOMI	GGGCCC	1 cut(s)	1648
PspPI	GGNCC	6 cut(s)	170, 290, 1127, 1468, 1648, 1649
PspPPI	RGGWCCY	1 cut(s)	1468
PvuI	CGATCG	1 cut(s)	1597
RsaI	GTAC	2 cut(s)	1295, 1340
RsaNI	GTAC	2 cut(s)	1294, 1339
RseI	CAYNNNNRTG	5 cut(s)	95, 252, 1218, 1410, 1619
SaqAI	TTAA	6 cut(s)	11, 261, 633, 674, 818, 1266
SatI	GCNGC	2 cut(s)	855, 1149
Sau3AI	GATC	4 cut(s)	400, 601, 1492, 1594
Sau96I	GGNCC	6 cut(s)	170, 290, 1127, 1468, 1648, 1649
SchI	GAGTC	2 cut(s)	364, 1132
ScrFI	CCNGG	7 cut(s)	168, 324, 331, 597, 795, 1566, 1653
SduI	GDGCHC	2 cut(s)	1652, 1660
SfaNI	GCATC	5 cut(s)	66, 736, 998, 1392, 1414
SfcI	CTRYAG	1 cut(s)	423
SinI	GGWCC	3 cut(s)	170, 290, 1468
SmiMI	CAYNNNNRTG	5 cut(s)	95, 252, 1218, 1410, 1619
SphI	GCATGC	1 cut(s)	386
Sse9I	AATT	8 cut(s)	12, 479, 931, 1114, 1246, 1267, 1450, 1662
SsiI	CCGC	7 cut(s)	549, 554, 684, 873, 903, 1149, 1673
SspI	AATATT	1 cut(s)	964
SspMI	CTAG	1 cut(s)	750
StyD4I	CCNGG	7 cut(s)	166, 322, 329, 595, 793, 1564, 1651
StyI	CCWWGG	1 cut(s)	278
TaaI	ACNGT	9 cut(s)	52, 126, 151, 290, 412, 419, 733, 1351, 1586
TaiI	ACGT	8 cut(s)	179, 704, 729, 870, 1050, 1431, 1481, 1623
TaqI	TCGA	2 cut(s)	403, 1593
TasI	AATT	8 cut(s)	12, 479, 931, 1114, 1246, 1267, 1450, 1662
TatI	WGTACW	1 cut(s)	1338
TauI	GCSGC	1 cut(s)	1151
TfiI	GAWTC	4 cut(s)	274, 883, 1416, 1548
Tru1I	TTAA	6 cut(s)	11, 261, 633, 674, 818, 1266
Tru9I	TTAA	6 cut(s)	11, 261, 633, 674, 818, 1266
TscAI	CASTG	5 cut(s)	254, 401, 913, 1159, 1589
TseFI	GTSAC	3 cut(s)	727, 781, 1621
TseI	GCWGC	1 cut(s)	854
Tsp45I	GTSAC	3 cut(s)	727, 781, 1621
TspDTI	ATGAA	6 cut(s)	17, 176, 549, 930, 1107, 1618
TspGWI	ACGGA	3 cut(s)	942, 1078, 1680
TspRI	CASTG	5 cut(s)	254, 401, 913, 1159, 1589
Van91I	CCANNNNNTGG	1 cut(s)	249
VpaK11BI	GGWCC	3 cut(s)	170, 290, 1468
VspI	ATTAAT	1 cut(s)	674
XapI	RAATTY	5 cut(s)	479, 931, 1246, 1450, 1662
XceI	RCATGY	1 cut(s)	386
XmnI	GAANNNNTTC	1 cut(s)	540
XspI	CTAG	1 cut(s)	750
Zsp2I	ATGCAT	1 cut(s)	1407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.