Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Forward (+)

55853705 .. 55871626

Gene Structure 17922 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00122580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGAGCAGGCATGGTGTTGCGCAACCAAGATATCCATGGTCTGACGGACCAGAGTATATCACACAGTGCCCAATTCAACCGGGAGCCAAGTTCACCCAAAAGATCATTTTCTCAAAGGAAGAAGGCACCCTTTGGTGGCATGCTCACAGTGAGTGGGATCGAGCCACTGTCCACGGTCCCATCATCATATACCCCAACAAGAACAACAATTACCCTTTTGCCAAGCCTCATGCAGAAATTCCAATTATATTGGGAGAGTGGTGGAAGGTAGATATAGGGAAGCTTTATACTCAAACTATTCAATCCGGAGGGGACCCTAATACTTCCGACGCTTACCTCATCAATGGTCAACCTGGCGATCTTTATCCATGCTCTAAATCAGAGACGTTCAAGTTGATGGTTGATTATGGCAAAACGTATCTACTGAGACTAATCAACTCCGGGGTGCAAGAGATTCTGTTTTTCGCCATCGCCAATCACAAAGTTACAGTTGTAGGGACAGATGCTAGCTACACCAAGCCTTTCACAACCGATTATGTCACCATCTCACCTGGTCAAACCATTGACCTTTTGCTCCATGCTAATCAGAGGCCTAACCACTATTACATGGCCGCTACGGCCTACGTTGGTGGCGCTGTTCCTTATGATAACACCACCACCACAGCCGTACTACAATACACGAATCGGGGTTACACCCCGTCTTCAACCCCTTTGTTTCCTAATCTTCCTGCTCACAATGACACTAATGCATCAGTTCATTTTAGTGCTAGTCTCAGGAGCTTGGCTGATAAAAACCACCCCATTGACGTTCCACTAAAAATTACAACTCCCTTGTTTTATACCGTCTCCGTCAACACGTTCCAGTGCCCCAATAATTCATGCGCCGGGCCTAATGGGACGCGTCTGGCTGCTAGTATAAACAACATTAGCTTTGTGAACCCTAGCATTGACATACTACAAGCTTACTATTACCATGTCAACGGGCAATTTGGAACTCGGTTTCCAAGTTCCCCGCCTCTGCTGTTTAACTTTACAGCTCAGTACTTGCCGCTGTACCTTCAGACCCCAAAACGAGGGACAGAGGTGAAGGTACTGGAGTACAACGCGACAGTGGAGCTTGTGTTGCAGGGGACTAATTTGGTGGCAGGGGATGACCATCCAATGCATCTTCATGGTTACAGTTTCTATGTGGTTGGATTGGGGCTTGGGAACTTTGACAAGGATAAGGACCCTTTGAAATATAATCTTGTTGATCCTCCTCTTCAAAACACCATTGCTGTCCCTGTAAATGGGTGGGCTACCATCAGATTCAAGGCTGATAATCCTGGAGATTTTCGGGTAAAACTGAACCTATTGGGCCTAAATGATTGTCGGAACCTTAGAGGCTGGCCATATCCTTTTGTGGCTTTACTTGTTACTTCACATAGAAGATTACAAGAGCAAGAAGGAGTACAAGAAGGACTTCTTAATCCAAGGTGCTTCAAGGTGGAGGAGACACACACAAGGAGAGATCAAGGAGAGGAACTTTGGTGGTTCACTTGGATCAGATTGAGATCACGCTCCAAGGATGAGCAAGTTTATTGTTCATTGCTTATATTTGATATTTCATTGAACAAGGTCCAAGGAACAGGAGTTAAAGATAAAGCCGGCCATATCCTTTTGTGGCTTTACTTGTTACATCAAAGAGAAGATTACAAGCACAAGAAGGAGTACAAGAACGAGTTCTTAATCCAAGGTGCTTCAAGGTGGAGGAGACACGCACAAGGAGAGATCAAGGAGAGGAACTTTAGTGGTTCACTTGGATCGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

603

Amino Acids

68.29

Weight (kDa)

8.43

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	2 - 67	3.7e-19	Multicopper oxidase
Cu-oxidase	PF00394	80 - 228	1.8e-40	Multicopper oxidase
Cu-oxidase_2	PF07731	334 - 445	2.5e-27	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	21
AccB1I	GGYRCC	1 cut(s)	125
AccII	CGCG	2 cut(s)	901, 1106
AccIII	TCCGGA	1 cut(s)	305
AciI	CCGC	3 cut(s)	612, 1013, 1049
AclWI	GGATC	4 cut(s)	165, 1247, 1550, 1810
AcoI	YGGCCR	3 cut(s)	609, 1388, 1648
AcsI	RAATTY	1 cut(s)	237
AcuI	CTGAAG	1 cut(s)	1043
AdeI	CACNNNGTG	1 cut(s)	66
AfaI	GTAC	7 cut(s)	669, 1043, 1055, 1092, 1100, 1452, 1712
AfiI	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
AflIII	ACRYGT	2 cut(s)	855, 899
AjnI	CCWGG	3 cut(s)	352, 550, 1324
AloI	GAACNNNNNNTCC	2 cut(s)	985, 1017
AluBI	AGCT	7 cut(s)	283, 510, 780, 930, 962, 1037, 1117
AluI	AGCT	7 cut(s)	283, 510, 780, 930, 962, 1037, 1117
Alw26I	GTCTC	6 cut(s)	377, 421, 776, 850, 1487, 1747
AlwI	GGATC	4 cut(s)	165, 1247, 1550, 1810
Aor13HI	TCCGGA	1 cut(s)	305
AoxI	GGCC	7 cut(s)	590, 609, 618, 887, 1357, 1388, 1648
ApeKI	GCWGC	1 cut(s)	908
ApoI	RAATTY	1 cut(s)	237
Asp700I	GAANNNNTTC	2 cut(s)	1461, 1721
AspLEI	GCGC	3 cut(s)	22, 635, 884
AspS9I	GGNCC	7 cut(s)	47, 176, 313, 887, 1228, 1357, 1618
AsuC2I	CCSGG	3 cut(s)	81, 442, 886
AsuHPI	GGTGA	4 cut(s)	85, 532, 540, 1096
AsuNHI	GCTAGC	1 cut(s)	506
AvaII	GGWCC	5 cut(s)	47, 176, 313, 1228, 1618
BaeGI	GKGCMC	2 cut(s)	71, 869
BaeI	ACNNNNGTAYC	2 cut(s)	1082, 1115
BalI	TGGCCA	1 cut(s)	1390
BanI	GGYRCC	1 cut(s)	125
BbsI	GAAGAC	1 cut(s)	693
BbvI	GCAGC	1 cut(s)	895
BccI	CCATC	6 cut(s)	188, 391, 476, 551, 1164, 1310
BceAI	ACGGC	2 cut(s)	633, 650
BciT130I	CCWGG	3 cut(s)	354, 552, 1326
BcnI	CCSGG	3 cut(s)	81, 442, 886
BcoDI	GTCTC	6 cut(s)	377, 421, 776, 850, 1487, 1747
BfaI	CTAG	4 cut(s)	507, 768, 912, 942
BfoI	RGCGCY	1 cut(s)	636
BglI	GCCNNNNNGGC	1 cut(s)	617
BisI	GCNGC	3 cut(s)	612, 909, 1049
BlsI	GCNGC	3 cut(s)	613, 910, 1050
BmcAI	AGTACT	1 cut(s)	1043
Bme1390I	CCNGG	6 cut(s)	81, 354, 442, 552, 886, 1326
Bme18I	GGWCC	5 cut(s)	47, 176, 313, 1228, 1618
BmgT120I	GGNCC	7 cut(s)	47, 176, 313, 887, 1228, 1357, 1618
BmiI	GGNNCC	7 cut(s)	85, 127, 178, 314, 315, 1230, 1376
BmrFI	CCNGG	6 cut(s)	81, 354, 442, 552, 886, 1326
BmsI	GCATC	3 cut(s)	493, 758, 1174
BmtI	GCTAGC	1 cut(s)	510
BpiI	GAAGAC	1 cut(s)	693
BpmI	CTGGAG	2 cut(s)	1115, 1347
BpuMI	CCSGG	3 cut(s)	81, 442, 886
BsaBI	GATNNNNATC	3 cut(s)	363, 1155, 1552
BsaJI	CCNNGG	7 cut(s)	35, 172, 441, 1472, 1563, 1621, 1732
BsaWI	WCCGGW	1 cut(s)	305
BsaXI	ACNNNNNCTCC	2 cut(s)	1106, 1136
Bsc4I	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
Bse118I	RCCGGY	1 cut(s)	1646
Bse1I	ACTGG	2 cut(s)	862, 1098
Bse3DI	GCAATG	2 cut(s)	1272, 1586
Bse8I	GATNNNNATC	3 cut(s)	363, 1155, 1552
BseAI	TCCGGA	1 cut(s)	305
BseBI	CCWGG	3 cut(s)	354, 552, 1326
BseDI	CCNNGG	7 cut(s)	35, 172, 441, 1472, 1563, 1621, 1732
BseGI	GGATG	3 cut(s)	1156, 1156, 1573
BseJI	GATNNNNATC	3 cut(s)	363, 1155, 1552
BseLI	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
BseMI	GCAATG	2 cut(s)	1272, 1586
BseMII	CTCAG	3 cut(s)	416, 787, 1052
BseNI	ACTGG	2 cut(s)	862, 1098
BseRI	GAGGAG	3 cut(s)	1248, 1505, 1765
BseSI	GKGCMC	2 cut(s)	71, 869
BseXI	GCAGC	1 cut(s)	895
Bsh1236I	CGCG	2 cut(s)	901, 1106
BshFI	GGCC	7 cut(s)	592, 611, 620, 889, 1359, 1390, 1650
BshNI	GGYRCC	1 cut(s)	125
BsiSI	CCGG	5 cut(s)	80, 306, 441, 885, 1647
BslFI	GGGAC	7 cut(s)	162, 326, 511, 910, 1090, 1144, 1265
BslI	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
BsmAI	GTCTC	6 cut(s)	377, 421, 776, 850, 1487, 1747
BsmBI	CGTCTC	2 cut(s)	377, 850
BsmFI	GGGAC	7 cut(s)	162, 326, 511, 910, 1090, 1144, 1265
BsnI	GGCC	7 cut(s)	592, 611, 620, 889, 1359, 1390, 1650
Bsp1286I	GDGCHC	2 cut(s)	71, 869
Bsp13I	TCCGGA	1 cut(s)	305
Bsp143I	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
Bsp19I	CCATGG	1 cut(s)	35
BspACI	CCGC	3 cut(s)	612, 1013, 1049
BspANI	GGCC	7 cut(s)	592, 611, 620, 889, 1359, 1390, 1650
BspCNI	CTCAG	3 cut(s)	417, 786, 1051
BspEI	TCCGGA	1 cut(s)	305
BspFNI	CGCG	2 cut(s)	901, 1106
BspLI	GGNNCC	7 cut(s)	85, 127, 178, 314, 315, 1230, 1376
BspOI	GCTAGC	1 cut(s)	510
BspPI	GGATC	4 cut(s)	165, 1247, 1550, 1810
BspT107I	GGYRCC	1 cut(s)	125
BsrDI	GCAATG	2 cut(s)	1272, 1586
BsrFI	RCCGGY	1 cut(s)	1646
BsrI	ACTGG	2 cut(s)	862, 1098
BssAI	RCCGGY	1 cut(s)	1646
BssECI	CCNNGG	7 cut(s)	35, 172, 441, 1472, 1563, 1621, 1732
BssMI	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
BssT1I	CCWWGG	5 cut(s)	35, 1472, 1563, 1621, 1732
Bst2UI	CCWGG	3 cut(s)	354, 552, 1326
Bst4CI	ACNGT	8 cut(s)	66, 149, 169, 176, 490, 844, 1111, 1181
Bst6I	CTCTTC	1 cut(s)	1266
BstC8I	GCNNGC	5 cut(s)	8, 141, 508, 1388, 1648
BstDEI	CTNAG	4 cut(s)	425, 773, 1038, 1379
BstDSI	CCRYGG	2 cut(s)	35, 172
BstF5I	GGATG	3 cut(s)	1156, 1156, 1573
BstFNI	CGCG	2 cut(s)	901, 1106
BstH2I	RGCGCY	1 cut(s)	636
BstHHI	GCGC	3 cut(s)	22, 635, 884
BstKTI	GATC	9 cut(s)	105, 160, 361, 1255, 1513, 1545, 1556, 1773, 1805
BstMAI	GTCTC	6 cut(s)	377, 421, 776, 850, 1487, 1747
BstMBI	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
BstMWI	GCNNNNNNNGC	2 cut(s)	617, 1123
BstNI	CCWGG	3 cut(s)	354, 552, 1326
BstNSI	RCATGY	1 cut(s)	143
BstSCI	CCNGG	6 cut(s)	79, 352, 440, 550, 884, 1324
BstSLI	GKGCMC	2 cut(s)	71, 869
BstUI	CGCG	2 cut(s)	901, 1106
BstV1I	GCAGC	1 cut(s)	895
BstV2I	GAAGAC	1 cut(s)	693
BsuRI	GGCC	7 cut(s)	592, 611, 620, 889, 1359, 1390, 1650
BtgI	CCRYGG	2 cut(s)	35, 172
BtgZI	GCGATG	1 cut(s)	454
BtsCI	GGATG	3 cut(s)	1156, 1156, 1573
BtsIMutI	CAGTG	5 cut(s)	71, 154, 165, 869, 1116
Cac8I	GCNNGC	5 cut(s)	8, 141, 508, 1388, 1648
CfoI	GCGC	3 cut(s)	22, 635, 884
Cfr10I	RCCGGY	1 cut(s)	1646
Cfr13I	GGNCC	7 cut(s)	47, 176, 313, 887, 1228, 1357, 1618
CseI	GACGC	3 cut(s)	338, 890, 907
CsiI	ACCWGGT	1 cut(s)	550
Csp6I	GTAC	7 cut(s)	668, 1042, 1054, 1091, 1099, 1451, 1711
CviQI	GTAC	7 cut(s)	668, 1042, 1054, 1091, 1099, 1451, 1711
DdeI	CTNAG	4 cut(s)	425, 773, 1038, 1379
DpnI	GATC	9 cut(s)	104, 159, 360, 1254, 1512, 1544, 1555, 1772, 1804
DpnII	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
DraIII	CACNNNGTG	1 cut(s)	66
EaeI	YGGCCR	3 cut(s)	609, 1388, 1648
Eam1104I	CTCTTC	1 cut(s)	1266
EarI	CTCTTC	1 cut(s)	1266
Eco130I	CCWWGG	5 cut(s)	35, 1472, 1563, 1621, 1732
Eco147I	AGGCCT	1 cut(s)	592
Eco32I	GATATC	1 cut(s)	32
Eco47I	GGWCC	5 cut(s)	47, 176, 313, 1228, 1618
Eco57I	CTGAAG	1 cut(s)	1043
EcoO109I	RGGNCCY	2 cut(s)	313, 1228
EcoRII	CCWGG	3 cut(s)	352, 550, 1324
EcoRV	GATATC	1 cut(s)	32
EcoT14I	CCWWGG	5 cut(s)	35, 1472, 1563, 1621, 1732
EcoT22I	ATGCAT	2 cut(s)	751, 1167
ErhI	CCWWGG	5 cut(s)	35, 1472, 1563, 1621, 1732
Esp3I	CGTCTC	2 cut(s)	377, 850
FalI	AAGNNNNNCTT	6 cut(s)	114, 146, 1446, 1478, 1449, 1481
FaqI	GGGAC	7 cut(s)	162, 326, 511, 910, 1090, 1144, 1265
FauI	CCCGC	1 cut(s)	1020
Fnu4HI	GCNGC	3 cut(s)	612, 909, 1049
FokI	GGATG	3 cut(s)	1143, 1163, 1580
Fsp4HI	GCNGC	3 cut(s)	612, 909, 1049
FspBI	CTAG	4 cut(s)	507, 768, 912, 942
FspI	TGCGCA	1 cut(s)	21
GlaI	GCGC	3 cut(s)	21, 634, 883
GluI	GCNGC	3 cut(s)	612, 909, 1049
GsuI	CTGGAG	2 cut(s)	1115, 1347
HaeII	RGCGCY	1 cut(s)	636
HaeIII	GGCC	7 cut(s)	592, 611, 620, 889, 1359, 1390, 1650
HapII	CCGG	5 cut(s)	80, 306, 441, 885, 1647
HgaI	GACGC	3 cut(s)	338, 890, 907
HhaI	GCGC	3 cut(s)	22, 635, 884
Hin6I	GCGC	3 cut(s)	20, 633, 882
HinP1I	GCGC	3 cut(s)	20, 633, 882
HincII	GTYRAC	3 cut(s)	350, 853, 979
HindII	GTYRAC	3 cut(s)	350, 853, 979
HindIII	AAGCTT	2 cut(s)	281, 960
HinfI	GANTC	3 cut(s)	454, 682, 1308
HpaII	CCGG	5 cut(s)	80, 306, 441, 885, 1647
HphI	GGTGA	4 cut(s)	85, 532, 540, 1096
Hpy166II	GTNNAC	8 cut(s)	93, 172, 350, 853, 937, 979, 1536, 1796
Hpy188I	TCNGA	9 cut(s)	43, 328, 382, 588, 1062, 1307, 1374, 1547, 1807
Hpy188III	TCNNGA	2 cut(s)	306, 775
Hpy8I	GTNNAC	8 cut(s)	93, 172, 350, 853, 937, 979, 1536, 1796
Hpy99I	CGWCG	1 cut(s)	332
HpyAV	CCTTC	7 cut(s)	116, 259, 1067, 1081, 1439, 1451, 1699
HpyCH4III	ACNGT	8 cut(s)	66, 149, 169, 176, 490, 844, 1111, 1181
HpyCH4IV	ACGT	5 cut(s)	386, 416, 624, 807, 857
HpyCH4V	TGCA	5 cut(s)	233, 448, 749, 1126, 1165
HpyF10VI	GCNNNNNNNGC	2 cut(s)	617, 1123
HpyF3I	CTNAG	4 cut(s)	425, 773, 1038, 1379
HpySE526I	ACGT	5 cut(s)	386, 416, 624, 807, 857
HspAI	GCGC	3 cut(s)	20, 633, 882
KflI	GGGWCCC	1 cut(s)	313
Kpn2I	TCCGGA	1 cut(s)	305
KroI	GCCGGC	1 cut(s)	1646
KroNI	GCCGGC	1 cut(s)	1648
Kzo9I	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
LmnI	GCTCC	5 cut(s)	83, 579, 777, 1114, 1565
Lsp1109I	GCAGC	1 cut(s)	895
LweI	GCATC	3 cut(s)	493, 758, 1174
MabI	ACCWGGT	1 cut(s)	550
MaeI	CTAG	4 cut(s)	507, 768, 912, 942
MaeII	ACGT	5 cut(s)	386, 416, 624, 807, 857
MaeIII	GTNAC	6 cut(s)	484, 538, 689, 1175, 1414, 1674
MalI	GATC	9 cut(s)	104, 159, 360, 1254, 1512, 1544, 1555, 1772, 1804
MboI	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
MboII	GAAGA	7 cut(s)	131, 693, 716, 1160, 1253, 1440, 1700
MhlI	GDGCHC	2 cut(s)	71, 869
MlsI	TGGCCA	1 cut(s)	1390
MluCI	AATT	8 cut(s)	72, 208, 237, 243, 819, 874, 986, 1135
MluI	ACGCGT	1 cut(s)	899
MluNI	TGGCCA	1 cut(s)	1390
MmeI	TCCRAC	3 cut(s)	351, 1174, 1352
Mox20I	TGGCCA	1 cut(s)	1390
Mph1103I	ATGCAT	2 cut(s)	751, 1167
MroI	TCCGGA	1 cut(s)	305
MroNI	GCCGGC	1 cut(s)	1646
MroXI	GAANNNNTTC	2 cut(s)	1461, 1721
MscI	TGGCCA	1 cut(s)	1390
MseI	TTAA	4 cut(s)	1026, 1467, 1635, 1727
MslI	CAYNNNNRTG	2 cut(s)	762, 1170
Msp20I	TGGCCA	1 cut(s)	1390
MspA1I	CMGCKG	1 cut(s)	1051
MspI	CCGG	5 cut(s)	80, 306, 441, 885, 1647
MspR9I	CCNGG	6 cut(s)	81, 354, 442, 552, 886, 1326
MvaI	CCWGG	3 cut(s)	354, 552, 1326
MvnI	CGCG	2 cut(s)	901, 1106
MwoI	GCNNNNNNNGC	2 cut(s)	617, 1123
NaeI	GCCGGC	1 cut(s)	1648
NciI	CCSGG	3 cut(s)	81, 442, 886
NcoI	CCATGG	1 cut(s)	35
NdeII	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
NgoMIV	GCCGGC	1 cut(s)	1646
NheI	GCTAGC	1 cut(s)	506
NlaIV	GGNNCC	7 cut(s)	85, 127, 178, 314, 315, 1230, 1376
NmuCI	GTSAC	1 cut(s)	538
NsbI	TGCGCA	1 cut(s)	21
NsiI	ATGCAT	2 cut(s)	751, 1167
NspI	RCATGY	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	143
PceI	AGGCCT	1 cut(s)	592
PdiI	GCCGGC	1 cut(s)	1648
PdmI	GAANNNNTTC	2 cut(s)	1461, 1721
PfeI	GAWTC	3 cut(s)	454, 682, 1308
PfoI	TCCNGGA	1 cut(s)	1324
PkrI	GCNGC	3 cut(s)	613, 910, 1050
PpuMI	RGGWCCY	2 cut(s)	313, 1228
Psp5II	RGGWCCY	2 cut(s)	313, 1228
Psp6I	CCWGG	3 cut(s)	352, 550, 1324
PspGI	CCWGG	3 cut(s)	352, 550, 1324
PspN4I	GGNNCC	7 cut(s)	85, 127, 178, 314, 315, 1230, 1376
PspPI	GGNCC	7 cut(s)	47, 176, 313, 887, 1228, 1357, 1618
PspPPI	RGGWCCY	2 cut(s)	313, 1228
PsrI	GAACNNNNNNTAC	2 cut(s)	194, 226
RsaI	GTAC	7 cut(s)	669, 1043, 1055, 1092, 1100, 1452, 1712
RsaNI	GTAC	7 cut(s)	668, 1042, 1054, 1091, 1099, 1451, 1711
RseI	CAYNNNNRTG	2 cut(s)	762, 1170
SaqAI	TTAA	4 cut(s)	1026, 1467, 1635, 1727
SatI	GCNGC	3 cut(s)	612, 909, 1049
Sau3AI	GATC	9 cut(s)	102, 157, 358, 1252, 1510, 1542, 1553, 1770, 1802
Sau96I	GGNCC	7 cut(s)	47, 176, 313, 887, 1228, 1357, 1618
ScaI	AGTACT	1 cut(s)	1043
ScrFI	CCNGG	6 cut(s)	81, 354, 442, 552, 886, 1326
SduI	GDGCHC	2 cut(s)	71, 869
SexAI	ACCWGGT	1 cut(s)	550
SfaNI	GCATC	3 cut(s)	493, 758, 1174
SfiI	GGCCNNNNNGGCC	1 cut(s)	617
SinI	GGWCC	5 cut(s)	47, 176, 313, 1228, 1618
SmiMI	CAYNNNNRTG	2 cut(s)	762, 1170
SphI	GCATGC	1 cut(s)	143
Sse9I	AATT	8 cut(s)	72, 208, 237, 243, 819, 874, 986, 1135
SseBI	AGGCCT	1 cut(s)	592
SsiI	CCGC	3 cut(s)	612, 1013, 1049
SspMI	CTAG	4 cut(s)	507, 768, 912, 942
StuI	AGGCCT	1 cut(s)	592
StyD4I	CCNGG	6 cut(s)	79, 352, 440, 550, 884, 1324
StyI	CCWWGG	5 cut(s)	35, 1472, 1563, 1621, 1732
TaaI	ACNGT	8 cut(s)	66, 149, 169, 176, 490, 844, 1111, 1181
TaiI	ACGT	5 cut(s)	389, 419, 627, 810, 860
TaqI	TCGA	1 cut(s)	160
TasI	AATT	8 cut(s)	72, 208, 237, 243, 819, 874, 986, 1135
TatI	WGTACW	4 cut(s)	1041, 1098, 1450, 1710
TauI	GCSGC	2 cut(s)	614, 1051
TfiI	GAWTC	3 cut(s)	454, 682, 1308
Tru1I	TTAA	4 cut(s)	1026, 1467, 1635, 1727
Tru9I	TTAA	4 cut(s)	1026, 1467, 1635, 1727
TscAI	CASTG	5 cut(s)	71, 154, 172, 869, 1116
TseFI	GTSAC	1 cut(s)	538
TseI	GCWGC	1 cut(s)	908
Tsp45I	GTSAC	1 cut(s)	538
TspDTI	ATGAA	5 cut(s)	746, 867, 1160, 1575, 1596
TspGWI	ACGGA	2 cut(s)	60, 838
TspRI	CASTG	5 cut(s)	71, 154, 172, 869, 1116
VpaK11BI	GGWCC	5 cut(s)	47, 176, 313, 1228, 1618
XapI	RAATTY	1 cut(s)	237
XceI	RCATGY	1 cut(s)	143
XcmI	CCANNNNNNNNNTGG	1 cut(s)	33
XmnI	GAANNNNTTC	2 cut(s)	1461, 1721
XspI	CTAG	4 cut(s)	507, 768, 912, 942
ZrmI	AGTACT	1 cut(s)	1043
Zsp2I	ATGCAT	2 cut(s)	751, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.