RLG00000008541

Lignin degradation and detoxification of lignin-derived products

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
31787942 .. 31794736
6795 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008541

Sequence Viewer

Length: 1464 bp
ATGAAGATTTCGATTAGCCTGCAACTACTTTTGGGCTTGTTATTGGCTATTAATGGCATCCTCCTCCATTGCCAAGCTTGGCCAGCTCGTTACACTTTTGTGGTGGAAGAAACTCCATACAAAAGATTGTGTAGCACAAAGAACATATTGACTGTAAATGGTCAGTTTCCCGGACCGACTTTGTACGCTCGCAAAGGAGACACCGTCATCGTCGATGTCTTTAACAGGGACAATCGTAACATTACTCTCCACTGGCATGGTGTTGCGCAACCAAGGAATCCATGGTCGGACGGACCAGATTATATCACGCAGTGCACTCTTTGGTGGCATGCTCACGGTGAGTGGGATCGAGCCACTGTACATGGTGCCATCATCATATACCCCAACAAGGACAACAATTACCCTTTTGCCAAGCCTCATGAAGAAATCCCGATCATATTGGGGAAGCTTTATACTCAAACTATTCAATCCGGAGGGGACCCTAATAATTCCTCCGCTTTCCTCATTAACCGTCAACCCGGCGATCTATATCCATGCTCTGAATCAGTTGTAGGGGCGGATGCTAGCTACACCAAGCCTTTCACAACCGATTATGTTTCGATCTCACCTGGTCAAACCCTTGACCTTTTGCTCACTGCTAATCAGAAGCCTAACCACTACTACATGGCCGCTACAGCCTATGTAGGTGGTGCTGGGCATGGGGTTACTTATGATAACACCACCACCACAGCCCTACTGCAATACTCAAATCGCGGGTCAAAAAATTACACGTACACCCCTTCTTCAACCCCTTCGTTTCCTACTCTTCCTGCCCACAATAACACTAATGCATCGGTTAATTTTTCCGGCATCTCCGTCAACTCGTTTCCCTGCCCGAATAATTCCTGCGCCGGGCCAAATGGGACACGTTTCGCCGCTAGCGTGAACAACATCAGCTTTGTGGACCCTAGAATTGACATACTACAAGCTTACTATTATCATGTCAACGGGGTATTTGGAACTCGCTTTCCAAATTTCCCGCCCTTGCTGTTTAATTTTACGGTGAAGGACTTGCCGCTGTACCTTCAGATTCCGAAACGAGGGACGGAGGTGAAGGTATTGGAGTACAACACCACGGTGGAGCTTGTGTTTCAAGGGACTAATTTGGTGGCAGGGAATGACCATCCAATGCATCTGCATGGTTACAGTTTCTATGTTGTTGGATTGGAGCTTGGGAACTTTGACAAGGATAAGGACCCTTTGAAATATAATCTTGTCGATCCTCCTCTTCGGAACACAGTTATCGTCCCTGCAAAAGGGTGGGCTACCATTAGATTCAAGGCCAACAACCCTGGAGTTTGGTTTATGCATTGCCATCTGGATAGGCATATGTCATGGGGCATGGACGTGACATTCATAGTGAAAAATGGAAAGGGCCCTCAAGCACAAATGTTACCTCCACCACCGGATATGCCACCATGTTAA

Protein Analysis

488

Amino Acids

54.2

Weight (kDa)

8.03

Isoelectric Point (pI)

32.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 35 - 106 2.1e-23 Multicopper oxidase
Cu-oxidase PF00394 183 - 250 4.5e-14 Multicopper oxidase
Cu-oxidase_2 PF07731 357 - 470 7.5e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000359)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48100
fragaria_vesca FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 267
AccB1I GGYRCC 1 cut(s) 365
AccII CGCG 1 cut(s) 753
AccIII TCCGGA 1 cut(s) 470
AciI CCGC 7 cut(s) 495, 557, 669, 753, 915, 1019, 1055
AclWI GGATC 2 cut(s) 354, 1253
AcoI YGGCCR 2 cut(s) 80, 666
AcsI RAATTY 1 cut(s) 1012
AcuI CTGAAG 1 cut(s) 1049
AdeI CACNNNGTG 1 cut(s) 312
AfaI GTAC 5 cut(s) 185, 360, 773, 1061, 1106
AfiI CCNNNNNNNGG 4 cut(s) 388, 891, 1079, 1295
AflIII ACRYGT 2 cut(s) 768, 905
AgsI TTSAA 5 cut(s) 467, 786, 1133, 1243, 1318
AjiI CACGTC 1 cut(s) 1387
AjnI CCWGG 2 cut(s) 607, 1330
AleI CACNNNNGTG 2 cut(s) 98, 1115
AloI GAACNNNNNNTCC 2 cut(s) 991, 1023
AluBI AGCT 8 cut(s) 77, 86, 448, 567, 936, 968, 1123, 1210
AluI AGCT 8 cut(s) 77, 86, 448, 567, 936, 968, 1123, 1210
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 1 cut(s) 192
Alw44I GTGCAC 1 cut(s) 313
AlwI GGATC 2 cut(s) 354, 1253
Aor13HI TCCGGA 1 cut(s) 470
AoxI GGCC 5 cut(s) 80, 666, 893, 1320, 1414
ApaI GGGCCC 1 cut(s) 1418
ApaLI GTGCAC 1 cut(s) 313
ApoI RAATTY 1 cut(s) 1012
ArsI GACNNNNNNTTYG 2 cut(s) 740, 772
AseI ATTAAT 1 cut(s) 51
AspLEI GCGC 2 cut(s) 268, 890
AspS9I GGNCC 8 cut(s) 173, 293, 478, 893, 943, 1234, 1414, 1415
AsuC2I CCSGG 3 cut(s) 171, 519, 892
AsuHPI GGTGA 4 cut(s) 350, 597, 1054, 1102
AsuNHI GCTAGC 2 cut(s) 563, 917
AvaII GGWCC 5 cut(s) 173, 293, 478, 943, 1234
BaeGI GKGCMC 2 cut(s) 317, 1418
BalI TGGCCA 1 cut(s) 82
BanI GGYRCC 1 cut(s) 365
BanII GRGCYC 1 cut(s) 1418
Bbv12I GWGCWC 1 cut(s) 317
BccI CCATC 3 cut(s) 377, 1170, 1362
BcgI CGANNNNNNTGC 1 cut(s) 35
BciT130I CCWGG 2 cut(s) 609, 1332
BcnI CCSGG 3 cut(s) 171, 519, 892
BcoDI GTCTC 1 cut(s) 192
BfaI CTAG 3 cut(s) 564, 918, 948
BfmI CTRYAG 1 cut(s) 672
BisI GCNGC 3 cut(s) 669, 915, 1055
BlsI GCNGC 3 cut(s) 670, 916, 1056
Bme1390I CCNGG 5 cut(s) 171, 519, 609, 892, 1332
Bme18I GGWCC 5 cut(s) 173, 293, 478, 943, 1234
BmgBI CACGTC 1 cut(s) 1387
BmgT120I GGNCC 8 cut(s) 173, 293, 478, 893, 943, 1234, 1414, 1415
BmiI GGNNCC 6 cut(s) 367, 479, 480, 945, 1236, 1416
BmrFI CCNGG 5 cut(s) 171, 519, 609, 892, 1332
BmsI GCATC 5 cut(s) 66, 550, 839, 858, 1180
BmtI GCTAGC 2 cut(s) 567, 921
BpmI CTGGAG 1 cut(s) 1353
BpuEI CTTGAG 1 cut(s) 1404
BpuMI CCSGG 3 cut(s) 171, 519, 892
BsaAI YACGTR 1 cut(s) 771
BsaBI GATNNNNATC 1 cut(s) 528
BsaJI CCNNGG 4 cut(s) 272, 281, 1113, 1330
BsaWI WCCGGW 2 cut(s) 470, 1444
BsaXI ACNNNNNCTCC 4 cut(s) 189, 219, 1112, 1142
Bsc4I CCNNNNNNNGG 4 cut(s) 388, 891, 1079, 1295
Bse1I ACTGG 1 cut(s) 257
Bse3DI GCAATG 2 cut(s) 67, 1348
Bse8I GATNNNNATC 1 cut(s) 528
BseAI TCCGGA 1 cut(s) 470
BseBI CCWGG 2 cut(s) 609, 1332
BseDI CCNNGG 4 cut(s) 272, 281, 1113, 1330
BseGI GGATG 3 cut(s) 57, 565, 1162
BseJI GATNNNNATC 1 cut(s) 528
BseLI CCNNNNNNNGG 4 cut(s) 388, 891, 1079, 1295
BseMI GCAATG 2 cut(s) 67, 1348
BseNI ACTGG 1 cut(s) 257
BseRI GAGGAG 2 cut(s) 53, 1254
BseSI GKGCMC 2 cut(s) 317, 1418
BseYI CCCAGC 1 cut(s) 692
Bsh1236I CGCG 1 cut(s) 753
BshFI GGCC 5 cut(s) 82, 668, 895, 1322, 1416
BshNI GGYRCC 1 cut(s) 365
BsiHKAI GWGCWC 1 cut(s) 317
BsiSI CCGG 6 cut(s) 171, 471, 519, 846, 891, 1445
BslFI GGGAC 6 cut(s) 242, 491, 916, 1096, 1150, 1271
BslI CCNNNNNNNGG 4 cut(s) 388, 891, 1079, 1295
BsmAI GTCTC 1 cut(s) 192
BsmFI GGGAC 6 cut(s) 242, 491, 916, 1096, 1150, 1271
BsnI GGCC 5 cut(s) 82, 668, 895, 1322, 1416
Bsp120I GGGCCC 1 cut(s) 1414
Bsp1286I GDGCHC 2 cut(s) 317, 1418
Bsp13I TCCGGA 1 cut(s) 470
Bsp1407I TGTACA 1 cut(s) 358
Bsp143I GATC 5 cut(s) 346, 432, 523, 600, 1258
Bsp19I CCATGG 1 cut(s) 281
BspACI CCGC 7 cut(s) 495, 557, 669, 753, 915, 1019, 1055
BspANI GGCC 5 cut(s) 82, 668, 895, 1322, 1416
BspEI TCCGGA 1 cut(s) 470
BspFNI CGCG 1 cut(s) 753
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 6 cut(s) 367, 479, 480, 945, 1236, 1416
BspOI GCTAGC 2 cut(s) 567, 921
BspPI GGATC 2 cut(s) 354, 1253
BspT107I GGYRCC 1 cut(s) 365
BsrDI GCAATG 2 cut(s) 67, 1348
BsrGI TGTACA 1 cut(s) 358
BsrI ACTGG 1 cut(s) 257
BssECI CCNNGG 4 cut(s) 272, 281, 1113, 1330
BssMI GATC 5 cut(s) 346, 432, 523, 600, 1258
BssT1I CCWWGG 2 cut(s) 272, 281
Bst2UI CCWGG 2 cut(s) 609, 1332
Bst4CI ACNGT 9 cut(s) 154, 205, 338, 358, 512, 1042, 1117, 1187, 1279
Bst6I CTCTTC 2 cut(s) 810, 1272
BstAUI TGTACA 1 cut(s) 358
BstBAI YACGTR 1 cut(s) 771
BstC8I GCNNGC 6 cut(s) 20, 84, 190, 330, 565, 919
BstDSI CCRYGG 2 cut(s) 281, 1113
BstENI CCTNNNNNAGG 1 cut(s) 1293
BstF5I GGATG 3 cut(s) 57, 565, 1162
BstFNI CGCG 1 cut(s) 753
BstHHI GCGC 2 cut(s) 268, 890
BstKTI GATC 5 cut(s) 349, 435, 526, 603, 1261
BstMAI GTCTC 1 cut(s) 192
BstMBI GATC 5 cut(s) 346, 432, 523, 600, 1258
BstMWI GCNNNNNNNGC 2 cut(s) 83, 674
BstNI CCWGG 2 cut(s) 609, 1332
BstNSI RCATGY 1 cut(s) 332
BstSCI CCNGG 5 cut(s) 169, 517, 607, 890, 1330
BstSFI CTRYAG 1 cut(s) 672
BstSLI GKGCMC 2 cut(s) 317, 1418
BstUI CGCG 1 cut(s) 753
BstXI CCANNNNNNTGG 1 cut(s) 257
BsuRI GGCC 5 cut(s) 82, 668, 895, 1322, 1416
BtgI CCRYGG 2 cut(s) 281, 1113
BtrI CACGTC 1 cut(s) 1387
BtsCI GGATG 3 cut(s) 57, 565, 1162
BtsI GCAGTG 2 cut(s) 317, 633
BtsIMutI CAGTG 4 cut(s) 250, 317, 354, 633
Cac8I GCNNGC 6 cut(s) 20, 84, 190, 330, 565, 919
CciI TCATGA 1 cut(s) 418
CfoI GCGC 2 cut(s) 268, 890
Cfr13I GGNCC 8 cut(s) 173, 293, 478, 893, 943, 1234, 1414, 1415
CpoI CGGWCCG 1 cut(s) 173
CsiI ACCWGGT 1 cut(s) 607
Csp6I GTAC 5 cut(s) 184, 359, 772, 1060, 1105
CspI CGGWCCG 1 cut(s) 173
CviQI GTAC 5 cut(s) 184, 359, 772, 1060, 1105
DpnI GATC 5 cut(s) 348, 434, 525, 602, 1260
DpnII GATC 5 cut(s) 346, 432, 523, 600, 1258
DraIII CACNNNGTG 1 cut(s) 312
EaeI YGGCCR 2 cut(s) 80, 666
Eam1104I CTCTTC 2 cut(s) 810, 1272
EarI CTCTTC 2 cut(s) 810, 1272
EciI GGCGGA 1 cut(s) 572
Eco130I CCWWGG 2 cut(s) 272, 281
Eco24I GRGCYC 1 cut(s) 1418
Eco47I GGWCC 5 cut(s) 173, 293, 478, 943, 1234
Eco57I CTGAAG 1 cut(s) 1049
EcoNI CCTNNNNNAGG 1 cut(s) 1293
EcoO109I RGGNCCY 4 cut(s) 478, 1234, 1414, 1415
EcoRII CCWGG 2 cut(s) 607, 1330
EcoT14I CCWWGG 2 cut(s) 272, 281
EcoT22I ATGCAT 3 cut(s) 832, 1173, 1350
EcoT38I GRGCYC 1 cut(s) 1418
ErhI CCWWGG 2 cut(s) 272, 281
FaqI GGGAC 6 cut(s) 242, 491, 916, 1096, 1150, 1271
FauI CCCGC 2 cut(s) 746, 1026
FauNDI CATATG 1 cut(s) 1368
Fnu4HI GCNGC 3 cut(s) 669, 915, 1055
FokI GGATG 3 cut(s) 44, 572, 1149
FriOI GRGCYC 1 cut(s) 1418
Fsp4HI GCNGC 3 cut(s) 669, 915, 1055
FspBI CTAG 3 cut(s) 564, 918, 948
FspI TGCGCA 1 cut(s) 267
GlaI GCGC 2 cut(s) 267, 889
GluI GCNGC 3 cut(s) 669, 915, 1055
GsaI CCCAGC 1 cut(s) 696
GsuI CTGGAG 1 cut(s) 1353
HaeIII GGCC 5 cut(s) 82, 668, 895, 1322, 1416
HapII CCGG 6 cut(s) 171, 471, 519, 846, 891, 1445
HhaI GCGC 2 cut(s) 268, 890
Hin6I GCGC 2 cut(s) 266, 888
HinP1I GCGC 2 cut(s) 266, 888
HincII GTYRAC 3 cut(s) 515, 859, 985
HindII GTYRAC 3 cut(s) 515, 859, 985
HindIII AAGCTT 3 cut(s) 75, 446, 966
HinfI GANTC 4 cut(s) 277, 542, 1069, 1314
HpaII CCGG 6 cut(s) 171, 471, 519, 846, 891, 1445
HphI GGTGA 4 cut(s) 350, 597, 1054, 1102
Hpy166II GTNNAC 7 cut(s) 315, 515, 774, 859, 925, 943, 985
Hpy188I TCNGA 6 cut(s) 289, 541, 645, 1068, 1074, 1272
Hpy188III TCNNGA 4 cut(s) 419, 430, 471, 1358
Hpy8I GTNNAC 7 cut(s) 315, 515, 774, 859, 925, 943, 985
Hpy99I CGWCG 1 cut(s) 215
HpyAV CCTTC 5 cut(s) 789, 801, 1039, 1073, 1087
HpyCH4III ACNGT 9 cut(s) 154, 205, 338, 358, 512, 1042, 1117, 1187, 1279
HpyCH4IV ACGT 3 cut(s) 770, 907, 1386
HpyCH4V TGCA 8 cut(s) 22, 315, 739, 830, 1171, 1177, 1292, 1348
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 674
HpySE526I ACGT 3 cut(s) 770, 907, 1386
HspAI GCGC 2 cut(s) 266, 888
KflI GGGWCCC 1 cut(s) 478
Kpn2I TCCGGA 1 cut(s) 470
Kzo9I GATC 5 cut(s) 346, 432, 523, 600, 1258
LmnI GCTCC 2 cut(s) 1120, 1207
LweI GCATC 5 cut(s) 66, 550, 839, 858, 1180
MabI ACCWGGT 1 cut(s) 607
MaeI CTAG 3 cut(s) 564, 918, 948
MaeII ACGT 3 cut(s) 770, 907, 1386
MaeIII GTNAC 6 cut(s) 89, 236, 703, 1181, 1387, 1431
MalI GATC 5 cut(s) 348, 434, 525, 602, 1260
MboI GATC 5 cut(s) 346, 432, 523, 600, 1258
MboII GAAGA 6 cut(s) 16, 119, 434, 774, 797, 1259
MhlI GDGCHC 2 cut(s) 317, 1418
MlsI TGGCCA 1 cut(s) 82
MluCI AATT 9 cut(s) 397, 487, 763, 838, 880, 951, 1012, 1033, 1141
MluNI TGGCCA 1 cut(s) 82
MmeI TCCRAC 2 cut(s) 267, 1180
Mox20I TGGCCA 1 cut(s) 82
Mph1103I ATGCAT 3 cut(s) 832, 1173, 1350
MroI TCCGGA 1 cut(s) 470
MscI TGGCCA 1 cut(s) 82
MseI TTAA 6 cut(s) 51, 222, 507, 837, 1032, 1462
MslI CAYNNNNRTG 5 cut(s) 98, 255, 1115, 1176, 1385
Msp20I TGGCCA 1 cut(s) 82
MspA1I CMGCKG 1 cut(s) 1057
MspI CCGG 6 cut(s) 171, 471, 519, 846, 891, 1445
MspR9I CCNGG 5 cut(s) 171, 519, 609, 892, 1332
MvaI CCWGG 2 cut(s) 609, 1332
MvnI CGCG 1 cut(s) 753
MwoI GCNNNNNNNGC 2 cut(s) 83, 674
NciI CCSGG 3 cut(s) 171, 519, 892
NcoI CCATGG 1 cut(s) 281
NdeI CATATG 1 cut(s) 1368
NdeII GATC 5 cut(s) 346, 432, 523, 600, 1258
NheI GCTAGC 2 cut(s) 563, 917
NlaIV GGNNCC 6 cut(s) 367, 479, 480, 945, 1236, 1416
NmuCI GTSAC 1 cut(s) 1387
NsbI TGCGCA 1 cut(s) 267
NsiI ATGCAT 3 cut(s) 832, 1173, 1350
NspI RCATGY 1 cut(s) 332
OliI CACNNNNGTG 2 cut(s) 98, 1115
PaeI GCATGC 1 cut(s) 332
PagI TCATGA 1 cut(s) 418
PcsI WCGNNNNNNNCGW 1 cut(s) 918
PfeI GAWTC 4 cut(s) 277, 542, 1069, 1314
PflFI GACNNNGTC 1 cut(s) 203
PfoI TCCNGGA 1 cut(s) 169
PkrI GCNGC 3 cut(s) 670, 916, 1056
Ppu21I YACGTR 1 cut(s) 771
PpuMI RGGWCCY 2 cut(s) 478, 1234
PshBI ATTAAT 1 cut(s) 51
Psp5II RGGWCCY 2 cut(s) 478, 1234
Psp6I CCWGG 2 cut(s) 607, 1330
PspFI CCCAGC 1 cut(s) 692
PspGI CCWGG 2 cut(s) 607, 1330
PspN4I GGNNCC 6 cut(s) 367, 479, 480, 945, 1236, 1416
PspOMI GGGCCC 1 cut(s) 1414
PspPI GGNCC 8 cut(s) 173, 293, 478, 893, 943, 1234, 1414, 1415
PspPPI RGGWCCY 2 cut(s) 478, 1234
PsyI GACNNNGTC 1 cut(s) 203
RsaI GTAC 5 cut(s) 185, 360, 773, 1061, 1106
RsaNI GTAC 5 cut(s) 184, 359, 772, 1060, 1105
RseI CAYNNNNRTG 5 cut(s) 98, 255, 1115, 1176, 1385
Rsr2I CGGWCCG 1 cut(s) 173
RsrII CGGWCCG 1 cut(s) 173
SaqAI TTAA 6 cut(s) 51, 222, 507, 837, 1032, 1462
SatI GCNGC 3 cut(s) 669, 915, 1055
Sau3AI GATC 5 cut(s) 346, 432, 523, 600, 1258
Sau96I GGNCC 8 cut(s) 173, 293, 478, 893, 943, 1234, 1414, 1415
ScrFI CCNGG 5 cut(s) 171, 519, 609, 892, 1332
SduI GDGCHC 2 cut(s) 317, 1418
SexAI ACCWGGT 1 cut(s) 607
SfaNI GCATC 5 cut(s) 66, 550, 839, 858, 1180
SfcI CTRYAG 1 cut(s) 672
SinI GGWCC 5 cut(s) 173, 293, 478, 943, 1234
SmiMI CAYNNNNRTG 5 cut(s) 98, 255, 1115, 1176, 1385
SmlI CTYRAG 1 cut(s) 1419
SmoI CTYRAG 1 cut(s) 1419
SphI GCATGC 1 cut(s) 332
Sse9I AATT 9 cut(s) 397, 487, 763, 838, 880, 951, 1012, 1033, 1141
SsiI CCGC 7 cut(s) 495, 557, 669, 753, 915, 1019, 1055
SspMI CTAG 3 cut(s) 564, 918, 948
StyD4I CCNGG 5 cut(s) 169, 517, 607, 890, 1330
StyI CCWWGG 2 cut(s) 272, 281
TaaI ACNGT 9 cut(s) 154, 205, 338, 358, 512, 1042, 1117, 1187, 1279
TaiI ACGT 3 cut(s) 773, 910, 1389
TaqI TCGA 5 cut(s) 11, 213, 349, 599, 1257
TaqII GACCGA 1 cut(s) 190
TasI AATT 9 cut(s) 397, 487, 763, 838, 880, 951, 1012, 1033, 1141
TatI WGTACW 2 cut(s) 358, 1104
TauI GCSGC 3 cut(s) 671, 917, 1057
TfiI GAWTC 4 cut(s) 277, 542, 1069, 1314
Tru1I TTAA 6 cut(s) 51, 222, 507, 837, 1032, 1462
Tru9I TTAA 6 cut(s) 51, 222, 507, 837, 1032, 1462
TscAI CASTG 4 cut(s) 257, 317, 361, 640
TseFI GTSAC 1 cut(s) 1387
Tsp45I GTSAC 1 cut(s) 1387
TspDTI ATGAA 3 cut(s) 17, 435, 1384
TspGWI ACGGA 3 cut(s) 306, 844, 1100
TspRI CASTG 4 cut(s) 257, 317, 361, 640
Tth111I GACNNNGTC 1 cut(s) 203
VneI GTGCAC 1 cut(s) 313
VpaK11BI GGWCC 5 cut(s) 173, 293, 478, 943, 1234
VspI ATTAAT 1 cut(s) 51
XagI CCTNNNNNAGG 1 cut(s) 1293
XapI RAATTY 1 cut(s) 1012
XceI RCATGY 1 cut(s) 332
XcmI CCANNNNNNNNNTGG 1 cut(s) 279
XspI CTAG 3 cut(s) 564, 918, 948
Zsp2I ATGCAT 3 cut(s) 832, 1173, 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.