RchiOBHm_Chr2g0120971

Lignin degradation and detoxification of lignin-derived products

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
33819021 .. 33821212
2192 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ49355

Sequence Viewer

Length: 1704 bp
ATGAAGGTTTCCAGAATTACCCTGCATCTGCAACTTCTGGGGTTGTTATTGGCTGTTAATGGCTTCCTCCATTGCCAAGCTTGGCCAGTTCGTTACACTTTTGTGGTGGAAAACACTCCATACAAAAGACTCTGCACCACAAAGAACATCTTGACTGTAAATGGCCAGTTTCCGGGACCGACATTGTATGTTCACAAAGGAGACACTATCATCGTCGATGTCTTTAACAAAGGCAATCGTAACATTACTATCCACTGGCATGGTGTTGCGCAACCAAGATATCCATGGTCGGACGGACCAGACTATATCACACAGTGCCCAATTCAACCGGGAGCCAAGTTCACCCAAAAGATCATTTTCTCAAAGGAGGAAGGCACCCTTTGGTGGCATGCTCACAGTGAGTGGGATCGAGCCACTGTCCACGGTCCCATCATCATATACCCCAACAAGAAGAAGAATTACCCCTTTTCCAAGCCTCATGCAGAAATTCCAATCATATTCGGAGAGTGGTGGAAGGTAGATATAGGGAACCTTTATACTCAAACTCTTCAGGCCGGAGGGGAACCTAATACTTCCGACGCTTATCTCATCAATGGTCAACCTGGCGATCTGTATCCATGCTCTAAATCAGAGATGTGCAAGGTGATGGTTGATTATGGCAAAACCTACCTACTGAGACTAATCAACTCCGGTCTGCAAGAGATTCTGTTTTTCGCCATCGCCAATCACAAAGTTACAGTTGTAGGGACAGATGCTAGCTACACCAAGCCTTTCACAACTGATTATGTCACCATCTCACCAGGTCAAACCATTGACCTTTTGCTCCATGCTAATCAGAGGCCTAACCACTACTACATGGCCGCTACAGTCTACGGAGGTGGCGCTGGTCCTTATGATAACACCACCACAGCCCTACTACAATACACAAATCGGGGTTACACCCCTTCTTCAACCCCTTTGTTTCCTGATCTTCCTGCTCACAATGACACTAATGCATCAGTTCATTTCAGTGGTAGTCTCAGGAGCTTGGCTGATAAAAACCACCCCATTGACGTTCCACTAAAAATTACAACTCCCTTGTTTTATACCGTCTCCATCAACACGTTCCAGTGCCCCAATAATTCATGTTCTGGGCCTAATGGAACGCGTCTGGCCGCTAGTGTGAATAACATTAGCTTTGTGAACCCTAGCATTGACATACTACAAGCTTACTATTATCATGTCAACGGGGTATTTGGAACTCGGTTTCCAGATTTCCCGCCTTTGCTGTTTAACTTTACAGCGCAGTACTTCCCGCTGTACCTTCAGACCCCGAAACGAGGGACAGAAGTGCAGGTACTGGAGTACAACGCGACTGTGGAGCTCGTGTTTCAGGGGACTAATTTGGTGGCAGGGGATGACCATCCAATGCATCTTCATGGTTACAGTTTCTATGTGGTTGGATTGGGGCTTGGGAACTTTGACAAGGATAAGGACCCTTTGAAATACAATCTTGTTGATCCTCCTCTTCAAAACACCATTGCTGTCCCTGTAAATGGGTGGGCTACCATCAGATTCAAGGCTGACAATCCTGGAGTTTGGTTTATGCATTGCCATCTGGACAAGCATATGTCATGGGGCATGGATACGACATTCATAGTAAAAAATGGAAAGGGACCTAAAGCACAAATCTTGCCTCCACCACCAGATATGCCACCTTGCTGA

Protein Analysis

567

Amino Acids

63.47

Weight (kDa)

7.97

Isoelectric Point (pI)

30.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 36 - 150 7.8e-40 Multicopper oxidase
Cu-oxidase PF00394 163 - 310 3e-37 Multicopper oxidase
Cu-oxidase_2 PF07731 417 - 550 6.5e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000359)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48100
fragaria_vesca FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 270
Acc36I ACCTGC 1 cut(s) 1324
AccB1I GGYRCC 1 cut(s) 374
AccI GTMKAC 1 cut(s) 870
AccII CGCG 2 cut(s) 1147, 1352
AciI CCGC 4 cut(s) 861, 1155, 1259, 1295
AclWI GGATC 2 cut(s) 414, 1493
AcoI YGGCCR 4 cut(s) 83, 163, 858, 1152
AcsI RAATTY 1 cut(s) 486
AcuI CTGAAG 2 cut(s) 533, 1289
AdeI CACNNNGTG 1 cut(s) 315
AfaI GTAC 4 cut(s) 1289, 1301, 1338, 1346
AfiI CCNNNNNNNGG 4 cut(s) 172, 384, 1319, 1535
AflIII ACRYGT 2 cut(s) 1101, 1145
AgsI TTSAA 5 cut(s) 326, 951, 1483, 1511, 1558
AjnI CCWGG 3 cut(s) 601, 799, 1570
AleI CACNNNNGTG 1 cut(s) 101
AloI GAACNNNNNNTCC 2 cut(s) 1231, 1263
AluBI AGCT 6 cut(s) 80, 759, 1026, 1176, 1208, 1363
AluI AGCT 6 cut(s) 80, 759, 1026, 1176, 1208, 1363
Alw21I GWGCWC 1 cut(s) 1365
Alw26I GTCTC 4 cut(s) 195, 670, 1022, 1096
AlwI GGATC 2 cut(s) 414, 1493
AlwNI CAGNNNCTG 1 cut(s) 1339
AoxI GGCC 7 cut(s) 83, 163, 552, 839, 858, 1133, 1152
ApoI RAATTY 1 cut(s) 486
AspLEI GCGC 3 cut(s) 271, 884, 1285
AspS9I GGNCC 7 cut(s) 176, 296, 425, 887, 1133, 1474, 1655
AsuC2I CCSGG 2 cut(s) 174, 330
AsuHPI GGTGA 4 cut(s) 334, 655, 781, 789
AsuNHI GCTAGC 1 cut(s) 755
AvaII GGWCC 6 cut(s) 176, 296, 425, 887, 1474, 1655
BaeGI GKGCMC 2 cut(s) 320, 1115
BaeI ACNNNNGTAYC 2 cut(s) 1328, 1361
BalI TGGCCA 2 cut(s) 85, 165
BanI GGYRCC 1 cut(s) 374
BanII GRGCYC 1 cut(s) 1365
BarI GAAGNNNNNNTAC 4 cut(s) 443, 475, 1320, 1352
BauI CACGAG 1 cut(s) 1364
Bbv12I GWGCWC 1 cut(s) 1365
BccI CCATC 8 cut(s) 437, 640, 725, 800, 1103, 1410, 1556, 1602
BciT130I CCWGG 3 cut(s) 603, 801, 1572
BciVI GTATCC 2 cut(s) 624, 1618
BcnI CCSGG 2 cut(s) 174, 330
BcoDI GTCTC 4 cut(s) 195, 670, 1022, 1096
BfaI CTAG 3 cut(s) 756, 1158, 1188
BfmI CTRYAG 1 cut(s) 864
BfoI RGCGCY 1 cut(s) 885
BfuAI ACCTGC 1 cut(s) 1324
BfuI GTATCC 2 cut(s) 624, 1618
BisI GCNGC 2 cut(s) 861, 1155
BlsI GCNGC 2 cut(s) 862, 1156
BmcAI AGTACT 1 cut(s) 1289
Bme1390I CCNGG 5 cut(s) 174, 330, 603, 801, 1572
Bme18I GGWCC 6 cut(s) 176, 296, 425, 887, 1474, 1655
BmgT120I GGNCC 7 cut(s) 176, 296, 425, 887, 1133, 1474, 1655
BmiI GGNNCC 8 cut(s) 177, 334, 376, 427, 530, 564, 1476, 1656
BmrFI CCNGG 5 cut(s) 174, 330, 603, 801, 1572
BmsI GCATC 4 cut(s) 34, 742, 1004, 1420
BmtI GCTAGC 1 cut(s) 759
BpmI CTGGAG 2 cut(s) 1361, 1593
BpuMI CCSGG 2 cut(s) 174, 330
BsaBI GATNNNNATC 2 cut(s) 612, 1401
BsaJI CCNNGG 2 cut(s) 284, 421
BsaWI WCCGGW 1 cut(s) 689
BsaXI ACNNNNNCTCC 2 cut(s) 1352, 1382
Bsc4I CCNNNNNNNGG 4 cut(s) 172, 384, 1319, 1535
Bse1I ACTGG 5 cut(s) 86, 166, 260, 1108, 1344
Bse3DI GCAATG 3 cut(s) 70, 1518, 1588
Bse8I GATNNNNATC 2 cut(s) 612, 1401
BseBI CCWGG 3 cut(s) 603, 801, 1572
BseDI CCNNGG 2 cut(s) 284, 421
BseGI GGATG 2 cut(s) 1402, 1402
BseJI GATNNNNATC 2 cut(s) 612, 1401
BseLI CCNNNNNNNGG 4 cut(s) 172, 384, 1319, 1535
BseMI GCAATG 3 cut(s) 70, 1518, 1588
BseMII CTCAG 2 cut(s) 665, 1033
BseNI ACTGG 5 cut(s) 86, 166, 260, 1108, 1344
BseRI GAGGAG 1 cut(s) 1494
BseSI GKGCMC 2 cut(s) 320, 1115
BsgI GTGCAG 2 cut(s) 118, 1352
Bsh1236I CGCG 2 cut(s) 1147, 1352
BshFI GGCC 7 cut(s) 85, 165, 554, 841, 860, 1135, 1154
BshNI GGYRCC 1 cut(s) 374
BsiHKAI GWGCWC 1 cut(s) 1365
BsiSI CCGG 4 cut(s) 173, 329, 555, 690
BslFI GGGAC 7 cut(s) 189, 411, 760, 1336, 1390, 1511, 1668
BslI CCNNNNNNNGG 4 cut(s) 172, 384, 1319, 1535
BsmAI GTCTC 4 cut(s) 195, 670, 1022, 1096
BsmBI CGTCTC 1 cut(s) 1096
BsmFI GGGAC 7 cut(s) 189, 411, 760, 1336, 1390, 1511, 1668
BsnI GGCC 7 cut(s) 85, 165, 554, 841, 860, 1135, 1154
Bsp1286I GDGCHC 3 cut(s) 320, 1115, 1365
Bsp143I GATC 5 cut(s) 351, 406, 607, 967, 1498
Bsp19I CCATGG 1 cut(s) 284
BspACI CCGC 4 cut(s) 861, 1155, 1259, 1295
BspANI GGCC 7 cut(s) 85, 165, 554, 841, 860, 1135, 1154
BspCNI CTCAG 2 cut(s) 666, 1032
BspFNI CGCG 2 cut(s) 1147, 1352
BspLI GGNNCC 8 cut(s) 177, 334, 376, 427, 530, 564, 1476, 1656
BspMI ACCTGC 1 cut(s) 1324
BspOI GCTAGC 1 cut(s) 759
BspPI GGATC 2 cut(s) 414, 1493
BspT107I GGYRCC 1 cut(s) 374
BsrDI GCAATG 3 cut(s) 70, 1518, 1588
BsrI ACTGG 5 cut(s) 86, 166, 260, 1108, 1344
BssECI CCNNGG 2 cut(s) 284, 421
BssMI GATC 5 cut(s) 351, 406, 607, 967, 1498
BssSI CACGAG 1 cut(s) 1364
BssT1I CCWWGG 1 cut(s) 284
Bst2BI CACGAG 1 cut(s) 1364
Bst2UI CCWGG 3 cut(s) 603, 801, 1572
Bst6I CTCTTC 2 cut(s) 552, 1512
BstC8I GCNNGC 2 cut(s) 390, 757
BstDEI CTNAG 2 cut(s) 674, 1019
BstDSI CCRYGG 2 cut(s) 284, 421
BstF5I GGATG 2 cut(s) 1402, 1402
BstFNI CGCG 2 cut(s) 1147, 1352
BstH2I RGCGCY 1 cut(s) 885
BstHHI GCGC 3 cut(s) 271, 884, 1285
BstKTI GATC 5 cut(s) 354, 409, 610, 970, 1501
BstMAI GTCTC 4 cut(s) 195, 670, 1022, 1096
BstMBI GATC 5 cut(s) 351, 406, 607, 967, 1498
BstNI CCWGG 3 cut(s) 603, 801, 1572
BstNSI RCATGY 1 cut(s) 392
BstSCI CCNGG 5 cut(s) 172, 328, 601, 799, 1570
BstSFI CTRYAG 1 cut(s) 864
BstSLI GKGCMC 2 cut(s) 320, 1115
BstUI CGCG 2 cut(s) 1147, 1352
BstXI CCANNNNNNTGG 1 cut(s) 260
BsuI GTATCC 2 cut(s) 624, 1618
BsuRI GGCC 7 cut(s) 85, 165, 554, 841, 860, 1135, 1154
BtgI CCRYGG 2 cut(s) 284, 421
BtgZI GCGATG 1 cut(s) 703
BtsCI GGATG 2 cut(s) 1402, 1402
BtsIMutI CAGTG 6 cut(s) 253, 320, 403, 414, 1015, 1115
BveI ACCTGC 1 cut(s) 1324
Cac8I GCNNGC 2 cut(s) 390, 757
CaiI CAGNNNCTG 1 cut(s) 1339
CfoI GCGC 3 cut(s) 271, 884, 1285
Cfr13I GGNCC 7 cut(s) 176, 296, 425, 887, 1133, 1474, 1655
CseI GACGC 2 cut(s) 587, 1136
CsiI ACCWGGT 1 cut(s) 799
Csp6I GTAC 4 cut(s) 1288, 1300, 1337, 1345
CviQI GTAC 4 cut(s) 1288, 1300, 1337, 1345
DdeI CTNAG 2 cut(s) 674, 1019
DpnI GATC 5 cut(s) 353, 408, 609, 969, 1500
DpnII GATC 5 cut(s) 351, 406, 607, 967, 1498
DraIII CACNNNGTG 1 cut(s) 315
EaeI YGGCCR 4 cut(s) 83, 163, 858, 1152
Eam1104I CTCTTC 2 cut(s) 552, 1512
EarI CTCTTC 2 cut(s) 552, 1512
Ecl136II GAGCTC 1 cut(s) 1363
Eco130I CCWWGG 1 cut(s) 284
Eco147I AGGCCT 1 cut(s) 841
Eco24I GRGCYC 1 cut(s) 1365
Eco32I GATATC 1 cut(s) 281
Eco47I GGWCC 6 cut(s) 176, 296, 425, 887, 1474, 1655
Eco53kI GAGCTC 1 cut(s) 1363
Eco57I CTGAAG 2 cut(s) 533, 1289
EcoICRI GAGCTC 1 cut(s) 1363
EcoO109I RGGNCCY 2 cut(s) 1474, 1655
EcoRII CCWGG 3 cut(s) 601, 799, 1570
EcoRV GATATC 1 cut(s) 281
EcoT14I CCWWGG 1 cut(s) 284
EcoT22I ATGCAT 3 cut(s) 997, 1413, 1590
EcoT38I GRGCYC 1 cut(s) 1365
ErhI CCWWGG 1 cut(s) 284
Esp3I CGTCTC 1 cut(s) 1096
FalI AAGNNNNNCTT 4 cut(s) 134, 166, 363, 395
FaqI GGGAC 7 cut(s) 189, 411, 760, 1336, 1390, 1511, 1668
FauI CCCGC 2 cut(s) 1266, 1302
FauNDI CATATG 1 cut(s) 1608
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 2 cut(s) 861, 1155
FokI GGATG 2 cut(s) 1389, 1409
FriOI GRGCYC 1 cut(s) 1365
Fsp4HI GCNGC 2 cut(s) 861, 1155
FspBI CTAG 3 cut(s) 756, 1158, 1188
FspI TGCGCA 1 cut(s) 270
GlaI GCGC 3 cut(s) 270, 883, 1284
GluI GCNGC 2 cut(s) 861, 1155
GsuI CTGGAG 2 cut(s) 1361, 1593
HaeII RGCGCY 1 cut(s) 885
HaeIII GGCC 7 cut(s) 85, 165, 554, 841, 860, 1135, 1154
HapII CCGG 4 cut(s) 173, 329, 555, 690
HgaI GACGC 2 cut(s) 587, 1136
HhaI GCGC 3 cut(s) 271, 884, 1285
Hin6I GCGC 3 cut(s) 269, 882, 1283
HinP1I GCGC 3 cut(s) 269, 882, 1283
HincII GTYRAC 2 cut(s) 599, 1225
HindII GTYRAC 2 cut(s) 599, 1225
HindIII AAGCTT 2 cut(s) 78, 1206
HinfI GANTC 3 cut(s) 129, 703, 1554
HpaII CCGG 4 cut(s) 173, 329, 555, 690
HphI GGTGA 4 cut(s) 334, 655, 781, 789
Hpy166II GTNNAC 7 cut(s) 193, 342, 421, 599, 871, 1183, 1225
Hpy188I TCNGA 7 cut(s) 292, 503, 577, 631, 837, 1308, 1553
Hpy188III TCNNGA 6 cut(s) 12, 151, 965, 1021, 1250, 1598
Hpy8I GTNNAC 7 cut(s) 193, 342, 421, 599, 871, 1183, 1225
Hpy99I CGWCG 2 cut(s) 218, 581
HpyAV CCTTC 4 cut(s) 365, 508, 954, 1313
HpyCH4IV ACGT 2 cut(s) 1053, 1103
HpyF3I CTNAG 2 cut(s) 674, 1019
HpySE526I ACGT 2 cut(s) 1053, 1103
HspAI GCGC 3 cut(s) 269, 882, 1283
Kzo9I GATC 5 cut(s) 351, 406, 607, 967, 1498
LmnI GCTCC 4 cut(s) 332, 828, 1023, 1360
LweI GCATC 4 cut(s) 34, 742, 1004, 1420
MabI ACCWGGT 1 cut(s) 799
MaeI CTAG 3 cut(s) 756, 1158, 1188
MaeII ACGT 2 cut(s) 1053, 1103
MaeIII GTNAC 6 cut(s) 92, 239, 733, 787, 935, 1421
MalI GATC 5 cut(s) 353, 408, 609, 969, 1500
MboI GATC 5 cut(s) 351, 406, 607, 967, 1498
MboII GAAGA 7 cut(s) 463, 466, 539, 939, 962, 1406, 1499
MhlI GDGCHC 3 cut(s) 320, 1115, 1365
MlsI TGGCCA 2 cut(s) 85, 165
MluCI AATT 7 cut(s) 15, 321, 457, 486, 1065, 1120, 1381
MluI ACGCGT 1 cut(s) 1145
MluNI TGGCCA 2 cut(s) 85, 165
MlyI GAGTC 1 cut(s) 123
MmeI TCCRAC 3 cut(s) 270, 600, 1420
Mox20I TGGCCA 2 cut(s) 85, 165
Mph1103I ATGCAT 3 cut(s) 997, 1413, 1590
MscI TGGCCA 2 cut(s) 85, 165
MseI TTAA 3 cut(s) 57, 225, 1272
MslI CAYNNNNRTG 4 cut(s) 101, 258, 1008, 1416
Msp20I TGGCCA 2 cut(s) 85, 165
MspA1I CMGCKG 1 cut(s) 1297
MspI CCGG 4 cut(s) 173, 329, 555, 690
MspR9I CCNGG 5 cut(s) 174, 330, 603, 801, 1572
MvaI CCWGG 3 cut(s) 603, 801, 1572
MvnI CGCG 2 cut(s) 1147, 1352
NciI CCSGG 2 cut(s) 174, 330
NcoI CCATGG 1 cut(s) 284
NdeI CATATG 1 cut(s) 1608
NdeII GATC 5 cut(s) 351, 406, 607, 967, 1498
NheI GCTAGC 1 cut(s) 755
NlaIV GGNNCC 8 cut(s) 177, 334, 376, 427, 530, 564, 1476, 1656
NmuCI GTSAC 1 cut(s) 787
NsbI TGCGCA 1 cut(s) 270
NsiI ATGCAT 3 cut(s) 997, 1413, 1590
NspI RCATGY 1 cut(s) 392
OliI CACNNNNGTG 1 cut(s) 101
PaeI GCATGC 1 cut(s) 392
PceI AGGCCT 1 cut(s) 841
PfeI GAWTC 2 cut(s) 703, 1554
PfoI TCCNGGA 2 cut(s) 172, 1570
PkrI GCNGC 2 cut(s) 862, 1156
PleI GAGTC 1 cut(s) 123
PpsI GAGTC 1 cut(s) 123
PpuMI RGGWCCY 2 cut(s) 1474, 1655
Psp124BI GAGCTC 1 cut(s) 1365
Psp5II RGGWCCY 2 cut(s) 1474, 1655
Psp6I CCWGG 3 cut(s) 601, 799, 1570
PspGI CCWGG 3 cut(s) 601, 799, 1570
PspN4I GGNNCC 8 cut(s) 177, 334, 376, 427, 530, 564, 1476, 1656
PspPI GGNCC 7 cut(s) 176, 296, 425, 887, 1133, 1474, 1655
PspPPI RGGWCCY 2 cut(s) 1474, 1655
PstNI CAGNNNCTG 1 cut(s) 1339
RsaI GTAC 4 cut(s) 1289, 1301, 1338, 1346
RsaNI GTAC 4 cut(s) 1288, 1300, 1337, 1345
RseI CAYNNNNRTG 4 cut(s) 101, 258, 1008, 1416
SacI GAGCTC 1 cut(s) 1365
SaqAI TTAA 3 cut(s) 57, 225, 1272
SatI GCNGC 2 cut(s) 861, 1155
Sau3AI GATC 5 cut(s) 351, 406, 607, 967, 1498
Sau96I GGNCC 7 cut(s) 176, 296, 425, 887, 1133, 1474, 1655
ScaI AGTACT 1 cut(s) 1289
SchI GAGTC 1 cut(s) 123
ScrFI CCNGG 5 cut(s) 174, 330, 603, 801, 1572
SduI GDGCHC 3 cut(s) 320, 1115, 1365
SexAI ACCWGGT 1 cut(s) 799
SfaNI GCATC 4 cut(s) 34, 742, 1004, 1420
SfcI CTRYAG 1 cut(s) 864
SinI GGWCC 6 cut(s) 176, 296, 425, 887, 1474, 1655
SmiMI CAYNNNNRTG 4 cut(s) 101, 258, 1008, 1416
SphI GCATGC 1 cut(s) 392
Sse9I AATT 7 cut(s) 15, 321, 457, 486, 1065, 1120, 1381
SseBI AGGCCT 1 cut(s) 841
SsiI CCGC 4 cut(s) 861, 1155, 1259, 1295
SspMI CTAG 3 cut(s) 756, 1158, 1188
SstI GAGCTC 1 cut(s) 1365
StuI AGGCCT 1 cut(s) 841
StyD4I CCNGG 5 cut(s) 172, 328, 601, 799, 1570
StyI CCWWGG 1 cut(s) 284
TaiI ACGT 2 cut(s) 1056, 1106
TaqI TCGA 2 cut(s) 216, 409
TaqII GACCGA 1 cut(s) 193
TasI AATT 7 cut(s) 15, 321, 457, 486, 1065, 1120, 1381
TatI WGTACW 2 cut(s) 1287, 1344
TauI GCSGC 2 cut(s) 863, 1157
TfiI GAWTC 2 cut(s) 703, 1554
Tru1I TTAA 3 cut(s) 57, 225, 1272
Tru9I TTAA 3 cut(s) 57, 225, 1272
TscAI CASTG 6 cut(s) 260, 320, 403, 421, 1015, 1115
TseFI GTSAC 1 cut(s) 787
Tsp45I GTSAC 1 cut(s) 787
TspDTI ATGAA 5 cut(s) 17, 992, 1113, 1406, 1624
TspGWI ACGGA 2 cut(s) 309, 888
TspRI CASTG 6 cut(s) 260, 320, 403, 421, 1015, 1115
VpaK11BI GGWCC 6 cut(s) 176, 296, 425, 887, 1474, 1655
XapI RAATTY 1 cut(s) 486
XceI RCATGY 1 cut(s) 392
XcmI CCANNNNNNNNNTGG 1 cut(s) 282
XmiI GTMKAC 1 cut(s) 870
XspI CTAG 3 cut(s) 756, 1158, 1188
ZrmI AGTACT 1 cut(s) 1289
Zsp2I ATGCAT 3 cut(s) 997, 1413, 1590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.