Rh2CG279100

Lignin degradation and detoxification of lignin-derived products

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
30932098 .. 30934514
2417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG279100.1

Sequence Viewer

Length: 1710 bp
ATGAAGGTTTCCAGAATTAGCCTGCATCTGCAACTTTTGGGGTTGTTATTGGCTGTTAATGGCTTCCTCCTCCATTGCCAAGCTTGGCCAGCTCGTTACACTTTTGTGGTGGAAAACACTCCATACAAAAGACTCTGCAGCACAAAGAACATCTTGACTGTAAATGGCCAGTTTCCGGGACCGACTTTGCATGTTCATAAAGGACACACTATCATCGTCAATGTCTTTAACAAAGGCAATCGTAACATTACTATTCACTGGCATGGTGTTGCGCAACCAAGAAATCCATGGTCGGACGGACCAGAGTATATCACACAATGCCCAATTCAACCGGGAGCCAAGTTCACCCAAAAGATCATTTTCTCAAAGGAGGAAGGCACCCTTTGGTGGCATGCTCACAGTGAGTGGGATCGAGCCACTGTCCACGGTCCCATCATCATATACCCCAACAAGAAGAAGAATTACCCTTTTGGCAAGCCTCATGCAGAAATTCCAATCATATTGGGAGAGTGGTGGAAGGTAGATATAGGGAACCTTTATACTCAAACTCTTCAAGCCGGAGGGGAACCTAATACTTCCGACGCTTATCTCATCAATGGTCAACCTGGCGATCTGTATCCATGCTCTAAATCAGAGACGTTCAAGGTGATGGTTGATTATGGCAAAACCTACCTATTGAGACTAATCAACTCCGGTCTGCAAGAGATTCTGTTTTTCGCCATCGCCAATCACAAAGTCACAGTCGTAGGAACAGATGCTAGCTACACCAAGCCTTTCACAACGGATTATGTCACCATCTCACCTGGTCAAACCATTGACCTTTTGCTCCATGCTAATCAGAGGCCTAACCATTACTACATGGCCGCTACAGCCTACTTAGGTGGCGCTGTTCCTTATGATAACACCACCACCACAGCCCTACTACAATACAAGAATCGGGGTTACACCCCTTCTTCAACCCCTTTCTTTCCTAATCTTCCTGCTCATAATGACACTACTGCATCAGTTCATTTTAGTGGTAGTCTCAGGAGCTTGGCTGATAAAAACCATCCCATTGACGTTCCACTAAAAATTACAACTCCCTTGTTTTATACCGTCTCCGTCAACACGTTCCAGTGCCCCAATAATTCATGTGCGGGGCCTAACGGGACTCGTCTGGCCGCTAGTGTAAACAACATTAGCTTTGTGAACCCTAGCATTGACATACTACAAGCTTACTATTACCATGTCAACGGGGTATTTGGAACTCGGTTTCCAGATTTCCCGCCTTTGCTGTTTAACTTTACAGCGCAGTACTTGCCGCTGTACCTTCAGACCCCAAAACGAGGGACAGAGGTGCAGGTACTGGAGTACAACGCGACAGTGGAGCTTGTGTTTCAGGGGACTAATTTGGTGGCAGGGGATGACCATCCAATGCATCTTCATGGTTACAGTTTCTATGTGGTTGGATTGGGGCTTGGGAACTTTGACAAGGATAAGGACCCTTTGAAATACAATCTTGTTGATCCTCCTCTTCAAAACACCATTGCTGTCCCTGTAAATGGGTGGACTACCATCAGATTCAAGGCTGACAATCCTGGAGTTTGGTTTATGCATTGCCATCTGGATAGGCATATGTCATGGGGCATGGATACGACATTTATAGTAAAAAACGGAAAGGGACCTAAAGCTCAAATCTTACCTCCACCACCACATATGCCACCTTGCTGA

Protein Analysis

569

Amino Acids

63.67

Weight (kDa)

8.76

Isoelectric Point (pI)

33.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 37 - 151 3.4e-40 Multicopper oxidase
Cu-oxidase PF00394 164 - 312 5.3e-40 Multicopper oxidase
Cu-oxidase_2 PF07731 421 - 552 7.8e-41 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000359)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48100
fragaria_vesca FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 273
Acc36I ACCTGC 1 cut(s) 1330
AccB1I GGYRCC 1 cut(s) 377
AccII CGCG 1 cut(s) 1358
AciI CCGC 5 cut(s) 864, 1136, 1161, 1265, 1301
AclWI GGATC 2 cut(s) 417, 1499
AcoI YGGCCR 4 cut(s) 86, 166, 861, 1158
AcsI RAATTY 1 cut(s) 489
AcuI CTGAAG 1 cut(s) 1295
AfaI GTAC 4 cut(s) 1295, 1307, 1344, 1352
AfiI CCNNNNNNNGG 4 cut(s) 175, 387, 1325, 1541
AflIII ACRYGT 1 cut(s) 1107
AgsI TTSAA 7 cut(s) 329, 554, 643, 957, 1489, 1517, 1564
AjnI CCWGG 3 cut(s) 604, 802, 1576
AleI CACNNNNGTG 1 cut(s) 104
AloI GAACNNNNNNTCC 2 cut(s) 1237, 1269
AluBI AGCT 8 cut(s) 83, 92, 762, 1032, 1182, 1214, 1369, 1670
AluI AGCT 8 cut(s) 83, 92, 762, 1032, 1182, 1214, 1369, 1670
Alw26I GTCTC 4 cut(s) 629, 673, 1028, 1102
AlwI GGATC 2 cut(s) 417, 1499
AlwNI CAGNNNCTG 1 cut(s) 1345
AoxI GGCC 6 cut(s) 86, 166, 842, 861, 1139, 1158
ApeKI GCWGC 1 cut(s) 138
ApoI RAATTY 1 cut(s) 489
ArsI GACNNNNNNTTYG 2 cut(s) 726, 758
AspLEI GCGC 3 cut(s) 274, 887, 1291
AspS9I GGNCC 6 cut(s) 179, 299, 428, 1139, 1480, 1661
AsuC2I CCSGG 2 cut(s) 177, 333
AsuHPI GGTGA 4 cut(s) 337, 658, 784, 792
AsuNHI GCTAGC 1 cut(s) 758
AvaII GGWCC 5 cut(s) 179, 299, 428, 1480, 1661
BaeGI GKGCMC 1 cut(s) 1121
BaeI ACNNNNGTAYC 2 cut(s) 1334, 1367
BalI TGGCCA 2 cut(s) 88, 168
BanI GGYRCC 1 cut(s) 377
BarI GAAGNNNNNNTAC 2 cut(s) 446, 478
BbvI GCAGC 1 cut(s) 150
BccI CCATC 8 cut(s) 440, 643, 728, 803, 1056, 1416, 1562, 1608
BciT130I CCWGG 3 cut(s) 606, 804, 1578
BciVI GTATCC 2 cut(s) 627, 1624
BcnI CCSGG 2 cut(s) 177, 333
BcoDI GTCTC 4 cut(s) 629, 673, 1028, 1102
BfaI CTAG 3 cut(s) 759, 1164, 1194
BfmI CTRYAG 2 cut(s) 136, 867
BfoI RGCGCY 1 cut(s) 888
BfuAI ACCTGC 1 cut(s) 1330
BfuI GTATCC 2 cut(s) 627, 1624
BisI GCNGC 4 cut(s) 139, 864, 1161, 1301
BlsI GCNGC 4 cut(s) 140, 865, 1162, 1302
BmcAI AGTACT 1 cut(s) 1295
Bme1390I CCNGG 5 cut(s) 177, 333, 606, 804, 1578
Bme18I GGWCC 5 cut(s) 179, 299, 428, 1480, 1661
BmgT120I GGNCC 6 cut(s) 179, 299, 428, 1139, 1480, 1661
BmiI GGNNCC 9 cut(s) 180, 337, 379, 430, 533, 567, 1140, 1482, 1662
BmrFI CCNGG 5 cut(s) 177, 333, 606, 804, 1578
BmsI GCATC 4 cut(s) 34, 745, 1010, 1426
BmtI GCTAGC 1 cut(s) 762
BpmI CTGGAG 2 cut(s) 1367, 1599
BpuMI CCSGG 2 cut(s) 177, 333
BsaBI GATNNNNATC 2 cut(s) 615, 1407
BsaJI CCNNGG 2 cut(s) 287, 424
BsaWI WCCGGW 1 cut(s) 692
BsaXI ACNNNNNCTCC 2 cut(s) 1358, 1388
Bsc4I CCNNNNNNNGG 4 cut(s) 175, 387, 1325, 1541
Bse1I ACTGG 4 cut(s) 169, 263, 1114, 1350
Bse3DI GCAATG 3 cut(s) 73, 1524, 1594
Bse8I GATNNNNATC 2 cut(s) 615, 1407
BseBI CCWGG 3 cut(s) 606, 804, 1578
BseDI CCNNGG 2 cut(s) 287, 424
BseGI GGATG 3 cut(s) 1048, 1408, 1408
BseJI GATNNNNATC 2 cut(s) 615, 1407
BseLI CCNNNNNNNGG 4 cut(s) 175, 387, 1325, 1541
BseMI GCAATG 3 cut(s) 73, 1524, 1594
BseMII CTCAG 1 cut(s) 1039
BseNI ACTGG 4 cut(s) 169, 263, 1114, 1350
BseRI GAGGAG 2 cut(s) 59, 1500
BseSI GKGCMC 1 cut(s) 1121
BseXI GCAGC 1 cut(s) 150
BsgI GTGCAG 1 cut(s) 1358
Bsh1236I CGCG 1 cut(s) 1358
BshFI GGCC 6 cut(s) 88, 168, 844, 863, 1141, 1160
BshNI GGYRCC 1 cut(s) 377
BsiSI CCGG 4 cut(s) 176, 332, 558, 693
BslFI GGGAC 7 cut(s) 192, 414, 1162, 1342, 1396, 1517, 1674
BslI CCNNNNNNNGG 4 cut(s) 175, 387, 1325, 1541
BsmAI GTCTC 4 cut(s) 629, 673, 1028, 1102
BsmBI CGTCTC 2 cut(s) 629, 1102
BsmFI GGGAC 7 cut(s) 192, 414, 1162, 1342, 1396, 1517, 1674
BsnI GGCC 6 cut(s) 88, 168, 844, 863, 1141, 1160
Bsp1286I GDGCHC 1 cut(s) 1121
Bsp143I GATC 4 cut(s) 354, 409, 610, 1504
Bsp19I CCATGG 1 cut(s) 287
BspACI CCGC 5 cut(s) 864, 1136, 1161, 1265, 1301
BspANI GGCC 6 cut(s) 88, 168, 844, 863, 1141, 1160
BspCNI CTCAG 1 cut(s) 1038
BspFNI CGCG 1 cut(s) 1358
BspLI GGNNCC 9 cut(s) 180, 337, 379, 430, 533, 567, 1140, 1482, 1662
BspMAI CTGCAG 1 cut(s) 140
BspMI ACCTGC 1 cut(s) 1330
BspOI GCTAGC 1 cut(s) 762
BspPI GGATC 2 cut(s) 417, 1499
BspT107I GGYRCC 1 cut(s) 377
BsrDI GCAATG 3 cut(s) 73, 1524, 1594
BsrI ACTGG 4 cut(s) 169, 263, 1114, 1350
BssECI CCNNGG 2 cut(s) 287, 424
BssMI GATC 4 cut(s) 354, 409, 610, 1504
BssT1I CCWWGG 1 cut(s) 287
Bst2UI CCWGG 3 cut(s) 606, 804, 1578
Bst4CI ACNGT 8 cut(s) 160, 401, 421, 428, 742, 1096, 1363, 1433
Bst6I CTCTTC 2 cut(s) 555, 1518
BstAPI GCANNNNNTGC 1 cut(s) 1297
BstC8I GCNNGC 5 cut(s) 23, 90, 393, 476, 760
BstDEI CTNAG 2 cut(s) 877, 1025
BstDSI CCRYGG 2 cut(s) 287, 424
BstF5I GGATG 3 cut(s) 1048, 1408, 1408
BstFNI CGCG 1 cut(s) 1358
BstH2I RGCGCY 1 cut(s) 888
BstHHI GCGC 3 cut(s) 274, 887, 1291
BstKTI GATC 4 cut(s) 357, 412, 613, 1507
BstMAI GTCTC 4 cut(s) 629, 673, 1028, 1102
BstMBI GATC 4 cut(s) 354, 409, 610, 1504
BstMWI GCNNNNNNNGC 3 cut(s) 89, 869, 1297
BstNI CCWGG 3 cut(s) 606, 804, 1578
BstNSI RCATGY 2 cut(s) 194, 395
BstSCI CCNGG 5 cut(s) 175, 331, 604, 802, 1576
BstSFI CTRYAG 2 cut(s) 136, 867
BstSLI GKGCMC 1 cut(s) 1121
BstUI CGCG 1 cut(s) 1358
BstV1I GCAGC 1 cut(s) 150
BsuI GTATCC 2 cut(s) 627, 1624
BsuRI GGCC 6 cut(s) 88, 168, 844, 863, 1141, 1160
BtgI CCRYGG 2 cut(s) 287, 424
BtgZI GCGATG 1 cut(s) 706
BtsCI GGATG 3 cut(s) 1048, 1408, 1408
BtsIMutI CAGTG 5 cut(s) 256, 406, 417, 1121, 1368
BveI ACCTGC 1 cut(s) 1330
Cac8I GCNNGC 5 cut(s) 23, 90, 393, 476, 760
CaiI CAGNNNCTG 1 cut(s) 1345
CfoI GCGC 3 cut(s) 274, 887, 1291
Cfr13I GGNCC 6 cut(s) 179, 299, 428, 1139, 1480, 1661
CseI GACGC 1 cut(s) 590
CsiI ACCWGGT 1 cut(s) 802
Csp6I GTAC 4 cut(s) 1294, 1306, 1343, 1351
CviQI GTAC 4 cut(s) 1294, 1306, 1343, 1351
DdeI CTNAG 2 cut(s) 877, 1025
DpnI GATC 4 cut(s) 356, 411, 612, 1506
DpnII GATC 4 cut(s) 354, 409, 610, 1504
EaeI YGGCCR 4 cut(s) 86, 166, 861, 1158
Eam1104I CTCTTC 2 cut(s) 555, 1518
EarI CTCTTC 2 cut(s) 555, 1518
Eco130I CCWWGG 1 cut(s) 287
Eco147I AGGCCT 1 cut(s) 844
Eco47I GGWCC 5 cut(s) 179, 299, 428, 1480, 1661
Eco57I CTGAAG 1 cut(s) 1295
EcoO109I RGGNCCY 3 cut(s) 1139, 1480, 1661
EcoRII CCWGG 3 cut(s) 604, 802, 1576
EcoT14I CCWWGG 1 cut(s) 287
EcoT22I ATGCAT 2 cut(s) 1419, 1596
ErhI CCWWGG 1 cut(s) 287
Esp3I CGTCTC 2 cut(s) 629, 1102
FalI AAGNNNNNCTT 4 cut(s) 137, 169, 366, 398
FaqI GGGAC 7 cut(s) 192, 414, 1162, 1342, 1396, 1517, 1674
FauI CCCGC 2 cut(s) 1129, 1272
FauNDI CATATG 2 cut(s) 1614, 1695
Fnu4HI GCNGC 4 cut(s) 139, 864, 1161, 1301
FokI GGATG 3 cut(s) 1035, 1395, 1415
Fsp4HI GCNGC 4 cut(s) 139, 864, 1161, 1301
FspBI CTAG 3 cut(s) 759, 1164, 1194
FspI TGCGCA 1 cut(s) 273
GlaI GCGC 3 cut(s) 273, 886, 1290
GluI GCNGC 4 cut(s) 139, 864, 1161, 1301
GsuI CTGGAG 2 cut(s) 1367, 1599
HaeII RGCGCY 1 cut(s) 888
HaeIII GGCC 6 cut(s) 88, 168, 844, 863, 1141, 1160
HapII CCGG 4 cut(s) 176, 332, 558, 693
HgaI GACGC 1 cut(s) 590
HhaI GCGC 3 cut(s) 274, 887, 1291
Hin6I GCGC 3 cut(s) 272, 885, 1289
HinP1I GCGC 3 cut(s) 272, 885, 1289
HincII GTYRAC 3 cut(s) 602, 1105, 1231
HindII GTYRAC 3 cut(s) 602, 1105, 1231
HindIII AAGCTT 2 cut(s) 81, 1212
HinfI GANTC 5 cut(s) 132, 706, 934, 1150, 1560
HpaII CCGG 4 cut(s) 176, 332, 558, 693
HphI GGTGA 4 cut(s) 337, 658, 784, 792
Hpy166II GTNNAC 8 cut(s) 345, 424, 602, 1105, 1171, 1189, 1231, 1548
Hpy188I TCNGA 6 cut(s) 295, 580, 634, 840, 1314, 1559
Hpy188III TCNNGA 5 cut(s) 12, 154, 1027, 1256, 1604
Hpy8I GTNNAC 8 cut(s) 345, 424, 602, 1105, 1171, 1189, 1231, 1548
Hpy99I CGWCG 1 cut(s) 584
HpyAV CCTTC 4 cut(s) 368, 511, 960, 1319
HpyCH4III ACNGT 8 cut(s) 160, 401, 421, 428, 742, 1096, 1363, 1433
HpyCH4IV ACGT 3 cut(s) 638, 1059, 1109
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 869, 1297
HpyF3I CTNAG 2 cut(s) 877, 1025
HpySE526I ACGT 3 cut(s) 638, 1059, 1109
HspAI GCGC 3 cut(s) 272, 885, 1289
Kzo9I GATC 4 cut(s) 354, 409, 610, 1504
LmnI GCTCC 4 cut(s) 335, 831, 1029, 1366
Lsp1109I GCAGC 1 cut(s) 150
LweI GCATC 4 cut(s) 34, 745, 1010, 1426
MabI ACCWGGT 1 cut(s) 802
MaeI CTAG 3 cut(s) 759, 1164, 1194
MaeII ACGT 3 cut(s) 638, 1059, 1109
MaeIII GTNAC 6 cut(s) 95, 242, 736, 790, 941, 1427
MalI GATC 4 cut(s) 356, 411, 612, 1506
MboI GATC 4 cut(s) 354, 409, 610, 1504
MboII GAAGA 7 cut(s) 466, 469, 542, 945, 968, 1412, 1505
MhlI GDGCHC 1 cut(s) 1121
MlsI TGGCCA 2 cut(s) 88, 168
MluCI AATT 7 cut(s) 15, 324, 460, 489, 1071, 1126, 1387
MluNI TGGCCA 2 cut(s) 88, 168
MlyI GAGTC 2 cut(s) 126, 1144
MmeI TCCRAC 3 cut(s) 273, 603, 1426
Mox20I TGGCCA 2 cut(s) 88, 168
Mph1103I ATGCAT 2 cut(s) 1419, 1596
MscI TGGCCA 2 cut(s) 88, 168
MseI TTAA 3 cut(s) 57, 228, 1278
MslI CAYNNNNRTG 4 cut(s) 104, 261, 1014, 1422
Msp20I TGGCCA 2 cut(s) 88, 168
MspA1I CMGCKG 1 cut(s) 1303
MspI CCGG 4 cut(s) 176, 332, 558, 693
MspR9I CCNGG 5 cut(s) 177, 333, 606, 804, 1578
MvaI CCWGG 3 cut(s) 606, 804, 1578
MvnI CGCG 1 cut(s) 1358
MwoI GCNNNNNNNGC 3 cut(s) 89, 869, 1297
NciI CCSGG 2 cut(s) 177, 333
NcoI CCATGG 1 cut(s) 287
NdeI CATATG 2 cut(s) 1614, 1695
NdeII GATC 4 cut(s) 354, 409, 610, 1504
NheI GCTAGC 1 cut(s) 758
NlaIV GGNNCC 9 cut(s) 180, 337, 379, 430, 533, 567, 1140, 1482, 1662
NmuCI GTSAC 2 cut(s) 736, 790
NsbI TGCGCA 1 cut(s) 273
NsiI ATGCAT 2 cut(s) 1419, 1596
NspI RCATGY 2 cut(s) 194, 395
OliI CACNNNNGTG 1 cut(s) 104
PaeI GCATGC 1 cut(s) 395
PceI AGGCCT 1 cut(s) 844
PfeI GAWTC 3 cut(s) 706, 934, 1560
PfoI TCCNGGA 2 cut(s) 175, 1576
PkrI GCNGC 4 cut(s) 140, 865, 1162, 1302
PleI GAGTC 2 cut(s) 126, 1144
PpsI GAGTC 2 cut(s) 126, 1144
PpuMI RGGWCCY 2 cut(s) 1480, 1661
Psp5II RGGWCCY 2 cut(s) 1480, 1661
Psp6I CCWGG 3 cut(s) 604, 802, 1576
PspGI CCWGG 3 cut(s) 604, 802, 1576
PspN4I GGNNCC 9 cut(s) 180, 337, 379, 430, 533, 567, 1140, 1482, 1662
PspPI GGNCC 6 cut(s) 179, 299, 428, 1139, 1480, 1661
PspPPI RGGWCCY 2 cut(s) 1480, 1661
PstI CTGCAG 1 cut(s) 140
PstNI CAGNNNCTG 1 cut(s) 1345
RsaI GTAC 4 cut(s) 1295, 1307, 1344, 1352
RsaNI GTAC 4 cut(s) 1294, 1306, 1343, 1351
RseI CAYNNNNRTG 4 cut(s) 104, 261, 1014, 1422
SaqAI TTAA 3 cut(s) 57, 228, 1278
SatI GCNGC 4 cut(s) 139, 864, 1161, 1301
Sau3AI GATC 4 cut(s) 354, 409, 610, 1504
Sau96I GGNCC 6 cut(s) 179, 299, 428, 1139, 1480, 1661
ScaI AGTACT 1 cut(s) 1295
SchI GAGTC 2 cut(s) 126, 1144
ScrFI CCNGG 5 cut(s) 177, 333, 606, 804, 1578
SduI GDGCHC 1 cut(s) 1121
SexAI ACCWGGT 1 cut(s) 802
SfaNI GCATC 4 cut(s) 34, 745, 1010, 1426
SfcI CTRYAG 2 cut(s) 136, 867
SinI GGWCC 5 cut(s) 179, 299, 428, 1480, 1661
SmiMI CAYNNNNRTG 4 cut(s) 104, 261, 1014, 1422
SphI GCATGC 1 cut(s) 395
Sse9I AATT 7 cut(s) 15, 324, 460, 489, 1071, 1126, 1387
SseBI AGGCCT 1 cut(s) 844
SsiI CCGC 5 cut(s) 864, 1136, 1161, 1265, 1301
SspMI CTAG 3 cut(s) 759, 1164, 1194
StuI AGGCCT 1 cut(s) 844
StyD4I CCNGG 5 cut(s) 175, 331, 604, 802, 1576
StyI CCWWGG 1 cut(s) 287
TaaI ACNGT 8 cut(s) 160, 401, 421, 428, 742, 1096, 1363, 1433
TaiI ACGT 3 cut(s) 641, 1062, 1112
TaqI TCGA 1 cut(s) 412
TaqII GACCGA 1 cut(s) 196
TasI AATT 7 cut(s) 15, 324, 460, 489, 1071, 1126, 1387
TatI WGTACW 2 cut(s) 1293, 1350
TauI GCSGC 3 cut(s) 866, 1163, 1303
TfiI GAWTC 3 cut(s) 706, 934, 1560
Tru1I TTAA 3 cut(s) 57, 228, 1278
Tru9I TTAA 3 cut(s) 57, 228, 1278
TscAI CASTG 5 cut(s) 263, 406, 424, 1121, 1368
TseFI GTSAC 2 cut(s) 736, 790
TseI GCWGC 1 cut(s) 138
Tsp45I GTSAC 2 cut(s) 736, 790
TspDTI ATGAA 5 cut(s) 17, 185, 998, 1119, 1412
TspGWI ACGGA 4 cut(s) 312, 797, 1090, 1668
TspRI CASTG 5 cut(s) 263, 406, 424, 1121, 1368
VpaK11BI GGWCC 5 cut(s) 179, 299, 428, 1480, 1661
XapI RAATTY 1 cut(s) 489
XceI RCATGY 2 cut(s) 194, 395
XcmI CCANNNNNNNNNTGG 1 cut(s) 285
XspI CTAG 3 cut(s) 759, 1164, 1194
ZrmI AGTACT 1 cut(s) 1295
Zsp2I ATGCAT 2 cut(s) 1419, 1596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.