Lignin degradation and detoxification of lignin-derived products
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 501 |
| Acc36I | ACCTGC | 1 cut(s) | 1555 |
| AccB1I | GGYRCC | 1 cut(s) | 605 |
| AccI | GTMKAC | 1 cut(s) | 1101 |
| AccII | CGCG | 2 cut(s) | 1378, 1583 |
| AciI | CCGC | 4 cut(s) | 1092, 1386, 1490, 1526 |
| AclWI | GGATC | 2 cut(s) | 645, 1724 |
| AcoI | YGGCCR | 2 cut(s) | 1089, 1383 |
| AcsI | RAATTY | 1 cut(s) | 717 |
| AcuI | CTGAAG | 2 cut(s) | 764, 1520 |
| AdeI | CACNNNGTG | 1 cut(s) | 546 |
| AfaI | GTAC | 4 cut(s) | 1520, 1532, 1569, 1577 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 615, 1550, 1766 |
| AflIII | ACRYGT | 2 cut(s) | 1332, 1376 |
| AgsI | TTSAA | 6 cut(s) | 557, 871, 1182, 1714, 1742, 1789 |
| AjnI | CCWGG | 4 cut(s) | 252, 832, 1030, 1801 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1462, 1494 |
| AluBI | AGCT | 7 cut(s) | 329, 990, 1257, 1407, 1439, 1594, 1895 |
| AluI | AGCT | 7 cut(s) | 329, 990, 1257, 1407, 1439, 1594, 1895 |
| Alw21I | GWGCWC | 1 cut(s) | 1596 |
| Alw26I | GTCTC | 5 cut(s) | 120, 426, 901, 1253, 1327 |
| AlwI | GGATC | 2 cut(s) | 645, 1724 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1570 |
| AoxI | GGCC | 5 cut(s) | 783, 1070, 1089, 1364, 1383 |
| ApoI | RAATTY | 1 cut(s) | 717 |
| AspLEI | GCGC | 3 cut(s) | 502, 1115, 1516 |
| AspS9I | GGNCC | 7 cut(s) | 407, 527, 656, 1118, 1364, 1705, 1886 |
| AsuC2I | CCSGG | 2 cut(s) | 405, 561 |
| AsuHPI | GGTGA | 4 cut(s) | 565, 886, 1012, 1020 |
| AsuNHI | GCTAGC | 1 cut(s) | 986 |
| AvaII | GGWCC | 6 cut(s) | 407, 527, 656, 1118, 1705, 1886 |
| BaeGI | GKGCMC | 2 cut(s) | 551, 1346 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1559, 1592 |
| BanI | GGYRCC | 1 cut(s) | 605 |
| BanII | GRGCYC | 1 cut(s) | 1596 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 674, 706, 1551, 1583 |
| BauI | CACGAG | 1 cut(s) | 1595 |
| Bbv12I | GWGCWC | 1 cut(s) | 1596 |
| BccI | CCATC | 8 cut(s) | 668, 871, 956, 1031, 1334, 1641, 1787, 1833 |
| BciT130I | CCWGG | 4 cut(s) | 254, 834, 1032, 1803 |
| BciVI | GTATCC | 2 cut(s) | 855, 1849 |
| BcnI | CCSGG | 2 cut(s) | 405, 561 |
| BcoDI | GTCTC | 5 cut(s) | 120, 426, 901, 1253, 1327 |
| BfaI | CTAG | 3 cut(s) | 987, 1389, 1419 |
| BfmI | CTRYAG | 1 cut(s) | 1095 |
| BfoI | RGCGCY | 1 cut(s) | 1116 |
| BfuAI | ACCTGC | 1 cut(s) | 1555 |
| BfuI | GTATCC | 2 cut(s) | 855, 1849 |
| BisI | GCNGC | 3 cut(s) | 1092, 1386, 1526 |
| BlsI | GCNGC | 3 cut(s) | 1093, 1387, 1527 |
| BmcAI | AGTACT | 1 cut(s) | 1520 |
| Bme1390I | CCNGG | 6 cut(s) | 254, 405, 561, 834, 1032, 1803 |
| Bme18I | GGWCC | 6 cut(s) | 407, 527, 656, 1118, 1705, 1886 |
| BmgT120I | GGNCC | 7 cut(s) | 407, 527, 656, 1118, 1364, 1705, 1886 |
| BmiI | GGNNCC | 9 cut(s) | 408, 565, 607, 658, 761, 795, 1415, 1707, 1887 |
| BmrFI | CCNGG | 6 cut(s) | 254, 405, 561, 834, 1032, 1803 |
| BmsI | GCATC | 3 cut(s) | 973, 1235, 1651 |
| BmtI | GCTAGC | 1 cut(s) | 990 |
| BpmI | CTGGAG | 2 cut(s) | 1592, 1824 |
| BpuMI | CCSGG | 2 cut(s) | 405, 561 |
| BsaBI | GATNNNNATC | 2 cut(s) | 843, 1632 |
| BsaJI | CCNNGG | 2 cut(s) | 515, 652 |
| BsaWI | WCCGGW | 1 cut(s) | 920 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1583, 1613 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 615, 1550, 1766 |
| Bse1I | ACTGG | 3 cut(s) | 491, 1339, 1575 |
| Bse3DI | GCAATG | 3 cut(s) | 315, 1749, 1819 |
| Bse8I | GATNNNNATC | 2 cut(s) | 843, 1632 |
| BseBI | CCWGG | 4 cut(s) | 254, 834, 1032, 1803 |
| BseDI | CCNNGG | 2 cut(s) | 515, 652 |
| BseGI | GGATG | 2 cut(s) | 1633, 1633 |
| BseJI | GATNNNNATC | 2 cut(s) | 843, 1632 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 615, 1550, 1766 |
| BseMI | GCAATG | 3 cut(s) | 315, 1749, 1819 |
| BseMII | CTCAG | 2 cut(s) | 896, 1264 |
| BseNI | ACTGG | 3 cut(s) | 491, 1339, 1575 |
| BseRI | GAGGAG | 7 cut(s) | 35, 129, 220, 223, 258, 261, 1725 |
| BseSI | GKGCMC | 2 cut(s) | 551, 1346 |
| BsgI | GTGCAG | 2 cut(s) | 349, 1583 |
| Bsh1236I | CGCG | 2 cut(s) | 1378, 1583 |
| BshFI | GGCC | 5 cut(s) | 785, 1072, 1091, 1366, 1385 |
| BshNI | GGYRCC | 1 cut(s) | 605 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1596 |
| BsiSI | CCGG | 4 cut(s) | 404, 560, 786, 921 |
| BslFI | GGGAC | 7 cut(s) | 420, 642, 991, 1567, 1621, 1742, 1899 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 615, 1550, 1766 |
| BsmAI | GTCTC | 5 cut(s) | 120, 426, 901, 1253, 1327 |
| BsmBI | CGTCTC | 1 cut(s) | 1327 |
| BsmFI | GGGAC | 7 cut(s) | 420, 642, 991, 1567, 1621, 1742, 1899 |
| BsnI | GGCC | 5 cut(s) | 785, 1072, 1091, 1366, 1385 |
| Bsp1286I | GDGCHC | 3 cut(s) | 551, 1346, 1596 |
| Bsp143I | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| Bsp19I | CCATGG | 1 cut(s) | 515 |
| BspACI | CCGC | 4 cut(s) | 1092, 1386, 1490, 1526 |
| BspANI | GGCC | 5 cut(s) | 785, 1072, 1091, 1366, 1385 |
| BspCNI | CTCAG | 2 cut(s) | 897, 1263 |
| BspFNI | CGCG | 2 cut(s) | 1378, 1583 |
| BspLI | GGNNCC | 9 cut(s) | 408, 565, 607, 658, 761, 795, 1415, 1707, 1887 |
| BspMI | ACCTGC | 1 cut(s) | 1555 |
| BspOI | GCTAGC | 1 cut(s) | 990 |
| BspPI | GGATC | 2 cut(s) | 645, 1724 |
| BspT107I | GGYRCC | 1 cut(s) | 605 |
| BsrDI | GCAATG | 3 cut(s) | 315, 1749, 1819 |
| BsrI | ACTGG | 3 cut(s) | 491, 1339, 1575 |
| BssECI | CCNNGG | 2 cut(s) | 515, 652 |
| BssMI | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| BssSI | CACGAG | 1 cut(s) | 1595 |
| BssT1I | CCWWGG | 1 cut(s) | 515 |
| Bst2BI | CACGAG | 1 cut(s) | 1595 |
| Bst2UI | CCWGG | 4 cut(s) | 254, 834, 1032, 1803 |
| Bst6I | CTCTTC | 3 cut(s) | 123, 783, 1743 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1522 |
| BstC8I | GCNNGC | 2 cut(s) | 621, 988 |
| BstDEI | CTNAG | 2 cut(s) | 905, 1250 |
| BstDSI | CCRYGG | 2 cut(s) | 515, 652 |
| BstF5I | GGATG | 2 cut(s) | 1633, 1633 |
| BstFNI | CGCG | 2 cut(s) | 1378, 1583 |
| BstH2I | RGCGCY | 1 cut(s) | 1116 |
| BstHHI | GCGC | 3 cut(s) | 502, 1115, 1516 |
| BstKTI | GATC | 5 cut(s) | 585, 640, 841, 1201, 1732 |
| BstMAI | GTCTC | 5 cut(s) | 120, 426, 901, 1253, 1327 |
| BstMBI | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 326, 1522 |
| BstNI | CCWGG | 4 cut(s) | 254, 834, 1032, 1803 |
| BstNSI | RCATGY | 1 cut(s) | 623 |
| BstSCI | CCNGG | 6 cut(s) | 252, 403, 559, 832, 1030, 1801 |
| BstSFI | CTRYAG | 1 cut(s) | 1095 |
| BstSLI | GKGCMC | 2 cut(s) | 551, 1346 |
| BstUI | CGCG | 2 cut(s) | 1378, 1583 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 491 |
| BsuI | GTATCC | 2 cut(s) | 855, 1849 |
| BsuRI | GGCC | 5 cut(s) | 785, 1072, 1091, 1366, 1385 |
| BtgI | CCRYGG | 2 cut(s) | 515, 652 |
| BtgZI | GCGATG | 1 cut(s) | 934 |
| BtsCI | GGATG | 2 cut(s) | 1633, 1633 |
| BtsIMutI | CAGTG | 5 cut(s) | 484, 551, 634, 645, 1346 |
| BveI | ACCTGC | 1 cut(s) | 1555 |
| Cac8I | GCNNGC | 2 cut(s) | 621, 988 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1570 |
| CfoI | GCGC | 3 cut(s) | 502, 1115, 1516 |
| Cfr13I | GGNCC | 7 cut(s) | 407, 527, 656, 1118, 1364, 1705, 1886 |
| CseI | GACGC | 2 cut(s) | 818, 1367 |
| CsiI | ACCWGGT | 1 cut(s) | 1030 |
| Csp6I | GTAC | 4 cut(s) | 1519, 1531, 1568, 1576 |
| CviQI | GTAC | 4 cut(s) | 1519, 1531, 1568, 1576 |
| DdeI | CTNAG | 2 cut(s) | 905, 1250 |
| DpnI | GATC | 5 cut(s) | 584, 639, 840, 1200, 1731 |
| DpnII | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| DraIII | CACNNNGTG | 1 cut(s) | 546 |
| EaeI | YGGCCR | 2 cut(s) | 1089, 1383 |
| Eam1104I | CTCTTC | 3 cut(s) | 123, 783, 1743 |
| EarI | CTCTTC | 3 cut(s) | 123, 783, 1743 |
| Ecl136II | GAGCTC | 1 cut(s) | 1594 |
| Eco130I | CCWWGG | 1 cut(s) | 515 |
| Eco147I | AGGCCT | 1 cut(s) | 1072 |
| Eco24I | GRGCYC | 1 cut(s) | 1596 |
| Eco32I | GATATC | 5 cut(s) | 38, 57, 132, 283, 512 |
| Eco47I | GGWCC | 6 cut(s) | 407, 527, 656, 1118, 1705, 1886 |
| Eco53kI | GAGCTC | 1 cut(s) | 1594 |
| Eco57I | CTGAAG | 2 cut(s) | 764, 1520 |
| EcoICRI | GAGCTC | 1 cut(s) | 1594 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1705, 1886 |
| EcoRII | CCWGG | 4 cut(s) | 252, 832, 1030, 1801 |
| EcoRV | GATATC | 5 cut(s) | 38, 57, 132, 283, 512 |
| EcoT14I | CCWWGG | 1 cut(s) | 515 |
| EcoT22I | ATGCAT | 3 cut(s) | 1228, 1644, 1821 |
| EcoT38I | GRGCYC | 1 cut(s) | 1596 |
| ErhI | CCWWGG | 1 cut(s) | 515 |
| Esp3I | CGTCTC | 1 cut(s) | 1327 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 365, 397, 594, 626 |
| FaqI | GGGAC | 7 cut(s) | 420, 642, 991, 1567, 1621, 1742, 1899 |
| FauI | CCCGC | 1 cut(s) | 1497 |
| FauNDI | CATATG | 1 cut(s) | 1839 |
| FblI | GTMKAC | 1 cut(s) | 1101 |
| Fnu4HI | GCNGC | 3 cut(s) | 1092, 1386, 1526 |
| FokI | GGATG | 2 cut(s) | 1620, 1640 |
| FriOI | GRGCYC | 1 cut(s) | 1596 |
| Fsp4HI | GCNGC | 3 cut(s) | 1092, 1386, 1526 |
| FspBI | CTAG | 3 cut(s) | 987, 1389, 1419 |
| FspI | TGCGCA | 1 cut(s) | 501 |
| GlaI | GCGC | 3 cut(s) | 501, 1114, 1515 |
| GluI | GCNGC | 3 cut(s) | 1092, 1386, 1526 |
| GsuI | CTGGAG | 2 cut(s) | 1592, 1824 |
| HaeII | RGCGCY | 1 cut(s) | 1116 |
| HaeIII | GGCC | 5 cut(s) | 785, 1072, 1091, 1366, 1385 |
| HapII | CCGG | 4 cut(s) | 404, 560, 786, 921 |
| HgaI | GACGC | 2 cut(s) | 818, 1367 |
| HhaI | GCGC | 3 cut(s) | 502, 1115, 1516 |
| Hin6I | GCGC | 3 cut(s) | 500, 1113, 1514 |
| HinP1I | GCGC | 3 cut(s) | 500, 1113, 1514 |
| HincII | GTYRAC | 2 cut(s) | 830, 1456 |
| HindII | GTYRAC | 2 cut(s) | 830, 1456 |
| HindIII | AAGCTT | 1 cut(s) | 1437 |
| HinfI | GANTC | 4 cut(s) | 360, 934, 1785, 1806 |
| HpaII | CCGG | 4 cut(s) | 404, 560, 786, 921 |
| HphI | GGTGA | 4 cut(s) | 565, 886, 1012, 1020 |
| Hpy166II | GTNNAC | 8 cut(s) | 424, 573, 652, 830, 1102, 1396, 1456, 1773 |
| Hpy188I | TCNGA | 7 cut(s) | 523, 734, 808, 862, 1068, 1539, 1784 |
| Hpy8I | GTNNAC | 8 cut(s) | 424, 573, 652, 830, 1102, 1396, 1456, 1773 |
| Hpy99I | CGWCG | 3 cut(s) | 203, 449, 812 |
| HpyAV | CCTTC | 7 cut(s) | 91, 222, 589, 596, 739, 1185, 1544 |
| HpyCH4IV | ACGT | 2 cut(s) | 1284, 1334 |
| HpyCH4V | TGCA | 8 cut(s) | 320, 366, 713, 928, 1226, 1564, 1642, 1819 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 326, 1522 |
| HpyF3I | CTNAG | 2 cut(s) | 905, 1250 |
| HpySE526I | ACGT | 2 cut(s) | 1284, 1334 |
| HspAI | GCGC | 3 cut(s) | 500, 1113, 1514 |
| Kzo9I | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| LmnI | GCTCC | 6 cut(s) | 48, 255, 563, 1059, 1254, 1591 |
| LweI | GCATC | 3 cut(s) | 973, 1235, 1651 |
| MabI | ACCWGGT | 1 cut(s) | 1030 |
| MaeI | CTAG | 3 cut(s) | 987, 1389, 1419 |
| MaeII | ACGT | 2 cut(s) | 1284, 1334 |
| MaeIII | GTNAC | 5 cut(s) | 470, 964, 1018, 1166, 1652 |
| MalI | GATC | 5 cut(s) | 584, 639, 840, 1200, 1731 |
| MboI | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| MfeI | CAATTG | 1 cut(s) | 302 |
| MhlI | GDGCHC | 3 cut(s) | 551, 1346, 1596 |
| MluCI | AATT | 8 cut(s) | 302, 552, 688, 717, 916, 1296, 1351, 1612 |
| MluI | ACGCGT | 1 cut(s) | 1376 |
| MlyI | GAGTC | 2 cut(s) | 354, 1815 |
| MmeI | TCCRAC | 3 cut(s) | 501, 831, 1651 |
| Mph1103I | ATGCAT | 3 cut(s) | 1228, 1644, 1821 |
| MseI | TTAA | 2 cut(s) | 456, 1503 |
| MslI | CAYNNNNRTG | 3 cut(s) | 489, 1239, 1647 |
| MspA1I | CMGCKG | 1 cut(s) | 1528 |
| MspI | CCGG | 4 cut(s) | 404, 560, 786, 921 |
| MspR9I | CCNGG | 6 cut(s) | 254, 405, 561, 834, 1032, 1803 |
| MunI | CAATTG | 1 cut(s) | 302 |
| MvaI | CCWGG | 4 cut(s) | 254, 834, 1032, 1803 |
| MvnI | CGCG | 2 cut(s) | 1378, 1583 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 326, 1522 |
| NciI | CCSGG | 2 cut(s) | 405, 561 |
| NcoI | CCATGG | 1 cut(s) | 515 |
| NdeI | CATATG | 1 cut(s) | 1839 |
| NdeII | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| NheI | GCTAGC | 1 cut(s) | 986 |
| NlaIV | GGNNCC | 9 cut(s) | 408, 565, 607, 658, 761, 795, 1415, 1707, 1887 |
| NmuCI | GTSAC | 1 cut(s) | 1018 |
| NsbI | TGCGCA | 1 cut(s) | 501 |
| NsiI | ATGCAT | 3 cut(s) | 1228, 1644, 1821 |
| NspI | RCATGY | 1 cut(s) | 623 |
| PaeI | GCATGC | 1 cut(s) | 623 |
| PceI | AGGCCT | 1 cut(s) | 1072 |
| PfeI | GAWTC | 2 cut(s) | 934, 1785 |
| PfoI | TCCNGGA | 3 cut(s) | 252, 403, 1801 |
| PkrI | GCNGC | 3 cut(s) | 1093, 1387, 1527 |
| PleI | GAGTC | 2 cut(s) | 354, 1814 |
| PpsI | GAGTC | 2 cut(s) | 354, 1814 |
| PpuMI | RGGWCCY | 2 cut(s) | 1705, 1886 |
| Psp124BI | GAGCTC | 1 cut(s) | 1596 |
| Psp5II | RGGWCCY | 2 cut(s) | 1705, 1886 |
| Psp6I | CCWGG | 4 cut(s) | 252, 832, 1030, 1801 |
| PspGI | CCWGG | 4 cut(s) | 252, 832, 1030, 1801 |
| PspN4I | GGNNCC | 9 cut(s) | 408, 565, 607, 658, 761, 795, 1415, 1707, 1887 |
| PspPI | GGNCC | 7 cut(s) | 407, 527, 656, 1118, 1364, 1705, 1886 |
| PspPPI | RGGWCCY | 2 cut(s) | 1705, 1886 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1570 |
| RsaI | GTAC | 4 cut(s) | 1520, 1532, 1569, 1577 |
| RsaNI | GTAC | 4 cut(s) | 1519, 1531, 1568, 1576 |
| RseI | CAYNNNNRTG | 3 cut(s) | 489, 1239, 1647 |
| SacI | GAGCTC | 1 cut(s) | 1596 |
| SaqAI | TTAA | 2 cut(s) | 456, 1503 |
| SatI | GCNGC | 3 cut(s) | 1092, 1386, 1526 |
| Sau3AI | GATC | 5 cut(s) | 582, 637, 838, 1198, 1729 |
| Sau96I | GGNCC | 7 cut(s) | 407, 527, 656, 1118, 1364, 1705, 1886 |
| ScaI | AGTACT | 1 cut(s) | 1520 |
| SchI | GAGTC | 2 cut(s) | 354, 1815 |
| ScrFI | CCNGG | 6 cut(s) | 254, 405, 561, 834, 1032, 1803 |
| SduI | GDGCHC | 3 cut(s) | 551, 1346, 1596 |
| SexAI | ACCWGGT | 1 cut(s) | 1030 |
| SfaNI | GCATC | 3 cut(s) | 973, 1235, 1651 |
| SfcI | CTRYAG | 1 cut(s) | 1095 |
| SinI | GGWCC | 6 cut(s) | 407, 527, 656, 1118, 1705, 1886 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 489, 1239, 1647 |
| SphI | GCATGC | 1 cut(s) | 623 |
| Sse9I | AATT | 8 cut(s) | 302, 552, 688, 717, 916, 1296, 1351, 1612 |
| SseBI | AGGCCT | 1 cut(s) | 1072 |
| SsiI | CCGC | 4 cut(s) | 1092, 1386, 1490, 1526 |
| SspI | AATATT | 1 cut(s) | 11 |
| SspMI | CTAG | 3 cut(s) | 987, 1389, 1419 |
| SstI | GAGCTC | 1 cut(s) | 1596 |
| StuI | AGGCCT | 1 cut(s) | 1072 |
| StyD4I | CCNGG | 6 cut(s) | 252, 403, 559, 832, 1030, 1801 |
| StyI | CCWWGG | 1 cut(s) | 515 |
| TaiI | ACGT | 2 cut(s) | 1287, 1337 |
| TaqI | TCGA | 9 cut(s) | 21, 29, 48, 142, 161, 198, 447, 593, 640 |
| TaqII | GACCGA | 1 cut(s) | 424 |
| TasI | AATT | 8 cut(s) | 302, 552, 688, 717, 916, 1296, 1351, 1612 |
| TatI | WGTACW | 2 cut(s) | 1518, 1575 |
| TauI | GCSGC | 3 cut(s) | 1094, 1388, 1528 |
| TfiI | GAWTC | 2 cut(s) | 934, 1785 |
| Tru1I | TTAA | 2 cut(s) | 456, 1503 |
| Tru9I | TTAA | 2 cut(s) | 456, 1503 |
| TscAI | CASTG | 5 cut(s) | 491, 551, 634, 652, 1346 |
| TseFI | GTSAC | 1 cut(s) | 1018 |
| Tsp45I | GTSAC | 1 cut(s) | 1018 |
| TspDTI | ATGAA | 6 cut(s) | 7, 304, 1223, 1344, 1637, 1855 |
| TspGWI | ACGGA | 2 cut(s) | 540, 1119 |
| TspRI | CASTG | 5 cut(s) | 491, 551, 634, 652, 1346 |
| VpaK11BI | GGWCC | 6 cut(s) | 407, 527, 656, 1118, 1705, 1886 |
| XapI | RAATTY | 1 cut(s) | 717 |
| XceI | RCATGY | 1 cut(s) | 623 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 513 |
| XmiI | GTMKAC | 1 cut(s) | 1101 |
| XspI | CTAG | 3 cut(s) | 987, 1389, 1419 |
| ZrmI | AGTACT | 1 cut(s) | 1520 |
| Zsp2I | ATGCAT | 3 cut(s) | 1228, 1644, 1821 |