Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Forward (+)

30560601 .. 30592447

Gene Structure 31847 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023967

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGTGGTCTAAGAAGTGGAAATCAGCACTTCAGGCTTTATCATTTCTACTTGTACTCTTCCTTCATCGTCAAGCTTCAGCCGATTATAATTGGGTCGTGAAAGAATCTACATATACAAGGCTGTGCAGCACTAAGTCAATATTGACAGTTAATGGAAAATTTCCGGGACCAGTTTTAAGAGCTTATAAAGGAGATACAGTCTATGTCAATGTTCATAACAGAGGCAGATACAATATCACTATTCACTGGCATGGAGTCAAGCAACCGAGGAATCCATGGTCTGATGGTCCTGAATACATCACACAATGTGGTATTCAACCGGGTGGGAGTTTCAGGCAGAAGATCATATTTTCTATTGAGGAAGGAACCCTTTGGTGGCACGCTCATAGTGATTGGTCCCGGGCGACGGTTCATGGAGCAATTTTTGTCTATCCAAAACCAGGAACTAGCTACCCTTTTCCCAAGCCCTATGCTGAAGTTCCCATAATATTAGGTGAGTGGTGGAAAAGTGATGTAATGGAGGTACTTGATGAATTTGTTAGAACCGGAGGAACTCCCAATGTTTCTGATGCTTACACCATCAATGGTCAACCAGGAGACCTCTATCCTTGCTCAAAATCAGAAACATTCAAACTCTCTGTGGACCAAAACAAGACCCATCTGCTCCGAATAATCAACGCTGCCATGAACAGCATCCTTTTCTTCTCAGTCGCAAACCATAACCTGACGGTGGTCGCAGCAGACGCAGCCTACACCGCGCCAATCTCAACATCCTACATCACAATATCTCCTGGACAAACCATTGATGCCCTGTTGTTCACAGACCAACAACCTGGTCGTTATTACATGGCTGCTAGGGCTTACCAAGGTAACCTAGCTATTGGTTTTGACAACACCACAACCACATCAATAGTTGAATACAAAGATGGCAACGGAAATGGTAAAACTGCTCCATTATCAATATTTGAATACAAAGATGGCAGTGGAAATGGTAAAACTGCTCCATTATTTCCCTACCTTCCTTACTATAACAACACGAATGCAGCCTTTGGCTTTTTCAATAGCCTTAAAAGCCTAGCCATTGCCGATGTCGTAAAAACCACCACCACTCGAATTGTTTCAACAGTATCGGTGAACACACTCCCTTGCCTTGGAAATCAAACCTGTGAAGGACCCAATGGGACTCGATTAGCTGCCAGTATGAACAACATAAGCTTTGTGGATCCCAGAGTAGATATATTACAAGCTTACTATTACTATATCAAAGGGGTATATAAAGAGGGTTTCCCAGATTTTCCACCTTTGATTTTTAACTTCACAGCTGAGGACTTCCCTCTGATATTGGAAATACCAGAGAGGGACACAAAGGTGAAGGTTTTGGAATATGGATCGGATGTGGAAATTGTTTTTCAAAACACAAATTTAGTGGCTGGGATAGATCATCCCATGCATCTTCATGGCCATAGCTTCCACATTGTTGGAACTGGCTTTGGCAATTTTGATGTAAAAAAGGACCCATTGAGCTTCAATCTTGTAGATCCTCCTCTTAGGAACACAGTTACTGTGCCCTTAAGTGGATGGGCCGCTGTCAGATTCAAGGCCGGAAATCCTGGAGTGTGGTTTTTACACTGTCATCTTGATCGTCACCTAACATGGGGAATGCACACCGTCTTCATCGTAAAGAATGGAAAACACCCAAATGAAACGTTGCTGCCTCCGCCACCAGACATGCCGCCGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

581

Amino Acids

64.65

Weight (kDa)

8.02

Isoelectric Point (pI)

24.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	33 - 146	6.6e-38	Multicopper oxidase
Cu-oxidase	PF00394	159 - 308	1.5e-40	Multicopper oxidase
Cu-oxidase_2	PF07731	450 - 563	1e-39	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	87, 186
AccII	CGCG	1 cut(s)	758
AciI	CCGC	4 cut(s)	756, 1584, 1718, 1733
AclI	AACGTT	1 cut(s)	1706
AclWI	GGATC	4 cut(s)	1217, 1230, 1396, 1532
AcoI	YGGCCR	1 cut(s)	1459
AcsI	RAATTY	3 cut(s)	158, 533, 1420
AcuI	CTGAAG	3 cut(s)	14, 60, 495
AdeI	CACNNNGTG	1 cut(s)	308
AfaI	GTAC	2 cut(s)	54, 525
AfiI	CCNNNNNNNGG	7 cut(s)	375, 406, 440, 730, 1151, 1574, 1654
AflII	CTTAAG	1 cut(s)	1570
AgsI	TTSAA	9 cut(s)	317, 631, 917, 968, 1060, 1122, 1412, 1528, 1597
AjnI	CCWGG	5 cut(s)	439, 592, 790, 832, 1609
AleI	CACNNNNGTG	1 cut(s)	1367
Alw26I	GTCTC	1 cut(s)	591
AlwI	GGATC	4 cut(s)	1217, 1230, 1396, 1532
AlwNI	CAGNNNCTG	1 cut(s)	1562
Ama87I	CYCGRG	1 cut(s)	399
AoxI	GGCC	3 cut(s)	1459, 1581, 1599
ApeKI	GCWGC	8 cut(s)	126, 680, 737, 746, 851, 1043, 1193, 1711
ApoI	RAATTY	3 cut(s)	158, 533, 1420
Asp700I	GAANNNNTTC	1 cut(s)	1117
AspLEI	GCGC	1 cut(s)	760
AspS9I	GGNCC	7 cut(s)	167, 287, 396, 643, 1172, 1513, 1581
AsuC2I	CCSGG	4 cut(s)	165, 321, 400, 401
AsuHPI	GGTGA	4 cut(s)	506, 1144, 1381, 1637
AvaI	CYCGRG	1 cut(s)	399
AvaII	GGWCC	6 cut(s)	167, 287, 396, 643, 1172, 1513
BaeGI	GKGCMC	1 cut(s)	1569
BalI	TGGCCA	1 cut(s)	1461
BamHI	GGATCC	1 cut(s)	1222
BarI	GAAGNNNNNNTAC	2 cut(s)	45, 77
BbsI	GAAGAC	1 cut(s)	1663
BbvCI	CCTCAGC	1 cut(s)	1323
BbvI	GCAGC	8 cut(s)	138, 667, 749, 758, 838, 1055, 1180, 1698
BccI	CCATC	6 cut(s)	278, 587, 666, 920, 971, 1572
BceAI	ACGGC	1 cut(s)	1720
BciT130I	CCWGG	5 cut(s)	441, 594, 792, 834, 1611
BcnI	CCSGG	4 cut(s)	165, 321, 400, 401
BcoDI	GTCTC	1 cut(s)	591
BfaI	CTAG	4 cut(s)	447, 855, 875, 1076
BfrI	CTTAAG	1 cut(s)	1570
Bme1390I	CCNGG	9 cut(s)	165, 321, 400, 401, 441, 594, 792, 834, 1611
Bme18I	GGWCC	6 cut(s)	167, 287, 396, 643, 1172, 1513
BmeT110I	CYCGRG	1 cut(s)	399
BmgT120I	GGNCC	7 cut(s)	167, 287, 396, 643, 1172, 1513, 1581
BmiI	GGNNCC	6 cut(s)	168, 367, 398, 1174, 1224, 1515
BmrFI	CCNGG	9 cut(s)	165, 321, 400, 401, 441, 594, 792, 834, 1611
BmsI	GCATC	4 cut(s)	559, 702, 796, 1459
BoxI	GACNNNNGTC	1 cut(s)	731
BpiI	GAAGAC	1 cut(s)	1663
BpmI	CTGGAG	1 cut(s)	1632
Bpu10I	CCTNAGC	1 cut(s)	1323
BpuMI	CCSGG	4 cut(s)	165, 321, 400, 401
BsaI	GGTCTC	1 cut(s)	591
BsaJI	CCNNGG	5 cut(s)	266, 275, 399, 865, 1150
BsaWI	WCCGGW	1 cut(s)	545
BsaXI	ACNNNNNCTCC	4 cut(s)	183, 213, 772, 802
Bsc4I	CCNNNNNNNGG	7 cut(s)	375, 406, 440, 730, 1151, 1574, 1654
Bse1I	ACTGG	4 cut(s)	170, 251, 1197, 1489
Bse3DI	GCAATG	1 cut(s)	1080
BseBI	CCWGG	5 cut(s)	441, 594, 792, 834, 1611
BseDI	CCNNGG	5 cut(s)	266, 275, 399, 865, 1150
BseGI	GGATG	5 cut(s)	693, 770, 1399, 1441, 1583
BseLI	CCNNNNNNNGG	7 cut(s)	375, 406, 440, 730, 1151, 1574, 1654
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	2 cut(s)	720, 1314
BseNI	ACTGG	4 cut(s)	170, 251, 1197, 1489
BseRI	GAGGAG	1 cut(s)	1533
BseSI	GKGCMC	1 cut(s)	1569
BseXI	GCAGC	8 cut(s)	138, 667, 749, 758, 838, 1055, 1180, 1698
BseYI	CCCAGC	1 cut(s)	1430
BsgI	GTGCAG	1 cut(s)	145
Bsh1236I	CGCG	1 cut(s)	758
BshFI	GGCC	3 cut(s)	1461, 1583, 1601
BsiHKCI	CYCGRG	1 cut(s)	399
BsiSI	CCGG	5 cut(s)	164, 320, 400, 546, 1602
BslFI	GGGAC	4 cut(s)	180, 382, 1195, 1373
BslI	CCNNNNNNNGG	7 cut(s)	375, 406, 440, 730, 1151, 1574, 1654
BsmAI	GTCTC	1 cut(s)	591
BsmFI	GGGAC	4 cut(s)	180, 382, 1195, 1373
BsmI	GAATGC	2 cut(s)	1045, 1665
BsnI	GGCC	3 cut(s)	1461, 1583, 1601
Bso31I	GGTCTC	1 cut(s)	591
BsoBI	CYCGRG	1 cut(s)	399
Bsp1286I	GDGCHC	1 cut(s)	1569
Bsp143I	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
Bsp19I	CCATGG	1 cut(s)	275
BspACI	CCGC	4 cut(s)	756, 1584, 1718, 1733
BspANI	GGCC	3 cut(s)	1461, 1583, 1601
BspCNI	CTCAG	2 cut(s)	719, 1315
BspFNI	CGCG	1 cut(s)	758
BspLI	GGNNCC	6 cut(s)	168, 367, 398, 1174, 1224, 1515
BspPI	GGATC	4 cut(s)	1217, 1230, 1396, 1532
BspTI	CTTAAG	1 cut(s)	1570
BspTNI	GGTCTC	1 cut(s)	591
BsrDI	GCAATG	1 cut(s)	1080
BsrI	ACTGG	4 cut(s)	170, 251, 1197, 1489
BssECI	CCNNGG	5 cut(s)	266, 275, 399, 865, 1150
BssMI	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
BssT1I	CCWWGG	3 cut(s)	275, 865, 1150
Bst2UI	CCWGG	5 cut(s)	441, 594, 792, 834, 1611
Bst4CI	ACNGT	9 cut(s)	148, 199, 409, 730, 1126, 1558, 1564, 1631, 1669
Bst6I	CTCTTC	1 cut(s)	62
BstAFI	CTTAAG	1 cut(s)	1570
BstC8I	GCNNGC	1 cut(s)	381
BstDEI	CTNAG	5 cut(s)	9, 132, 706, 1323, 1547
BstDSI	CCRYGG	1 cut(s)	275
BstEII	GGTNACC	1 cut(s)	869
BstF5I	GGATG	5 cut(s)	693, 770, 1399, 1441, 1583
BstFNI	CGCG	1 cut(s)	758
BstHHI	GCGC	1 cut(s)	760
BstKTI	GATC	6 cut(s)	345, 1225, 1391, 1441, 1540, 1642
BstMAI	GTCTC	1 cut(s)	591
BstMBI	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
BstMWI	GCNNNNNNNGC	7 cut(s)	32, 743, 746, 755, 857, 1071, 1717
BstNI	CCWGG	5 cut(s)	441, 594, 792, 834, 1611
BstNSI	RCATGY	1 cut(s)	1732
BstPAI	GACNNNNGTC	1 cut(s)	731
BstPI	GGTNACC	1 cut(s)	869
BstSCI	CCNGG	9 cut(s)	163, 319, 398, 399, 439, 592, 790, 832, 1609
BstSLI	GKGCMC	1 cut(s)	1569
BstUI	CGCG	1 cut(s)	758
BstV1I	GCAGC	8 cut(s)	138, 667, 749, 758, 838, 1055, 1180, 1698
BstV2I	GAAGAC	1 cut(s)	1663
BstX2I	RGATCY	2 cut(s)	1222, 1537
BstXI	CCANNNNNNTGG	2 cut(s)	833, 1478
BstYI	RGATCY	2 cut(s)	1222, 1537
BsuRI	GGCC	3 cut(s)	1461, 1583, 1601
BtgI	CCRYGG	1 cut(s)	275
BtsCI	GGATG	5 cut(s)	693, 770, 1399, 1441, 1583
BtsI	GCAGTG	1 cut(s)	988
BtsIMutI	CAGTG	3 cut(s)	244, 988, 1627
Cac8I	GCNNGC	1 cut(s)	381
CaiI	CAGNNNCTG	1 cut(s)	1562
CfoI	GCGC	1 cut(s)	760
Cfr13I	GGNCC	7 cut(s)	167, 287, 396, 643, 1172, 1513, 1581
Cfr9I	CCCGGG	1 cut(s)	399
CseI	GACGC	1 cut(s)	752
CsiI	ACCWGGT	1 cut(s)	832
Csp6I	GTAC	2 cut(s)	53, 524
CspCI	CAANNNNNGTGG	4 cut(s)	1096, 1131, 1407, 1442
CviAII	CATG	9 cut(s)	251, 276, 413, 685, 847, 1447, 1457, 1653, 1729
CviQI	GTAC	2 cut(s)	53, 524
DdeI	CTNAG	5 cut(s)	9, 132, 706, 1323, 1547
DpnI	GATC	6 cut(s)	344, 1224, 1390, 1440, 1539, 1641
DpnII	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
DraIII	CACNNNGTG	1 cut(s)	308
EaeI	YGGCCR	1 cut(s)	1459
Eam1104I	CTCTTC	1 cut(s)	62
EarI	CTCTTC	1 cut(s)	62
EciI	GGCGGA	1 cut(s)	1707
Eco130I	CCWWGG	3 cut(s)	275, 865, 1150
Eco31I	GGTCTC	1 cut(s)	591
Eco47I	GGWCC	6 cut(s)	167, 287, 396, 643, 1172, 1513
Eco57I	CTGAAG	3 cut(s)	14, 60, 495
Eco88I	CYCGRG	1 cut(s)	399
Eco91I	GGTNACC	1 cut(s)	869
EcoO109I	RGGNCCY	2 cut(s)	1172, 1513
EcoO65I	GGTNACC	1 cut(s)	869
EcoRII	CCWGG	5 cut(s)	439, 592, 790, 832, 1609
EcoT14I	CCWWGG	3 cut(s)	275, 865, 1150
EcoT22I	ATGCAT	1 cut(s)	1452
ErhI	CCWWGG	3 cut(s)	275, 865, 1150
FaeI	CATG	9 cut(s)	254, 279, 416, 688, 850, 1450, 1460, 1656, 1732
FalI	AAGNNNNNCTT	2 cut(s)	354, 386
FaqI	GGGAC	4 cut(s)	180, 382, 1195, 1373
FatI	CATG	9 cut(s)	250, 275, 412, 684, 846, 1446, 1456, 1652, 1728
FokI	GGATG	5 cut(s)	680, 757, 1406, 1428, 1590
FspBI	CTAG	4 cut(s)	447, 855, 875, 1076
GlaI	GCGC	1 cut(s)	759
GsaI	CCCAGC	1 cut(s)	1434
GsuI	CTGGAG	1 cut(s)	1632
HaeIII	GGCC	3 cut(s)	1461, 1583, 1601
HapII	CCGG	5 cut(s)	164, 320, 400, 546, 1602
HgaI	GACGC	1 cut(s)	752
HhaI	GCGC	1 cut(s)	760
Hin1II	CATG	9 cut(s)	254, 279, 416, 688, 850, 1450, 1460, 1656, 1732
Hin6I	GCGC	1 cut(s)	758
HinP1I	GCGC	1 cut(s)	758
HincII	GTYRAC	1 cut(s)	590
HindII	GTYRAC	1 cut(s)	590
HindIII	AAGCTT	3 cut(s)	72, 1213, 1245
HinfI	GANTC	5 cut(s)	104, 255, 271, 1183, 1593
HpaII	CCGG	5 cut(s)	164, 320, 400, 546, 1602
HphI	GGTGA	4 cut(s)	506, 1144, 1381, 1637
Hpy166II	GTNNAC	4 cut(s)	590, 643, 819, 1135
Hpy188I	TCNGA	7 cut(s)	283, 568, 622, 668, 1338, 1393, 1592
Hpy188III	TCNNGA	3 cut(s)	97, 290, 1637
Hpy8I	GTNNAC	4 cut(s)	590, 643, 819, 1135
Hpy99I	CGWCG	1 cut(s)	409
HpyAV	CCTTC	5 cut(s)	71, 356, 1028, 1163, 1366
HpyCH4III	ACNGT	9 cut(s)	148, 199, 409, 730, 1126, 1558, 1564, 1631, 1669
HpyCH4IV	ACGT	1 cut(s)	1706
HpyCH4V	TGCA	4 cut(s)	126, 1043, 1450, 1663
HpyF10VI	GCNNNNNNNGC	7 cut(s)	32, 743, 746, 755, 857, 1071, 1717
HpyF3I	CTNAG	5 cut(s)	9, 132, 706, 1323, 1547
HpySE526I	ACGT	1 cut(s)	1706
Hsp92II	CATG	9 cut(s)	254, 279, 416, 688, 850, 1450, 1460, 1656, 1732
HspAI	GCGC	1 cut(s)	758
Kzo9I	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
LmnI	GCTCC	4 cut(s)	416, 669, 955, 1006
Lsp1109I	GCAGC	8 cut(s)	138, 667, 749, 758, 838, 1055, 1180, 1698
LweI	GCATC	4 cut(s)	559, 702, 796, 1459
MabI	ACCWGGT	1 cut(s)	832
MaeI	CTAG	4 cut(s)	447, 855, 875, 1076
MaeII	ACGT	1 cut(s)	1706
MaeIII	GTNAC	3 cut(s)	869, 1558, 1643
MalI	GATC	6 cut(s)	344, 1224, 1390, 1440, 1539, 1641
MboI	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
MboII	GAAGA	5 cut(s)	49, 352, 694, 1445, 1663
MflI	RGATCY	2 cut(s)	1222, 1537
MhlI	GDGCHC	1 cut(s)	1569
MlsI	TGGCCA	1 cut(s)	1461
MluCI	AATT	8 cut(s)	88, 158, 420, 533, 1113, 1401, 1420, 1495
MluNI	TGGCCA	1 cut(s)	1461
MlyI	GAGTC	2 cut(s)	264, 1177
MmeI	TCCRAC	1 cut(s)	1459
Mox20I	TGGCCA	1 cut(s)	1461
Mph1103I	ATGCAT	1 cut(s)	1452
MroXI	GAANNNNTTC	1 cut(s)	1117
MscI	TGGCCA	1 cut(s)	1461
MseI	TTAA	5 cut(s)	150, 176, 1068, 1311, 1571
MslI	CAYNNNNRTG	4 cut(s)	249, 1367, 1455, 1698
Msp20I	TGGCCA	1 cut(s)	1461
MspA1I	CMGCKG	2 cut(s)	1322, 1586
MspCI	CTTAAG	1 cut(s)	1570
MspI	CCGG	5 cut(s)	164, 320, 400, 546, 1602
MspR9I	CCNGG	9 cut(s)	165, 321, 400, 401, 441, 594, 792, 834, 1611
Mva1269I	GAATGC	2 cut(s)	1045, 1665
MvaI	CCWGG	5 cut(s)	441, 594, 792, 834, 1611
MvnI	CGCG	1 cut(s)	758
MwoI	GCNNNNNNNGC	7 cut(s)	32, 743, 746, 755, 857, 1071, 1717
NciI	CCSGG	4 cut(s)	165, 321, 400, 401
NcoI	CCATGG	1 cut(s)	275
NdeII	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
NlaIII	CATG	9 cut(s)	254, 279, 416, 688, 850, 1450, 1460, 1656, 1732
NlaIV	GGNNCC	6 cut(s)	168, 367, 398, 1174, 1224, 1515
NmuCI	GTSAC	1 cut(s)	1643
NsiI	ATGCAT	1 cut(s)	1452
NspI	RCATGY	1 cut(s)	1732
OliI	CACNNNNGTG	1 cut(s)	1367
PctI	GAATGC	2 cut(s)	1045, 1665
PdmI	GAANNNNTTC	1 cut(s)	1117
PfeI	GAWTC	3 cut(s)	104, 271, 1593
PfoI	TCCNGGA	3 cut(s)	163, 790, 1609
PleI	GAGTC	2 cut(s)	263, 1177
PpsI	GAGTC	2 cut(s)	263, 1177
PpuMI	RGGWCCY	2 cut(s)	1172, 1513
PshAI	GACNNNNGTC	1 cut(s)	731
PsiI	TTATAA	2 cut(s)	87, 186
Psp1406I	AACGTT	1 cut(s)	1706
Psp5II	RGGWCCY	2 cut(s)	1172, 1513
Psp6I	CCWGG	5 cut(s)	439, 592, 790, 832, 1609
PspEI	GGTNACC	1 cut(s)	869
PspFI	CCCAGC	1 cut(s)	1430
PspGI	CCWGG	5 cut(s)	439, 592, 790, 832, 1609
PspN4I	GGNNCC	6 cut(s)	168, 367, 398, 1174, 1224, 1515
PspPI	GGNCC	7 cut(s)	167, 287, 396, 643, 1172, 1513, 1581
PspPPI	RGGWCCY	2 cut(s)	1172, 1513
PstNI	CAGNNNCTG	1 cut(s)	1562
PsuI	RGATCY	2 cut(s)	1222, 1537
PvuII	CAGCTG	1 cut(s)	1322
RsaI	GTAC	2 cut(s)	54, 525
RsaNI	GTAC	2 cut(s)	53, 524
RseI	CAYNNNNRTG	4 cut(s)	249, 1367, 1455, 1698
SaqAI	TTAA	5 cut(s)	150, 176, 1068, 1311, 1571
Sau3AI	GATC	6 cut(s)	342, 1222, 1388, 1438, 1537, 1639
Sau96I	GGNCC	7 cut(s)	167, 287, 396, 643, 1172, 1513, 1581
SchI	GAGTC	2 cut(s)	264, 1177
ScrFI	CCNGG	9 cut(s)	165, 321, 400, 401, 441, 594, 792, 834, 1611
SduI	GDGCHC	1 cut(s)	1569
SexAI	ACCWGGT	1 cut(s)	832
SfaNI	GCATC	4 cut(s)	559, 702, 796, 1459
SinI	GGWCC	6 cut(s)	167, 287, 396, 643, 1172, 1513
SmaI	CCCGGG	1 cut(s)	401
SmiMI	CAYNNNNRTG	4 cut(s)	249, 1367, 1455, 1698
SmlI	CTYRAG	1 cut(s)	1570
SmoI	CTYRAG	1 cut(s)	1570
Sse9I	AATT	8 cut(s)	88, 158, 420, 533, 1113, 1401, 1420, 1495
SsiI	CCGC	4 cut(s)	756, 1584, 1718, 1733
SspI	AATATT	3 cut(s)	141, 489, 963
SspMI	CTAG	4 cut(s)	447, 855, 875, 1076
StyD4I	CCNGG	9 cut(s)	163, 319, 398, 399, 439, 592, 790, 832, 1609
StyI	CCWWGG	3 cut(s)	275, 865, 1150
TaaI	ACNGT	9 cut(s)	148, 199, 409, 730, 1126, 1558, 1564, 1631, 1669
TaiI	ACGT	1 cut(s)	1709
TaqI	TCGA	2 cut(s)	1111, 1186
TasI	AATT	8 cut(s)	88, 158, 420, 533, 1113, 1401, 1420, 1495
TatI	WGTACW	1 cut(s)	52
TauI	GCSGC	2 cut(s)	1586, 1735
TfiI	GAWTC	3 cut(s)	104, 271, 1593
Tru1I	TTAA	5 cut(s)	150, 176, 1068, 1311, 1571
Tru9I	TTAA	5 cut(s)	150, 176, 1068, 1311, 1571
TscAI	CASTG	3 cut(s)	251, 988, 1634
TseFI	GTSAC	1 cut(s)	1643
TseI	GCWGC	8 cut(s)	126, 680, 737, 746, 851, 1043, 1193, 1711
Tsp45I	GTSAC	1 cut(s)	1643
TspDTI	ATGAA	9 cut(s)	53, 203, 401, 546, 701, 1217, 1445, 1663, 1716
TspGWI	ACGGA	1 cut(s)	948
TspMI	CCCGGG	1 cut(s)	399
TspRI	CASTG	3 cut(s)	251, 988, 1634
Vha464I	CTTAAG	1 cut(s)	1570
VpaK11BI	GGWCC	6 cut(s)	167, 287, 396, 643, 1172, 1513
XapI	RAATTY	3 cut(s)	158, 533, 1420
XceI	RCATGY	1 cut(s)	1732
XmaI	CCCGGG	1 cut(s)	399
XmnI	GAANNNNTTC	1 cut(s)	1117
XspI	CTAG	4 cut(s)	447, 855, 875, 1076
Zsp2I	ATGCAT	1 cut(s)	1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.