Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Reverse (-)

36397640 .. 36401747

Gene Structure 4108 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1308000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGAGTATTTTAATTAGCTTGCAACTTGTAGTCGGCTTGCTATTGTCTACGGTTGGCATCTTCCATTGCCAAGCTTTGTCTCCTCGTTACACTTTTGTGGTTGAAGAAACTTCATACAAACGACTGTGTAGCACAAAGAACATCTTGACTGTAAACGGCCAGTTTCCGGGACCAACATTGTATGCTCGTGCTGGAGATACTGTCATAGTGGATGTCTATAACAAGGGCAATCGTAACATTACCCTCCATTGGCATGGAGTTAAGCAACCGAGGAACCCATGGTCAGACGGTCCTAATTACATCACGCAATGTCCTATTCAACCAGGAGCTAGGTTTACCCAAACCATTATATTTTCCTCAGAGGAAGGGACCCTATGGTGGCATGCTCACAGTGAGTGGGATCGAGCCACCGTCCACGGTGCTATAGTCATATACCCCAAGAAGGGAGCCACTTACCCTTTTACCAAGCCTCACGCAGAATTACCAATCATCTTGGGAGAATGGTGGAAGGAAGATATTGGACAAATTTACGATGAAACGATTCAAAGTGGTGGGGACCCTAATAATTCAGATGCTTACCTCATCAATGGTCAACCCGGCGATCTCTATCCTTGCTCAAAACCAGACACATTCAAGCTCATAGTTGATTACGGCAAAACCTACCTGCTCAGACTAATCAACTCTGCCGTGCAGGAGATGATGTTTTTCGCCATTGCCAATCACAACGTCACGGTTGTAGGCTCAGATGCTAGCTATACCAAGCCATTTTCAACAGATTATGTAACCATATCTCCAGGGCAAACTATTGATCTCTTGTTAAATGCCGACCAAAGCCCCAACAACTACTACATTGCTGCTAAAGCCTATGTTGCCGGGGCTAGAATTCCCTACGACAACACAACCACCACCGCATTACTCCGATACAACAGAAATTCTAGTTCAACCCCTACTTCGTTGCCTAATCTTCCTTCCCATAACGACACCAACGCATCAGTTCACTTTACCAGTAAACTCAAAAGCTTGGCTGATAAAAACCACCCTGTTGACGTGCCACACAAGATAACAACTCCTTTGTTTTTTACACTATCCATCAACACACTACCCTGCCCGAGCAATTCATGTACTGGGCCTAATGGGACACGTTTTGCCACCAGTATCAACAACATTAGCTTTGTCGACCCTACCATTGACATATTGCAAGCTTACTATTTCCATGTTAATGGGGCATTTGGAACTCGCTTTCCAAATTTCCCGCCCTTGCTGTTTAATTTTACAGCTCAGGACTTGCCGTTGTACCTACAGACGCCGAAGCAAGCGACGGAGGTGAAGATACTGGAGTACAACTCAACTGTGGAAATTGTGTTTCAGGGGACAAATTTGGTGGGAGGAGATGACCATCCGATGCATCTCCACGGATTCAGTTTCTACGTTGTGGGACGGGGGCTTGGGAATTTTGACAAGGACAAGGACCCTTTGACGTATAATCTTGTTGATCCTCCTCTTCAAAACACCATCGCTGTCCCTATAAATGGTTGGACTACCATTAGATTCAAGGCAGACAATCCTGGCGTTTGGTTTATGCACTGTCATCTGGATCGACATATGTCATGGGGCATGGACATGACGTTCATAGTGAAAAATGGAAAGGGCCCAGGAGCGCAAATGTTACCTCCGCCACAAGGAATGCCTCCATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

62.81

Weight (kDa)

6.54

Isoelectric Point (pI)

32.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 148	5.3e-40	Multicopper oxidase
Cu-oxidase	PF00394	161 - 310	1.1e-40	Multicopper oxidase
Cu-oxidase_2	PF07731	418 - 548	3.7e-42	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	672
AccI	GTMKAC	2 cut(s)	47, 1176
AciI	CCGC	3 cut(s)	909, 1253, 1673
AclWI	GGATC	3 cut(s)	408, 1487, 1602
AcoI	YGGCCR	1 cut(s)	157
AcsI	RAATTY	6 cut(s)	525, 882, 931, 1246, 1375, 1450
AcyI	GRCGYC	1 cut(s)	1304
AfaI	GTAC	3 cut(s)	1123, 1295, 1340
AfiI	CCNNNNNNNGG	7 cut(s)	166, 249, 378, 442, 443, 1529, 1679
AflIII	ACRYGT	1 cut(s)	1139
AgsI	TTSAA	8 cut(s)	104, 320, 545, 634, 771, 942, 1505, 1552
AjiI	CACGTC	1 cut(s)	1048
AjnI	CCWGG	4 cut(s)	322, 793, 1564, 1651
AleI	CACNNNNGTG	1 cut(s)	95
AloI	GAACNNNNNNTCC	4 cut(s)	1225, 1257, 1610, 1642
AluBI	AGCT	9 cut(s)	18, 74, 329, 637, 753, 1020, 1170, 1202, 1277
AluI	AGCT	9 cut(s)	18, 74, 329, 637, 753, 1020, 1170, 1202, 1277
Alw26I	GTCTC	1 cut(s)	84
AlwI	GGATC	3 cut(s)	408, 1487, 1602
Ama87I	CYCGRG	1 cut(s)	1108
AoxI	GGCC	3 cut(s)	157, 1127, 1648
ApaI	GGGCCC	1 cut(s)	1652
ApeKI	GCWGC	1 cut(s)	854
ApoI	RAATTY	6 cut(s)	525, 882, 931, 1246, 1375, 1450
Asp700I	GAANNNNTTC	1 cut(s)	540
AspLEI	GCGC	1 cut(s)	1660
AspS9I	GGNCC	8 cut(s)	170, 290, 369, 556, 1127, 1468, 1648, 1649
AsuC2I	CCSGG	3 cut(s)	168, 597, 874
AsuHPI	GGTGA	1 cut(s)	1336
AsuNHI	GCTAGC	1 cut(s)	749
AvaI	CYCGRG	1 cut(s)	1108
AvaII	GGWCC	5 cut(s)	170, 290, 369, 556, 1468
BaeGI	GKGCMC	1 cut(s)	1652
BaeI	ACNNNNGTAYC	2 cut(s)	1322, 1355
BanII	GRGCYC	1 cut(s)	1652
BauI	CACGAG	1 cut(s)	186
BbvI	GCAGC	1 cut(s)	841
BccI	CCATC	3 cut(s)	1097, 1404, 1520
BceAI	ACGGC	4 cut(s)	172, 667, 671, 1273
BciT130I	CCWGG	4 cut(s)	324, 795, 1566, 1653
BcnI	CCSGG	3 cut(s)	168, 597, 874
BcoDI	GTCTC	1 cut(s)	84
BfaI	CTAG	4 cut(s)	330, 750, 879, 936
BfmI	CTRYAG	2 cut(s)	423, 1298
BfuAI	ACCTGC	1 cut(s)	672
BisI	GCNGC	1 cut(s)	855
BlsI	GCNGC	1 cut(s)	856
Bme1390I	CCNGG	7 cut(s)	168, 324, 597, 795, 874, 1566, 1653
Bme18I	GGWCC	5 cut(s)	170, 290, 369, 556, 1468
BmeT110I	CYCGRG	1 cut(s)	1108
BmgBI	CACGTC	1 cut(s)	1048
BmgT120I	GGNCC	8 cut(s)	170, 290, 369, 556, 1127, 1468, 1648, 1649
BmiI	GGNNCC	9 cut(s)	171, 275, 370, 371, 448, 557, 558, 1470, 1650
BmrFI	CCNGG	7 cut(s)	168, 324, 597, 795, 874, 1566, 1653
BmrI	ACTGGG	1 cut(s)	1134
BmsI	GCATC	6 cut(s)	66, 562, 736, 998, 1392, 1414
BmtI	GCTAGC	1 cut(s)	753
BmuI	ACTGGG	1 cut(s)	1134
BoxI	GACNNNNGTC	1 cut(s)	1603
BplI	GAGNNNNNCTC	2 cut(s)	1328, 1360
BpmI	CTGGAG	3 cut(s)	213, 777, 1355
Bpu10I	CCTNAGC	1 cut(s)	1278
BpuMI	CCSGG	3 cut(s)	168, 597, 874
BsaBI	GATNNNNATC	2 cut(s)	606, 1395
BsaHI	GRCGYC	1 cut(s)	1304
BsaJI	CCNNGG	7 cut(s)	269, 278, 415, 794, 873, 1411, 1651
BsaXI	ACNNNNNCTCC	6 cut(s)	186, 216, 686, 716, 775, 805
Bsc4I	CCNNNNNNNGG	7 cut(s)	166, 249, 378, 442, 443, 1529, 1679
Bse1I	ACTGG	5 cut(s)	160, 1005, 1129, 1152, 1338
Bse3DI	GCAATG	4 cut(s)	64, 314, 711, 849
Bse8I	GATNNNNATC	2 cut(s)	606, 1395
BseBI	CCWGG	4 cut(s)	324, 795, 1566, 1653
BseDI	CCNNGG	7 cut(s)	269, 278, 415, 794, 873, 1411, 1651
BseGI	GGATG	2 cut(s)	217, 1396
BseJI	GATNNNNATC	2 cut(s)	606, 1395
BseLI	CCNNNNNNNGG	7 cut(s)	166, 249, 378, 442, 443, 1529, 1679
BseMI	GCAATG	4 cut(s)	64, 314, 711, 849
BseMII	CTCAG	4 cut(s)	372, 682, 756, 1292
BseNI	ACTGG	5 cut(s)	160, 1005, 1129, 1152, 1338
BseRI	GAGGAG	3 cut(s)	72, 1401, 1488
BseSI	GKGCMC	1 cut(s)	1652
BseXI	GCAGC	1 cut(s)	841
BsgI	GTGCAG	1 cut(s)	710
BshFI	GGCC	3 cut(s)	159, 1129, 1650
BsiHKCI	CYCGRG	1 cut(s)	1108
BsiSI	CCGG	3 cut(s)	167, 597, 873
BslFI	GGGAC	7 cut(s)	183, 382, 569, 1150, 1384, 1449, 1505
BslI	CCNNNNNNNGG	7 cut(s)	166, 249, 378, 442, 443, 1529, 1679
BsmAI	GTCTC	1 cut(s)	84
BsmFI	GGGAC	7 cut(s)	183, 382, 569, 1150, 1384, 1449, 1505
BsmI	GAATGC	1 cut(s)	1689
BsnI	GGCC	3 cut(s)	159, 1129, 1650
BsoBI	CYCGRG	1 cut(s)	1108
Bsp120I	GGGCCC	1 cut(s)	1648
Bsp1286I	GDGCHC	1 cut(s)	1652
Bsp143I	GATC	5 cut(s)	400, 601, 808, 1492, 1594
Bsp19I	CCATGG	1 cut(s)	278
BspACI	CCGC	3 cut(s)	909, 1253, 1673
BspANI	GGCC	3 cut(s)	159, 1129, 1650
BspCNI	CTCAG	4 cut(s)	371, 681, 755, 1291
BspLI	GGNNCC	9 cut(s)	171, 275, 370, 371, 448, 557, 558, 1470, 1650
BspMI	ACCTGC	1 cut(s)	672
BspOI	GCTAGC	1 cut(s)	753
BspPI	GGATC	3 cut(s)	408, 1487, 1602
BsrDI	GCAATG	4 cut(s)	64, 314, 711, 849
BsrI	ACTGG	5 cut(s)	160, 1005, 1129, 1152, 1338
BssECI	CCNNGG	7 cut(s)	269, 278, 415, 794, 873, 1411, 1651
BssMI	GATC	5 cut(s)	400, 601, 808, 1492, 1594
BssNI	GRCGYC	1 cut(s)	1304
BssSI	CACGAG	1 cut(s)	186
BssT1I	CCWWGG	1 cut(s)	278
Bst2BI	CACGAG	1 cut(s)	186
Bst2UI	CCWGG	4 cut(s)	324, 795, 1566, 1653
Bst6I	CTCTTC	1 cut(s)	1506
BstACI	GRCGYC	1 cut(s)	1304
BstC8I	GCNNGC	6 cut(s)	20, 38, 384, 751, 1200, 1314
BstDEI	CTNAG	4 cut(s)	358, 668, 742, 1278
BstDSI	CCRYGG	3 cut(s)	278, 415, 1411
BstF5I	GGATG	2 cut(s)	217, 1396
BstHHI	GCGC	1 cut(s)	1660
BstKTI	GATC	5 cut(s)	403, 604, 811, 1495, 1597
BstMAI	GTCTC	1 cut(s)	84
BstMBI	GATC	5 cut(s)	400, 601, 808, 1492, 1594
BstMWI	GCNNNNNNNGC	2 cut(s)	860, 869
BstNI	CCWGG	4 cut(s)	324, 795, 1566, 1653
BstNSI	RCATGY	1 cut(s)	386
BstPAI	GACNNNNGTC	1 cut(s)	1603
BstSCI	CCNGG	7 cut(s)	166, 322, 595, 793, 872, 1564, 1651
BstSFI	CTRYAG	2 cut(s)	423, 1298
BstSLI	GKGCMC	1 cut(s)	1652
BstV1I	GCAGC	1 cut(s)	841
BstXI	CCANNNNNNTGG	2 cut(s)	254, 1220
BsuRI	GGCC	3 cut(s)	159, 1129, 1650
BtgI	CCRYGG	3 cut(s)	278, 415, 1411
BtgZI	GCGATG	1 cut(s)	1498
BtrI	CACGTC	1 cut(s)	1048
BtsCI	GGATG	2 cut(s)	217, 1396
BtsIMutI	CAGTG	2 cut(s)	397, 1582
BveI	ACCTGC	1 cut(s)	672
Cac8I	GCNNGC	6 cut(s)	20, 38, 384, 751, 1200, 1314
CfoI	GCGC	1 cut(s)	1660
Cfr13I	GGNCC	8 cut(s)	170, 290, 369, 556, 1127, 1468, 1648, 1649
CseI	GACGC	1 cut(s)	1312
Csp6I	GTAC	3 cut(s)	1122, 1294, 1339
CspCI	CAANNNNNGTGG	2 cut(s)	1362, 1397
CviAII	CATG	9 cut(s)	254, 279, 383, 1119, 1214, 1608, 1615, 1621, 1692
CviQI	GTAC	3 cut(s)	1122, 1294, 1339
DdeI	CTNAG	4 cut(s)	358, 668, 742, 1278
DpnI	GATC	5 cut(s)	402, 603, 810, 1494, 1596
DpnII	GATC	5 cut(s)	400, 601, 808, 1492, 1594
EaeI	YGGCCR	1 cut(s)	157
Eam1104I	CTCTTC	1 cut(s)	1506
EarI	CTCTTC	1 cut(s)	1506
EciI	GGCGGA	1 cut(s)	1662
Eco130I	CCWWGG	1 cut(s)	278
Eco24I	GRGCYC	1 cut(s)	1652
Eco47I	GGWCC	5 cut(s)	170, 290, 369, 556, 1468
Eco88I	CYCGRG	1 cut(s)	1108
EcoO109I	RGGNCCY	4 cut(s)	369, 556, 1468, 1648
EcoRI	GAATTC	1 cut(s)	882
EcoRII	CCWGG	4 cut(s)	322, 793, 1564, 1651
EcoT14I	CCWWGG	1 cut(s)	278
EcoT22I	ATGCAT	1 cut(s)	1407
EcoT38I	GRGCYC	1 cut(s)	1652
ErhI	CCWWGG	1 cut(s)	278
FaeI	CATG	9 cut(s)	257, 282, 386, 1122, 1217, 1611, 1618, 1624, 1695
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	7 cut(s)	183, 382, 569, 1150, 1384, 1449, 1505
FatI	CATG	9 cut(s)	253, 278, 382, 1118, 1213, 1607, 1614, 1620, 1691
FauI	CCCGC	1 cut(s)	1260
FauNDI	CATATG	1 cut(s)	1602
FblI	GTMKAC	2 cut(s)	47, 1176
Fnu4HI	GCNGC	1 cut(s)	855
FokI	GGATG	2 cut(s)	224, 1383
FriOI	GRGCYC	1 cut(s)	1652
Fsp4HI	GCNGC	1 cut(s)	855
FspBI	CTAG	4 cut(s)	330, 750, 879, 936
GlaI	GCGC	1 cut(s)	1659
GluI	GCNGC	1 cut(s)	855
GsuI	CTGGAG	3 cut(s)	213, 777, 1355
HaeIII	GGCC	3 cut(s)	159, 1129, 1650
HapII	CCGG	3 cut(s)	167, 597, 873
HgaI	GACGC	1 cut(s)	1312
HhaI	GCGC	1 cut(s)	1660
Hin1I	GRCGYC	1 cut(s)	1304
Hin1II	CATG	9 cut(s)	257, 282, 386, 1122, 1217, 1611, 1618, 1624, 1695
Hin6I	GCGC	1 cut(s)	1658
HinP1I	GCGC	1 cut(s)	1658
HincII	GTYRAC	3 cut(s)	593, 1045, 1177
HindII	GTYRAC	3 cut(s)	593, 1045, 1177
HindIII	AAGCTT	3 cut(s)	72, 1018, 1200
HinfI	GANTC	3 cut(s)	541, 1416, 1548
HpaII	CCGG	3 cut(s)	167, 597, 873
HphI	GGTGA	1 cut(s)	1336
Hpy166II	GTNNAC	9 cut(s)	48, 154, 336, 415, 593, 997, 1010, 1045, 1177
Hpy188I	TCNGA	7 cut(s)	286, 361, 571, 671, 745, 920, 1401
Hpy188III	TCNNGA	3 cut(s)	145, 1280, 1592
Hpy8I	GTNNAC	9 cut(s)	48, 154, 336, 415, 593, 997, 1010, 1045, 1177
Hpy99I	CGWCG	1 cut(s)	1321
HpyAV	CCTTC	4 cut(s)	359, 436, 502, 978
HpyCH4IV	ACGT	6 cut(s)	726, 1047, 1141, 1428, 1478, 1625
HpyCH4V	TGCA	5 cut(s)	22, 691, 1198, 1405, 1582
HpyF10VI	GCNNNNNNNGC	2 cut(s)	860, 869
HpyF3I	CTNAG	4 cut(s)	358, 668, 742, 1278
HpySE526I	ACGT	6 cut(s)	726, 1047, 1141, 1428, 1478, 1625
Hsp92I	GRCGYC	1 cut(s)	1304
Hsp92II	CATG	9 cut(s)	257, 282, 386, 1122, 1217, 1611, 1618, 1624, 1695
HspAI	GCGC	1 cut(s)	1658
KflI	GGGWCCC	2 cut(s)	369, 556
Kzo9I	GATC	5 cut(s)	400, 601, 808, 1492, 1594
LmnI	GCTCC	3 cut(s)	326, 446, 1655
Lsp1109I	GCAGC	1 cut(s)	841
LweI	GCATC	6 cut(s)	66, 562, 736, 998, 1392, 1414
MaeI	CTAG	4 cut(s)	330, 750, 879, 936
MaeII	ACGT	6 cut(s)	726, 1047, 1141, 1428, 1478, 1625
MaeIII	GTNAC	5 cut(s)	86, 233, 727, 781, 1665
MalI	GATC	5 cut(s)	402, 603, 810, 1494, 1596
MboI	GATC	5 cut(s)	400, 601, 808, 1492, 1594
MboII	GAAGA	6 cut(s)	52, 116, 524, 956, 1339, 1493
MhlI	GDGCHC	1 cut(s)	1652
MmeI	TCCRAC	1 cut(s)	1514
Mph1103I	ATGCAT	1 cut(s)	1407
MroXI	GAANNNNTTC	1 cut(s)	540
MseI	TTAA	6 cut(s)	11, 261, 818, 1218, 1266, 1696
MslI	CAYNNNNRTG	4 cut(s)	95, 252, 1218, 1619
MspI	CCGG	3 cut(s)	167, 597, 873
MspR9I	CCNGG	7 cut(s)	168, 324, 597, 795, 874, 1566, 1653
Mva1269I	GAATGC	1 cut(s)	1689
MvaI	CCWGG	4 cut(s)	324, 795, 1566, 1653
MwoI	GCNNNNNNNGC	2 cut(s)	860, 869
NciI	CCSGG	3 cut(s)	168, 597, 874
NcoI	CCATGG	1 cut(s)	278
NdeI	CATATG	1 cut(s)	1602
NdeII	GATC	5 cut(s)	400, 601, 808, 1492, 1594
NheI	GCTAGC	1 cut(s)	749
NlaIII	CATG	9 cut(s)	257, 282, 386, 1122, 1217, 1611, 1618, 1624, 1695
NlaIV	GGNNCC	9 cut(s)	171, 275, 370, 371, 448, 557, 558, 1470, 1650
NmuCI	GTSAC	1 cut(s)	727
NsiI	ATGCAT	1 cut(s)	1407
NspI	RCATGY	1 cut(s)	386
OliI	CACNNNNGTG	1 cut(s)	95
PaeI	GCATGC	1 cut(s)	386
PctI	GAATGC	1 cut(s)	1689
PdmI	GAANNNNTTC	1 cut(s)	540
PfeI	GAWTC	3 cut(s)	541, 1416, 1548
PfoI	TCCNGGA	1 cut(s)	166
PkrI	GCNGC	1 cut(s)	856
PpuMI	RGGWCCY	3 cut(s)	369, 556, 1468
PshAI	GACNNNNGTC	1 cut(s)	1603
Psp5II	RGGWCCY	3 cut(s)	369, 556, 1468
Psp6I	CCWGG	4 cut(s)	322, 793, 1564, 1651
PspGI	CCWGG	4 cut(s)	322, 793, 1564, 1651
PspN4I	GGNNCC	9 cut(s)	171, 275, 370, 371, 448, 557, 558, 1470, 1650
PspOMI	GGGCCC	1 cut(s)	1648
PspPI	GGNCC	8 cut(s)	170, 290, 369, 556, 1127, 1468, 1648, 1649
PspPPI	RGGWCCY	3 cut(s)	369, 556, 1468
RsaI	GTAC	3 cut(s)	1123, 1295, 1340
RsaNI	GTAC	3 cut(s)	1122, 1294, 1339
RseI	CAYNNNNRTG	4 cut(s)	95, 252, 1218, 1619
SalI	GTCGAC	1 cut(s)	1175
SaqAI	TTAA	6 cut(s)	11, 261, 818, 1218, 1266, 1696
SatI	GCNGC	1 cut(s)	855
Sau3AI	GATC	5 cut(s)	400, 601, 808, 1492, 1594
Sau96I	GGNCC	8 cut(s)	170, 290, 369, 556, 1127, 1468, 1648, 1649
ScrFI	CCNGG	7 cut(s)	168, 324, 597, 795, 874, 1566, 1653
SduI	GDGCHC	1 cut(s)	1652
SfaNI	GCATC	6 cut(s)	66, 562, 736, 998, 1392, 1414
SfcI	CTRYAG	2 cut(s)	423, 1298
SinI	GGWCC	5 cut(s)	170, 290, 369, 556, 1468
SmiMI	CAYNNNNRTG	4 cut(s)	95, 252, 1218, 1619
SphI	GCATGC	1 cut(s)	386
SsiI	CCGC	3 cut(s)	909, 1253, 1673
SspMI	CTAG	4 cut(s)	330, 750, 879, 936
StyD4I	CCNGG	7 cut(s)	166, 322, 595, 793, 872, 1564, 1651
StyI	CCWWGG	1 cut(s)	278
TaiI	ACGT	6 cut(s)	729, 1050, 1144, 1431, 1481, 1628
TaqI	TCGA	3 cut(s)	403, 1176, 1597
TatI	WGTACW	2 cut(s)	1121, 1338
TfiI	GAWTC	3 cut(s)	541, 1416, 1548
Tru1I	TTAA	6 cut(s)	11, 261, 818, 1218, 1266, 1696
Tru9I	TTAA	6 cut(s)	11, 261, 818, 1218, 1266, 1696
TscAI	CASTG	2 cut(s)	397, 1589
TseFI	GTSAC	1 cut(s)	727
TseI	GCWGC	1 cut(s)	854
Tsp45I	GTSAC	1 cut(s)	727
TspDTI	ATGAA	4 cut(s)	102, 549, 1107, 1618
TspGWI	ACGGA	2 cut(s)	1334, 1428
TspRI	CASTG	2 cut(s)	397, 1589
VpaK11BI	GGWCC	5 cut(s)	170, 290, 369, 556, 1468
XapI	RAATTY	6 cut(s)	525, 882, 931, 1246, 1375, 1450
XceI	RCATGY	1 cut(s)	386
XmiI	GTMKAC	2 cut(s)	47, 1176
XmnI	GAANNNNTTC	1 cut(s)	540
XspI	CTAG	4 cut(s)	330, 750, 879, 936
Zsp2I	ATGCAT	1 cut(s)	1407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.