Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Reverse (-)

32640868 .. 32643145

Gene Structure 2278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018611

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1656 bp

ATGAAGGTTTCCAGAATTACCCTGCATCTGCTACTTCTGGGGTTGTTATTGGCTGTTAATGGCTTCCTCCATTGCCAAGCTTGGCCAGCTCGTTACACTTTTGTGGTGGAAAACACTCCATACAAGAGACTCTGCAGCACAAAGAACATCTTGACTGTAAATGGCCAGTTTCCGGGACCGACTTTGTATGCTCACAAAGGAGACACTATCATCGTCGATGTCTTTAACAAAGGCAATCGTAACATTACTCTCCACTGGCATGGTGTTGCGCAACCAAGATATCCATGGTCGGACGGACCAGAGTATATCACACAGTGCCCAATTCAACCAGGGGCCAAGTTCACCCAAAAGATCATTTTCTCGAAGGAGGAAGGCACCCTTTGGTGGCATGCTCACAGTGAGTGGGATCGTGCCACAGTCCATGGTCCCATCATCATATACCCCAACAAGAACAACAAATACCCTTTTGCCAAGCCTCATGCAGAAATTCCAATCATATTAGGAGAGTGGTGGAAGGTAGATATAGGGAAGCTTTATACTCAAACTATTCAATCCGGAGGGGACCCTAATACTTCCGACGCTTACCTCATCAATGGTCAACCTGGCGATCTGTATCCCTGCTCTAAATCAGAGACGTTCAAGATGATGGTTGATTATGGCAAAACCTACCTACTGAGACTAATTAACTCCGGTGTGCAAGAGATTCTGTTTTTCGCCATCGCCAATCACAAAGTCACAGTTGTAGGGACAGATGCTAGCTACACCAAACCTTTCACAACCGATTATAGGCCTAACCACTACTACGTGGCCGCTACAGCGTACGTAGGTGGCGCTGTTCCTTATGATAACACCACCACCACAGCCCTGCTTCAATACACTAATCGGGGTTACACCCCTTCTTCAACCCCTATGTTTCCTGATCTTCCTGCTCACAATGACACTAATGCATCAGTTCATTTTAGTGGTAGTCTCAGGAGCTTGGCTGATAAAAACCACCCCATTGACGTTCCACTAAAAATTACAACTCCCTTGTTTTATACCGTCTCCGTCAACACGTTCCAGTGCCCAAATAATTCATGCGCCGGGCCTAATGGGACGCGTCTGGCTGCTAGTATAAACAACATTAGCTTTGTGAACCCTAGCACTGACATACTACAAGCTTACTATTACCATGTCAACGGGCAATTTGGAACTCGGTTTCCAAGTTCCCCGCCTCTGCTGTTTAACTTTACAGCGCAGTACTTGCCGCTGTACCTTCAGACCCCGAAACGAGGGACGGAGGTGCAGGTACTGGAGTACAACGCGACAGTGGAGCTTGTGTTTCAGGGGACTAATTTGGTGGCAGGGGATGACCATCCAATGCATCTTCATGGTTACAGTTTCTATGTGGTTGGATTGGGGCTTGGGAACTTTGACAAGGATAAGGACCCTTTGAAATACAATCTTGTTGATCCCCCTCTTCAAAACACCATTGCTGTCCCTGTAAATGGGTGGACTACCATCAGATTCAAGGCTGACAATCCTGGAGTTTGGTTTATGCATTGCCATCTGGATAGGCATATGTCATGGGGCATGGATACAACATTCATAGTGAAAAATGGAGAGGGACCTAAAGCTCAAATCTTGCCTCCACCACCAGATATGCCACCTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

552

Amino Acids

61.66

Weight (kDa)

8.0

Isoelectric Point (pI)

31.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	36 - 150	1.9e-39	Multicopper oxidase
Cu-oxidase	PF00394	163 - 261	2.6e-25	Multicopper oxidase
Cu-oxidase_2	PF07731	400 - 534	2e-41	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	270
Acc36I	ACCTGC	1 cut(s)	1276
AccB1I	GGYRCC	1 cut(s)	374
AccII	CGCG	2 cut(s)	1099, 1304
AccIII	TCCGGA	1 cut(s)	554
AciI	CCGC	3 cut(s)	810, 1211, 1247
AclWI	GGATC	2 cut(s)	414, 1445
AcoI	YGGCCR	3 cut(s)	83, 163, 807
AcsI	RAATTY	1 cut(s)	486
AcuI	CTGAAG	1 cut(s)	1241
AdeI	CACNNNGTG	1 cut(s)	315
AfaI	GTAC	5 cut(s)	821, 1241, 1253, 1290, 1298
AfiI	CCNNNNNNNGG	5 cut(s)	172, 384, 786, 1271, 1487
AflIII	ACRYGT	2 cut(s)	1053, 1097
AgsI	TTSAA	8 cut(s)	326, 551, 640, 872, 903, 1435, 1463, 1510
AjnI	CCWGG	3 cut(s)	328, 601, 1522
AleI	CACNNNNGTG	1 cut(s)	101
AloI	GAACNNNNNNTCC	2 cut(s)	1183, 1215
AluBI	AGCT	9 cut(s)	80, 89, 532, 759, 978, 1128, 1160, 1315, 1616
AluI	AGCT	9 cut(s)	80, 89, 532, 759, 978, 1128, 1160, 1315, 1616
Alw26I	GTCTC	6 cut(s)	121, 195, 626, 670, 974, 1048
AlwI	GGATC	2 cut(s)	414, 1445
AlwNI	CAGNNNCTG	1 cut(s)	1291
Aor13HI	TCCGGA	1 cut(s)	554
AoxI	GGCC	6 cut(s)	83, 163, 333, 788, 807, 1085
ApeKI	GCWGC	2 cut(s)	135, 1106
ApoI	RAATTY	1 cut(s)	486
AspLEI	GCGC	4 cut(s)	271, 833, 1082, 1237
AspS9I	GGNCC	8 cut(s)	176, 296, 333, 425, 562, 1085, 1426, 1607
AsuC2I	CCSGG	2 cut(s)	174, 1084
AsuHPI	GGTGA	1 cut(s)	334
AsuNHI	GCTAGC	1 cut(s)	755
AvaII	GGWCC	6 cut(s)	176, 296, 425, 562, 1426, 1607
BaeGI	GKGCMC	2 cut(s)	320, 1067
BaeI	ACNNNNGTAYC	2 cut(s)	1280, 1313
BalI	TGGCCA	2 cut(s)	85, 165
BanI	GGYRCC	1 cut(s)	374
BbvI	GCAGC	2 cut(s)	147, 1093
BccI	CCATC	6 cut(s)	437, 640, 725, 1362, 1508, 1554
BciT130I	CCWGG	3 cut(s)	330, 603, 1524
BciVI	GTATCC	2 cut(s)	624, 1570
BcnI	CCSGG	2 cut(s)	174, 1084
BcoDI	GTCTC	6 cut(s)	121, 195, 626, 670, 974, 1048
BfaI	CTAG	3 cut(s)	756, 1110, 1140
BfmI	CTRYAG	2 cut(s)	133, 813
BfoI	RGCGCY	1 cut(s)	834
BfuAI	ACCTGC	1 cut(s)	1276
BfuI	GTATCC	2 cut(s)	624, 1570
BisI	GCNGC	4 cut(s)	136, 810, 1107, 1247
BlsI	GCNGC	4 cut(s)	137, 811, 1108, 1248
BmcAI	AGTACT	1 cut(s)	1241
Bme1390I	CCNGG	5 cut(s)	174, 330, 603, 1084, 1524
Bme18I	GGWCC	6 cut(s)	176, 296, 425, 562, 1426, 1607
BmgT120I	GGNCC	8 cut(s)	176, 296, 333, 425, 562, 1085, 1426, 1607
BmiI	GGNNCC	8 cut(s)	177, 334, 376, 427, 563, 564, 1428, 1608
BmrFI	CCNGG	5 cut(s)	174, 330, 603, 1084, 1524
BmsI	GCATC	4 cut(s)	34, 742, 956, 1372
BmtI	GCTAGC	1 cut(s)	759
BpmI	CTGGAG	2 cut(s)	1313, 1545
BpuMI	CCSGG	2 cut(s)	174, 1084
BsaAI	YACGTR	2 cut(s)	805, 823
BsaBI	GATNNNNATC	2 cut(s)	612, 1353
BsaJI	CCNNGG	3 cut(s)	284, 329, 421
BsaWI	WCCGGW	2 cut(s)	554, 689
BsaXI	ACNNNNNCTCC	2 cut(s)	1304, 1334
Bsc4I	CCNNNNNNNGG	5 cut(s)	172, 384, 786, 1271, 1487
Bse1I	ACTGG	4 cut(s)	166, 260, 1060, 1296
Bse3DI	GCAATG	3 cut(s)	70, 1470, 1540
Bse8I	GATNNNNATC	2 cut(s)	612, 1353
BseAI	TCCGGA	1 cut(s)	554
BseBI	CCWGG	3 cut(s)	330, 603, 1524
BseDI	CCNNGG	3 cut(s)	284, 329, 421
BseGI	GGATG	2 cut(s)	1354, 1354
BseJI	GATNNNNATC	2 cut(s)	612, 1353
BseLI	CCNNNNNNNGG	5 cut(s)	172, 384, 786, 1271, 1487
BseMI	GCAATG	3 cut(s)	70, 1470, 1540
BseMII	CTCAG	2 cut(s)	665, 985
BseNI	ACTGG	4 cut(s)	166, 260, 1060, 1296
BseSI	GKGCMC	2 cut(s)	320, 1067
BseXI	GCAGC	2 cut(s)	147, 1093
BsgI	GTGCAG	1 cut(s)	1304
Bsh1236I	CGCG	2 cut(s)	1099, 1304
BshFI	GGCC	6 cut(s)	85, 165, 335, 790, 809, 1087
BshNI	GGYRCC	1 cut(s)	374
BsiSI	CCGG	4 cut(s)	173, 555, 690, 1083
BsiWI	CGTACG	1 cut(s)	819
BslFI	GGGAC	9 cut(s)	189, 411, 575, 760, 1108, 1288, 1342, 1463, 1620
BslI	CCNNNNNNNGG	5 cut(s)	172, 384, 786, 1271, 1487
BsmAI	GTCTC	6 cut(s)	121, 195, 626, 670, 974, 1048
BsmBI	CGTCTC	2 cut(s)	626, 1048
BsmFI	GGGAC	9 cut(s)	189, 411, 575, 760, 1108, 1288, 1342, 1463, 1620
BsnI	GGCC	6 cut(s)	85, 165, 335, 790, 809, 1087
Bsp1286I	GDGCHC	2 cut(s)	320, 1067
Bsp13I	TCCGGA	1 cut(s)	554
Bsp143I	GATC	5 cut(s)	351, 406, 607, 919, 1450
Bsp19I	CCATGG	2 cut(s)	284, 421
BspACI	CCGC	3 cut(s)	810, 1211, 1247
BspANI	GGCC	6 cut(s)	85, 165, 335, 790, 809, 1087
BspCNI	CTCAG	2 cut(s)	666, 984
BspEI	TCCGGA	1 cut(s)	554
BspFNI	CGCG	2 cut(s)	1099, 1304
BspLI	GGNNCC	8 cut(s)	177, 334, 376, 427, 563, 564, 1428, 1608
BspMAI	CTGCAG	1 cut(s)	137
BspMI	ACCTGC	1 cut(s)	1276
BspOI	GCTAGC	1 cut(s)	759
BspPI	GGATC	2 cut(s)	414, 1445
BspT107I	GGYRCC	1 cut(s)	374
BsrDI	GCAATG	3 cut(s)	70, 1470, 1540
BsrI	ACTGG	4 cut(s)	166, 260, 1060, 1296
BssECI	CCNNGG	3 cut(s)	284, 329, 421
BssMI	GATC	5 cut(s)	351, 406, 607, 919, 1450
BssT1I	CCWWGG	2 cut(s)	284, 421
Bst2UI	CCWGG	3 cut(s)	330, 603, 1524
Bst4CI	ACNGT	8 cut(s)	157, 315, 398, 418, 739, 1042, 1309, 1379
Bst6I	CTCTTC	1 cut(s)	1464
BstAPI	GCANNNNNTGC	1 cut(s)	1243
BstBAI	YACGTR	2 cut(s)	805, 823
BstC8I	GCNNGC	3 cut(s)	87, 390, 757
BstDEI	CTNAG	2 cut(s)	674, 971
BstDSI	CCRYGG	2 cut(s)	284, 421
BstF5I	GGATG	2 cut(s)	1354, 1354
BstFNI	CGCG	2 cut(s)	1099, 1304
BstH2I	RGCGCY	1 cut(s)	834
BstHHI	GCGC	4 cut(s)	271, 833, 1082, 1237
BstKTI	GATC	5 cut(s)	354, 409, 610, 922, 1453
BstMAI	GTCTC	6 cut(s)	121, 195, 626, 670, 974, 1048
BstMBI	GATC	5 cut(s)	351, 406, 607, 919, 1450
BstMWI	GCNNNNNNNGC	3 cut(s)	86, 815, 1243
BstNI	CCWGG	3 cut(s)	330, 603, 1524
BstNSI	RCATGY	1 cut(s)	392
BstSCI	CCNGG	5 cut(s)	172, 328, 601, 1082, 1522
BstSFI	CTRYAG	2 cut(s)	133, 813
BstSLI	GKGCMC	2 cut(s)	320, 1067
BstSNI	TACGTA	1 cut(s)	823
BstUI	CGCG	2 cut(s)	1099, 1304
BstV1I	GCAGC	2 cut(s)	147, 1093
BstXI	CCANNNNNNTGG	1 cut(s)	260
BsuI	GTATCC	2 cut(s)	624, 1570
BsuRI	GGCC	6 cut(s)	85, 165, 335, 790, 809, 1087
BtgI	CCRYGG	2 cut(s)	284, 421
BtgZI	GCGATG	1 cut(s)	703
BtsCI	GGATG	2 cut(s)	1354, 1354
BtsIMutI	CAGTG	6 cut(s)	253, 320, 403, 1067, 1143, 1314
BveI	ACCTGC	1 cut(s)	1276
Cac8I	GCNNGC	3 cut(s)	87, 390, 757
CaiI	CAGNNNCTG	1 cut(s)	1291
CfoI	GCGC	4 cut(s)	271, 833, 1082, 1237
Cfr13I	GGNCC	8 cut(s)	176, 296, 333, 425, 562, 1085, 1426, 1607
CseI	GACGC	3 cut(s)	587, 1088, 1105
Csp6I	GTAC	5 cut(s)	820, 1240, 1252, 1289, 1297
CviQI	GTAC	5 cut(s)	820, 1240, 1252, 1289, 1297
DdeI	CTNAG	2 cut(s)	674, 971
DpnI	GATC	5 cut(s)	353, 408, 609, 921, 1452
DpnII	GATC	5 cut(s)	351, 406, 607, 919, 1450
DraIII	CACNNNGTG	1 cut(s)	315
EaeI	YGGCCR	3 cut(s)	83, 163, 807
Eam1104I	CTCTTC	1 cut(s)	1464
EarI	CTCTTC	1 cut(s)	1464
Eco105I	TACGTA	1 cut(s)	823
Eco130I	CCWWGG	2 cut(s)	284, 421
Eco147I	AGGCCT	1 cut(s)	790
Eco32I	GATATC	1 cut(s)	281
Eco47I	GGWCC	6 cut(s)	176, 296, 425, 562, 1426, 1607
Eco57I	CTGAAG	1 cut(s)	1241
EcoO109I	RGGNCCY	3 cut(s)	562, 1426, 1607
EcoRII	CCWGG	3 cut(s)	328, 601, 1522
EcoRV	GATATC	1 cut(s)	281
EcoT14I	CCWWGG	2 cut(s)	284, 421
EcoT22I	ATGCAT	3 cut(s)	949, 1365, 1542
ErhI	CCWWGG	2 cut(s)	284, 421
Esp3I	CGTCTC	2 cut(s)	626, 1048
FalI	AAGNNNNNCTT	4 cut(s)	134, 166, 363, 395
FaqI	GGGAC	9 cut(s)	189, 411, 575, 760, 1108, 1288, 1342, 1463, 1620
FauI	CCCGC	1 cut(s)	1218
FauNDI	CATATG	1 cut(s)	1560
Fnu4HI	GCNGC	4 cut(s)	136, 810, 1107, 1247
FokI	GGATG	2 cut(s)	1341, 1361
Fsp4HI	GCNGC	4 cut(s)	136, 810, 1107, 1247
FspBI	CTAG	3 cut(s)	756, 1110, 1140
FspI	TGCGCA	1 cut(s)	270
GlaI	GCGC	4 cut(s)	270, 832, 1081, 1236
GluI	GCNGC	4 cut(s)	136, 810, 1107, 1247
GsuI	CTGGAG	2 cut(s)	1313, 1545
HaeII	RGCGCY	1 cut(s)	834
HaeIII	GGCC	6 cut(s)	85, 165, 335, 790, 809, 1087
HapII	CCGG	4 cut(s)	173, 555, 690, 1083
HgaI	GACGC	3 cut(s)	587, 1088, 1105
HhaI	GCGC	4 cut(s)	271, 833, 1082, 1237
Hin6I	GCGC	4 cut(s)	269, 831, 1080, 1235
HinP1I	GCGC	4 cut(s)	269, 831, 1080, 1235
HincII	GTYRAC	3 cut(s)	599, 1051, 1177
HindII	GTYRAC	3 cut(s)	599, 1051, 1177
HindIII	AAGCTT	3 cut(s)	78, 530, 1158
HinfI	GANTC	3 cut(s)	129, 703, 1506
HpaII	CCGG	4 cut(s)	173, 555, 690, 1083
HphI	GGTGA	1 cut(s)	334
Hpy166II	GTNNAC	6 cut(s)	342, 599, 1051, 1135, 1177, 1494
Hpy188I	TCNGA	5 cut(s)	292, 577, 631, 1260, 1505
Hpy188III	TCNNGA	8 cut(s)	12, 151, 361, 555, 640, 917, 973, 1550
Hpy8I	GTNNAC	6 cut(s)	342, 599, 1051, 1135, 1177, 1494
Hpy99I	CGWCG	2 cut(s)	218, 581
HpyAV	CCTTC	5 cut(s)	358, 365, 508, 906, 1265
HpyCH4III	ACNGT	8 cut(s)	157, 315, 398, 418, 739, 1042, 1309, 1379
HpyCH4IV	ACGT	5 cut(s)	635, 804, 822, 1005, 1055
HpyCH4V	TGCA	8 cut(s)	25, 135, 482, 697, 947, 1285, 1363, 1540
HpyF10VI	GCNNNNNNNGC	3 cut(s)	86, 815, 1243
HpyF3I	CTNAG	2 cut(s)	674, 971
HpySE526I	ACGT	5 cut(s)	635, 804, 822, 1005, 1055
HspAI	GCGC	4 cut(s)	269, 831, 1080, 1235
KflI	GGGWCCC	1 cut(s)	562
Kpn2I	TCCGGA	1 cut(s)	554
Kzo9I	GATC	5 cut(s)	351, 406, 607, 919, 1450
LmnI	GCTCC	2 cut(s)	975, 1312
Lsp1109I	GCAGC	2 cut(s)	147, 1093
LweI	GCATC	4 cut(s)	34, 742, 956, 1372
MaeI	CTAG	3 cut(s)	756, 1110, 1140
MaeII	ACGT	5 cut(s)	635, 804, 822, 1005, 1055
MaeIII	GTNAC	5 cut(s)	92, 239, 733, 887, 1373
MalI	GATC	5 cut(s)	353, 408, 609, 921, 1452
MboI	GATC	5 cut(s)	351, 406, 607, 919, 1450
MboII	GAAGA	4 cut(s)	891, 914, 1358, 1451
MhlI	GDGCHC	2 cut(s)	320, 1067
MlsI	TGGCCA	2 cut(s)	85, 165
MluCI	AATT	8 cut(s)	15, 321, 486, 681, 1017, 1072, 1184, 1333
MluI	ACGCGT	1 cut(s)	1097
MluNI	TGGCCA	2 cut(s)	85, 165
MlyI	GAGTC	1 cut(s)	123
MmeI	TCCRAC	3 cut(s)	270, 600, 1372
Mox20I	TGGCCA	2 cut(s)	85, 165
Mph1103I	ATGCAT	3 cut(s)	949, 1365, 1542
MroI	TCCGGA	1 cut(s)	554
MscI	TGGCCA	2 cut(s)	85, 165
MseI	TTAA	4 cut(s)	57, 225, 684, 1224
MslI	CAYNNNNRTG	4 cut(s)	101, 258, 960, 1368
Msp20I	TGGCCA	2 cut(s)	85, 165
MspA1I	CMGCKG	1 cut(s)	1249
MspI	CCGG	4 cut(s)	173, 555, 690, 1083
MspR9I	CCNGG	5 cut(s)	174, 330, 603, 1084, 1524
MvaI	CCWGG	3 cut(s)	330, 603, 1524
MvnI	CGCG	2 cut(s)	1099, 1304
MwoI	GCNNNNNNNGC	3 cut(s)	86, 815, 1243
NciI	CCSGG	2 cut(s)	174, 1084
NcoI	CCATGG	2 cut(s)	284, 421
NdeI	CATATG	1 cut(s)	1560
NdeII	GATC	5 cut(s)	351, 406, 607, 919, 1450
NheI	GCTAGC	1 cut(s)	755
NlaIV	GGNNCC	8 cut(s)	177, 334, 376, 427, 563, 564, 1428, 1608
NmuCI	GTSAC	1 cut(s)	733
NsbI	TGCGCA	1 cut(s)	270
NsiI	ATGCAT	3 cut(s)	949, 1365, 1542
NspI	RCATGY	1 cut(s)	392
OliI	CACNNNNGTG	1 cut(s)	101
PaeI	GCATGC	1 cut(s)	392
PceI	AGGCCT	1 cut(s)	790
PfeI	GAWTC	2 cut(s)	703, 1506
Pfl23II	CGTACG	1 cut(s)	819
PfoI	TCCNGGA	2 cut(s)	172, 1522
PkrI	GCNGC	4 cut(s)	137, 811, 1108, 1248
PleI	GAGTC	1 cut(s)	123
PpsI	GAGTC	1 cut(s)	123
Ppu21I	YACGTR	2 cut(s)	805, 823
PpuMI	RGGWCCY	3 cut(s)	562, 1426, 1607
Psp5II	RGGWCCY	3 cut(s)	562, 1426, 1607
Psp6I	CCWGG	3 cut(s)	328, 601, 1522
PspGI	CCWGG	3 cut(s)	328, 601, 1522
PspLI	CGTACG	1 cut(s)	819
PspN4I	GGNNCC	8 cut(s)	177, 334, 376, 427, 563, 564, 1428, 1608
PspPI	GGNCC	8 cut(s)	176, 296, 333, 425, 562, 1085, 1426, 1607
PspPPI	RGGWCCY	3 cut(s)	562, 1426, 1607
PsrI	GAACNNNNNNTAC	2 cut(s)	443, 475
PstI	CTGCAG	1 cut(s)	137
PstNI	CAGNNNCTG	1 cut(s)	1291
RsaI	GTAC	5 cut(s)	821, 1241, 1253, 1290, 1298
RsaNI	GTAC	5 cut(s)	820, 1240, 1252, 1289, 1297
RseI	CAYNNNNRTG	4 cut(s)	101, 258, 960, 1368
SaqAI	TTAA	4 cut(s)	57, 225, 684, 1224
SatI	GCNGC	4 cut(s)	136, 810, 1107, 1247
Sau3AI	GATC	5 cut(s)	351, 406, 607, 919, 1450
Sau96I	GGNCC	8 cut(s)	176, 296, 333, 425, 562, 1085, 1426, 1607
ScaI	AGTACT	1 cut(s)	1241
SchI	GAGTC	1 cut(s)	123
ScrFI	CCNGG	5 cut(s)	174, 330, 603, 1084, 1524
SduI	GDGCHC	2 cut(s)	320, 1067
SfaNI	GCATC	4 cut(s)	34, 742, 956, 1372
SfcI	CTRYAG	2 cut(s)	133, 813
SinI	GGWCC	6 cut(s)	176, 296, 425, 562, 1426, 1607
SmiMI	CAYNNNNRTG	4 cut(s)	101, 258, 960, 1368
SnaBI	TACGTA	1 cut(s)	823
SphI	GCATGC	1 cut(s)	392
Sse9I	AATT	8 cut(s)	15, 321, 486, 681, 1017, 1072, 1184, 1333
SseBI	AGGCCT	1 cut(s)	790
SsiI	CCGC	3 cut(s)	810, 1211, 1247
SspMI	CTAG	3 cut(s)	756, 1110, 1140
StuI	AGGCCT	1 cut(s)	790
StyD4I	CCNGG	5 cut(s)	172, 328, 601, 1082, 1522
StyI	CCWWGG	2 cut(s)	284, 421
TaaI	ACNGT	8 cut(s)	157, 315, 398, 418, 739, 1042, 1309, 1379
TaiI	ACGT	5 cut(s)	638, 807, 825, 1008, 1058
TaqI	TCGA	2 cut(s)	216, 362
TaqII	GACCGA	1 cut(s)	193
TasI	AATT	8 cut(s)	15, 321, 486, 681, 1017, 1072, 1184, 1333
TatI	WGTACW	2 cut(s)	1239, 1296
TauI	GCSGC	2 cut(s)	812, 1249
TfiI	GAWTC	2 cut(s)	703, 1506
Tru1I	TTAA	4 cut(s)	57, 225, 684, 1224
Tru9I	TTAA	4 cut(s)	57, 225, 684, 1224
TscAI	CASTG	6 cut(s)	260, 320, 403, 1067, 1150, 1314
TseFI	GTSAC	1 cut(s)	733
TseI	GCWGC	2 cut(s)	135, 1106
Tsp45I	GTSAC	1 cut(s)	733
TspDTI	ATGAA	5 cut(s)	17, 944, 1065, 1358, 1576
TspGWI	ACGGA	3 cut(s)	309, 1036, 1292
TspRI	CASTG	6 cut(s)	260, 320, 403, 1067, 1150, 1314
VpaK11BI	GGWCC	6 cut(s)	176, 296, 425, 562, 1426, 1607
XapI	RAATTY	1 cut(s)	486
XceI	RCATGY	1 cut(s)	392
XcmI	CCANNNNNNNNNTGG	1 cut(s)	282
XspI	CTAG	3 cut(s)	756, 1110, 1140
ZrmI	AGTACT	1 cut(s)	1241
Zsp2I	ATGCAT	3 cut(s)	949, 1365, 1542

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.