Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Reverse (-)

19587910 .. 19590360

Gene Structure 2451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG211800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGTGGTCTGCTAAGAAGTGGAAATCAGCACTTCAGGCTTTATCATTTCTACTAGTACTCTTCCTTCATCGCCAAGCTTCAGCCGATTATAATTGGGTCGTGAAAGAATCCACATATACAAGGCTGTGCAGCACTAAGTCAATATTGACAGTTAATGGAAAATTTCCGGGACCAGTTTTAAGAGCTTATAAAGGAGATACAGTCTATGTCAATGTTCATAACAGAGGCAGATACAATATCACTATTCACTGGCATGGAGTCAAGCAACCGAGGAATCCATGGTCTGATGGTCCTGAATACATCACCCAATGTGGTATTCAACCGGGTGGGAGTTTCAGGCAGAAGATCATATTCTCTATTGAGGAAGGAACCCTTTGGTGGCACGCTCATAGTGATTGGTCCCGGGCGACGGTTCATGGAGCAATTTTTGTCTATCCAAAACCAGGAACTAGCTACCCTTTTCCCAAGCCCCATGCTGAAGTTCCCATAATATTAGGTCAATGGTGGAAAAGTGATGTAATGGAGGTACTTGATGAATTTGTTAGAACCGGAGGAACTCCCAATGTTTCTGATGCTTACACCATCAATGGTCAACCAGGAGACCTCTATCCTTGCTCAAAATCAGAAACATTCAAACTTTCTGTGGAACAAAACAAGACCCATCTGCTCCGAGTAATCAACGCTGCCATGAACAGCATCCTTTTCTTCTCAGTCGCAAACCATAACCTGACGGTGGTCGCAGCAGACGCAGCCTACACCGCGCCAATCTCAACACCCTACATCACAATATCTCCTGGACAAACCGTTGATGCCCTGTTGTTCACAGACCAACAACCTGGTCGTTATTACATGGCTGCTAGGGCATACCAAGGTAACCTAGCGATTGGTTTTGACAACACCACAACCACATCAATAGTTGAATACAGAGATGGCAATGGAAATAGTAAAACTGCTCCATTATCAATAATTGAATACAGAGATGGCAGTGGAAATGGTAAAACTGCTCCATTATCAATTATTGAATACAAAGATGGCAGTGGAAATGGTAAAACTGCTCCATTATTTCCCTACCTTCCTTACTATAACAACACGAATGCAGCCTTTGGCTTTTTCAATAGCCTTAAAAGCCTAGACATTAACCAAACCGATGTCGTAAAAACCACCACCACTCGAATAGTTTCAACAGTATCGGTGAACACACTCCCTTGCCTTGGAAATCAAACCTGTGAAGGACCCAATGGGACGCGATTAGCTGCCAGTATGAACAACATAAGCTTTGTGGATCCGAGAGTAGATATATTACAAGCTTACTATTACTATATCAAAGGGGTTTATAAAGAGGGTTTCCCAGATTTTCCACCGTTGATTTTTAACTTCACAGCTGAGGACTTCCCTCTGATATTGGAAATACCGGAGACGGACACAAAGGTGAAGGTTTTGGAATATGGATCGGATGTGGAAATTGTTTTTCAAAACACAAATTTAGTGGCTGGGATAGATCATCCCATGCATCTTCATGGCTATAGCTTCCACATTGTTGGAACTGGCTTTGGGAATTTTGATGTAAAAAAGGACCCATTGAGCTTCAATCTTGTTGATCCTCCTCTTAGGAACACAGTTACTGTGCCCTTAAGTGGATGGGCCGCTGTCAGATTCAAGGCCAGAAATCCTGGAGTGTGGTATTTACACTGTCATCTTGAACGTCACCTATCATGGGGAATGCACACCGTCTTGATCGTAAAGAATGGAAAACACCCAAATGAAACGTTGCTGCCTCCGCCACTAGACATGCCGCCGTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

600

Amino Acids

66.86

Weight (kDa)

8.02

Isoelectric Point (pI)

25.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	34 - 147	7e-38	Multicopper oxidase
Cu-oxidase	PF00394	160 - 309	3.9e-39	Multicopper oxidase
Cu-oxidase_2	PF07731	470 - 583	1.5e-38	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	90, 189, 1335
AccII	CGCG	2 cut(s)	761, 1246
AciI	CCGC	4 cut(s)	759, 1644, 1778, 1793
AclI	AACGTT	1 cut(s)	1766
AclWI	GGATC	4 cut(s)	1277, 1290, 1456, 1592
AcsI	RAATTY	4 cut(s)	161, 536, 1480, 1555
AcuI	CTGAAG	3 cut(s)	17, 63, 498
AfaI	GTAC	2 cut(s)	57, 528
AfiI	CCNNNNNNNGG	7 cut(s)	378, 409, 443, 733, 1211, 1634, 1714
AflII	CTTAAG	1 cut(s)	1630
AhlI	ACTAGT	1 cut(s)	52
AjnI	CCWGG	5 cut(s)	442, 595, 793, 835, 1669
AjuI	GAANNNNNNNTTGG	2 cut(s)	300, 332
AleI	CACNNNNGTG	1 cut(s)	1427
AluBI	AGCT	9 cut(s)	77, 185, 453, 1253, 1275, 1307, 1382, 1527, 1584
AluI	AGCT	9 cut(s)	77, 185, 453, 1253, 1275, 1307, 1382, 1527, 1584
Alw26I	GTCTC	2 cut(s)	594, 1409
AlwI	GGATC	4 cut(s)	1277, 1290, 1456, 1592
AlwNI	CAGNNNCTG	1 cut(s)	1622
Ama87I	CYCGRG	1 cut(s)	402
AoxI	GGCC	2 cut(s)	1641, 1659
ApeKI	GCWGC	8 cut(s)	129, 683, 740, 749, 854, 1097, 1253, 1771
ApoI	RAATTY	4 cut(s)	161, 536, 1480, 1555
Asp700I	GAANNNNTTC	1 cut(s)	1177
AspLEI	GCGC	1 cut(s)	763
AspS9I	GGNCC	6 cut(s)	170, 290, 399, 1232, 1573, 1641
AsuC2I	CCSGG	4 cut(s)	168, 324, 403, 404
AsuHPI	GGTGA	4 cut(s)	295, 1204, 1441, 1697
AvaI	CYCGRG	1 cut(s)	402
AvaII	GGWCC	5 cut(s)	170, 290, 399, 1232, 1573
BaeGI	GKGCMC	1 cut(s)	1629
BamHI	GGATCC	1 cut(s)	1282
BarI	GAAGNNNNNNTAC	2 cut(s)	48, 80
BbvCI	CCTCAGC	1 cut(s)	1383
BbvI	GCAGC	8 cut(s)	141, 670, 752, 761, 841, 1109, 1240, 1758
BccI	CCATC	7 cut(s)	281, 590, 669, 923, 974, 1025, 1632
BceAI	ACGGC	1 cut(s)	1780
BciT130I	CCWGG	5 cut(s)	444, 597, 795, 837, 1671
BcnI	CCSGG	4 cut(s)	168, 324, 403, 404
BcoDI	GTCTC	2 cut(s)	594, 1409
BcuI	ACTAGT	1 cut(s)	52
BfaI	CTAG	6 cut(s)	53, 450, 858, 878, 1130, 1784
BfmI	CTRYAG	1 cut(s)	1522
BfrI	CTTAAG	1 cut(s)	1630
BmcAI	AGTACT	1 cut(s)	57
Bme1390I	CCNGG	9 cut(s)	168, 324, 403, 404, 444, 597, 795, 837, 1671
Bme18I	GGWCC	5 cut(s)	170, 290, 399, 1232, 1573
BmeT110I	CYCGRG	1 cut(s)	402
BmgT120I	GGNCC	6 cut(s)	170, 290, 399, 1232, 1573, 1641
BmiI	GGNNCC	6 cut(s)	171, 370, 401, 1234, 1284, 1575
BmrFI	CCNGG	9 cut(s)	168, 324, 403, 404, 444, 597, 795, 837, 1671
BmsI	GCATC	4 cut(s)	562, 705, 799, 1519
BoxI	GACNNNNGTC	1 cut(s)	734
BpmI	CTGGAG	1 cut(s)	1692
Bpu10I	CCTNAGC	1 cut(s)	1383
BpuMI	CCSGG	4 cut(s)	168, 324, 403, 404
BsaI	GGTCTC	1 cut(s)	594
BsaJI	CCNNGG	5 cut(s)	269, 278, 402, 868, 1210
BsaWI	WCCGGW	2 cut(s)	548, 1411
BsaXI	ACNNNNNCTCC	4 cut(s)	186, 216, 775, 805
Bsc4I	CCNNNNNNNGG	7 cut(s)	378, 409, 443, 733, 1211, 1634, 1714
Bse1I	ACTGG	4 cut(s)	173, 254, 1257, 1549
Bse3DI	GCAATG	1 cut(s)	940
BseBI	CCWGG	5 cut(s)	444, 597, 795, 837, 1671
BseDI	CCNNGG	5 cut(s)	269, 278, 402, 868, 1210
BseGI	GGATG	4 cut(s)	696, 1459, 1501, 1643
BseLI	CCNNNNNNNGG	7 cut(s)	378, 409, 443, 733, 1211, 1634, 1714
BseMI	GCAATG	1 cut(s)	940
BseMII	CTCAG	2 cut(s)	723, 1374
BseNI	ACTGG	4 cut(s)	173, 254, 1257, 1549
BseRI	GAGGAG	1 cut(s)	1593
BseSI	GKGCMC	1 cut(s)	1629
BseXI	GCAGC	8 cut(s)	141, 670, 752, 761, 841, 1109, 1240, 1758
BseYI	CCCAGC	1 cut(s)	1490
BsgI	GTGCAG	1 cut(s)	148
Bsh1236I	CGCG	2 cut(s)	761, 1246
BshFI	GGCC	2 cut(s)	1643, 1661
BsiHKCI	CYCGRG	1 cut(s)	402
BsiSI	CCGG	5 cut(s)	167, 323, 403, 549, 1412
BslFI	GGGAC	3 cut(s)	183, 385, 1255
BslI	CCNNNNNNNGG	7 cut(s)	378, 409, 443, 733, 1211, 1634, 1714
BsmAI	GTCTC	2 cut(s)	594, 1409
BsmBI	CGTCTC	1 cut(s)	1409
BsmFI	GGGAC	3 cut(s)	183, 385, 1255
BsmI	GAATGC	2 cut(s)	1099, 1725
BsnI	GGCC	2 cut(s)	1643, 1661
Bso31I	GGTCTC	1 cut(s)	594
BsoBI	CYCGRG	1 cut(s)	402
Bsp1286I	GDGCHC	1 cut(s)	1629
Bsp143I	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
Bsp19I	CCATGG	1 cut(s)	278
BspACI	CCGC	4 cut(s)	759, 1644, 1778, 1793
BspANI	GGCC	2 cut(s)	1643, 1661
BspCNI	CTCAG	2 cut(s)	722, 1375
BspFNI	CGCG	2 cut(s)	761, 1246
BspLI	GGNNCC	6 cut(s)	171, 370, 401, 1234, 1284, 1575
BspPI	GGATC	4 cut(s)	1277, 1290, 1456, 1592
BspTI	CTTAAG	1 cut(s)	1630
BspTNI	GGTCTC	1 cut(s)	594
BsrDI	GCAATG	1 cut(s)	940
BsrI	ACTGG	4 cut(s)	173, 254, 1257, 1549
BssECI	CCNNGG	5 cut(s)	269, 278, 402, 868, 1210
BssMI	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
BssT1I	CCWWGG	3 cut(s)	278, 868, 1210
Bst2UI	CCWGG	5 cut(s)	444, 597, 795, 837, 1671
Bst6I	CTCTTC	1 cut(s)	65
BstAFI	CTTAAG	1 cut(s)	1630
BstC8I	GCNNGC	1 cut(s)	384
BstDEI	CTNAG	5 cut(s)	12, 135, 709, 1383, 1607
BstDSI	CCRYGG	1 cut(s)	278
BstEII	GGTNACC	1 cut(s)	872
BstF5I	GGATG	4 cut(s)	696, 1459, 1501, 1643
BstFNI	CGCG	2 cut(s)	761, 1246
BstHHI	GCGC	1 cut(s)	763
BstKTI	GATC	6 cut(s)	348, 1285, 1451, 1501, 1600, 1737
BstMAI	GTCTC	2 cut(s)	594, 1409
BstMBI	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
BstMWI	GCNNNNNNNGC	7 cut(s)	35, 746, 749, 758, 860, 1125, 1777
BstNI	CCWGG	5 cut(s)	444, 597, 795, 837, 1671
BstNSI	RCATGY	1 cut(s)	1792
BstPAI	GACNNNNGTC	1 cut(s)	734
BstPI	GGTNACC	1 cut(s)	872
BstSCI	CCNGG	9 cut(s)	166, 322, 401, 402, 442, 595, 793, 835, 1669
BstSFI	CTRYAG	1 cut(s)	1522
BstSLI	GKGCMC	1 cut(s)	1629
BstUI	CGCG	2 cut(s)	761, 1246
BstV1I	GCAGC	8 cut(s)	141, 670, 752, 761, 841, 1109, 1240, 1758
BstX2I	RGATCY	1 cut(s)	1282
BstXI	CCANNNNNNTGG	2 cut(s)	836, 1538
BstYI	RGATCY	1 cut(s)	1282
BsuRI	GGCC	2 cut(s)	1643, 1661
BtgI	CCRYGG	1 cut(s)	278
BtgZI	GCGATG	1 cut(s)	53
BtsCI	GGATG	4 cut(s)	696, 1459, 1501, 1643
BtsI	GCAGTG	2 cut(s)	991, 1042
BtsIMutI	CAGTG	4 cut(s)	247, 991, 1042, 1687
Cac8I	GCNNGC	1 cut(s)	384
CaiI	CAGNNNCTG	1 cut(s)	1622
CfoI	GCGC	1 cut(s)	763
Cfr13I	GGNCC	6 cut(s)	170, 290, 399, 1232, 1573, 1641
Cfr9I	CCCGGG	1 cut(s)	402
CseI	GACGC	2 cut(s)	755, 1252
CsiI	ACCWGGT	1 cut(s)	835
Csp6I	GTAC	2 cut(s)	56, 527
CspCI	CAANNNNNGTGG	2 cut(s)	1467, 1502
CviQI	GTAC	2 cut(s)	56, 527
DdeI	CTNAG	5 cut(s)	12, 135, 709, 1383, 1607
DpnI	GATC	6 cut(s)	347, 1284, 1450, 1500, 1599, 1736
DpnII	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
Eam1104I	CTCTTC	1 cut(s)	65
EarI	CTCTTC	1 cut(s)	65
EciI	GGCGGA	1 cut(s)	1767
Eco130I	CCWWGG	3 cut(s)	278, 868, 1210
Eco31I	GGTCTC	1 cut(s)	594
Eco47I	GGWCC	5 cut(s)	170, 290, 399, 1232, 1573
Eco57I	CTGAAG	3 cut(s)	17, 63, 498
Eco88I	CYCGRG	1 cut(s)	402
Eco91I	GGTNACC	1 cut(s)	872
EcoO109I	RGGNCCY	2 cut(s)	1232, 1573
EcoO65I	GGTNACC	1 cut(s)	872
EcoRII	CCWGG	5 cut(s)	442, 595, 793, 835, 1669
EcoT14I	CCWWGG	3 cut(s)	278, 868, 1210
EcoT22I	ATGCAT	1 cut(s)	1512
ErhI	CCWWGG	3 cut(s)	278, 868, 1210
Esp3I	CGTCTC	1 cut(s)	1409
FalI	AAGNNNNNCTT	2 cut(s)	357, 389
FaqI	GGGAC	3 cut(s)	183, 385, 1255
FokI	GGATG	4 cut(s)	683, 1466, 1488, 1650
FspBI	CTAG	6 cut(s)	53, 450, 858, 878, 1130, 1784
GlaI	GCGC	1 cut(s)	762
GsaI	CCCAGC	1 cut(s)	1494
GsuI	CTGGAG	1 cut(s)	1692
HaeIII	GGCC	2 cut(s)	1643, 1661
HapII	CCGG	5 cut(s)	167, 323, 403, 549, 1412
HgaI	GACGC	2 cut(s)	755, 1252
HhaI	GCGC	1 cut(s)	763
Hin6I	GCGC	1 cut(s)	761
HinP1I	GCGC	1 cut(s)	761
HincII	GTYRAC	1 cut(s)	593
HindII	GTYRAC	1 cut(s)	593
HindIII	AAGCTT	3 cut(s)	75, 1273, 1305
HinfI	GANTC	4 cut(s)	107, 258, 274, 1653
HpaII	CCGG	5 cut(s)	167, 323, 403, 549, 1412
HphI	GGTGA	4 cut(s)	295, 1204, 1441, 1697
Hpy166II	GTNNAC	3 cut(s)	593, 822, 1195
Hpy188I	TCNGA	8 cut(s)	286, 571, 625, 671, 1287, 1398, 1453, 1652
Hpy188III	TCNNGA	4 cut(s)	100, 293, 1697, 1732
Hpy8I	GTNNAC	3 cut(s)	593, 822, 1195
Hpy99I	CGWCG	1 cut(s)	412
HpyAV	CCTTC	5 cut(s)	74, 359, 1082, 1223, 1426
HpyCH4IV	ACGT	2 cut(s)	1702, 1766
HpyCH4V	TGCA	4 cut(s)	129, 1097, 1510, 1723
HpyF10VI	GCNNNNNNNGC	7 cut(s)	35, 746, 749, 758, 860, 1125, 1777
HpyF3I	CTNAG	5 cut(s)	12, 135, 709, 1383, 1607
HpySE526I	ACGT	2 cut(s)	1702, 1766
HspAI	GCGC	1 cut(s)	761
Kzo9I	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
LmnI	GCTCC	5 cut(s)	419, 672, 958, 1009, 1060
Lsp1109I	GCAGC	8 cut(s)	141, 670, 752, 761, 841, 1109, 1240, 1758
LweI	GCATC	4 cut(s)	562, 705, 799, 1519
MabI	ACCWGGT	1 cut(s)	835
MaeI	CTAG	6 cut(s)	53, 450, 858, 878, 1130, 1784
MaeII	ACGT	2 cut(s)	1702, 1766
MaeIII	GTNAC	3 cut(s)	872, 1618, 1703
MalI	GATC	6 cut(s)	347, 1284, 1450, 1500, 1599, 1736
MboI	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
MboII	GAAGA	4 cut(s)	52, 355, 697, 1505
MflI	RGATCY	1 cut(s)	1282
MhlI	GDGCHC	1 cut(s)	1629
MluCI	AATT	9 cut(s)	91, 161, 423, 536, 966, 1014, 1461, 1480, 1555
MlyI	GAGTC	1 cut(s)	267
MmeI	TCCRAC	1 cut(s)	1519
Mph1103I	ATGCAT	1 cut(s)	1512
MroXI	GAANNNNTTC	1 cut(s)	1177
MseI	TTAA	6 cut(s)	153, 179, 1122, 1137, 1371, 1631
MslI	CAYNNNNRTG	4 cut(s)	252, 1427, 1515, 1758
MspA1I	CMGCKG	2 cut(s)	1382, 1646
MspCI	CTTAAG	1 cut(s)	1630
MspI	CCGG	5 cut(s)	167, 323, 403, 549, 1412
MspR9I	CCNGG	9 cut(s)	168, 324, 403, 404, 444, 597, 795, 837, 1671
Mva1269I	GAATGC	2 cut(s)	1099, 1725
MvaI	CCWGG	5 cut(s)	444, 597, 795, 837, 1671
MvnI	CGCG	2 cut(s)	761, 1246
MwoI	GCNNNNNNNGC	7 cut(s)	35, 746, 749, 758, 860, 1125, 1777
NciI	CCSGG	4 cut(s)	168, 324, 403, 404
NcoI	CCATGG	1 cut(s)	278
NdeII	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
NlaIV	GGNNCC	6 cut(s)	171, 370, 401, 1234, 1284, 1575
NmuCI	GTSAC	1 cut(s)	1703
NsiI	ATGCAT	1 cut(s)	1512
NspI	RCATGY	1 cut(s)	1792
OliI	CACNNNNGTG	1 cut(s)	1427
PctI	GAATGC	2 cut(s)	1099, 1725
PdmI	GAANNNNTTC	1 cut(s)	1177
PfeI	GAWTC	3 cut(s)	107, 274, 1653
PfoI	TCCNGGA	3 cut(s)	166, 793, 1669
PleI	GAGTC	1 cut(s)	266
PpsI	GAGTC	1 cut(s)	266
PpuMI	RGGWCCY	2 cut(s)	1232, 1573
PshAI	GACNNNNGTC	1 cut(s)	734
PsiI	TTATAA	3 cut(s)	90, 189, 1335
Psp1406I	AACGTT	1 cut(s)	1766
Psp5II	RGGWCCY	2 cut(s)	1232, 1573
Psp6I	CCWGG	5 cut(s)	442, 595, 793, 835, 1669
PspEI	GGTNACC	1 cut(s)	872
PspFI	CCCAGC	1 cut(s)	1490
PspGI	CCWGG	5 cut(s)	442, 595, 793, 835, 1669
PspN4I	GGNNCC	6 cut(s)	171, 370, 401, 1234, 1284, 1575
PspPI	GGNCC	6 cut(s)	170, 290, 399, 1232, 1573, 1641
PspPPI	RGGWCCY	2 cut(s)	1232, 1573
PstNI	CAGNNNCTG	1 cut(s)	1622
PsuI	RGATCY	1 cut(s)	1282
PvuII	CAGCTG	1 cut(s)	1382
RsaI	GTAC	2 cut(s)	57, 528
RsaNI	GTAC	2 cut(s)	56, 527
RseI	CAYNNNNRTG	4 cut(s)	252, 1427, 1515, 1758
SaqAI	TTAA	6 cut(s)	153, 179, 1122, 1137, 1371, 1631
Sau3AI	GATC	6 cut(s)	345, 1282, 1448, 1498, 1597, 1734
Sau96I	GGNCC	6 cut(s)	170, 290, 399, 1232, 1573, 1641
ScaI	AGTACT	1 cut(s)	57
SchI	GAGTC	1 cut(s)	267
ScrFI	CCNGG	9 cut(s)	168, 324, 403, 404, 444, 597, 795, 837, 1671
SduI	GDGCHC	1 cut(s)	1629
SexAI	ACCWGGT	1 cut(s)	835
SfaNI	GCATC	4 cut(s)	562, 705, 799, 1519
SfcI	CTRYAG	1 cut(s)	1522
SinI	GGWCC	5 cut(s)	170, 290, 399, 1232, 1573
SmaI	CCCGGG	1 cut(s)	404
SmiMI	CAYNNNNRTG	4 cut(s)	252, 1427, 1515, 1758
SmlI	CTYRAG	1 cut(s)	1630
SmoI	CTYRAG	1 cut(s)	1630
SpeI	ACTAGT	1 cut(s)	52
Sse9I	AATT	9 cut(s)	91, 161, 423, 536, 966, 1014, 1461, 1480, 1555
SsiI	CCGC	4 cut(s)	759, 1644, 1778, 1793
SspI	AATATT	2 cut(s)	144, 492
SspMI	CTAG	6 cut(s)	53, 450, 858, 878, 1130, 1784
StyD4I	CCNGG	9 cut(s)	166, 322, 401, 402, 442, 595, 793, 835, 1669
StyI	CCWWGG	3 cut(s)	278, 868, 1210
TaiI	ACGT	2 cut(s)	1705, 1769
TaqI	TCGA	1 cut(s)	1171
TasI	AATT	9 cut(s)	91, 161, 423, 536, 966, 1014, 1461, 1480, 1555
TatI	WGTACW	1 cut(s)	55
TauI	GCSGC	2 cut(s)	1646, 1795
TfiI	GAWTC	3 cut(s)	107, 274, 1653
Tru1I	TTAA	6 cut(s)	153, 179, 1122, 1137, 1371, 1631
Tru9I	TTAA	6 cut(s)	153, 179, 1122, 1137, 1371, 1631
TscAI	CASTG	4 cut(s)	254, 991, 1042, 1694
TseFI	GTSAC	1 cut(s)	1703
TseI	GCWGC	8 cut(s)	129, 683, 740, 749, 854, 1097, 1253, 1771
Tsp45I	GTSAC	1 cut(s)	1703
TspDTI	ATGAA	8 cut(s)	56, 206, 404, 549, 704, 1277, 1505, 1776
TspGWI	ACGGA	1 cut(s)	1433
TspMI	CCCGGG	1 cut(s)	402
TspRI	CASTG	4 cut(s)	254, 991, 1042, 1694
Vha464I	CTTAAG	1 cut(s)	1630
VpaK11BI	GGWCC	5 cut(s)	170, 290, 399, 1232, 1573
XapI	RAATTY	4 cut(s)	161, 536, 1480, 1555
XceI	RCATGY	1 cut(s)	1792
XmaI	CCCGGG	1 cut(s)	402
XmnI	GAANNNNTTC	1 cut(s)	1177
XspI	CTAG	6 cut(s)	53, 450, 858, 878, 1130, 1784
ZrmI	AGTACT	1 cut(s)	57
Zsp2I	ATGCAT	1 cut(s)	1512

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.