Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000079.1

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Forward (+)

184821 .. 186611

Gene Structure 1791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000079.1_g000043.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

atgagcaggcatggtgttgcgcaaccaagaaatccatggtcggacggaccagagtatatcacacagtgcccaattcagccgggagccaagttcacccaaaagatcattttctcaaaggaggaaggcaccctttggtggcatgctcacagtgagtgggatcgagccactgtccacggtcccatcatcatataccccaacaagaagaagaattacccttttggcaagcctcatgcagaaattccaatcatattgggagagtggtggaaggtagatatagggaacctttatactcaaactcttcaagccggaggggaacctaatacttccgacgcttatctcatcaatggtcaacctggcgatctgtatccatgctctaaatcagagacgttcaaggtgatggttgattatggcaaaacctacctactgagactaatcaactccggtctgcaagagattctgtttttcgccatcgccaatcacaaagtcacagtcgtaggaacagatgctagctacaccaagcctttcacaacggattatgtcaccatctcacctggtcaaaccattgaccttttgctccatgctaatcagaggcctaaccactactacatggccgctacagcctacgtaggtggcgctgttccttatgataacaccaccaccacagtcctactacaatacaagaatcggggttacaccccttcttcaacccctttctttcctaatcttcctgctcacaatgacactaatgcatcagttcattttagtggtagtctcaggagcttggctgataaaaaccatcccattgacgttccactaaaaattacaactcccttgttttataccgtctccgtcaacacgttccagtgccccaataattcatgtgctgggcctaacgggacgcgtctggccgctagtgtaaacaacattagctttgtgaaccctagcattgacatactacaagcttactattaccatttcaacggggtatttggaactcggtttccagatttcccgccttttctgtttaactttacagcacagtacttgccgctgtaccttcagaccccaaaacgagggacagaggtgcaggtactggagtacaacgcgacagtggagcttgtgtttcaggggactaatttggtggcaggggatgaccatccaatgcatcttcatggttacagtttctatgtggttggattggggcttgggaactttgacaaggataaggaccctttgaaatacaatcttgttgatcctcctcttcaaaacaccattgctgtccctgtaaatgggtggacgaccatcagattcaaggctgacaatcctggagtttggtttatgcattgccatctggataggcatatgtcatgggggatggatacgacatttatagtaaaaaatggaaagggacctaaagctcaaatcttacctccaccaccagatatgccaccttgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

485

Amino Acids

54.25

Weight (kDa)

7.01

Isoelectric Point (pI)

33.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	21
Acc36I	ACCTGC	1 cut(s)	1078
AccB1I	GGYRCC	1 cut(s)	125
AccII	CGCG	2 cut(s)	901, 1106
AciI	CCGC	4 cut(s)	612, 909, 1013, 1049
AclWI	GGATC	2 cut(s)	165, 1247
AcoI	YGGCCR	2 cut(s)	609, 906
AcsI	RAATTY	1 cut(s)	237
AcuI	CTGAAG	1 cut(s)	1043
AdeI	CACNNNGTG	1 cut(s)	66
AfaI	GTAC	4 cut(s)	1043, 1055, 1092, 1100
AfiI	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
AflIII	ACRYGT	2 cut(s)	855, 899
AgsI	TTSAA	7 cut(s)	302, 391, 705, 979, 1237, 1265, 1312
AjnI	CCWGG	3 cut(s)	352, 550, 1324
AloI	GAACNNNNNNTCC	2 cut(s)	985, 1017
AluBI	AGCT	6 cut(s)	510, 780, 930, 962, 1117, 1418
AluI	AGCT	6 cut(s)	510, 780, 930, 962, 1117, 1418
Alw26I	GTCTC	4 cut(s)	377, 421, 776, 850
AlwI	GGATC	2 cut(s)	165, 1247
AlwNI	CAGNNNCTG	1 cut(s)	1093
AoxI	GGCC	4 cut(s)	590, 609, 887, 906
ApoI	RAATTY	1 cut(s)	237
ArsI	GACNNNNNNTTYG	2 cut(s)	474, 506
AspLEI	GCGC	2 cut(s)	22, 635
AspS9I	GGNCC	5 cut(s)	47, 176, 887, 1228, 1409
AsuC2I	CCSGG	1 cut(s)	81
AsuHPI	GGTGA	4 cut(s)	85, 406, 532, 540
AsuNHI	GCTAGC	1 cut(s)	506
AvaII	GGWCC	4 cut(s)	47, 176, 1228, 1409
BaeGI	GKGCMC	2 cut(s)	71, 869
BaeI	ACNNNNGTAYC	2 cut(s)	1082, 1115
BanI	GGYRCC	1 cut(s)	125
BarI	GAAGNNNNNNTAC	2 cut(s)	194, 226
BccI	CCATC	9 cut(s)	188, 391, 476, 551, 804, 1164, 1310, 1356, 1369
BciT130I	CCWGG	3 cut(s)	354, 552, 1326
BciVI	GTATCC	2 cut(s)	375, 1372
BcnI	CCSGG	1 cut(s)	81
BcoDI	GTCTC	4 cut(s)	377, 421, 776, 850
BfaI	CTAG	3 cut(s)	507, 912, 942
BfmI	CTRYAG	1 cut(s)	615
BfoI	RGCGCY	1 cut(s)	636
BfuAI	ACCTGC	1 cut(s)	1078
BfuI	GTATCC	2 cut(s)	375, 1372
BisI	GCNGC	3 cut(s)	612, 909, 1049
BlsI	GCNGC	3 cut(s)	613, 910, 1050
BmcAI	AGTACT	1 cut(s)	1043
Bme1390I	CCNGG	4 cut(s)	81, 354, 552, 1326
Bme18I	GGWCC	4 cut(s)	47, 176, 1228, 1409
BmgT120I	GGNCC	5 cut(s)	47, 176, 887, 1228, 1409
BmiI	GGNNCC	7 cut(s)	85, 127, 178, 281, 315, 1230, 1410
BmrFI	CCNGG	4 cut(s)	81, 354, 552, 1326
BmsI	GCATC	3 cut(s)	493, 758, 1174
BmtI	GCTAGC	1 cut(s)	510
BpmI	CTGGAG	2 cut(s)	1115, 1347
BpuMI	CCSGG	1 cut(s)	81
BsaAI	YACGTR	1 cut(s)	625
BsaBI	GATNNNNATC	2 cut(s)	363, 1155
BsaJI	CCNNGG	2 cut(s)	35, 172
BsaWI	WCCGGW	1 cut(s)	440
BsaXI	ACNNNNNCTCC	2 cut(s)	1106, 1136
Bsc4I	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
Bse1I	ACTGG	2 cut(s)	862, 1098
Bse3DI	GCAATG	2 cut(s)	1272, 1342
Bse8I	GATNNNNATC	2 cut(s)	363, 1155
BseBI	CCWGG	3 cut(s)	354, 552, 1326
BseDI	CCNNGG	2 cut(s)	35, 172
BseGI	GGATG	4 cut(s)	796, 1156, 1156, 1380
BseJI	GATNNNNATC	2 cut(s)	363, 1155
BseLI	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
BseMI	GCAATG	2 cut(s)	1272, 1342
BseMII	CTCAG	2 cut(s)	416, 787
BseNI	ACTGG	2 cut(s)	862, 1098
BseRI	GAGGAG	1 cut(s)	1248
BseSI	GKGCMC	2 cut(s)	71, 869
BseYI	CCCAGC	1 cut(s)	884
BsgI	GTGCAG	1 cut(s)	1106
Bsh1236I	CGCG	2 cut(s)	901, 1106
BshFI	GGCC	4 cut(s)	592, 611, 889, 908
BshNI	GGYRCC	1 cut(s)	125
BsiSI	CCGG	3 cut(s)	80, 306, 441
BslFI	GGGAC	6 cut(s)	162, 910, 1090, 1144, 1265, 1422
BslI	CCNNNNNNNGG	3 cut(s)	135, 1073, 1289
BsmAI	GTCTC	4 cut(s)	377, 421, 776, 850
BsmBI	CGTCTC	2 cut(s)	377, 850
BsmFI	GGGAC	6 cut(s)	162, 910, 1090, 1144, 1265, 1422
BsnI	GGCC	4 cut(s)	592, 611, 889, 908
Bsp1286I	GDGCHC	2 cut(s)	71, 869
Bsp143I	GATC	4 cut(s)	102, 157, 358, 1252
Bsp19I	CCATGG	1 cut(s)	35
BspACI	CCGC	4 cut(s)	612, 909, 1013, 1049
BspANI	GGCC	4 cut(s)	592, 611, 889, 908
BspCNI	CTCAG	2 cut(s)	417, 786
BspFNI	CGCG	2 cut(s)	901, 1106
BspLI	GGNNCC	7 cut(s)	85, 127, 178, 281, 315, 1230, 1410
BspMI	ACCTGC	1 cut(s)	1078
BspOI	GCTAGC	1 cut(s)	510
BspPI	GGATC	2 cut(s)	165, 1247
BspT107I	GGYRCC	1 cut(s)	125
BsrDI	GCAATG	2 cut(s)	1272, 1342
BsrI	ACTGG	2 cut(s)	862, 1098
BssECI	CCNNGG	2 cut(s)	35, 172
BssMI	GATC	4 cut(s)	102, 157, 358, 1252
BssT1I	CCWWGG	1 cut(s)	35
Bst2UI	CCWGG	3 cut(s)	354, 552, 1326
Bst6I	CTCTTC	2 cut(s)	303, 1266
BstBAI	YACGTR	1 cut(s)	625
BstC8I	GCNNGC	4 cut(s)	8, 141, 224, 508
BstDEI	CTNAG	2 cut(s)	425, 773
BstDSI	CCRYGG	2 cut(s)	35, 172
BstF5I	GGATG	4 cut(s)	796, 1156, 1156, 1380
BstFNI	CGCG	2 cut(s)	901, 1106
BstH2I	RGCGCY	1 cut(s)	636
BstHHI	GCGC	2 cut(s)	22, 635
BstKTI	GATC	4 cut(s)	105, 160, 361, 1255
BstMAI	GTCTC	4 cut(s)	377, 421, 776, 850
BstMBI	GATC	4 cut(s)	102, 157, 358, 1252
BstMWI	GCNNNNNNNGC	1 cut(s)	617
BstNI	CCWGG	3 cut(s)	354, 552, 1326
BstNSI	RCATGY	1 cut(s)	143
BstSCI	CCNGG	4 cut(s)	79, 352, 550, 1324
BstSFI	CTRYAG	1 cut(s)	615
BstSLI	GKGCMC	2 cut(s)	71, 869
BstSNI	TACGTA	1 cut(s)	625
BstUI	CGCG	2 cut(s)	901, 1106
BsuI	GTATCC	2 cut(s)	375, 1372
BsuRI	GGCC	4 cut(s)	592, 611, 889, 908
BtgI	CCRYGG	2 cut(s)	35, 172
BtgZI	GCGATG	1 cut(s)	454
BtsCI	GGATG	4 cut(s)	796, 1156, 1156, 1380
BtsIMutI	CAGTG	5 cut(s)	71, 154, 165, 869, 1116
BveI	ACCTGC	1 cut(s)	1078
Cac8I	GCNNGC	4 cut(s)	8, 141, 224, 508
CaiI	CAGNNNCTG	1 cut(s)	1093
CfoI	GCGC	2 cut(s)	22, 635
Cfr13I	GGNCC	5 cut(s)	47, 176, 887, 1228, 1409
CseI	GACGC	3 cut(s)	338, 890, 907
CsiI	ACCWGGT	1 cut(s)	550
Csp6I	GTAC	4 cut(s)	1042, 1054, 1091, 1099
CviQI	GTAC	4 cut(s)	1042, 1054, 1091, 1099
DdeI	CTNAG	2 cut(s)	425, 773
DpnI	GATC	4 cut(s)	104, 159, 360, 1254
DpnII	GATC	4 cut(s)	102, 157, 358, 1252
DraIII	CACNNNGTG	1 cut(s)	66
EaeI	YGGCCR	2 cut(s)	609, 906
Eam1104I	CTCTTC	2 cut(s)	303, 1266
EarI	CTCTTC	2 cut(s)	303, 1266
Eco105I	TACGTA	1 cut(s)	625
Eco130I	CCWWGG	1 cut(s)	35
Eco147I	AGGCCT	1 cut(s)	592
Eco47I	GGWCC	4 cut(s)	47, 176, 1228, 1409
Eco57I	CTGAAG	1 cut(s)	1043
EcoO109I	RGGNCCY	2 cut(s)	1228, 1409
EcoRII	CCWGG	3 cut(s)	352, 550, 1324
EcoT14I	CCWWGG	1 cut(s)	35
EcoT22I	ATGCAT	3 cut(s)	751, 1167, 1344
ErhI	CCWWGG	1 cut(s)	35
Esp3I	CGTCTC	2 cut(s)	377, 850
FalI	AAGNNNNNCTT	2 cut(s)	114, 146
FaqI	GGGAC	6 cut(s)	162, 910, 1090, 1144, 1265, 1422
FauI	CCCGC	1 cut(s)	1020
FauNDI	CATATG	1 cut(s)	1362
Fnu4HI	GCNGC	3 cut(s)	612, 909, 1049
FokI	GGATG	4 cut(s)	783, 1143, 1163, 1387
Fsp4HI	GCNGC	3 cut(s)	612, 909, 1049
FspBI	CTAG	3 cut(s)	507, 912, 942
FspI	TGCGCA	1 cut(s)	21
GlaI	GCGC	2 cut(s)	21, 634
GluI	GCNGC	3 cut(s)	612, 909, 1049
GsaI	CCCAGC	1 cut(s)	888
GsuI	CTGGAG	2 cut(s)	1115, 1347
HaeII	RGCGCY	1 cut(s)	636
HaeIII	GGCC	4 cut(s)	592, 611, 889, 908
HapII	CCGG	3 cut(s)	80, 306, 441
HgaI	GACGC	3 cut(s)	338, 890, 907
HhaI	GCGC	2 cut(s)	22, 635
Hin6I	GCGC	2 cut(s)	20, 633
HinP1I	GCGC	2 cut(s)	20, 633
HincII	GTYRAC	2 cut(s)	350, 853
HindII	GTYRAC	2 cut(s)	350, 853
HindIII	AAGCTT	1 cut(s)	960
HinfI	GANTC	3 cut(s)	454, 682, 1308
HpaII	CCGG	3 cut(s)	80, 306, 441
HphI	GGTGA	4 cut(s)	85, 406, 532, 540
Hpy166II	GTNNAC	7 cut(s)	93, 172, 350, 853, 919, 937, 1296
Hpy188I	TCNGA	6 cut(s)	43, 328, 382, 588, 1062, 1307
Hpy188III	TCNNGA	3 cut(s)	775, 1004, 1352
Hpy8I	GTNNAC	7 cut(s)	93, 172, 350, 853, 919, 937, 1296
Hpy99I	CGWCG	1 cut(s)	332
HpyAV	CCTTC	4 cut(s)	116, 259, 708, 1067
HpyCH4IV	ACGT	4 cut(s)	386, 624, 807, 857
HpyCH4V	TGCA	6 cut(s)	233, 448, 749, 1087, 1165, 1342
HpyF10VI	GCNNNNNNNGC	1 cut(s)	617
HpyF3I	CTNAG	2 cut(s)	425, 773
HpySE526I	ACGT	4 cut(s)	386, 624, 807, 857
HspAI	GCGC	2 cut(s)	20, 633
Kzo9I	GATC	4 cut(s)	102, 157, 358, 1252
LmnI	GCTCC	4 cut(s)	83, 579, 777, 1114
LweI	GCATC	3 cut(s)	493, 758, 1174
MabI	ACCWGGT	1 cut(s)	550
MaeI	CTAG	3 cut(s)	507, 912, 942
MaeII	ACGT	4 cut(s)	386, 624, 807, 857
MaeIII	GTNAC	4 cut(s)	484, 538, 689, 1175
MalI	GATC	4 cut(s)	104, 159, 360, 1254
MboI	GATC	4 cut(s)	102, 157, 358, 1252
MboII	GAAGA	7 cut(s)	214, 217, 290, 693, 716, 1160, 1253
MhlI	GDGCHC	2 cut(s)	71, 869
MluCI	AATT	6 cut(s)	72, 208, 237, 819, 874, 1135
MluI	ACGCGT	1 cut(s)	899
MmeI	TCCRAC	3 cut(s)	21, 351, 1174
MnlI	CCTC	9 cut(s)	112, 237, 302, 582, 1067, 1075, 1266, 1269, 1440
Mph1103I	ATGCAT	3 cut(s)	751, 1167, 1344
MseI	TTAA	1 cut(s)	1026
MslI	CAYNNNNRTG	2 cut(s)	762, 1170
MspA1I	CMGCKG	1 cut(s)	1051
MspI	CCGG	3 cut(s)	80, 306, 441
MspR9I	CCNGG	4 cut(s)	81, 354, 552, 1326
MvaI	CCWGG	3 cut(s)	354, 552, 1326
MvnI	CGCG	2 cut(s)	901, 1106
MwoI	GCNNNNNNNGC	1 cut(s)	617
NciI	CCSGG	1 cut(s)	81
NcoI	CCATGG	1 cut(s)	35
NdeI	CATATG	1 cut(s)	1362
NdeII	GATC	4 cut(s)	102, 157, 358, 1252
NheI	GCTAGC	1 cut(s)	506
NlaIV	GGNNCC	7 cut(s)	85, 127, 178, 281, 315, 1230, 1410
NmuCI	GTSAC	2 cut(s)	484, 538
NsbI	TGCGCA	1 cut(s)	21
NsiI	ATGCAT	3 cut(s)	751, 1167, 1344
NspI	RCATGY	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	143
PceI	AGGCCT	1 cut(s)	592
PfeI	GAWTC	3 cut(s)	454, 682, 1308
PfoI	TCCNGGA	1 cut(s)	1324
PkrI	GCNGC	3 cut(s)	613, 910, 1050
Ppu21I	YACGTR	1 cut(s)	625
PpuMI	RGGWCCY	2 cut(s)	1228, 1409
Psp5II	RGGWCCY	2 cut(s)	1228, 1409
Psp6I	CCWGG	3 cut(s)	352, 550, 1324
PspFI	CCCAGC	1 cut(s)	884
PspGI	CCWGG	3 cut(s)	352, 550, 1324
PspN4I	GGNNCC	7 cut(s)	85, 127, 178, 281, 315, 1230, 1410
PspPI	GGNCC	5 cut(s)	47, 176, 887, 1228, 1409
PspPPI	RGGWCCY	2 cut(s)	1228, 1409
PstNI	CAGNNNCTG	1 cut(s)	1093
RsaI	GTAC	4 cut(s)	1043, 1055, 1092, 1100
RsaNI	GTAC	4 cut(s)	1042, 1054, 1091, 1099
RseI	CAYNNNNRTG	2 cut(s)	762, 1170
SaqAI	TTAA	1 cut(s)	1026
SatI	GCNGC	3 cut(s)	612, 909, 1049
Sau3AI	GATC	4 cut(s)	102, 157, 358, 1252
Sau96I	GGNCC	5 cut(s)	47, 176, 887, 1228, 1409
ScaI	AGTACT	1 cut(s)	1043
ScrFI	CCNGG	4 cut(s)	81, 354, 552, 1326
SduI	GDGCHC	2 cut(s)	71, 869
SexAI	ACCWGGT	1 cut(s)	550
SfaNI	GCATC	3 cut(s)	493, 758, 1174
SfcI	CTRYAG	1 cut(s)	615
SinI	GGWCC	4 cut(s)	47, 176, 1228, 1409
SmiMI	CAYNNNNRTG	2 cut(s)	762, 1170
SnaBI	TACGTA	1 cut(s)	625
SphI	GCATGC	1 cut(s)	143
Sse9I	AATT	6 cut(s)	72, 208, 237, 819, 874, 1135
SseBI	AGGCCT	1 cut(s)	592
SsiI	CCGC	4 cut(s)	612, 909, 1013, 1049
SspMI	CTAG	3 cut(s)	507, 912, 942
StuI	AGGCCT	1 cut(s)	592
StyD4I	CCNGG	4 cut(s)	79, 352, 550, 1324
StyI	CCWWGG	1 cut(s)	35
TaiI	ACGT	4 cut(s)	389, 627, 810, 860
TaqI	TCGA	1 cut(s)	160
TasI	AATT	6 cut(s)	72, 208, 237, 819, 874, 1135
TatI	WGTACW	2 cut(s)	1041, 1098
TauI	GCSGC	3 cut(s)	614, 911, 1051
TfiI	GAWTC	3 cut(s)	454, 682, 1308
Tru1I	TTAA	1 cut(s)	1026
Tru9I	TTAA	1 cut(s)	1026
TscAI	CASTG	5 cut(s)	71, 154, 172, 869, 1116
TseFI	GTSAC	2 cut(s)	484, 538
Tsp45I	GTSAC	2 cut(s)	484, 538
TspDTI	ATGAA	3 cut(s)	746, 867, 1160
TspGWI	ACGGA	3 cut(s)	60, 545, 838
TspRI	CASTG	5 cut(s)	71, 154, 172, 869, 1116
VpaK11BI	GGWCC	4 cut(s)	47, 176, 1228, 1409
XapI	RAATTY	1 cut(s)	237
XceI	RCATGY	1 cut(s)	143
XcmI	CCANNNNNNNNNTGG	1 cut(s)	33
XspI	CTAG	3 cut(s)	507, 912, 942
ZrmI	AGTACT	1 cut(s)	1043
Zsp2I	ATGCAT	3 cut(s)	751, 1167, 1344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.