Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Forward (+)

12000766 .. 12014253

Gene Structure 13488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG078000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGATGAAGATCCCGCTGAGTGACTTAGCTATTGTGCAGGTGAAAGAAGCTACATATACAAGGCTGTGCAGCACTAAAAAGATATTGACTGTTAATGGAAAATTTCCTGGACCAGTTTTACGAGCTTATAGAGGAGATACAATCTATGTCAATGTTCATAACGGTGGCAGATACAATATCACTATTCACTGGCATGGAGTAAAGCAACCAAGGAATCCATGGCCTGATGGTCCGGAATACATCACACAATGTCCTATTCAACCTGGGGGAAGTTTCAAACAAAAGATCATATTTTCTACAGAAGAAGGTACCATTTGGTGGCACGCTCACAGTGATTGGTCACGTGCGACAGTTCATGGAGCAATCTATGTCTATCCAAAGCCAGGAACTAGCTACCCTTTTCCTAAGCCCCATGATGAAGTTCCCATAATATTAGGTGAGTGGTGGAAGCAAGATGTAATGGAGGTACTTAACGAATTTGTTAGAACCGGAGGAGCTCCAAATGCCTCTGACGCATACACAATAAATGGTCAACCTGGAGACCTCTATCCTTGCTCAAAATCAGATACATTCAAACTCTCTGTGGACCAAAACAAGACCTACCTGCTCCGAATAATCCACGCAGGAATCAACGAGATCCACTTCATGGCGGTGGCAAACCATAAACTCACGGTGGTCGCGACAGACGCAAGCTACACGAAGCCGATCGAAACAGACTACATCGCAATATCTCCTGGCCAATCCATGGATGCCTTGTTGGTCACGAACCAACAACCTGGTCGCTATTACATGGCTGCTAGGGCTTACCACAGTAACCCTGCGATTGCTTTCGACAACACCACCACCACAGCAATAGTTGAGTACAATAATGGAAATGAGAATGAGAATGATACTCCATTATTTCCTTACCTACCTCCCTTTAATGACACAGAAAGAGCCTTAGGCTTTTGCACTAAGCTTAAGAGCCTACCCGTTGAGTTCAAAGAGCATGTCCCGAAAACTATCACAACTCGAATAATTTCAACAGTTTCAGTCAACACATTCCCTTGCCAGGGAAATCAAACATGTCAAGGACCCAACGGGACGCGATTAGCTGCCAGTATGAACAACATAAGCTTTGTGGAGCCAGATACAGTAGACATACTAGAAGCTTACTACTACTATATCAATGGAGTTTTCAAAAAGGGTTTTCCAGATTCTCCGCCGTACATGTTTAATTTCACTGCTCAGGACCTGCCTCTTATTTTGCAAATACCAAAGAGGGGGACGAAGGTAAAGTTTCTGGAATATGGGACGGATGTGGAAGTTGTGTATCAAAATACAAACTTAGTCGGTGGGATAGATCACCCTATGCATCTTCATGGGTATGACTTCCACATAGTTGGAACTGGCTTTGGAAATTTTGACGAAGAAAAGGACCCATTGAGCTACAATCTTGTTGATCCTCCTCTTAGGAACACTGTGACTGTCCCCGTAAGTGGTTGGGCCGCAATGAGATTCAAGGCCACAAATCCTGGTAATCATGCTATACTCAGAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

513

Amino Acids

57.48

Weight (kDa)

6.49

Isoelectric Point (pI)

28.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	14 - 127	6.2e-38	Multicopper oxidase
Cu-oxidase	PF00394	140 - 290	2.6e-43	Multicopper oxidase
Cu-oxidase_2	PF07731	400 - 507	2.7e-25	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	28
Acc36I	ACCTGC	3 cut(s)	28, 612, 1242
Acc65I	GGTACC	1 cut(s)	308
AccB1I	GGYRCC	1 cut(s)	308
AccB7I	CCANNNNNTGG	3 cut(s)	318, 646, 745
AccI	GTMKAC	1 cut(s)	1137
AccII	CGCG	2 cut(s)	680, 1087
AccIII	TCCGGA	1 cut(s)	232
AciI	CCGC	4 cut(s)	14, 650, 1202, 1488
AclWI	GGATC	3 cut(s)	4, 631, 1436
AcoI	YGGCCR	1 cut(s)	736
AcsI	RAATTY	3 cut(s)	101, 476, 1399
AcvI	CACGTG	1 cut(s)	344
AfaI	GTAC	4 cut(s)	310, 468, 863, 1208
AfiI	CCNNNNNNNGG	8 cut(s)	318, 383, 646, 745, 1051, 1052, 1262, 1478
AflII	CTTAAG	1 cut(s)	959
AflIII	ACRYGT	2 cut(s)	1064, 1209
AgsI	TTSAA	7 cut(s)	260, 277, 574, 982, 1023, 1180, 1501
AjnI	CCWGG	8 cut(s)	106, 262, 382, 535, 733, 775, 1050, 1513
Alw21I	GWGCWC	1 cut(s)	499
Alw26I	GTCTC	1 cut(s)	534
AlwI	GGATC	3 cut(s)	4, 631, 1436
AlwNI	CAGNNNCTG	1 cut(s)	1234
Aor13HI	TCCGGA	1 cut(s)	232
AoxI	GGCC	4 cut(s)	221, 736, 1485, 1503
ApeKI	GCWGC	3 cut(s)	69, 794, 1094
ApoI	RAATTY	3 cut(s)	101, 476, 1399
ArsI	GACNNNNNNTTYG	2 cut(s)	975, 1007
Asp700I	GAANNNNTTC	1 cut(s)	1018
Asp718I	GGTACC	1 cut(s)	308
AspS9I	GGNCC	7 cut(s)	110, 230, 586, 1073, 1231, 1417, 1485
AsuHPI	GGTGA	3 cut(s)	52, 449, 1337
AvaII	GGWCC	6 cut(s)	110, 230, 586, 1073, 1231, 1417
AxyI	CCTNAGG	1 cut(s)	940
BalI	TGGCCA	1 cut(s)	738
BanI	GGYRCC	1 cut(s)	308
BanII	GRGCYC	1 cut(s)	499
BbrPI	CACGTG	1 cut(s)	344
Bbv12I	GWGCWC	1 cut(s)	499
BbvI	GCAGC	3 cut(s)	81, 781, 1081
BccI	CCATC	1 cut(s)	221
BceAI	ACGGC	1 cut(s)	1189
BciT130I	CCWGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
BcoDI	GTCTC	1 cut(s)	534
BfaI	CTAG	3 cut(s)	390, 798, 1145
BfmI	CTRYAG	1 cut(s)	297
BfrI	CTTAAG	1 cut(s)	959
BfuAI	ACCTGC	3 cut(s)	28, 612, 1242
BisI	GCNGC	4 cut(s)	70, 795, 1095, 1488
BlsI	GCNGC	4 cut(s)	71, 796, 1096, 1489
Bme1390I	CCNGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
Bme18I	GGWCC	6 cut(s)	110, 230, 586, 1073, 1231, 1417
BmgT120I	GGNCC	7 cut(s)	110, 230, 586, 1073, 1231, 1417, 1485
BmiI	GGNNCC	4 cut(s)	310, 1075, 1125, 1419
BmrFI	CCNGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
BmsI	GCATC	2 cut(s)	739, 1363
BpmI	CTGGAG	1 cut(s)	558
Bpu10I	CCTNAGC	2 cut(s)	405, 1227
BsaAI	YACGTR	1 cut(s)	344
BsaBI	GATNNNNATC	1 cut(s)	8
BsaI	GGTCTC	1 cut(s)	534
BsaJI	CCNNGG	5 cut(s)	209, 218, 263, 744, 1051
BsaWI	WCCGGW	2 cut(s)	232, 488
Bsc4I	CCNNNNNNNGG	8 cut(s)	318, 383, 646, 745, 1051, 1052, 1262, 1478
Bse1I	ACTGG	4 cut(s)	113, 194, 1098, 1393
Bse21I	CCTNAGG	1 cut(s)	940
Bse3DI	GCAATG	1 cut(s)	1497
Bse8I	GATNNNNATC	1 cut(s)	8
BseAI	TCCGGA	1 cut(s)	232
BseBI	CCWGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
BseDI	CCNNGG	5 cut(s)	209, 218, 263, 744, 1051
BseGI	GGATG	2 cut(s)	754, 1303
BseJI	GATNNNNATC	1 cut(s)	8
BseLI	CCNNNNNNNGG	8 cut(s)	318, 383, 646, 745, 1051, 1052, 1262, 1478
BseMI	GCAATG	1 cut(s)	1497
BseMII	CTCAG	2 cut(s)	8, 1241
BseNI	ACTGG	4 cut(s)	113, 194, 1098, 1393
BseRI	GAGGAG	3 cut(s)	147, 507, 1437
BseXI	GCAGC	3 cut(s)	81, 781, 1081
BsgI	GTGCAG	2 cut(s)	56, 88
Bsh1236I	CGCG	2 cut(s)	680, 1087
Bsh1285I	CGRYCG	1 cut(s)	708
BshFI	GGCC	4 cut(s)	223, 738, 1487, 1505
BshNI	GGYRCC	1 cut(s)	308
BsiEI	CGRYCG	1 cut(s)	708
BsiHKAI	GWGCWC	1 cut(s)	499
BsiSI	CCGG	2 cut(s)	233, 489
BslFI	GGGAC	5 cut(s)	977, 1096, 1279, 1306, 1454
BslI	CCNNNNNNNGG	8 cut(s)	318, 383, 646, 745, 1051, 1052, 1262, 1478
BsmAI	GTCTC	1 cut(s)	534
BsmFI	GGGAC	5 cut(s)	977, 1096, 1279, 1306, 1454
BsnI	GGCC	4 cut(s)	223, 738, 1487, 1505
Bso31I	GGTCTC	1 cut(s)	534
Bsp1286I	GDGCHC	1 cut(s)	499
Bsp13I	TCCGGA	1 cut(s)	232
Bsp143I	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
Bsp19I	CCATGG	2 cut(s)	218, 744
Bsp68I	TCGCGA	1 cut(s)	680
BspACI	CCGC	4 cut(s)	14, 650, 1202, 1488
BspANI	GGCC	4 cut(s)	223, 738, 1487, 1505
BspCNI	CTCAG	2 cut(s)	9, 1240
BspEI	TCCGGA	1 cut(s)	232
BspFNI	CGCG	2 cut(s)	680, 1087
BspLI	GGNNCC	4 cut(s)	310, 1075, 1125, 1419
BspMI	ACCTGC	3 cut(s)	28, 612, 1242
BspPI	GGATC	3 cut(s)	4, 631, 1436
BspT107I	GGYRCC	1 cut(s)	308
BspTI	CTTAAG	1 cut(s)	959
BspTNI	GGTCTC	1 cut(s)	534
BsrDI	GCAATG	1 cut(s)	1497
BsrI	ACTGG	4 cut(s)	113, 194, 1098, 1393
BssECI	CCNNGG	5 cut(s)	209, 218, 263, 744, 1051
BssMI	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
BssT1I	CCWWGG	3 cut(s)	209, 218, 744
Bst2UI	CCWGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
BstAFI	CTTAAG	1 cut(s)	959
BstBAI	YACGTR	1 cut(s)	344
BstC8I	GCNNGC	2 cut(s)	324, 691
BstDEI	CTNAG	9 cut(s)	17, 25, 405, 940, 954, 1227, 1327, 1451, 1532
BstDSI	CCRYGG	2 cut(s)	218, 744
BstF5I	GGATG	2 cut(s)	754, 1303
BstFNI	CGCG	2 cut(s)	680, 1087
BstKTI	GATC	6 cut(s)	12, 288, 639, 708, 1345, 1444
BstMAI	GTCTC	1 cut(s)	534
BstMBI	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
BstMCI	CGRYCG	1 cut(s)	708
BstMWI	GCNNNNNNNGC	4 cut(s)	503, 512, 686, 800
BstNI	CCWGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
BstNSI	RCATGY	3 cut(s)	992, 1068, 1213
BstSCI	CCNGG	8 cut(s)	106, 262, 382, 535, 733, 775, 1050, 1513
BstSFI	CTRYAG	1 cut(s)	297
BstUI	CGCG	2 cut(s)	680, 1087
BstV1I	GCAGC	3 cut(s)	81, 781, 1081
BstX2I	RGATCY	2 cut(s)	9, 636
BstXI	CCANNNNNNTGG	2 cut(s)	776, 1382
BstYI	RGATCY	2 cut(s)	9, 636
Bsu36I	CCTNAGG	1 cut(s)	940
BsuRI	GGCC	4 cut(s)	223, 738, 1487, 1505
BtgI	CCRYGG	2 cut(s)	218, 744
BtgZI	GCGATG	1 cut(s)	706
BtsCI	GGATG	2 cut(s)	754, 1303
BtsI	GCAGTG	1 cut(s)	1221
BtsIMutI	CAGTG	4 cut(s)	187, 337, 1221, 1458
BtuMI	TCGCGA	1 cut(s)	680
BveI	ACCTGC	3 cut(s)	28, 612, 1242
Cac8I	GCNNGC	2 cut(s)	324, 691
CaiI	CAGNNNCTG	1 cut(s)	1234
Cfr13I	GGNCC	7 cut(s)	110, 230, 586, 1073, 1231, 1417, 1485
CseI	GACGC	3 cut(s)	521, 695, 1093
CsiI	ACCWGGT	1 cut(s)	775
Csp6I	GTAC	4 cut(s)	309, 467, 862, 1207
CviQI	GTAC	4 cut(s)	309, 467, 862, 1207
DdeI	CTNAG	9 cut(s)	17, 25, 405, 940, 954, 1227, 1327, 1451, 1532
DpnI	GATC	6 cut(s)	11, 287, 638, 707, 1344, 1443
DpnII	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
EaeI	YGGCCR	1 cut(s)	736
EciI	GGCGGA	1 cut(s)	1191
Ecl136II	GAGCTC	1 cut(s)	497
Eco130I	CCWWGG	3 cut(s)	209, 218, 744
Eco24I	GRGCYC	1 cut(s)	499
Eco31I	GGTCTC	1 cut(s)	534
Eco47I	GGWCC	6 cut(s)	110, 230, 586, 1073, 1231, 1417
Eco53kI	GAGCTC	1 cut(s)	497
Eco72I	CACGTG	1 cut(s)	344
Eco81I	CCTNAGG	1 cut(s)	940
EcoICRI	GAGCTC	1 cut(s)	497
EcoO109I	RGGNCCY	3 cut(s)	1073, 1231, 1417
EcoRII	CCWGG	8 cut(s)	106, 262, 382, 535, 733, 775, 1050, 1513
EcoT14I	CCWWGG	3 cut(s)	209, 218, 744
EcoT22I	ATGCAT	1 cut(s)	1356
EcoT38I	GRGCYC	1 cut(s)	499
ErhI	CCWWGG	3 cut(s)	209, 218, 744
FaqI	GGGAC	5 cut(s)	977, 1096, 1279, 1306, 1454
FauI	CCCGC	1 cut(s)	21
FblI	GTMKAC	1 cut(s)	1137
Fnu4HI	GCNGC	4 cut(s)	70, 795, 1095, 1488
FokI	GGATG	2 cut(s)	761, 1310
FriOI	GRGCYC	1 cut(s)	499
Fsp4HI	GCNGC	4 cut(s)	70, 795, 1095, 1488
FspBI	CTAG	3 cut(s)	390, 798, 1145
GluI	GCNGC	4 cut(s)	70, 795, 1095, 1488
GsuI	CTGGAG	1 cut(s)	558
HaeIII	GGCC	4 cut(s)	223, 738, 1487, 1505
HapII	CCGG	2 cut(s)	233, 489
HgaI	GACGC	3 cut(s)	521, 695, 1093
HincII	GTYRAC	2 cut(s)	533, 1036
HindII	GTYRAC	2 cut(s)	533, 1036
HindIII	AAGCTT	3 cut(s)	956, 1114, 1149
HinfI	GANTC	4 cut(s)	214, 627, 1196, 1497
HpaII	CCGG	2 cut(s)	233, 489
HphI	GGTGA	3 cut(s)	52, 449, 1337
Hpy166II	GTNNAC	4 cut(s)	533, 586, 1036, 1138
Hpy188I	TCNGA	4 cut(s)	511, 565, 611, 1535
Hpy188III	TCNNGA	7 cut(s)	233, 679, 763, 994, 1193, 1229, 1283
Hpy8I	GTNNAC	4 cut(s)	533, 586, 1036, 1138
HpyAV	CCTTC	2 cut(s)	299, 1264
HpyCH4IV	ACGT	1 cut(s)	343
HpyCH4V	TGCA	5 cut(s)	37, 69, 951, 1249, 1354
HpyF10VI	GCNNNNNNNGC	4 cut(s)	503, 512, 686, 800
HpyF3I	CTNAG	9 cut(s)	17, 25, 405, 940, 954, 1227, 1327, 1451, 1532
HpySE526I	ACGT	1 cut(s)	343
Kpn2I	TCCGGA	1 cut(s)	232
KpnI	GGTACC	1 cut(s)	312
Kzo9I	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
LmnI	GCTCC	5 cut(s)	359, 494, 502, 612, 1123
Lsp1109I	GCAGC	3 cut(s)	81, 781, 1081
LweI	GCATC	2 cut(s)	739, 1363
MabI	ACCWGGT	1 cut(s)	775
MaeI	CTAG	3 cut(s)	390, 798, 1145
MaeII	ACGT	1 cut(s)	343
MaeIII	GTNAC	5 cut(s)	20, 339, 760, 812, 1462
MalI	GATC	6 cut(s)	11, 287, 638, 707, 1344, 1443
MboI	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
MboII	GAAGA	4 cut(s)	19, 314, 1349, 1421
MflI	RGATCY	2 cut(s)	9, 636
MhlI	GDGCHC	1 cut(s)	499
MlsI	TGGCCA	1 cut(s)	738
MluCI	AATT	5 cut(s)	101, 476, 1017, 1216, 1399
MluNI	TGGCCA	1 cut(s)	738
MmeI	TCCRAC	1 cut(s)	1363
Mox20I	TGGCCA	1 cut(s)	738
Mph1103I	ATGCAT	1 cut(s)	1356
MroI	TCCGGA	1 cut(s)	232
MroXI	GAANNNNTTC	1 cut(s)	1018
MscI	TGGCCA	1 cut(s)	738
MseI	TTAA	5 cut(s)	93, 471, 921, 960, 1215
MslI	CAYNNNNRTG	5 cut(s)	162, 192, 650, 1359, 1365
Msp20I	TGGCCA	1 cut(s)	738
MspA1I	CMGCKG	1 cut(s)	16
MspCI	CTTAAG	1 cut(s)	959
MspI	CCGG	2 cut(s)	233, 489
MspR9I	CCNGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
MvaI	CCWGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
MvnI	CGCG	2 cut(s)	680, 1087
MwoI	GCNNNNNNNGC	4 cut(s)	503, 512, 686, 800
NcoI	CCATGG	2 cut(s)	218, 744
NdeII	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
NlaIV	GGNNCC	4 cut(s)	310, 1075, 1125, 1419
NmuCI	GTSAC	4 cut(s)	20, 339, 760, 1462
NruI	TCGCGA	1 cut(s)	680
NsiI	ATGCAT	1 cut(s)	1356
NspI	RCATGY	3 cut(s)	992, 1068, 1213
PaqCI	CACCTGC	1 cut(s)	28
PciI	ACATGT	2 cut(s)	1064, 1209
PcsI	WCGNNNNNNNCGW	1 cut(s)	677
PdmI	GAANNNNTTC	1 cut(s)	1018
PfeI	GAWTC	4 cut(s)	214, 627, 1196, 1497
PflMI	CCANNNNNTGG	3 cut(s)	318, 646, 745
PfoI	TCCNGGA	1 cut(s)	106
PkrI	GCNGC	4 cut(s)	71, 796, 1096, 1489
Ple19I	CGATCG	1 cut(s)	708
PmaCI	CACGTG	1 cut(s)	344
PmlI	CACGTG	1 cut(s)	344
Ppu21I	YACGTR	1 cut(s)	344
PpuMI	RGGWCCY	3 cut(s)	1073, 1231, 1417
PscI	ACATGT	2 cut(s)	1064, 1209
Psp124BI	GAGCTC	1 cut(s)	499
Psp5II	RGGWCCY	3 cut(s)	1073, 1231, 1417
Psp6I	CCWGG	8 cut(s)	106, 262, 382, 535, 733, 775, 1050, 1513
PspCI	CACGTG	1 cut(s)	344
PspGI	CCWGG	8 cut(s)	106, 262, 382, 535, 733, 775, 1050, 1513
PspN4I	GGNNCC	4 cut(s)	310, 1075, 1125, 1419
PspPI	GGNCC	7 cut(s)	110, 230, 586, 1073, 1231, 1417, 1485
PspPPI	RGGWCCY	3 cut(s)	1073, 1231, 1417
PstNI	CAGNNNCTG	1 cut(s)	1234
PsuI	RGATCY	2 cut(s)	9, 636
PvuI	CGATCG	1 cut(s)	708
RruI	TCGCGA	1 cut(s)	680
RsaI	GTAC	4 cut(s)	310, 468, 863, 1208
RsaNI	GTAC	4 cut(s)	309, 467, 862, 1207
RseI	CAYNNNNRTG	5 cut(s)	162, 192, 650, 1359, 1365
SacI	GAGCTC	1 cut(s)	499
SaqAI	TTAA	5 cut(s)	93, 471, 921, 960, 1215
SatI	GCNGC	4 cut(s)	70, 795, 1095, 1488
Sau3AI	GATC	6 cut(s)	9, 285, 636, 705, 1342, 1441
Sau96I	GGNCC	7 cut(s)	110, 230, 586, 1073, 1231, 1417, 1485
ScrFI	CCNGG	8 cut(s)	108, 264, 384, 537, 735, 777, 1052, 1515
SduI	GDGCHC	1 cut(s)	499
SexAI	ACCWGGT	1 cut(s)	775
SfaNI	GCATC	2 cut(s)	739, 1363
SfcI	CTRYAG	1 cut(s)	297
SinI	GGWCC	6 cut(s)	110, 230, 586, 1073, 1231, 1417
SmiMI	CAYNNNNRTG	5 cut(s)	162, 192, 650, 1359, 1365
SmlI	CTYRAG	1 cut(s)	959
SmoI	CTYRAG	1 cut(s)	959
Sse9I	AATT	5 cut(s)	101, 476, 1017, 1216, 1399
SsiI	CCGC	4 cut(s)	14, 650, 1202, 1488
SspI	AATATT	1 cut(s)	432
SspMI	CTAG	3 cut(s)	390, 798, 1145
SstI	GAGCTC	1 cut(s)	499
StyD4I	CCNGG	8 cut(s)	106, 262, 382, 535, 733, 775, 1050, 1513
StyI	CCWWGG	3 cut(s)	209, 218, 744
TaiI	ACGT	1 cut(s)	346
TaqI	TCGA	3 cut(s)	708, 831, 1012
TasI	AATT	5 cut(s)	101, 476, 1017, 1216, 1399
TatI	WGTACW	1 cut(s)	861
TauI	GCSGC	1 cut(s)	1490
TfiI	GAWTC	4 cut(s)	214, 627, 1196, 1497
Tru1I	TTAA	5 cut(s)	93, 471, 921, 960, 1215
Tru9I	TTAA	5 cut(s)	93, 471, 921, 960, 1215
TscAI	CASTG	4 cut(s)	194, 337, 1228, 1465
TseFI	GTSAC	4 cut(s)	20, 339, 760, 1462
TseI	GCWGC	3 cut(s)	69, 794, 1094
Tsp45I	GTSAC	4 cut(s)	20, 339, 760, 1462
TspDTI	ATGAA	7 cut(s)	20, 146, 344, 432, 634, 1118, 1349
TspGWI	ACGGA	1 cut(s)	1310
TspRI	CASTG	4 cut(s)	194, 337, 1228, 1465
Van91I	CCANNNNNTGG	3 cut(s)	318, 646, 745
Vha464I	CTTAAG	1 cut(s)	959
VpaK11BI	GGWCC	6 cut(s)	110, 230, 586, 1073, 1231, 1417
XapI	RAATTY	3 cut(s)	101, 476, 1399
XceI	RCATGY	3 cut(s)	992, 1068, 1213
XcmI	CCANNNNNNNNNTGG	1 cut(s)	216
XmiI	GTMKAC	1 cut(s)	1137
XmnI	GAANNNNTTC	1 cut(s)	1018
XspI	CTAG	3 cut(s)	390, 798, 1145
Zsp2I	ATGCAT	1 cut(s)	1356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.