Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Forward (+)

56001132 .. 56003321

Gene Structure 2190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00122650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGAAGGTTTCCAGAATTACTCTGCATCTGCAACTTCTGGGGTTGTTATTGGCTGTTAATGGCTTCCTCCATTGCCAAGCTTGGCCAGCTCGTTACACCTTTGTGGTGGAAAACACTCCATACAAGAGATTCTGCAGCACAAAGAACATCTTGACTGTAAATGGCCAGTTTCCGGGACCGACTTTGTATGCTCACAAAGGAGACACTATCATCGTCGATGTCTTTAACAAAGGCAATCGTAACATTACTCTCCACTGGAGAGTGGTGGAAGGTAGATATTGGGAACCTTTAATACTTCCGACGCTTATCTCATCAATGGTCAACCTGGCGATCTATATCCATGCTCTAAATCAGGTGATGGTTGATTATGGCAAAACCTACCTACTGAGACTAATCAACTCCGGTCTGCAAGAGATTCTGTTTTTCGCCATCGCCAATCACAAAGTTACAGTTGTAGGGACAGATGCTAGCTACACCAAGCCTTTCACAACGGATTATGTCACCATCTCACCTGGTCAAACCATTGACCTTTTGCTCCATGCTAATCAGAGGCCTAACCACTACTACATGGCCGCTACAGTCTACGCAGGTGGCACTGTTCCTTATGATAACACCACCACAGCCCTACTACAATACACAAATCGGGGTTACACCCCTATTTCAACCCCTTTGTTTCCTGATCTTCCTGCTCACAATGACACTAATGCATTAGTTCATTTTAGTGATAGTCTCAGGAGCTTGGCTGATAAAAACCATCCCATCGACGTTCCACTAAAAATTACAACTCCCTTGTTTTATGCCGTCTCCGTCAACACGTTCCAGTGCCCCAATAATTCATGTGCTGGGCCTAATGGAACGCGTCTGGCCGCTAGTGTGAACAACATTAGCTTTGTGAACCCTAGCATTGACATACAACAAGCTTACTATTACCATGTCAACGGGGTATTTGGAACTCGGTTTCCAGATTTCCCGCCTTTGCTGTTTAACTTTACAGCGCAGTACTTGCCGCTGCACCTTCAGACCCCGAAACGAGGGACAGAGGTGCAGATACTGGAGTACAACGCGACAGTGGAGCTCGTGTTTCAGGGGACTAATTTGGTGGCAGGGGATGACCATCCAATGCATCTTCATGGTTACAGTTTCTATGTGGTTGGATTGGGGCTTGGGAACTTTGACAAGGATAAGGACCCTTTGAAATACAATCTTGTTGATCCTCCTCTTCAAAACACCATTGCTGTCCCTGTAAATGGGTGGACTACCATCAGATTCAAGGCTGACAATCCTGGAGTTTGGTTTATGCATTGCCATCTGGATAAGCATATGTCATGGGGCATGGATACGACATTCATAGTAAAAAATGGAAAGGGACCTAAAGCTCAAATCTTGCCTCCACCACCAGATATGCCACCTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

471

Amino Acids

52.71

Weight (kDa)

8.1

Isoelectric Point (pI)

33.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	36 - 87	1.3e-11	Multicopper oxidase
Cu-oxidase	PF00394	116 - 214	1.7e-25	Multicopper oxidase
Cu-oxidase_2	PF07731	323 - 454	1.1e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	578
Acc36I	ACCTGC	1 cut(s)	578
AccI	GTMKAC	1 cut(s)	582
AccII	CGCG	2 cut(s)	859, 1064
AciI	CCGC	4 cut(s)	573, 867, 971, 1007
AclWI	GGATC	1 cut(s)	1205
AcoI	YGGCCR	4 cut(s)	83, 163, 570, 864
AcuI	CTGAAG	1 cut(s)	1001
AfaI	GTAC	2 cut(s)	1001, 1058
AfiI	CCNNNNNNNGG	3 cut(s)	172, 1031, 1247
AflIII	ACRYGT	2 cut(s)	813, 857
AgsI	TTSAA	4 cut(s)	663, 1195, 1223, 1270
AjnI	CCWGG	3 cut(s)	324, 511, 1282
AleI	CACNNNNGTG	1 cut(s)	101
AloI	GAACNNNNNNTCC	2 cut(s)	943, 975
AluBI	AGCT	8 cut(s)	80, 89, 471, 738, 888, 920, 1075, 1376
AluI	AGCT	8 cut(s)	80, 89, 471, 738, 888, 920, 1075, 1376
Alw21I	GWGCWC	1 cut(s)	1077
Alw26I	GTCTC	4 cut(s)	195, 382, 734, 808
AlwI	GGATC	1 cut(s)	1205
AlwNI	CAGNNNCTG	1 cut(s)	1051
AoxI	GGCC	6 cut(s)	83, 163, 551, 570, 845, 864
ApeKI	GCWGC	2 cut(s)	135, 1009
AspLEI	GCGC	1 cut(s)	997
AspS9I	GGNCC	4 cut(s)	176, 845, 1186, 1367
AsuC2I	CCSGG	1 cut(s)	174
AsuHPI	GGTGA	3 cut(s)	367, 493, 501
AsuNHI	GCTAGC	1 cut(s)	467
AvaII	GGWCC	3 cut(s)	176, 1186, 1367
BaeGI	GKGCMC	1 cut(s)	827
BaeI	ACNNNNGTAYC	2 cut(s)	1040, 1073
BalI	TGGCCA	2 cut(s)	85, 165
BanII	GRGCYC	1 cut(s)	1077
BauI	CACGAG	1 cut(s)	1076
Bbv12I	GWGCWC	1 cut(s)	1077
BbvI	GCAGC	2 cut(s)	147, 996
BccI	CCATC	8 cut(s)	352, 437, 512, 762, 767, 1122, 1268, 1314
BceAI	ACGGC	1 cut(s)	785
BciT130I	CCWGG	3 cut(s)	326, 513, 1284
BciVI	GTATCC	1 cut(s)	1330
BcnI	CCSGG	1 cut(s)	174
BcoDI	GTCTC	4 cut(s)	195, 382, 734, 808
BfaI	CTAG	3 cut(s)	468, 870, 900
BfmI	CTRYAG	2 cut(s)	133, 576
BfuAI	ACCTGC	1 cut(s)	578
BfuI	GTATCC	1 cut(s)	1330
BisI	GCNGC	5 cut(s)	136, 573, 867, 1007, 1010
BlsI	GCNGC	5 cut(s)	137, 574, 868, 1008, 1011
BmcAI	AGTACT	1 cut(s)	1001
Bme1390I	CCNGG	4 cut(s)	174, 326, 513, 1284
Bme18I	GGWCC	3 cut(s)	176, 1186, 1367
BmgT120I	GGNCC	4 cut(s)	176, 845, 1186, 1367
BmiI	GGNNCC	4 cut(s)	177, 285, 1188, 1368
BmrFI	CCNGG	4 cut(s)	174, 326, 513, 1284
BmsI	GCATC	3 cut(s)	34, 454, 1132
BmtI	GCTAGC	1 cut(s)	471
BpmI	CTGGAG	3 cut(s)	277, 1073, 1305
BpuMI	CCSGG	1 cut(s)	174
BsaBI	GATNNNNATC	2 cut(s)	335, 1113
BsaWI	WCCGGW	1 cut(s)	401
BsaXI	ACNNNNNCTCC	2 cut(s)	1064, 1094
Bsc4I	CCNNNNNNNGG	3 cut(s)	172, 1031, 1247
Bse1I	ACTGG	4 cut(s)	166, 260, 820, 1056
Bse3DI	GCAATG	3 cut(s)	70, 1230, 1300
Bse8I	GATNNNNATC	2 cut(s)	335, 1113
BseBI	CCWGG	3 cut(s)	326, 513, 1284
BseGI	GGATG	3 cut(s)	754, 1114, 1114
BseJI	GATNNNNATC	2 cut(s)	335, 1113
BseLI	CCNNNNNNNGG	3 cut(s)	172, 1031, 1247
BseMI	GCAATG	3 cut(s)	70, 1230, 1300
BseMII	CTCAG	2 cut(s)	377, 745
BseNI	ACTGG	4 cut(s)	166, 260, 820, 1056
BseRI	GAGGAG	1 cut(s)	1206
BseSI	GKGCMC	1 cut(s)	827
BseXI	GCAGC	2 cut(s)	147, 996
BseYI	CCCAGC	1 cut(s)	842
BsgI	GTGCAG	2 cut(s)	995, 1064
Bsh1236I	CGCG	2 cut(s)	859, 1064
BshFI	GGCC	6 cut(s)	85, 165, 553, 572, 847, 866
BsiHKAI	GWGCWC	1 cut(s)	1077
BsiSI	CCGG	2 cut(s)	173, 402
BslFI	GGGAC	6 cut(s)	189, 472, 1048, 1102, 1223, 1380
BslI	CCNNNNNNNGG	3 cut(s)	172, 1031, 1247
BsmAI	GTCTC	4 cut(s)	195, 382, 734, 808
BsmBI	CGTCTC	1 cut(s)	808
BsmFI	GGGAC	6 cut(s)	189, 472, 1048, 1102, 1223, 1380
BsnI	GGCC	6 cut(s)	85, 165, 553, 572, 847, 866
Bsp1286I	GDGCHC	2 cut(s)	827, 1077
Bsp143I	GATC	3 cut(s)	330, 679, 1210
BspACI	CCGC	4 cut(s)	573, 867, 971, 1007
BspANI	GGCC	6 cut(s)	85, 165, 553, 572, 847, 866
BspCNI	CTCAG	2 cut(s)	378, 744
BspFNI	CGCG	2 cut(s)	859, 1064
BspLI	GGNNCC	4 cut(s)	177, 285, 1188, 1368
BspMAI	CTGCAG	1 cut(s)	137
BspMI	ACCTGC	1 cut(s)	578
BspOI	GCTAGC	1 cut(s)	471
BspPI	GGATC	1 cut(s)	1205
BsrDI	GCAATG	3 cut(s)	70, 1230, 1300
BsrI	ACTGG	4 cut(s)	166, 260, 820, 1056
BssMI	GATC	3 cut(s)	330, 679, 1210
BssSI	CACGAG	1 cut(s)	1076
Bst2BI	CACGAG	1 cut(s)	1076
Bst2UI	CCWGG	3 cut(s)	326, 513, 1284
Bst4CI	ACNGT	6 cut(s)	157, 451, 580, 598, 1069, 1139
Bst6I	CTCTTC	1 cut(s)	1224
BstAPI	GCANNNNNTGC	1 cut(s)	1003
BstC8I	GCNNGC	2 cut(s)	87, 469
BstDEI	CTNAG	2 cut(s)	386, 731
BstF5I	GGATG	3 cut(s)	754, 1114, 1114
BstFNI	CGCG	2 cut(s)	859, 1064
BstHHI	GCGC	1 cut(s)	997
BstKTI	GATC	3 cut(s)	333, 682, 1213
BstMAI	GTCTC	4 cut(s)	195, 382, 734, 808
BstMBI	GATC	3 cut(s)	330, 679, 1210
BstMWI	GCNNNNNNNGC	2 cut(s)	86, 1003
BstNI	CCWGG	3 cut(s)	326, 513, 1284
BstSCI	CCNGG	4 cut(s)	172, 324, 511, 1282
BstSFI	CTRYAG	2 cut(s)	133, 576
BstSLI	GKGCMC	1 cut(s)	827
BstUI	CGCG	2 cut(s)	859, 1064
BstV1I	GCAGC	2 cut(s)	147, 996
BsuI	GTATCC	1 cut(s)	1330
BsuRI	GGCC	6 cut(s)	85, 165, 553, 572, 847, 866
BtgZI	GCGATG	1 cut(s)	415
BtsCI	GGATG	3 cut(s)	754, 1114, 1114
BtsIMutI	CAGTG	4 cut(s)	253, 594, 827, 1074
BveI	ACCTGC	1 cut(s)	578
Cac8I	GCNNGC	2 cut(s)	87, 469
CaiI	CAGNNNCTG	1 cut(s)	1051
CfoI	GCGC	1 cut(s)	997
Cfr13I	GGNCC	4 cut(s)	176, 845, 1186, 1367
CseI	GACGC	2 cut(s)	310, 848
CsiI	ACCWGGT	1 cut(s)	511
Csp6I	GTAC	2 cut(s)	1000, 1057
CviAII	CATG	8 cut(s)	341, 539, 568, 837, 932, 1130, 1326, 1333
CviQI	GTAC	2 cut(s)	1000, 1057
DdeI	CTNAG	2 cut(s)	386, 731
DpnI	GATC	3 cut(s)	332, 681, 1212
DpnII	GATC	3 cut(s)	330, 679, 1210
EaeI	YGGCCR	4 cut(s)	83, 163, 570, 864
Eam1104I	CTCTTC	1 cut(s)	1224
EarI	CTCTTC	1 cut(s)	1224
Ecl136II	GAGCTC	1 cut(s)	1075
Eco147I	AGGCCT	1 cut(s)	553
Eco24I	GRGCYC	1 cut(s)	1077
Eco47I	GGWCC	3 cut(s)	176, 1186, 1367
Eco53kI	GAGCTC	1 cut(s)	1075
Eco57I	CTGAAG	1 cut(s)	1001
EcoICRI	GAGCTC	1 cut(s)	1075
EcoO109I	RGGNCCY	2 cut(s)	1186, 1367
EcoRII	CCWGG	3 cut(s)	324, 511, 1282
EcoT22I	ATGCAT	3 cut(s)	709, 1125, 1302
EcoT38I	GRGCYC	1 cut(s)	1077
Esp3I	CGTCTC	1 cut(s)	808
FaeI	CATG	8 cut(s)	344, 542, 571, 840, 935, 1133, 1329, 1336
FalI	AAGNNNNNCTT	2 cut(s)	134, 166
FaqI	GGGAC	6 cut(s)	189, 472, 1048, 1102, 1223, 1380
FatI	CATG	8 cut(s)	340, 538, 567, 836, 931, 1129, 1325, 1332
FauI	CCCGC	1 cut(s)	978
FauNDI	CATATG	1 cut(s)	1320
FblI	GTMKAC	1 cut(s)	582
Fnu4HI	GCNGC	5 cut(s)	136, 573, 867, 1007, 1010
FokI	GGATG	3 cut(s)	741, 1101, 1121
FriOI	GRGCYC	1 cut(s)	1077
Fsp4HI	GCNGC	5 cut(s)	136, 573, 867, 1007, 1010
FspBI	CTAG	3 cut(s)	468, 870, 900
GlaI	GCGC	1 cut(s)	996
GluI	GCNGC	5 cut(s)	136, 573, 867, 1007, 1010
GsaI	CCCAGC	1 cut(s)	846
GsuI	CTGGAG	3 cut(s)	277, 1073, 1305
HaeIII	GGCC	6 cut(s)	85, 165, 553, 572, 847, 866
HapII	CCGG	2 cut(s)	173, 402
HgaI	GACGC	2 cut(s)	310, 848
HhaI	GCGC	1 cut(s)	997
Hin1II	CATG	8 cut(s)	344, 542, 571, 840, 935, 1133, 1329, 1336
Hin6I	GCGC	1 cut(s)	995
HinP1I	GCGC	1 cut(s)	995
HincII	GTYRAC	3 cut(s)	322, 811, 937
HindII	GTYRAC	3 cut(s)	322, 811, 937
HindIII	AAGCTT	2 cut(s)	78, 918
HinfI	GANTC	3 cut(s)	129, 415, 1266
HpaII	CCGG	2 cut(s)	173, 402
HphI	GGTGA	3 cut(s)	367, 493, 501
Hpy166II	GTNNAC	7 cut(s)	322, 583, 811, 877, 895, 937, 1254
Hpy188I	TCNGA	4 cut(s)	300, 549, 1020, 1265
Hpy188III	TCNNGA	6 cut(s)	12, 151, 677, 733, 962, 1310
Hpy8I	GTNNAC	7 cut(s)	322, 583, 811, 877, 895, 937, 1254
Hpy99I	CGWCG	3 cut(s)	218, 304, 767
HpyAV	CCTTC	2 cut(s)	263, 1025
HpyCH4III	ACNGT	6 cut(s)	157, 451, 580, 598, 1069, 1139
HpyCH4IV	ACGT	2 cut(s)	765, 815
HpyCH4V	TGCA	9 cut(s)	25, 31, 135, 409, 707, 1012, 1045, 1123, 1300
HpyF10VI	GCNNNNNNNGC	2 cut(s)	86, 1003
HpyF3I	CTNAG	2 cut(s)	386, 731
HpySE526I	ACGT	2 cut(s)	765, 815
Hsp92II	CATG	8 cut(s)	344, 542, 571, 840, 935, 1133, 1329, 1336
HspAI	GCGC	1 cut(s)	995
Kzo9I	GATC	3 cut(s)	330, 679, 1210
LmnI	GCTCC	3 cut(s)	540, 735, 1072
Lsp1109I	GCAGC	2 cut(s)	147, 996
LweI	GCATC	3 cut(s)	34, 454, 1132
MabI	ACCWGGT	1 cut(s)	511
MaeI	CTAG	3 cut(s)	468, 870, 900
MaeII	ACGT	2 cut(s)	765, 815
MaeIII	GTNAC	6 cut(s)	92, 239, 445, 499, 647, 1133
MalI	GATC	3 cut(s)	332, 681, 1212
MboI	GATC	3 cut(s)	330, 679, 1210
MboII	GAAGA	3 cut(s)	674, 1118, 1211
MhlI	GDGCHC	2 cut(s)	827, 1077
MlsI	TGGCCA	2 cut(s)	85, 165
MluCI	AATT	4 cut(s)	15, 777, 832, 1093
MluI	ACGCGT	1 cut(s)	857
MluNI	TGGCCA	2 cut(s)	85, 165
MmeI	TCCRAC	2 cut(s)	323, 1132
MnlI	CCTC	7 cut(s)	77, 543, 1025, 1033, 1224, 1227, 1398
Mox20I	TGGCCA	2 cut(s)	85, 165
Mph1103I	ATGCAT	3 cut(s)	709, 1125, 1302
MscI	TGGCCA	2 cut(s)	85, 165
MseI	TTAA	4 cut(s)	57, 225, 290, 984
MslI	CAYNNNNRTG	3 cut(s)	101, 720, 1128
Msp20I	TGGCCA	2 cut(s)	85, 165
MspA1I	CMGCKG	1 cut(s)	1009
MspI	CCGG	2 cut(s)	173, 402
MspR9I	CCNGG	4 cut(s)	174, 326, 513, 1284
MvaI	CCWGG	3 cut(s)	326, 513, 1284
MvnI	CGCG	2 cut(s)	859, 1064
MwoI	GCNNNNNNNGC	2 cut(s)	86, 1003
NciI	CCSGG	1 cut(s)	174
NdeI	CATATG	1 cut(s)	1320
NdeII	GATC	3 cut(s)	330, 679, 1210
NheI	GCTAGC	1 cut(s)	467
NlaIII	CATG	8 cut(s)	344, 542, 571, 840, 935, 1133, 1329, 1336
NlaIV	GGNNCC	4 cut(s)	177, 285, 1188, 1368
NmuCI	GTSAC	1 cut(s)	499
NsiI	ATGCAT	3 cut(s)	709, 1125, 1302
OliI	CACNNNNGTG	1 cut(s)	101
PaqCI	CACCTGC	1 cut(s)	578
PceI	AGGCCT	1 cut(s)	553
PfeI	GAWTC	3 cut(s)	129, 415, 1266
PfoI	TCCNGGA	2 cut(s)	172, 1282
PkrI	GCNGC	5 cut(s)	137, 574, 868, 1008, 1011
PpuMI	RGGWCCY	2 cut(s)	1186, 1367
Psp124BI	GAGCTC	1 cut(s)	1077
Psp5II	RGGWCCY	2 cut(s)	1186, 1367
Psp6I	CCWGG	3 cut(s)	324, 511, 1282
PspFI	CCCAGC	1 cut(s)	842
PspGI	CCWGG	3 cut(s)	324, 511, 1282
PspN4I	GGNNCC	4 cut(s)	177, 285, 1188, 1368
PspPI	GGNCC	4 cut(s)	176, 845, 1186, 1367
PspPPI	RGGWCCY	2 cut(s)	1186, 1367
PsrI	GAACNNNNNNTAC	2 cut(s)	276, 308
PstI	CTGCAG	1 cut(s)	137
PstNI	CAGNNNCTG	1 cut(s)	1051
RsaI	GTAC	2 cut(s)	1001, 1058
RsaNI	GTAC	2 cut(s)	1000, 1057
RseI	CAYNNNNRTG	3 cut(s)	101, 720, 1128
SacI	GAGCTC	1 cut(s)	1077
SaqAI	TTAA	4 cut(s)	57, 225, 290, 984
SatI	GCNGC	5 cut(s)	136, 573, 867, 1007, 1010
Sau3AI	GATC	3 cut(s)	330, 679, 1210
Sau96I	GGNCC	4 cut(s)	176, 845, 1186, 1367
ScaI	AGTACT	1 cut(s)	1001
ScrFI	CCNGG	4 cut(s)	174, 326, 513, 1284
SduI	GDGCHC	2 cut(s)	827, 1077
SexAI	ACCWGGT	1 cut(s)	511
SfaNI	GCATC	3 cut(s)	34, 454, 1132
SfcI	CTRYAG	2 cut(s)	133, 576
SinI	GGWCC	3 cut(s)	176, 1186, 1367
SmiMI	CAYNNNNRTG	3 cut(s)	101, 720, 1128
Sse9I	AATT	4 cut(s)	15, 777, 832, 1093
SseBI	AGGCCT	1 cut(s)	553
SsiI	CCGC	4 cut(s)	573, 867, 971, 1007
SspMI	CTAG	3 cut(s)	468, 870, 900
SstI	GAGCTC	1 cut(s)	1077
StuI	AGGCCT	1 cut(s)	553
StyD4I	CCNGG	4 cut(s)	172, 324, 511, 1282
TaaI	ACNGT	6 cut(s)	157, 451, 580, 598, 1069, 1139
TaiI	ACGT	2 cut(s)	768, 818
TaqI	TCGA	2 cut(s)	216, 762
TaqII	GACCGA	1 cut(s)	193
TasI	AATT	4 cut(s)	15, 777, 832, 1093
TatI	WGTACW	2 cut(s)	999, 1056
TauI	GCSGC	3 cut(s)	575, 869, 1009
TfiI	GAWTC	3 cut(s)	129, 415, 1266
Tru1I	TTAA	4 cut(s)	57, 225, 290, 984
Tru9I	TTAA	4 cut(s)	57, 225, 290, 984
TscAI	CASTG	4 cut(s)	260, 601, 827, 1074
TseFI	GTSAC	1 cut(s)	499
TseI	GCWGC	2 cut(s)	135, 1009
Tsp45I	GTSAC	1 cut(s)	499
TspDTI	ATGAA	5 cut(s)	17, 704, 825, 1118, 1336
TspGWI	ACGGA	2 cut(s)	506, 796
TspRI	CASTG	4 cut(s)	260, 601, 827, 1074
VpaK11BI	GGWCC	3 cut(s)	176, 1186, 1367
XmiI	GTMKAC	1 cut(s)	582
XspI	CTAG	3 cut(s)	468, 870, 900
ZrmI	AGTACT	1 cut(s)	1001
Zsp2I	ATGCAT	3 cut(s)	709, 1125, 1302

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.