Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Reverse (-)

12101106 .. 12104360

Gene Structure 3255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG078700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGCAGGTGAATGAAGCTACATATACAAGGCTGTGCAGCACTAAAAAGATATTGACTGTTAATGGAAAATTTCCCGGACCAGTTTTACGAGCTTATAGAGGAGATACAATCTATGTCAATGTTCATAACGGAGGCAGATACAATATCACCATTCACTGGCATGGAGTAAGCCAACCAAGGAATCCATGGTCTGATGGTCCGGAATACATCACACAATGTCCTATTCAACCTGGGGGAAGTTTCAAACAAAAGATCATATTTTCTACAGAAGAAGGTACCATTTGGTGGCACGCTCACAGTGATTGGTCACGTGCGACAGTTCATGGAGCAATCTATGTCTATCCAAGGCCAGGAACTAGCTACCCTTTTCCCAAGCCCCATGATGAAGTTCCCATAATATTAGGTGAGTGGTGGAAGCAAGATGTAATGGAGGTACTCACTGAATTTGTTAGAACCGGAGACACTCCAATTACCTCTGACGCATACACCATAAATGGTCAACCTGGAGACCTCTATCCTTGCTCAAAATCAGATACATTCAAACTCTCTGTGGACCAAAACAAGACCTACTTGCTCCGAATAATCCACGCAGGAATGAACGAGATCATGTTCCTGGCGGTGGAAAACCATAAACTCACGGTGGTCGCGACAGACGCAAGCTACACGAAGCCAATCGAAAGGGACTACATCGCAATAGCTCCTGGCCAATCCATGGATGCCTTGTTGGTCACGAACCAACAACCTGGTCGCTATTACATGGCTGCTAGGGCATACCAGGGTAACTCTGTGATTCCTTTCGACAACACCACCACCACAGCGATAGTTGAGTACAATAATGGAAATCATAATGAGAATGATACTCCATTACTTCCTTACCTTCCTCCCTTTAATGACACAGAAAGAGCCTTTGGCTTTTTCACTAGCCTTAAGAGCCTACCCGTTGAGTTCAAACAGCATGTCCCGAAAACTATCACAACTCGAATAATTTCAACAGTTTCACTCAACACATTCCCTTGCCAGGGAAATCAAACCTGTCAAGGACCCAACGGGACCCGATTAGGTGCCAGTATGAACAACATAAGCTTTGTGGGGCCAGATACAGTAGACATATTAGAAGCTTACTACTACTATATCAATGGAGTCTTCAACAAGGGTTTTCCAGATTCTCCGCCGTACGTGTTTAATTTCACTGCTCAGGACCTGCCTCTGATTTTGCAAATACCAAATAGGGGGACGAAGGTGAAGATTTTGGAATATGGGACGGATGTGGAAGTTGTATATCAAAATACAAACTTAGTGGCTGGGATAGATCATCCTATGCATCTACATGGGTATGACTTCCACATAGTTGGAAATGGCTTTGGAAATTTTGATGAAGAAAAGGACCCATTGAACTACAATCTTGTTGATCCCCCTCTTAGGAACACTGTCAATGTCCCCATAGGTGGTTGGGCTGCAATGAGATTCAAGGCCACAAATCCTGGAGTATGGTTTTTGCACTGCCATTTGGAGCGTCACCTAACATGGGGAATGGAAACGGTTTTTATTGTGAAGAATGGGAAATACAAGAAGGAAAGGTTGCTGCCTCCTCCACCGGATATGCCTCCGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

537

Amino Acids

60.55

Weight (kDa)

6.31

Isoelectric Point (pI)

27.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	3 - 116	6.4e-38	Multicopper oxidase
Cu-oxidase	PF00394	129 - 279	2.9e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	388 - 520	7.7e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1209
Acc65I	GGTACC	1 cut(s)	275
AccB1I	GGYRCC	2 cut(s)	275, 1061
AccB7I	CCANNNNNTGG	3 cut(s)	156, 285, 712
AccI	GTMKAC	1 cut(s)	1104
AccII	CGCG	1 cut(s)	647
AccIII	TCCGGA	1 cut(s)	199
AciI	CCGC	2 cut(s)	617, 1169
AclWI	GGATC	1 cut(s)	1403
AcoI	YGGCCR	1 cut(s)	703
AcsI	RAATTY	3 cut(s)	68, 443, 1366
AcvI	CACGTG	1 cut(s)	311
AfaI	GTAC	4 cut(s)	277, 435, 830, 1175
AflII	CTTAAG	1 cut(s)	926
AflIII	ACRYGT	1 cut(s)	1176
AgsI	TTSAA	8 cut(s)	227, 244, 541, 949, 990, 1147, 1393, 1468
AjnI	CCWGG	9 cut(s)	229, 349, 502, 612, 700, 742, 774, 1017, 1480
AjuI	GAANNNNNNNTTGG	2 cut(s)	891, 923
AluBI	AGCT	7 cut(s)	17, 92, 360, 660, 698, 1083, 1118
AluI	AGCT	7 cut(s)	17, 92, 360, 660, 698, 1083, 1118
Alw26I	GTCTC	2 cut(s)	453, 501
AlwI	GGATC	1 cut(s)	1403
AlwNI	CAGNNNCTG	1 cut(s)	1201
Aor13HI	TCCGGA	1 cut(s)	199
AoxI	GGCC	4 cut(s)	347, 703, 1091, 1470
ApeKI	GCWGC	4 cut(s)	36, 761, 1454, 1582
ApoI	RAATTY	3 cut(s)	68, 443, 1366
ArsI	GACNNNNNNTTYG	2 cut(s)	942, 974
Asp700I	GAANNNNTTC	1 cut(s)	985
Asp718I	GGTACC	1 cut(s)	275
AspS9I	GGNCC	8 cut(s)	77, 197, 553, 1040, 1050, 1091, 1198, 1384
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	5 cut(s)	19, 139, 416, 1252, 1508
AvaII	GGWCC	7 cut(s)	77, 197, 553, 1040, 1050, 1198, 1384
BalI	TGGCCA	1 cut(s)	705
BanI	GGYRCC	2 cut(s)	275, 1061
BbrPI	CACGTG	1 cut(s)	311
BbsI	GAAGAC	1 cut(s)	1135
BbvI	GCAGC	4 cut(s)	48, 748, 1441, 1569
BccI	CCATC	1 cut(s)	188
BceAI	ACGGC	1 cut(s)	1156
BciT130I	CCWGG	9 cut(s)	231, 351, 504, 614, 702, 744, 776, 1019, 1482
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	2 cut(s)	453, 501
BfaI	CTAG	3 cut(s)	357, 765, 921
BfmI	CTRYAG	1 cut(s)	264
BfrI	CTTAAG	1 cut(s)	926
BfuAI	ACCTGC	1 cut(s)	1209
BisI	GCNGC	4 cut(s)	37, 762, 1455, 1583
BlsI	GCNGC	4 cut(s)	38, 763, 1456, 1584
Bme18I	GGWCC	7 cut(s)	77, 197, 553, 1040, 1050, 1198, 1384
BmgT120I	GGNCC	8 cut(s)	77, 197, 553, 1040, 1050, 1091, 1198, 1384
BmiI	GGNNCC	7 cut(s)	277, 1042, 1051, 1052, 1063, 1092, 1386
BmsI	GCATC	2 cut(s)	706, 1330
BpiI	GAAGAC	1 cut(s)	1135
BpmI	CTGGAG	2 cut(s)	525, 1503
Bpu10I	CCTNAGC	1 cut(s)	1194
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	2 cut(s)	311, 1177
BsaI	GGTCTC	1 cut(s)	501
BsaJI	CCNNGG	7 cut(s)	176, 185, 230, 344, 711, 775, 1018
BsaWI	WCCGGW	3 cut(s)	199, 455, 1594
Bse1I	ACTGG	3 cut(s)	80, 161, 1065
Bse3DI	GCAATG	1 cut(s)	1464
BseAI	TCCGGA	1 cut(s)	199
BseBI	CCWGG	9 cut(s)	231, 351, 504, 614, 702, 744, 776, 1019, 1482
BseDI	CCNNGG	7 cut(s)	176, 185, 230, 344, 711, 775, 1018
BseGI	GGATG	3 cut(s)	721, 1270, 1312
BseMI	GCAATG	1 cut(s)	1464
BseMII	CTCAG	1 cut(s)	1208
BseNI	ACTGG	3 cut(s)	80, 161, 1065
BseRI	GAGGAG	2 cut(s)	114, 1578
BseXI	GCAGC	4 cut(s)	48, 748, 1441, 1569
BseYI	CCCAGC	1 cut(s)	1301
BsgI	GTGCAG	1 cut(s)	55
Bsh1236I	CGCG	1 cut(s)	647
BshFI	GGCC	4 cut(s)	349, 705, 1093, 1472
BshNI	GGYRCC	2 cut(s)	275, 1061
BsiSI	CCGG	4 cut(s)	75, 200, 456, 1595
BsiWI	CGTACG	1 cut(s)	1173
BslFI	GGGAC	6 cut(s)	695, 944, 1063, 1246, 1273, 1421
BsmAI	GTCTC	2 cut(s)	453, 501
BsmFI	GGGAC	6 cut(s)	695, 944, 1063, 1246, 1273, 1421
BsnI	GGCC	4 cut(s)	349, 705, 1093, 1472
Bso31I	GGTCTC	1 cut(s)	501
Bsp13I	TCCGGA	1 cut(s)	199
Bsp143I	GATC	4 cut(s)	252, 603, 1309, 1408
Bsp19I	CCATGG	2 cut(s)	185, 711
Bsp68I	TCGCGA	1 cut(s)	647
BspACI	CCGC	2 cut(s)	617, 1169
BspANI	GGCC	4 cut(s)	349, 705, 1093, 1472
BspCNI	CTCAG	1 cut(s)	1207
BspEI	TCCGGA	1 cut(s)	199
BspFNI	CGCG	1 cut(s)	647
BspLI	GGNNCC	7 cut(s)	277, 1042, 1051, 1052, 1063, 1092, 1386
BspMI	ACCTGC	1 cut(s)	1209
BspPI	GGATC	1 cut(s)	1403
BspT107I	GGYRCC	2 cut(s)	275, 1061
BspTI	CTTAAG	1 cut(s)	926
BspTNI	GGTCTC	1 cut(s)	501
BsrDI	GCAATG	1 cut(s)	1464
BsrI	ACTGG	3 cut(s)	80, 161, 1065
BssECI	CCNNGG	7 cut(s)	176, 185, 230, 344, 711, 775, 1018
BssMI	GATC	4 cut(s)	252, 603, 1309, 1408
BssT1I	CCWWGG	4 cut(s)	176, 185, 344, 711
Bst2UI	CCWGG	9 cut(s)	231, 351, 504, 614, 702, 744, 776, 1019, 1482
Bst4CI	ACNGT	8 cut(s)	58, 299, 319, 640, 994, 1102, 1429, 1540
BstAFI	CTTAAG	1 cut(s)	926
BstBAI	YACGTR	2 cut(s)	311, 1177
BstC8I	GCNNGC	2 cut(s)	291, 658
BstDEI	CTNAG	3 cut(s)	1194, 1294, 1418
BstDSI	CCRYGG	2 cut(s)	185, 711
BstF5I	GGATG	3 cut(s)	721, 1270, 1312
BstFNI	CGCG	1 cut(s)	647
BstKTI	GATC	4 cut(s)	255, 606, 1312, 1411
BstMAI	GTCTC	2 cut(s)	453, 501
BstMBI	GATC	4 cut(s)	252, 603, 1309, 1408
BstMWI	GCNNNNNNNGC	3 cut(s)	653, 767, 930
BstNI	CCWGG	9 cut(s)	231, 351, 504, 614, 702, 744, 776, 1019, 1482
BstNSI	RCATGY	1 cut(s)	959
BstSFI	CTRYAG	1 cut(s)	264
BstUI	CGCG	1 cut(s)	647
BstV1I	GCAGC	4 cut(s)	48, 748, 1441, 1569
BstV2I	GAAGAC	1 cut(s)	1135
BstXI	CCANNNNNNTGG	2 cut(s)	743, 1349
BsuRI	GGCC	4 cut(s)	349, 705, 1093, 1472
BtgI	CCRYGG	2 cut(s)	185, 711
BtgZI	GCGATG	1 cut(s)	673
BtsCI	GGATG	3 cut(s)	721, 1270, 1312
BtsI	GCAGTG	2 cut(s)	1188, 1498
BtsIMutI	CAGTG	6 cut(s)	154, 304, 438, 1188, 1425, 1498
BtuMI	TCGCGA	1 cut(s)	647
BveI	ACCTGC	1 cut(s)	1209
Cac8I	GCNNGC	2 cut(s)	291, 658
CaiI	CAGNNNCTG	1 cut(s)	1201
Cfr13I	GGNCC	8 cut(s)	77, 197, 553, 1040, 1050, 1091, 1198, 1384
CseI	GACGC	3 cut(s)	488, 662, 1502
CsiI	ACCWGGT	1 cut(s)	742
Csp6I	GTAC	4 cut(s)	276, 434, 829, 1174
CspCI	CAANNNNNGTGG	2 cut(s)	1278, 1313
CviQI	GTAC	4 cut(s)	276, 434, 829, 1174
DdeI	CTNAG	3 cut(s)	1194, 1294, 1418
DpnI	GATC	4 cut(s)	254, 605, 1311, 1410
DpnII	GATC	4 cut(s)	252, 603, 1309, 1408
EaeI	YGGCCR	1 cut(s)	703
EciI	GGCGGA	1 cut(s)	1158
Eco130I	CCWWGG	4 cut(s)	176, 185, 344, 711
Eco31I	GGTCTC	1 cut(s)	501
Eco47I	GGWCC	7 cut(s)	77, 197, 553, 1040, 1050, 1198, 1384
Eco72I	CACGTG	1 cut(s)	311
EcoO109I	RGGNCCY	4 cut(s)	1040, 1050, 1198, 1384
EcoRII	CCWGG	9 cut(s)	229, 349, 502, 612, 700, 742, 774, 1017, 1480
EcoT14I	CCWWGG	4 cut(s)	176, 185, 344, 711
EcoT22I	ATGCAT	1 cut(s)	1323
ErhI	CCWWGG	4 cut(s)	176, 185, 344, 711
FalI	AAGNNNNNCTT	2 cut(s)	554, 586
FaqI	GGGAC	6 cut(s)	695, 944, 1063, 1246, 1273, 1421
FblI	GTMKAC	1 cut(s)	1104
Fnu4HI	GCNGC	4 cut(s)	37, 762, 1455, 1583
FokI	GGATG	3 cut(s)	728, 1277, 1299
Fsp4HI	GCNGC	4 cut(s)	37, 762, 1455, 1583
FspBI	CTAG	3 cut(s)	357, 765, 921
GluI	GCNGC	4 cut(s)	37, 762, 1455, 1583
GsaI	CCCAGC	1 cut(s)	1305
GsuI	CTGGAG	2 cut(s)	525, 1503
HaeIII	GGCC	4 cut(s)	349, 705, 1093, 1472
HapII	CCGG	4 cut(s)	75, 200, 456, 1595
HgaI	GACGC	3 cut(s)	488, 662, 1502
HincII	GTYRAC	1 cut(s)	500
HindII	GTYRAC	1 cut(s)	500
HindIII	AAGCTT	2 cut(s)	1081, 1116
HinfI	GANTC	5 cut(s)	181, 790, 1140, 1163, 1464
HpaII	CCGG	4 cut(s)	75, 200, 456, 1595
HphI	GGTGA	5 cut(s)	19, 139, 416, 1252, 1508
Hpy166II	GTNNAC	3 cut(s)	500, 553, 1105
Hpy188I	TCNGA	5 cut(s)	193, 478, 532, 578, 1209
Hpy188III	TCNNGA	6 cut(s)	200, 646, 730, 961, 1160, 1196
Hpy8I	GTNNAC	3 cut(s)	500, 553, 1105
HpyAV	CCTTC	4 cut(s)	266, 887, 1231, 1564
HpyCH4III	ACNGT	8 cut(s)	58, 299, 319, 640, 994, 1102, 1429, 1540
HpyCH4IV	ACGT	2 cut(s)	310, 1176
HpyCH4V	TGCA	6 cut(s)	4, 36, 1216, 1321, 1457, 1498
HpyF10VI	GCNNNNNNNGC	3 cut(s)	653, 767, 930
HpyF3I	CTNAG	3 cut(s)	1194, 1294, 1418
HpySE526I	ACGT	2 cut(s)	310, 1176
KflI	GGGWCCC	1 cut(s)	1050
Kpn2I	TCCGGA	1 cut(s)	199
KpnI	GGTACC	1 cut(s)	279
Kzo9I	GATC	4 cut(s)	252, 603, 1309, 1408
LmnI	GCTCC	4 cut(s)	326, 579, 703, 1510
Lsp1109I	GCAGC	4 cut(s)	48, 748, 1441, 1569
LweI	GCATC	2 cut(s)	706, 1330
MabI	ACCWGGT	1 cut(s)	742
MaeI	CTAG	3 cut(s)	357, 765, 921
MaeII	ACGT	2 cut(s)	310, 1176
MaeIII	GTNAC	4 cut(s)	306, 727, 779, 1514
MalI	GATC	4 cut(s)	254, 605, 1311, 1410
MboI	GATC	4 cut(s)	252, 603, 1309, 1408
MboII	GAAGA	5 cut(s)	281, 1135, 1255, 1388, 1564
MlsI	TGGCCA	1 cut(s)	705
MluCI	AATT	6 cut(s)	68, 443, 468, 984, 1183, 1366
MluNI	TGGCCA	1 cut(s)	705
MlyI	GAGTC	1 cut(s)	1149
MmeI	TCCRAC	1 cut(s)	1330
Mox20I	TGGCCA	1 cut(s)	705
Mph1103I	ATGCAT	1 cut(s)	1323
MroI	TCCGGA	1 cut(s)	199
MroXI	GAANNNNTTC	1 cut(s)	985
MscI	TGGCCA	1 cut(s)	705
MseI	TTAA	5 cut(s)	60, 888, 927, 1182, 1612
MslI	CAYNNNNRTG	3 cut(s)	159, 1326, 1332
Msp20I	TGGCCA	1 cut(s)	705
MspCI	CTTAAG	1 cut(s)	926
MspI	CCGG	4 cut(s)	75, 200, 456, 1595
MvaI	CCWGG	9 cut(s)	231, 351, 504, 614, 702, 744, 776, 1019, 1482
MvnI	CGCG	1 cut(s)	647
MwoI	GCNNNNNNNGC	3 cut(s)	653, 767, 930
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	2 cut(s)	185, 711
NdeII	GATC	4 cut(s)	252, 603, 1309, 1408
NlaIV	GGNNCC	7 cut(s)	277, 1042, 1051, 1052, 1063, 1092, 1386
NmuCI	GTSAC	3 cut(s)	306, 727, 1514
NruI	TCGCGA	1 cut(s)	647
NsiI	ATGCAT	1 cut(s)	1323
NspI	RCATGY	1 cut(s)	959
PcsI	WCGNNNNNNNCGW	1 cut(s)	644
PdmI	GAANNNNTTC	1 cut(s)	985
PfeI	GAWTC	4 cut(s)	181, 790, 1163, 1464
Pfl23II	CGTACG	1 cut(s)	1173
PflMI	CCANNNNNTGG	3 cut(s)	156, 285, 712
PfoI	TCCNGGA	2 cut(s)	73, 1480
PkrI	GCNGC	4 cut(s)	38, 763, 1456, 1584
PleI	GAGTC	1 cut(s)	1148
PmaCI	CACGTG	1 cut(s)	311
PmlI	CACGTG	1 cut(s)	311
PpsI	GAGTC	1 cut(s)	1148
Ppu21I	YACGTR	2 cut(s)	311, 1177
PpuMI	RGGWCCY	4 cut(s)	1040, 1050, 1198, 1384
Psp5II	RGGWCCY	4 cut(s)	1040, 1050, 1198, 1384
Psp6I	CCWGG	9 cut(s)	229, 349, 502, 612, 700, 742, 774, 1017, 1480
PspCI	CACGTG	1 cut(s)	311
PspFI	CCCAGC	1 cut(s)	1301
PspGI	CCWGG	9 cut(s)	229, 349, 502, 612, 700, 742, 774, 1017, 1480
PspLI	CGTACG	1 cut(s)	1173
PspN4I	GGNNCC	7 cut(s)	277, 1042, 1051, 1052, 1063, 1092, 1386
PspPI	GGNCC	8 cut(s)	77, 197, 553, 1040, 1050, 1091, 1198, 1384
PspPPI	RGGWCCY	4 cut(s)	1040, 1050, 1198, 1384
PstNI	CAGNNNCTG	1 cut(s)	1201
RruI	TCGCGA	1 cut(s)	647
RsaI	GTAC	4 cut(s)	277, 435, 830, 1175
RsaNI	GTAC	4 cut(s)	276, 434, 829, 1174
RseI	CAYNNNNRTG	3 cut(s)	159, 1326, 1332
SaqAI	TTAA	5 cut(s)	60, 888, 927, 1182, 1612
SatI	GCNGC	4 cut(s)	37, 762, 1455, 1583
Sau3AI	GATC	4 cut(s)	252, 603, 1309, 1408
Sau96I	GGNCC	8 cut(s)	77, 197, 553, 1040, 1050, 1091, 1198, 1384
SchI	GAGTC	1 cut(s)	1149
SexAI	ACCWGGT	1 cut(s)	742
SfaNI	GCATC	2 cut(s)	706, 1330
SfcI	CTRYAG	1 cut(s)	264
SinI	GGWCC	7 cut(s)	77, 197, 553, 1040, 1050, 1198, 1384
SmiMI	CAYNNNNRTG	3 cut(s)	159, 1326, 1332
SmlI	CTYRAG	1 cut(s)	926
SmoI	CTYRAG	1 cut(s)	926
Sse9I	AATT	6 cut(s)	68, 443, 468, 984, 1183, 1366
SsiI	CCGC	2 cut(s)	617, 1169
SspI	AATATT	1 cut(s)	399
SspMI	CTAG	3 cut(s)	357, 765, 921
StyI	CCWWGG	4 cut(s)	176, 185, 344, 711
TaaI	ACNGT	8 cut(s)	58, 299, 319, 640, 994, 1102, 1429, 1540
TaiI	ACGT	2 cut(s)	313, 1179
TaqI	TCGA	3 cut(s)	675, 798, 979
TasI	AATT	6 cut(s)	68, 443, 468, 984, 1183, 1366
TatI	WGTACW	1 cut(s)	828
TfiI	GAWTC	4 cut(s)	181, 790, 1163, 1464
Tru1I	TTAA	5 cut(s)	60, 888, 927, 1182, 1612
Tru9I	TTAA	5 cut(s)	60, 888, 927, 1182, 1612
TscAI	CASTG	6 cut(s)	161, 304, 445, 1195, 1432, 1505
TseFI	GTSAC	3 cut(s)	306, 727, 1514
TseI	GCWGC	4 cut(s)	36, 761, 1454, 1582
Tsp45I	GTSAC	3 cut(s)	306, 727, 1514
TspDTI	ATGAA	7 cut(s)	27, 113, 311, 399, 611, 1085, 1389
TspGWI	ACGGA	3 cut(s)	144, 1277, 1596
TspRI	CASTG	6 cut(s)	161, 304, 445, 1195, 1432, 1505
Van91I	CCANNNNNTGG	3 cut(s)	156, 285, 712
Vha464I	CTTAAG	1 cut(s)	926
VpaK11BI	GGWCC	7 cut(s)	77, 197, 553, 1040, 1050, 1198, 1384
XapI	RAATTY	3 cut(s)	68, 443, 1366
XceI	RCATGY	1 cut(s)	959
XcmI	CCANNNNNNNNNTGG	1 cut(s)	183
XmiI	GTMKAC	1 cut(s)	1104
XmnI	GAANNNNTTC	1 cut(s)	985
XspI	CTAG	3 cut(s)	357, 765, 921
Zsp2I	ATGCAT	1 cut(s)	1323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.