Lignin degradation and detoxification of lignin-derived products
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 783 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 286 |
| AccI | GTMKAC | 1 cut(s) | 678 |
| AccII | CGCG | 1 cut(s) | 221 |
| AciI | CCGC | 2 cut(s) | 191, 743 |
| AclWI | GGATC | 1 cut(s) | 977 |
| AcoI | YGGCCR | 1 cut(s) | 277 |
| AcsI | RAATTY | 2 cut(s) | 17, 940 |
| AfaI | GTAC | 3 cut(s) | 9, 404, 749 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 193, 286, 592, 593, 803, 993, 1019 |
| AflII | CTTAAG | 1 cut(s) | 500 |
| AflIII | ACRYGT | 1 cut(s) | 750 |
| AgsI | TTSAA | 6 cut(s) | 115, 523, 564, 721, 967, 1042 |
| AjnI | CCWGG | 6 cut(s) | 76, 186, 274, 316, 591, 1054 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 465, 497 |
| AluBI | AGCT | 5 cut(s) | 234, 272, 635, 657, 692 |
| AluI | AGCT | 5 cut(s) | 234, 272, 635, 657, 692 |
| Alw26I | GTCTC | 2 cut(s) | 27, 75 |
| AlwI | GGATC | 1 cut(s) | 977 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 775 |
| AoxI | GGCC | 3 cut(s) | 277, 665, 1044 |
| ApeKI | GCWGC | 3 cut(s) | 335, 635, 1028 |
| ApoI | RAATTY | 2 cut(s) | 17, 940 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 516, 548 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 559 |
| AspS9I | GGNCC | 6 cut(s) | 127, 614, 624, 665, 772, 958 |
| AsuHPI | GGTGA | 1 cut(s) | 826 |
| AvaII | GGWCC | 5 cut(s) | 127, 614, 624, 772, 958 |
| BalI | TGGCCA | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 709 |
| BbvI | GCAGC | 3 cut(s) | 322, 622, 1015 |
| BceAI | ACGGC | 1 cut(s) | 730 |
| BciT130I | CCWGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| BcoDI | GTCTC | 2 cut(s) | 27, 75 |
| BfaI | CTAG | 3 cut(s) | 339, 495, 881 |
| BfrI | CTTAAG | 1 cut(s) | 500 |
| BfuAI | ACCTGC | 1 cut(s) | 783 |
| BisI | GCNGC | 3 cut(s) | 336, 636, 1029 |
| BlsI | GCNGC | 3 cut(s) | 337, 637, 1030 |
| Bme1390I | CCNGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| Bme18I | GGWCC | 5 cut(s) | 127, 614, 624, 772, 958 |
| BmgT120I | GGNCC | 6 cut(s) | 127, 614, 624, 665, 772, 958 |
| BmiI | GGNNCC | 5 cut(s) | 616, 625, 626, 666, 960 |
| BmrFI | CCNGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| BmsI | GCATC | 2 cut(s) | 280, 904 |
| BpiI | GAAGAC | 1 cut(s) | 709 |
| BpmI | CTGGAG | 1 cut(s) | 99 |
| Bpu10I | CCTNAGC | 1 cut(s) | 768 |
| BsaAI | YACGTR | 1 cut(s) | 751 |
| BsaI | GGTCTC | 1 cut(s) | 75 |
| BsaJI | CCNNGG | 2 cut(s) | 285, 592 |
| BsaWI | WCCGGW | 1 cut(s) | 29 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 193, 286, 592, 593, 803, 993, 1019 |
| Bse1I | ACTGG | 1 cut(s) | 639 |
| Bse3DI | GCAATG | 1 cut(s) | 1038 |
| BseBI | CCWGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| BseDI | CCNNGG | 2 cut(s) | 285, 592 |
| BseGI | GGATG | 3 cut(s) | 295, 844, 886 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 193, 286, 592, 593, 803, 993, 1019 |
| BseMI | GCAATG | 1 cut(s) | 1038 |
| BseMII | CTCAG | 1 cut(s) | 782 |
| BseNI | ACTGG | 1 cut(s) | 639 |
| BseXI | GCAGC | 3 cut(s) | 322, 622, 1015 |
| BseYI | CCCAGC | 1 cut(s) | 875 |
| Bsh1236I | CGCG | 1 cut(s) | 221 |
| BshFI | GGCC | 3 cut(s) | 279, 667, 1046 |
| BsiSI | CCGG | 1 cut(s) | 30 |
| BsiWI | CGTACG | 1 cut(s) | 747 |
| BslFI | GGGAC | 6 cut(s) | 269, 518, 637, 820, 847, 995 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 193, 286, 592, 593, 803, 993, 1019 |
| BsmAI | GTCTC | 2 cut(s) | 27, 75 |
| BsmFI | GGGAC | 6 cut(s) | 269, 518, 637, 820, 847, 995 |
| BsnI | GGCC | 3 cut(s) | 279, 667, 1046 |
| Bso31I | GGTCTC | 1 cut(s) | 75 |
| Bsp143I | GATC | 3 cut(s) | 177, 883, 982 |
| Bsp19I | CCATGG | 1 cut(s) | 285 |
| Bsp68I | TCGCGA | 1 cut(s) | 221 |
| BspACI | CCGC | 2 cut(s) | 191, 743 |
| BspANI | GGCC | 3 cut(s) | 279, 667, 1046 |
| BspCNI | CTCAG | 1 cut(s) | 781 |
| BspFNI | CGCG | 1 cut(s) | 221 |
| BspLI | GGNNCC | 5 cut(s) | 616, 625, 626, 666, 960 |
| BspMI | ACCTGC | 1 cut(s) | 783 |
| BspPI | GGATC | 1 cut(s) | 977 |
| BspTI | CTTAAG | 1 cut(s) | 500 |
| BspTNI | GGTCTC | 1 cut(s) | 75 |
| BsrDI | GCAATG | 1 cut(s) | 1038 |
| BsrI | ACTGG | 1 cut(s) | 639 |
| BssECI | CCNNGG | 2 cut(s) | 285, 592 |
| BssMI | GATC | 3 cut(s) | 177, 883, 982 |
| BssT1I | CCWWGG | 1 cut(s) | 285 |
| Bst2UI | CCWGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| Bst4CI | ACNGT | 4 cut(s) | 214, 568, 676, 1003 |
| BstAFI | CTTAAG | 1 cut(s) | 500 |
| BstBAI | YACGTR | 1 cut(s) | 751 |
| BstC8I | GCNNGC | 1 cut(s) | 232 |
| BstDEI | CTNAG | 4 cut(s) | 768, 868, 992, 1073 |
| BstDSI | CCRYGG | 1 cut(s) | 285 |
| BstF5I | GGATG | 3 cut(s) | 295, 844, 886 |
| BstFNI | CGCG | 1 cut(s) | 221 |
| BstKTI | GATC | 3 cut(s) | 180, 886, 985 |
| BstMAI | GTCTC | 2 cut(s) | 27, 75 |
| BstMBI | GATC | 3 cut(s) | 177, 883, 982 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 227, 341, 504 |
| BstNI | CCWGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| BstNSI | RCATGY | 1 cut(s) | 533 |
| BstSCI | CCNGG | 6 cut(s) | 76, 186, 274, 316, 591, 1054 |
| BstUI | CGCG | 1 cut(s) | 221 |
| BstV1I | GCAGC | 3 cut(s) | 322, 622, 1015 |
| BstV2I | GAAGAC | 1 cut(s) | 709 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 317, 923 |
| BsuRI | GGCC | 3 cut(s) | 279, 667, 1046 |
| BtgI | CCRYGG | 1 cut(s) | 285 |
| BtgZI | GCGATG | 1 cut(s) | 247 |
| BtsCI | GGATG | 3 cut(s) | 295, 844, 886 |
| BtsI | GCAGTG | 1 cut(s) | 762 |
| BtsIMutI | CAGTG | 2 cut(s) | 762, 999 |
| BtuMI | TCGCGA | 1 cut(s) | 221 |
| BveI | ACCTGC | 1 cut(s) | 783 |
| Cac8I | GCNNGC | 1 cut(s) | 232 |
| CaiI | CAGNNNCTG | 1 cut(s) | 775 |
| Cfr13I | GGNCC | 6 cut(s) | 127, 614, 624, 665, 772, 958 |
| CseI | GACGC | 2 cut(s) | 62, 236 |
| CsiI | ACCWGGT | 1 cut(s) | 316 |
| Csp6I | GTAC | 3 cut(s) | 8, 403, 748 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 852, 887 |
| CviAII | CATG | 6 cut(s) | 181, 286, 331, 530, 902, 1064 |
| CviQI | GTAC | 3 cut(s) | 8, 403, 748 |
| DdeI | CTNAG | 4 cut(s) | 768, 868, 992, 1073 |
| DpnI | GATC | 3 cut(s) | 179, 885, 984 |
| DpnII | GATC | 3 cut(s) | 177, 883, 982 |
| EaeI | YGGCCR | 1 cut(s) | 277 |
| EciI | GGCGGA | 1 cut(s) | 732 |
| Eco130I | CCWWGG | 1 cut(s) | 285 |
| Eco31I | GGTCTC | 1 cut(s) | 75 |
| Eco47I | GGWCC | 5 cut(s) | 127, 614, 624, 772, 958 |
| EcoO109I | RGGNCCY | 4 cut(s) | 614, 624, 772, 958 |
| EcoRII | CCWGG | 6 cut(s) | 76, 186, 274, 316, 591, 1054 |
| EcoT14I | CCWWGG | 1 cut(s) | 285 |
| EcoT22I | ATGCAT | 1 cut(s) | 897 |
| ErhI | CCWWGG | 1 cut(s) | 285 |
| FaeI | CATG | 6 cut(s) | 184, 289, 334, 533, 905, 1067 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 128, 160 |
| FaqI | GGGAC | 6 cut(s) | 269, 518, 637, 820, 847, 995 |
| FatI | CATG | 6 cut(s) | 180, 285, 330, 529, 901, 1063 |
| FblI | GTMKAC | 1 cut(s) | 678 |
| Fnu4HI | GCNGC | 3 cut(s) | 336, 636, 1029 |
| FokI | GGATG | 3 cut(s) | 302, 851, 873 |
| Fsp4HI | GCNGC | 3 cut(s) | 336, 636, 1029 |
| FspBI | CTAG | 3 cut(s) | 339, 495, 881 |
| GluI | GCNGC | 3 cut(s) | 336, 636, 1029 |
| GsaI | CCCAGC | 1 cut(s) | 879 |
| GsuI | CTGGAG | 1 cut(s) | 99 |
| HaeIII | GGCC | 3 cut(s) | 279, 667, 1046 |
| HapII | CCGG | 1 cut(s) | 30 |
| HgaI | GACGC | 2 cut(s) | 62, 236 |
| Hin1II | CATG | 6 cut(s) | 184, 289, 334, 533, 905, 1067 |
| HincII | GTYRAC | 1 cut(s) | 74 |
| HindII | GTYRAC | 1 cut(s) | 74 |
| HindIII | AAGCTT | 2 cut(s) | 655, 690 |
| HinfI | GANTC | 4 cut(s) | 364, 714, 737, 1038 |
| HpaII | CCGG | 1 cut(s) | 30 |
| HphI | GGTGA | 1 cut(s) | 826 |
| Hpy166II | GTNNAC | 3 cut(s) | 74, 127, 679 |
| Hpy188I | TCNGA | 5 cut(s) | 52, 106, 152, 783, 1076 |
| Hpy188III | TCNNGA | 5 cut(s) | 220, 304, 535, 734, 770 |
| Hpy8I | GTNNAC | 3 cut(s) | 74, 127, 679 |
| HpyAV | CCTTC | 2 cut(s) | 461, 805 |
| HpyCH4III | ACNGT | 4 cut(s) | 214, 568, 676, 1003 |
| HpyCH4IV | ACGT | 1 cut(s) | 750 |
| HpyCH4V | TGCA | 3 cut(s) | 790, 895, 1031 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 227, 341, 504 |
| HpyF3I | CTNAG | 4 cut(s) | 768, 868, 992, 1073 |
| HpySE526I | ACGT | 1 cut(s) | 750 |
| Hsp92II | CATG | 6 cut(s) | 184, 289, 334, 533, 905, 1067 |
| KflI | GGGWCCC | 1 cut(s) | 624 |
| Kzo9I | GATC | 3 cut(s) | 177, 883, 982 |
| LmnI | GCTCC | 2 cut(s) | 153, 277 |
| Lsp1109I | GCAGC | 3 cut(s) | 322, 622, 1015 |
| LweI | GCATC | 2 cut(s) | 280, 904 |
| MabI | ACCWGGT | 1 cut(s) | 316 |
| MaeI | CTAG | 3 cut(s) | 339, 495, 881 |
| MaeII | ACGT | 1 cut(s) | 750 |
| MaeIII | GTNAC | 2 cut(s) | 301, 353 |
| MalI | GATC | 3 cut(s) | 179, 885, 984 |
| MboI | GATC | 3 cut(s) | 177, 883, 982 |
| MboII | GAAGA | 3 cut(s) | 709, 829, 962 |
| MlsI | TGGCCA | 1 cut(s) | 279 |
| MluCI | AATT | 5 cut(s) | 17, 42, 558, 757, 940 |
| MluNI | TGGCCA | 1 cut(s) | 279 |
| MlyI | GAGTC | 1 cut(s) | 723 |
| MmeI | TCCRAC | 1 cut(s) | 904 |
| MnlI | CCTC | 5 cut(s) | 58, 465, 789, 795, 999 |
| Mox20I | TGGCCA | 1 cut(s) | 279 |
| Mph1103I | ATGCAT | 1 cut(s) | 897 |
| MroXI | GAANNNNTTC | 1 cut(s) | 559 |
| MscI | TGGCCA | 1 cut(s) | 279 |
| MseI | TTAA | 3 cut(s) | 462, 501, 756 |
| MslI | CAYNNNNRTG | 2 cut(s) | 900, 906 |
| Msp20I | TGGCCA | 1 cut(s) | 279 |
| MspCI | CTTAAG | 1 cut(s) | 500 |
| MspI | CCGG | 1 cut(s) | 30 |
| MspR9I | CCNGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| MvaI | CCWGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| MvnI | CGCG | 1 cut(s) | 221 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 227, 341, 504 |
| NcoI | CCATGG | 1 cut(s) | 285 |
| NdeII | GATC | 3 cut(s) | 177, 883, 982 |
| NlaIII | CATG | 6 cut(s) | 184, 289, 334, 533, 905, 1067 |
| NlaIV | GGNNCC | 5 cut(s) | 616, 625, 626, 666, 960 |
| NmuCI | GTSAC | 1 cut(s) | 301 |
| NruI | TCGCGA | 1 cut(s) | 221 |
| NsiI | ATGCAT | 1 cut(s) | 897 |
| NspI | RCATGY | 1 cut(s) | 533 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 218 |
| PdmI | GAANNNNTTC | 1 cut(s) | 559 |
| PfeI | GAWTC | 3 cut(s) | 364, 737, 1038 |
| Pfl23II | CGTACG | 1 cut(s) | 747 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 286 |
| PkrI | GCNGC | 3 cut(s) | 337, 637, 1030 |
| PleI | GAGTC | 1 cut(s) | 722 |
| PpsI | GAGTC | 1 cut(s) | 722 |
| Ppu21I | YACGTR | 1 cut(s) | 751 |
| PpuMI | RGGWCCY | 4 cut(s) | 614, 624, 772, 958 |
| Psp5II | RGGWCCY | 4 cut(s) | 614, 624, 772, 958 |
| Psp6I | CCWGG | 6 cut(s) | 76, 186, 274, 316, 591, 1054 |
| PspFI | CCCAGC | 1 cut(s) | 875 |
| PspGI | CCWGG | 6 cut(s) | 76, 186, 274, 316, 591, 1054 |
| PspLI | CGTACG | 1 cut(s) | 747 |
| PspN4I | GGNNCC | 5 cut(s) | 616, 625, 626, 666, 960 |
| PspPI | GGNCC | 6 cut(s) | 127, 614, 624, 665, 772, 958 |
| PspPPI | RGGWCCY | 4 cut(s) | 614, 624, 772, 958 |
| PstNI | CAGNNNCTG | 1 cut(s) | 775 |
| RruI | TCGCGA | 1 cut(s) | 221 |
| RsaI | GTAC | 3 cut(s) | 9, 404, 749 |
| RsaNI | GTAC | 3 cut(s) | 8, 403, 748 |
| RseI | CAYNNNNRTG | 2 cut(s) | 900, 906 |
| SaqAI | TTAA | 3 cut(s) | 462, 501, 756 |
| SatI | GCNGC | 3 cut(s) | 336, 636, 1029 |
| Sau3AI | GATC | 3 cut(s) | 177, 883, 982 |
| Sau96I | GGNCC | 6 cut(s) | 127, 614, 624, 665, 772, 958 |
| SchI | GAGTC | 1 cut(s) | 723 |
| ScrFI | CCNGG | 6 cut(s) | 78, 188, 276, 318, 593, 1056 |
| SexAI | ACCWGGT | 1 cut(s) | 316 |
| SfaNI | GCATC | 2 cut(s) | 280, 904 |
| SinI | GGWCC | 5 cut(s) | 127, 614, 624, 772, 958 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 900, 906 |
| SmlI | CTYRAG | 1 cut(s) | 500 |
| SmoI | CTYRAG | 1 cut(s) | 500 |
| Sse9I | AATT | 5 cut(s) | 17, 42, 558, 757, 940 |
| SsiI | CCGC | 2 cut(s) | 191, 743 |
| SspMI | CTAG | 3 cut(s) | 339, 495, 881 |
| StyD4I | CCNGG | 6 cut(s) | 76, 186, 274, 316, 591, 1054 |
| StyI | CCWWGG | 1 cut(s) | 285 |
| TaaI | ACNGT | 4 cut(s) | 214, 568, 676, 1003 |
| TaiI | ACGT | 1 cut(s) | 753 |
| TaqI | TCGA | 3 cut(s) | 249, 372, 553 |
| TasI | AATT | 5 cut(s) | 17, 42, 558, 757, 940 |
| TatI | WGTACW | 1 cut(s) | 402 |
| TfiI | GAWTC | 3 cut(s) | 364, 737, 1038 |
| Tru1I | TTAA | 3 cut(s) | 462, 501, 756 |
| Tru9I | TTAA | 3 cut(s) | 462, 501, 756 |
| TscAI | CASTG | 2 cut(s) | 769, 1006 |
| TseFI | GTSAC | 1 cut(s) | 301 |
| TseI | GCWGC | 3 cut(s) | 335, 635, 1028 |
| Tsp45I | GTSAC | 1 cut(s) | 301 |
| TspDTI | ATGAA | 3 cut(s) | 185, 659, 963 |
| TspGWI | ACGGA | 1 cut(s) | 851 |
| TspRI | CASTG | 2 cut(s) | 769, 1006 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 286 |
| Vha464I | CTTAAG | 1 cut(s) | 500 |
| VpaK11BI | GGWCC | 5 cut(s) | 127, 614, 624, 772, 958 |
| XapI | RAATTY | 2 cut(s) | 17, 940 |
| XceI | RCATGY | 1 cut(s) | 533 |
| XmiI | GTMKAC | 1 cut(s) | 678 |
| XmnI | GAANNNNTTC | 1 cut(s) | 559 |
| XspI | CTAG | 3 cut(s) | 339, 495, 881 |
| Zsp2I | ATGCAT | 1 cut(s) | 897 |