Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000359

Physical Location & Seq

Genomic Coordinates Forward (+)

59323402 .. 59325839

Gene Structure 2438 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00209050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGTCGTCTAAAAACTGGAACTTTGCCCTGCTGATTTTATCATTTCTACCACTCTTCTTTCATCGTGACGCTTGGGCAGATTATAATTGGGTCGTGAAAGAAGCTACATATACAAGGCTGTGCAGCACTAAAAAGATATTGACTGTTAATGGAAAATTTCCCGGACCAGTTTTACGAGCTTATAGGGGAGATACAATCTATGTCAATGTTCATAACGGAGGCAGATACAATATCACCATTCACTGGCATGGAGTAAGCCAACCAAGGAATCCATGGTCTGATGGTCCGGAATACATCACACAATGTCCTATTCAACCAGGGGGAAGTTTCAAACAAAAGATCATATTTTCTACAGAAGAAGGTACCATTTGGTGGCACGCTCACAGTGATTGGTCACGTGCGACAGTTCATGGAGCAATCTATGTCTATCCAAAGCCAGGAACTAGCTACCCTTTTCCCAAGCCCCATGATGAAGTTCCCATAATATTAGGTGAGTGGTGGAAGCAAGATGTAATGGAGGTACTGAATGAATTTGTTAGAACCGGAGACACTCCAATTGCCTCTGACGCATACACCATAAATGGTCAACCTGGAGACCTCTATCCTTGCTCAAAATCAGATACATTCAAACTCTCTGTGGACCAAAACAAGACCTACTTGCTCCGAATAATCCACGCAGGAATGAACGAGATCCAGTTCATTGCGGTGGCAAACCATAAACTCACGGTGGTCGCGACAGACGCAAGCTACACGAAGCCAATCGAAACGGACTACATAGCAATATCTCCTGGCCAATCCATGGATGCCTTGTTGGTCACGAGCCAACAACCTGGTCGCTATTACATGGCTGCTAGGGCGTACCAGAATAACTCTGTGATTCCCTTCGACCACACCACCGCCACAGCTATAGTTGAGTACAATAATGGAAATCATAATGATAATGATACTCCATTATTTCCTTACCTTCCTCCCTTTAATGACACAAAAAGAGCCTTTGGCTCTTTCGCTAACCTTAAGAGCATACCCGTTGAGTTCAAACAGCATGTCCCAAAAACTATCACAACTCGAATAATTTCAACAGTTTCACTCAACACATTCCCTTGCCAGGGAAATCAAACCTGTCAAGGACCCAACGGGACCCGATTAGCTGCCAGTATGAACAACATAAGCTTTGTGGAGCCAGATACAGTAGACATATTAGAAGCTTACTACTACTATATCAATGGAGTCTTCAAAAAGGGTTTTCCAGATTCTCCACCGTACGTGTTTAATTTCACTGCTCAGGACCTGCCTCTGAGTTTGCAAATACCAAAGAGGGGGACGAAGGTGAAGATTTTGGAATATGGGACGGATGTGGAAGTTGTGTATCAAAATACAAACTTAGTGGGTGGGCTAGATCATCCTATGCATCTTCATGGGTATGACTTCCACATAGTTGGAATTGGCTTTGGAAATTTTGATGAAGAAAAGGACCCATTGAATTACAATCTTGTTGATCCCCCTCTTAGGAACACTGTCAATGTCCCCAAAGGTGGTTGGGCCGCAATCAGATTCAAGGCCACAAATCCTGGAGTATGGTTTTTGCACTGCCATTTGGAGCGTCACCTAACATGGGGAATGGACACTGTTTTTATTGTGAAGAATGGGAAATACAGGAAGGAAAGGCTGCTGCCTCCTCCACCGGATATGCCACCATGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005507 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0010023 GO:0010035 GO:0010038 GO:0016491 GO:0016722 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019748 GO:0042221 GO:0043167 GO:0043169 GO:0044237 GO:0044249 GO:0044550 GO:0046189 GO:0046483 GO:0046688 GO:0046872 GO:0046914 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

566

Amino Acids

64.0

Weight (kDa)

7.04

Isoelectric Point (pI)

28.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	32 - 145	6.4e-38	Multicopper oxidase
Cu-oxidase	PF00394	158 - 308	7.4e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	416 - 549	1.5e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48100
fragaria_vesca	FvH4_1g24380 FvH4_2g05800 FvH4_5g30730
malus_domestica	MD01G1234900.v1.1 MD01G1235100.v1.1 MD01G1235200.v1.1 MD07G1307400.v1.1 MD07G1308000.v1.1 MD10G1042300.v1.1 MD10G1042400.v1.1 MD10G1042500.v1.1 MD10G1042700.v1.1
prunus_persica	Prupe.2G325200_v2.0.a1 Prupe.6G242000_v2.0.a1 Prupe.8G046800_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1 Prupe.8G046900_v2.0.a1
pyrus_communis	pycom01g24320 pycom01g24330 pycom07g28020 pycom10g02950 pycom17g03690
rosa_chinensis	RchiOBHm_Chr1g0384031 RchiOBHm_Chr2g0120941 RchiOBHm_Chr2g0120971 RchiOBHm_Chr2g0121051 RchiOBHm_Chr2g0121181 RchiOBHm_Chr2g0121211 RchiOBHm_Chr3g0473931 RchiOBHm_Chr3g0473941 RchiOBHm_Chr6g0257941 RchiOBHm_Chr6g0284781
rosa_laevigata	RLG00000008541 RLG00000014737 RLG00000018604 RLG00000018607 RLG00000018608 RLG00000018610 RLG00000018611 RLG00000018613 RLG00000023967 RLG00000023970 RLG00000026078 RLG00000035183
rosa_multiflora	Rmu_sc0000079.1_g000043 Rmu_sc0000079.1_g000062 Rmu_sc0000079.1_g000069 Rmu_sc0000621.1_g000019 Rmu_sc0000621.1_g000025 Rmu_sc0000621.1_g000041 Rmu_sc0000652.1_g000018 Rmu_sc0002414.1_g000030 Rmu_sc0002414.1_g000033 Rmu_sc0002843.1_g000016 Rmu_sc0005137.1_g000035 Rmu_sc0005139.1_g000021
rosa_roxburghii	Rroxscaffold_2G00122530 Rroxscaffold_2G00122570 Rroxscaffold_2G00122580 Rroxscaffold_2G00122650 Rroxscaffold_4G00277080 Rroxscaffold_6G00407610 Rroxscaffold_6G00407620 Rroxscaffold_7G00209050
rosa_rugosa	Rorug01G0444300 Rorug02G0232700 Rorug02G0232700 Rorug02G0232900 Rorug03G0137100 Rorug05G0565600 Rorug05G0566500
rosa_samantha	Rh1BG427300 Rh1CG440100 Rh2CG278100 Rh2CG278200 Rh2CG278700 Rh2CG278800 Rh2CG279100 Rh2DG314200 Rh2DG314300 Rh2DG314600 Rh3AG187200 Rh3DG211700 Rh3DG211800 Rh5AG356600 Rh6BG078000 Rh6BG078700 Rh6CG073300 Rh6DG070300 Rh6DG190200 Rh6DG274700 Rh7BG365900
rosa_wichuraiana	Rw0G018400 Rw1G040270 Rw2G023160 Rw2G023170 Rw2G023190 Rw2G023200 Rw2G023220 Rw2G023230 Rw3G017140 Rw3G017150 Rw4G012840 Rw6G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	84
Acc36I	ACCTGC	1 cut(s)	1296
Acc65I	GGTACC	1 cut(s)	362
AccB1I	GGYRCC	1 cut(s)	362
AccB7I	CCANNNNNTGG	3 cut(s)	243, 372, 799
AccI	GTMKAC	1 cut(s)	1191
AccII	CGCG	1 cut(s)	734
AccIII	TCCGGA	1 cut(s)	286
AciI	CCGC	3 cut(s)	704, 897, 1542
AclWI	GGATC	2 cut(s)	685, 1490
AcoI	YGGCCR	1 cut(s)	790
AcsI	RAATTY	3 cut(s)	155, 530, 1453
AcvI	CACGTG	1 cut(s)	398
AfaI	GTAC	5 cut(s)	364, 522, 860, 917, 1262
AflII	CTTAAG	1 cut(s)	1013
AflIII	ACRYGT	1 cut(s)	1263
AgsI	TTSAA	8 cut(s)	314, 331, 628, 1036, 1077, 1234, 1480, 1555
AjnI	CCWGG	7 cut(s)	316, 436, 589, 787, 829, 1104, 1567
AluBI	AGCT	8 cut(s)	104, 179, 447, 747, 905, 1148, 1170, 1205
AluI	AGCT	8 cut(s)	104, 179, 447, 747, 905, 1148, 1170, 1205
Alw26I	GTCTC	2 cut(s)	540, 588
AlwI	GGATC	2 cut(s)	685, 1490
AlwNI	CAGNNNCTG	1 cut(s)	1288
Aor13HI	TCCGGA	1 cut(s)	286
AoxI	GGCC	3 cut(s)	790, 1539, 1557
ApeKI	GCWGC	5 cut(s)	123, 848, 1148, 1666, 1669
ApoI	RAATTY	3 cut(s)	155, 530, 1453
ArsI	GACNNNNNNTTYG	2 cut(s)	1029, 1061
Asp700I	GAANNNNTTC	1 cut(s)	1072
Asp718I	GGTACC	1 cut(s)	362
AspS9I	GGNCC	8 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471, 1539
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	4 cut(s)	226, 503, 1339, 1595
AvaII	GGWCC	7 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471
BalI	TGGCCA	1 cut(s)	792
BanI	GGYRCC	1 cut(s)	362
BauI	CACGAG	1 cut(s)	817
BbrPI	CACGTG	1 cut(s)	398
BbsI	GAAGAC	1 cut(s)	1222
BbvI	GCAGC	5 cut(s)	135, 835, 1135, 1653, 1656
BccI	CCATC	1 cut(s)	275
BciT130I	CCWGG	7 cut(s)	318, 438, 591, 789, 831, 1106, 1569
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	2 cut(s)	540, 588
BfaI	CTAG	3 cut(s)	444, 852, 1394
BfmI	CTRYAG	2 cut(s)	351, 906
BfrI	CTTAAG	1 cut(s)	1013
BfuAI	ACCTGC	1 cut(s)	1296
BisI	GCNGC	6 cut(s)	124, 849, 1149, 1542, 1667, 1670
BlsI	GCNGC	6 cut(s)	125, 850, 1150, 1543, 1668, 1671
Bme1390I	CCNGG	8 cut(s)	162, 318, 438, 591, 789, 831, 1106, 1569
Bme18I	GGWCC	7 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471
BmgT120I	GGNCC	8 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471, 1539
BmiI	GGNNCC	6 cut(s)	364, 1129, 1138, 1139, 1179, 1473
BmrFI	CCNGG	8 cut(s)	162, 318, 438, 591, 789, 831, 1106, 1569
BmsI	GCATC	2 cut(s)	793, 1417
BpiI	GAAGAC	1 cut(s)	1222
BpmI	CTGGAG	2 cut(s)	612, 1590
Bpu10I	CCTNAGC	1 cut(s)	1281
BpuMI	CCSGG	1 cut(s)	162
BsaAI	YACGTR	2 cut(s)	398, 1264
BsaI	GGTCTC	1 cut(s)	588
BsaJI	CCNNGG	5 cut(s)	263, 272, 317, 798, 1105
BsaWI	WCCGGW	3 cut(s)	286, 542, 1681
Bse1I	ACTGG	5 cut(s)	20, 167, 248, 694, 1152
Bse3DI	GCAATG	1 cut(s)	699
BseAI	TCCGGA	1 cut(s)	286
BseBI	CCWGG	7 cut(s)	318, 438, 591, 789, 831, 1106, 1569
BseDI	CCNNGG	5 cut(s)	263, 272, 317, 798, 1105
BseGI	GGATG	3 cut(s)	808, 1357, 1399
BseMI	GCAATG	1 cut(s)	699
BseMII	CTCAG	2 cut(s)	1286, 1295
BseNI	ACTGG	5 cut(s)	20, 167, 248, 694, 1152
BseRI	GAGGAG	1 cut(s)	1665
BseXI	GCAGC	5 cut(s)	135, 835, 1135, 1653, 1656
BsgI	GTGCAG	1 cut(s)	142
Bsh1236I	CGCG	1 cut(s)	734
BshFI	GGCC	3 cut(s)	792, 1541, 1559
BshNI	GGYRCC	1 cut(s)	362
BsiSI	CCGG	4 cut(s)	162, 287, 543, 1682
BsiWI	CGTACG	1 cut(s)	1260
BslFI	GGGAC	5 cut(s)	1031, 1150, 1333, 1360, 1508
BsmAI	GTCTC	2 cut(s)	540, 588
BsmFI	GGGAC	5 cut(s)	1031, 1150, 1333, 1360, 1508
BsnI	GGCC	3 cut(s)	792, 1541, 1559
Bso31I	GGTCTC	1 cut(s)	588
Bsp13I	TCCGGA	1 cut(s)	286
Bsp143I	GATC	4 cut(s)	339, 690, 1396, 1495
Bsp19I	CCATGG	2 cut(s)	272, 798
Bsp68I	TCGCGA	1 cut(s)	734
BspACI	CCGC	3 cut(s)	704, 897, 1542
BspANI	GGCC	3 cut(s)	792, 1541, 1559
BspCNI	CTCAG	2 cut(s)	1287, 1294
BspEI	TCCGGA	1 cut(s)	286
BspFNI	CGCG	1 cut(s)	734
BspLI	GGNNCC	6 cut(s)	364, 1129, 1138, 1139, 1179, 1473
BspMI	ACCTGC	1 cut(s)	1296
BspPI	GGATC	2 cut(s)	685, 1490
BspT107I	GGYRCC	1 cut(s)	362
BspTI	CTTAAG	1 cut(s)	1013
BspTNI	GGTCTC	1 cut(s)	588
BsrDI	GCAATG	1 cut(s)	699
BsrI	ACTGG	5 cut(s)	20, 167, 248, 694, 1152
BssECI	CCNNGG	5 cut(s)	263, 272, 317, 798, 1105
BssMI	GATC	4 cut(s)	339, 690, 1396, 1495
BssSI	CACGAG	1 cut(s)	817
BssT1I	CCWWGG	3 cut(s)	263, 272, 798
Bst2BI	CACGAG	1 cut(s)	817
Bst2UI	CCWGG	7 cut(s)	318, 438, 591, 789, 831, 1106, 1569
Bst4CI	ACNGT	9 cut(s)	145, 386, 406, 727, 1081, 1189, 1260, 1516, 1627
Bst6I	CTCTTC	1 cut(s)	59
BstAFI	CTTAAG	1 cut(s)	1013
BstBAI	YACGTR	2 cut(s)	398, 1264
BstC8I	GCNNGC	2 cut(s)	378, 745
BstDEI	CTNAG	4 cut(s)	1281, 1295, 1381, 1505
BstDSI	CCRYGG	2 cut(s)	272, 798
BstF5I	GGATG	3 cut(s)	808, 1357, 1399
BstFNI	CGCG	1 cut(s)	734
BstKTI	GATC	4 cut(s)	342, 693, 1399, 1498
BstMAI	GTCTC	2 cut(s)	540, 588
BstMBI	GATC	4 cut(s)	339, 690, 1396, 1495
BstMWI	GCNNNNNNNGC	3 cut(s)	566, 740, 854
BstNI	CCWGG	7 cut(s)	318, 438, 591, 789, 831, 1106, 1569
BstNSI	RCATGY	1 cut(s)	1046
BstSCI	CCNGG	8 cut(s)	160, 316, 436, 589, 787, 829, 1104, 1567
BstSFI	CTRYAG	2 cut(s)	351, 906
BstUI	CGCG	1 cut(s)	734
BstV1I	GCAGC	5 cut(s)	135, 835, 1135, 1653, 1656
BstV2I	GAAGAC	1 cut(s)	1222
BstX2I	RGATCY	1 cut(s)	690
BstXI	CCANNNNNNTGG	2 cut(s)	830, 1436
BstYI	RGATCY	1 cut(s)	690
BsuRI	GGCC	3 cut(s)	792, 1541, 1559
BtgI	CCRYGG	2 cut(s)	272, 798
BtsCI	GGATG	3 cut(s)	808, 1357, 1399
BtsI	GCAGTG	2 cut(s)	1275, 1585
BtsIMutI	CAGTG	6 cut(s)	241, 391, 1275, 1512, 1585, 1623
BtuMI	TCGCGA	1 cut(s)	734
BveI	ACCTGC	1 cut(s)	1296
Cac8I	GCNNGC	2 cut(s)	378, 745
CaiI	CAGNNNCTG	1 cut(s)	1288
Cfr13I	GGNCC	8 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471, 1539
CseI	GACGC	4 cut(s)	77, 575, 749, 1589
CsiI	ACCWGGT	1 cut(s)	829
Csp6I	GTAC	5 cut(s)	363, 521, 859, 916, 1261
CspCI	CAANNNNNGTGG	2 cut(s)	1365, 1400
CviQI	GTAC	5 cut(s)	363, 521, 859, 916, 1261
DdeI	CTNAG	4 cut(s)	1281, 1295, 1381, 1505
DpnI	GATC	4 cut(s)	341, 692, 1398, 1497
DpnII	GATC	4 cut(s)	339, 690, 1396, 1495
EaeI	YGGCCR	1 cut(s)	790
Eam1104I	CTCTTC	1 cut(s)	59
EarI	CTCTTC	1 cut(s)	59
Eco130I	CCWWGG	3 cut(s)	263, 272, 798
Eco31I	GGTCTC	1 cut(s)	588
Eco47I	GGWCC	7 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471
Eco72I	CACGTG	1 cut(s)	398
EcoO109I	RGGNCCY	4 cut(s)	1127, 1137, 1285, 1471
EcoRII	CCWGG	7 cut(s)	316, 436, 589, 787, 829, 1104, 1567
EcoT14I	CCWWGG	3 cut(s)	263, 272, 798
EcoT22I	ATGCAT	1 cut(s)	1410
ErhI	CCWWGG	3 cut(s)	263, 272, 798
FalI	AAGNNNNNCTT	2 cut(s)	641, 673
FaqI	GGGAC	5 cut(s)	1031, 1150, 1333, 1360, 1508
FblI	GTMKAC	1 cut(s)	1191
Fnu4HI	GCNGC	6 cut(s)	124, 849, 1149, 1542, 1667, 1670
FokI	GGATG	3 cut(s)	815, 1364, 1386
Fsp4HI	GCNGC	6 cut(s)	124, 849, 1149, 1542, 1667, 1670
FspBI	CTAG	3 cut(s)	444, 852, 1394
GluI	GCNGC	6 cut(s)	124, 849, 1149, 1542, 1667, 1670
GsuI	CTGGAG	2 cut(s)	612, 1590
HaeIII	GGCC	3 cut(s)	792, 1541, 1559
HapII	CCGG	4 cut(s)	162, 287, 543, 1682
HgaI	GACGC	4 cut(s)	77, 575, 749, 1589
HincII	GTYRAC	1 cut(s)	587
HindII	GTYRAC	1 cut(s)	587
HindIII	AAGCTT	2 cut(s)	1168, 1203
HinfI	GANTC	5 cut(s)	268, 877, 1227, 1250, 1551
HpaII	CCGG	4 cut(s)	162, 287, 543, 1682
HphI	GGTGA	4 cut(s)	226, 503, 1339, 1595
Hpy166II	GTNNAC	3 cut(s)	587, 640, 1192
Hpy188I	TCNGA	6 cut(s)	280, 565, 619, 665, 1296, 1550
Hpy188III	TCNNGA	7 cut(s)	65, 94, 287, 733, 817, 1247, 1283
Hpy8I	GTNNAC	3 cut(s)	587, 640, 1192
HpyAV	CCTTC	5 cut(s)	353, 892, 974, 1318, 1651
HpyCH4III	ACNGT	9 cut(s)	145, 386, 406, 727, 1081, 1189, 1260, 1516, 1627
HpyCH4IV	ACGT	2 cut(s)	397, 1263
HpyCH4V	TGCA	4 cut(s)	123, 1303, 1408, 1585
HpyF10VI	GCNNNNNNNGC	3 cut(s)	566, 740, 854
HpyF3I	CTNAG	4 cut(s)	1281, 1295, 1381, 1505
HpySE526I	ACGT	2 cut(s)	397, 1263
KflI	GGGWCCC	1 cut(s)	1137
Kpn2I	TCCGGA	1 cut(s)	286
KpnI	GGTACC	1 cut(s)	366
Kzo9I	GATC	4 cut(s)	339, 690, 1396, 1495
LmnI	GCTCC	4 cut(s)	413, 666, 1177, 1597
Lsp1109I	GCAGC	5 cut(s)	135, 835, 1135, 1653, 1656
LweI	GCATC	2 cut(s)	793, 1417
MabI	ACCWGGT	1 cut(s)	829
MaeI	CTAG	3 cut(s)	444, 852, 1394
MaeII	ACGT	2 cut(s)	397, 1263
MaeIII	GTNAC	4 cut(s)	65, 393, 814, 1601
MalI	GATC	4 cut(s)	341, 692, 1398, 1497
MboI	GATC	4 cut(s)	339, 690, 1396, 1495
MboII	GAAGA	7 cut(s)	46, 368, 1222, 1342, 1403, 1475, 1651
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	1 cut(s)	690
MlsI	TGGCCA	1 cut(s)	792
MluCI	AATT	9 cut(s)	85, 155, 530, 555, 1071, 1270, 1440, 1453, 1480
MluNI	TGGCCA	1 cut(s)	792
MlyI	GAGTC	1 cut(s)	1236
MmeI	TCCRAC	1 cut(s)	1417
Mox20I	TGGCCA	1 cut(s)	792
Mph1103I	ATGCAT	1 cut(s)	1410
MroI	TCCGGA	1 cut(s)	286
MroXI	GAANNNNTTC	1 cut(s)	1072
MscI	TGGCCA	1 cut(s)	792
MseI	TTAA	5 cut(s)	147, 975, 1014, 1269, 1699
MslI	CAYNNNNRTG	4 cut(s)	246, 704, 1413, 1419
Msp20I	TGGCCA	1 cut(s)	792
MspCI	CTTAAG	1 cut(s)	1013
MspI	CCGG	4 cut(s)	162, 287, 543, 1682
MspR9I	CCNGG	8 cut(s)	162, 318, 438, 591, 789, 831, 1106, 1569
MunI	CAATTG	1 cut(s)	555
MvaI	CCWGG	7 cut(s)	318, 438, 591, 789, 831, 1106, 1569
MvnI	CGCG	1 cut(s)	734
MwoI	GCNNNNNNNGC	3 cut(s)	566, 740, 854
NciI	CCSGG	1 cut(s)	162
NcoI	CCATGG	2 cut(s)	272, 798
NdeII	GATC	4 cut(s)	339, 690, 1396, 1495
NlaIV	GGNNCC	6 cut(s)	364, 1129, 1138, 1139, 1179, 1473
NmuCI	GTSAC	4 cut(s)	65, 393, 814, 1601
NruI	TCGCGA	1 cut(s)	734
NsiI	ATGCAT	1 cut(s)	1410
NspI	RCATGY	1 cut(s)	1046
PcsI	WCGNNNNNNNCGW	1 cut(s)	731
PdmI	GAANNNNTTC	1 cut(s)	1072
PfeI	GAWTC	4 cut(s)	268, 877, 1250, 1551
Pfl23II	CGTACG	1 cut(s)	1260
PflMI	CCANNNNNTGG	3 cut(s)	243, 372, 799
PfoI	TCCNGGA	2 cut(s)	160, 1567
PkrI	GCNGC	6 cut(s)	125, 850, 1150, 1543, 1668, 1671
PleI	GAGTC	1 cut(s)	1235
PmaCI	CACGTG	1 cut(s)	398
PmlI	CACGTG	1 cut(s)	398
PpsI	GAGTC	1 cut(s)	1235
Ppu21I	YACGTR	2 cut(s)	398, 1264
PpuMI	RGGWCCY	4 cut(s)	1127, 1137, 1285, 1471
PsiI	TTATAA	1 cut(s)	84
Psp5II	RGGWCCY	4 cut(s)	1127, 1137, 1285, 1471
Psp6I	CCWGG	7 cut(s)	316, 436, 589, 787, 829, 1104, 1567
PspCI	CACGTG	1 cut(s)	398
PspGI	CCWGG	7 cut(s)	316, 436, 589, 787, 829, 1104, 1567
PspLI	CGTACG	1 cut(s)	1260
PspN4I	GGNNCC	6 cut(s)	364, 1129, 1138, 1139, 1179, 1473
PspPI	GGNCC	8 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471, 1539
PspPPI	RGGWCCY	4 cut(s)	1127, 1137, 1285, 1471
PstNI	CAGNNNCTG	1 cut(s)	1288
PsuI	RGATCY	1 cut(s)	690
RruI	TCGCGA	1 cut(s)	734
RsaI	GTAC	5 cut(s)	364, 522, 860, 917, 1262
RsaNI	GTAC	5 cut(s)	363, 521, 859, 916, 1261
RseI	CAYNNNNRTG	4 cut(s)	246, 704, 1413, 1419
SaqAI	TTAA	5 cut(s)	147, 975, 1014, 1269, 1699
SatI	GCNGC	6 cut(s)	124, 849, 1149, 1542, 1667, 1670
Sau3AI	GATC	4 cut(s)	339, 690, 1396, 1495
Sau96I	GGNCC	8 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471, 1539
SchI	GAGTC	1 cut(s)	1236
ScrFI	CCNGG	8 cut(s)	162, 318, 438, 591, 789, 831, 1106, 1569
SexAI	ACCWGGT	1 cut(s)	829
SfaNI	GCATC	2 cut(s)	793, 1417
SfcI	CTRYAG	2 cut(s)	351, 906
SinI	GGWCC	7 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471
SmiMI	CAYNNNNRTG	4 cut(s)	246, 704, 1413, 1419
SmlI	CTYRAG	1 cut(s)	1013
SmoI	CTYRAG	1 cut(s)	1013
Sse9I	AATT	9 cut(s)	85, 155, 530, 555, 1071, 1270, 1440, 1453, 1480
SsiI	CCGC	3 cut(s)	704, 897, 1542
SspI	AATATT	1 cut(s)	486
SspMI	CTAG	3 cut(s)	444, 852, 1394
StyD4I	CCNGG	8 cut(s)	160, 316, 436, 589, 787, 829, 1104, 1567
StyI	CCWWGG	3 cut(s)	263, 272, 798
TaaI	ACNGT	9 cut(s)	145, 386, 406, 727, 1081, 1189, 1260, 1516, 1627
TaiI	ACGT	2 cut(s)	400, 1266
TaqI	TCGA	3 cut(s)	762, 885, 1066
TasI	AATT	9 cut(s)	85, 155, 530, 555, 1071, 1270, 1440, 1453, 1480
TatI	WGTACW	1 cut(s)	915
TauI	GCSGC	1 cut(s)	1544
TfiI	GAWTC	4 cut(s)	268, 877, 1250, 1551
Tru1I	TTAA	5 cut(s)	147, 975, 1014, 1269, 1699
Tru9I	TTAA	5 cut(s)	147, 975, 1014, 1269, 1699
TscAI	CASTG	6 cut(s)	248, 391, 1282, 1519, 1592, 1630
TseFI	GTSAC	4 cut(s)	65, 393, 814, 1601
TseI	GCWGC	5 cut(s)	123, 848, 1148, 1666, 1669
Tsp45I	GTSAC	4 cut(s)	65, 393, 814, 1601
TspGWI	ACGGA	3 cut(s)	231, 782, 1364
TspRI	CASTG	6 cut(s)	248, 391, 1282, 1519, 1592, 1630
Van91I	CCANNNNNTGG	3 cut(s)	243, 372, 799
Vha464I	CTTAAG	1 cut(s)	1013
VpaK11BI	GGWCC	7 cut(s)	164, 284, 640, 1127, 1137, 1285, 1471
XapI	RAATTY	3 cut(s)	155, 530, 1453
XceI	RCATGY	1 cut(s)	1046
XcmI	CCANNNNNNNNNTGG	1 cut(s)	270
XmiI	GTMKAC	1 cut(s)	1191
XmnI	GAANNNNTTC	1 cut(s)	1072
XspI	CTAG	3 cut(s)	444, 852, 1394
Zsp2I	ATGCAT	1 cut(s)	1410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.