Prupe.1G439700_v2.0.a1

Lipolytic acyl hydrolase (LAH)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000265
Physical Location & Seq
Forward (+)
37384611 .. 37386912
2302 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G439700.1

Sequence Viewer

Length: 1254 bp
ATGCCTTCTCTTTCATCTCAAATGGAGAGAGCAAGATCATTTCTTCAGTCTCCCACTTACGGGAACATCGTCACTGTTCTGAGCATTGATGGAGGTGGAATTAGAGGGATTATTCCCGGAACTATACTCAAATTCCTAGAATCCGAGCTTCAGAAGCTGGATGGTGAAGAAGCAAGGCTTGCAGATTACTTTGATGTGATTGCAGGGACTAGCACTGGCGGGCTTGTGACTGCCATGCTTACTACCCCAGATGAAAATAATCGACCCTTGTTTGCTGCTAAAGACATTAATGATTTTTATCTCGAACACTGTCCTAAAATCTTCCCCCAAGACAGCAACTATACATTGATTGGTGAGGCCATGGACATGGTAAAAGCTGTGTCAGGACCAAAGTATGATGGAAAGTATTTACATAAGATAGTGAAGGAAATATTAGGAGACATACGATTAAGTGACACGTTAACAAACGTTATAATCCCAACTTTTGATATAAAGCGGCTCCAACCAATGGTCTTCTCCAGCTATGAGGAGAAAAAGAACACTAGCATAAATGCTTTACTGTCGGATATATGCATTGGGACTTCAGCAGCCCCAACCTATCTCCCAGCGCACCATTTTGAAACAAAAACTTCCACTGGTGAATCAAGAGATTTCGATCTCATTGATGGTGGCGTTGCTGCTAACAACCCGGCTTTGGTTGCTATAAGCGAAGTGACAAAAGAAATCCACCAGGGAAATTCTGACTTCTTTGCTATAAGGTCAACTGAGTATGGTCGGTTCTTAGTGATATCGTTGGGTACTGGTTCAGCAAAATCTGAAGAGAAATATAATGCCGATGATGCAGCTAAATGGGGTCTTTTGGGATGGTTGACGAAAGGGGGTTCCACTCCATTGGTAGATGTATTTACTCAAGCAAGTAGTGACATGGTCGATTTCCACCTTGCTACTGTTTTTCGAGCTCTTGACTGTGAGAAAAATTACCTCCGAATTCAGGATGATACATTGGAGAAAACAGTATCTTCAGTGGATATTGCTACGCAAGAAAACTTGAATAACCTTGTAAAAGTTGGAGAGGAATTGTTGAAGAAACCAGTTTCGAGGGTGAATTTGCAAACTGGTATCTATGAGCCTGCTCATCAGGATACAAATGAAGAAGCTCTCGTAAGGGTGGCGCAAATTCTGTCCAGGGAAAGGGAGGTCCGTGAACTGAGATCACCACATGGAAAGGCTGTAACTGACAGCAACTCCAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Patatin

Protein Analysis

418

Amino Acids

45.83

Weight (kDa)

5.03

Isoelectric Point (pI)

35.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26560
fragaria_vesca FvH4_2g34690 FvH4_2g34750 FvH4_2g34750 FvH4_2g34754 FvH4_2g34770 FvH4_2g34780 FvH4_2g34780 FvH4_2g34780 FvH4_2g34780 FvH4_2g34780 FvH4_2g34800 FvH4_2g34800 FvH4_2g34811 FvH4_4g24280 FvH4_4g24280
malus_domestica MD08G1104900.v1.1 MD08G1105100.v1.1 MD08G1105300.v1.1 MD08G1105500.v1.1 MD08G1105900.v1.1 MD15G1085500.v1.1 MD15G1085600.v1.1 MD15G1085800.v1.1 MD15G1085900.v1.1 MD15G1086000.v1.1 MD15G1086500.v1.1
prunus_persica Prupe.1G439600_v2.0.a1 Prupe.1G439700_v2.0.a1 Prupe.1G439800_v2.0.a1 Prupe.1G439800_v2.0.a1 Prupe.1G439900_v2.0.a1 Prupe.1G439900_v2.0.a1 Prupe.1G440100_v2.0.a1
pyrus_communis pycom08g08620 pycom08g08640 pycom08g08650 pycom08g08680 pycom08g08700 pycom15g08080 pycom15g08090 pycom15g08110 pycom15g08140
rosa_chinensis RchiOBHm_Chr3g0482851 RchiOBHm_Chr3g0482871 RchiOBHm_Chr6g0307241 RchiOBHm_Chr6g0307291 RchiOBHm_Chr6g0307341 RchiOBHm_Chr6g0307351 RchiOBHm_Chr6g0307381 RchiOBHm_Chr6g0307391 RchiOBHm_Chr6g0307491 RchiOBHm_Chr6g0307661
rosa_laevigata RLG00000008291 RLG00000010711 RLG00000010718 RLG00000010719 RLG00000010721 RLG00000010722 RLG00000023319 RLG00000023320
rosa_multiflora Rmu_co8005452.1_g000001 Rmu_co8126120.1_g000001 Rmu_sc0000031.1_g000008 Rmu_sc0000031.1_g000009 Rmu_sc0000031.1_g000011 Rmu_sc0000031.1_g000020 Rmu_sc0001612.1_g000003 Rmu_sc0003419.1_g000004 Rmu_sc0005715.1_g000002 Rmu_sc0005715.1_g000003 Rmu_sc0010071.1_g000001 Rmu_sc0010071.1_g000008 Rmu_ssc0000175.1_g000026 Rmu_ssc0000175.1_g000028
rosa_roxburghii Rroxscaffold_2G00138670 Rroxscaffold_6G00398870 Rroxscaffold_7G00160950 Rroxscaffold_7G00160980 Rroxscaffold_7G00161030 Rroxscaffold_7G00161040 Rroxscaffold_7G00161060
rosa_rugosa Rorug03G0201600 Rorug03G0201900 Rorug05G0124400 Rorug06G0357900 Rorug06G0358000 Rorug06G0358200 Rorug06G0358300 Rorug06G0358400 Rorug06G0358700 Rorug06G0358800
rosa_samantha Rh2AG174100 Rh2AG174200 Rh2AG174600 Rh2BG015200 Rh2CG179000 Rh2CG179100 Rh2CG179200 Rh2CG181300 Rh2DG180400 Rh3AG250400 Rh3AG250600 Rh3BG286800 Rh3CG284300 Rh3DG279900 Rh5DG283200 Rh5DG283300 Rh5DG283400 Rh6AG468500 Rh6AG468700 Rh6BG431300 Rh6BG431600 Rh6BG431700 Rh6BG431800 Rh6BG431900 Rh6BG479000 Rh6BG479300 Rh6CG483700 Rh6CG483800 Rh6CG484700 Rh6DG470300 Rh6DG470400 Rh6DG470600 Rh6DG471300 Rh6DG471500
rosa_wichuraiana Rw3G022650 Rw3G022670 Rw6G040840 Rw6G040850 Rw6G040920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 473
AccB7I CCANNNNNTGG 1 cut(s) 508
AciI CCGC 2 cut(s) 219, 496
AclI AACGTT 1 cut(s) 468
AcsI RAATTY 5 cut(s) 131, 736, 987, 1105, 1176
AcuI CTGAAG 5 cut(s) 29, 134, 567, 837, 1005
AfaI GTAC 1 cut(s) 799
AfiI CCNNNNNNNGG 6 cut(s) 59, 60, 508, 694, 991, 1191
AflIII ACRYGT 1 cut(s) 456
AgsI TTSAA 3 cut(s) 620, 1051, 1084
AjnI CCWGG 2 cut(s) 729, 1184
AluBI AGCT 7 cut(s) 148, 157, 377, 522, 845, 959, 1157
AluI AGCT 7 cut(s) 148, 157, 377, 522, 845, 959, 1157
Alw21I GWGCWC 1 cut(s) 961
Alw26I GTCTC 2 cut(s) 54, 432
AlwNI CAGNNNCTG 1 cut(s) 157
AoxI GGCC 1 cut(s) 357
ApeKI GCWGC 4 cut(s) 275, 587, 677, 842
ApoI RAATTY 5 cut(s) 131, 736, 987, 1105, 1176
AseI ATTAAT 1 cut(s) 288
AspLEI GCGC 2 cut(s) 610, 1174
AspS9I GGNCC 2 cut(s) 386, 1198
AsuC2I CCSGG 2 cut(s) 117, 689
AsuHPI GGTGA 5 cut(s) 176, 365, 650, 1114, 1206
AvaII GGWCC 2 cut(s) 386, 1198
BanII GRGCYC 1 cut(s) 961
BbsI GAAGAC 1 cut(s) 505
Bbv12I GWGCWC 1 cut(s) 961
BbvI GCAGC 4 cut(s) 262, 599, 664, 854
BccI CCATC 5 cut(s) 83, 155, 392, 659, 858
BciT130I CCWGG 2 cut(s) 731, 1186
BciVI GTATCC 1 cut(s) 1135
BcnI CCSGG 2 cut(s) 117, 689
BcoDI GTCTC 2 cut(s) 54, 432
BfaI CTAG 3 cut(s) 137, 210, 543
BfuI GTATCC 1 cut(s) 1135
BisI GCNGC 5 cut(s) 276, 497, 588, 678, 843
BlsI GCNGC 5 cut(s) 277, 498, 589, 679, 844
Bme1390I CCNGG 4 cut(s) 117, 689, 731, 1186
Bme18I GGWCC 2 cut(s) 386, 1198
BmgT120I GGNCC 2 cut(s) 386, 1198
BmiI GGNNCC 2 cut(s) 500, 883
BmrFI CCNGG 4 cut(s) 117, 689, 731, 1186
BmsI GCATC 1 cut(s) 829
BpiI GAAGAC 1 cut(s) 505
BpmI CTGGAG 1 cut(s) 502
BpuEI CTTGAG 1 cut(s) 894
BpuMI CCSGG 2 cut(s) 117, 689
BsaBI GATNNNNATC 2 cut(s) 297, 654
BsaJI CCNNGG 3 cut(s) 360, 730, 1185
BsaXI ACNNNNNCTCC 1 cut(s) 1229
Bsc4I CCNNNNNNNGG 6 cut(s) 59, 60, 508, 694, 991, 1191
Bse1I ACTGG 5 cut(s) 220, 640, 805, 1091, 1120
Bse8I GATNNNNATC 2 cut(s) 297, 654
BseBI CCWGG 2 cut(s) 731, 1186
BseDI CCNNGG 3 cut(s) 360, 730, 1185
BseGI GGATG 3 cut(s) 166, 869, 1000
BseJI GATNNNNATC 2 cut(s) 297, 654
BseLI CCNNNNNNNGG 6 cut(s) 59, 60, 508, 694, 991, 1191
BseMII CTCAG 3 cut(s) 71, 756, 1199
BseNI ACTGG 5 cut(s) 220, 640, 805, 1091, 1120
BseRI GAGGAG 1 cut(s) 542
BseXI GCAGC 4 cut(s) 262, 599, 664, 854
BseYI CCCAGC 1 cut(s) 604
BshFI GGCC 1 cut(s) 359
BsiHKAI GWGCWC 1 cut(s) 961
BsiSI CCGG 2 cut(s) 117, 689
BslFI GGGAC 2 cut(s) 220, 592
BslI CCNNNNNNNGG 6 cut(s) 59, 60, 508, 694, 991, 1191
BsmAI GTCTC 2 cut(s) 54, 432
BsmFI GGGAC 2 cut(s) 220, 592
BsnI GGCC 1 cut(s) 359
Bsp1286I GDGCHC 1 cut(s) 961
Bsp143I GATC 3 cut(s) 35, 655, 1211
Bsp19I CCATGG 1 cut(s) 360
BspACI CCGC 2 cut(s) 219, 496
BspANI GGCC 1 cut(s) 359
BspCNI CTCAG 3 cut(s) 72, 757, 1200
BspLI GGNNCC 2 cut(s) 500, 883
BsrI ACTGG 5 cut(s) 220, 640, 805, 1091, 1120
BssECI CCNNGG 3 cut(s) 360, 730, 1185
BssMI GATC 3 cut(s) 35, 655, 1211
BssT1I CCWWGG 1 cut(s) 360
Bst2UI CCWGG 2 cut(s) 731, 1186
Bst4CI ACNGT 6 cut(s) 76, 311, 561, 949, 968, 1015
Bst6I CTCTTC 1 cut(s) 813
BstAPI GCANNNNNTGC 1 cut(s) 179
BstC8I GCNNGC 3 cut(s) 180, 221, 1131
BstDEI CTNAG 4 cut(s) 80, 765, 781, 1208
BstDSI CCRYGG 1 cut(s) 360
BstF5I GGATG 3 cut(s) 166, 869, 1000
BstHHI GCGC 2 cut(s) 610, 1174
BstKTI GATC 3 cut(s) 38, 658, 1214
BstMAI GTCTC 2 cut(s) 54, 432
BstMBI GATC 3 cut(s) 35, 655, 1211
BstMWI GCNNNNNNNGC 4 cut(s) 154, 179, 698, 839
BstNI CCWGG 2 cut(s) 731, 1186
BstSCI CCNGG 4 cut(s) 115, 687, 729, 1184
BstV1I GCAGC 4 cut(s) 262, 599, 664, 854
BstV2I GAAGAC 1 cut(s) 505
BstXI CCANNNNNNTGG 2 cut(s) 367, 892
BsuI GTATCC 1 cut(s) 1135
BsuRI GGCC 1 cut(s) 359
BtgI CCRYGG 1 cut(s) 360
BtsCI GGATG 3 cut(s) 166, 869, 1000
BtsIMutI CAGTG 5 cut(s) 72, 213, 307, 633, 1029
Cac8I GCNNGC 3 cut(s) 180, 221, 1131
CaiI CAGNNNCTG 1 cut(s) 157
CfoI GCGC 2 cut(s) 610, 1174
Cfr13I GGNCC 2 cut(s) 386, 1198
Csp6I GTAC 1 cut(s) 798
CviAII CATG 5 cut(s) 235, 361, 367, 925, 1220
CviQI GTAC 1 cut(s) 798
DdeI CTNAG 4 cut(s) 80, 765, 781, 1208
DpnI GATC 3 cut(s) 37, 657, 1213
DpnII GATC 3 cut(s) 35, 655, 1211
Eam1104I CTCTTC 1 cut(s) 813
EarI CTCTTC 1 cut(s) 813
Ecl136II GAGCTC 1 cut(s) 959
Eco130I CCWWGG 1 cut(s) 360
Eco24I GRGCYC 1 cut(s) 961
Eco32I GATATC 1 cut(s) 789
Eco47I GGWCC 2 cut(s) 386, 1198
Eco53kI GAGCTC 1 cut(s) 959
Eco57I CTGAAG 5 cut(s) 29, 134, 567, 837, 1005
EcoICRI GAGCTC 1 cut(s) 959
EcoRI GAATTC 1 cut(s) 987
EcoRII CCWGG 2 cut(s) 729, 1184
EcoRV GATATC 1 cut(s) 789
EcoT14I CCWWGG 1 cut(s) 360
EcoT22I ATGCAT 1 cut(s) 575
EcoT38I GRGCYC 1 cut(s) 961
ErhI CCWWGG 1 cut(s) 360
FaeI CATG 5 cut(s) 238, 364, 370, 928, 1223
FalI AAGNNNNNCTT 2 cut(s) 162, 194
FaqI GGGAC 2 cut(s) 220, 592
FatI CATG 5 cut(s) 234, 360, 366, 924, 1219
FauI CCCGC 1 cut(s) 212
Fnu4HI GCNGC 5 cut(s) 276, 497, 588, 678, 843
FokI GGATG 3 cut(s) 173, 876, 1007
FriOI GRGCYC 1 cut(s) 961
Fsp4HI GCNGC 5 cut(s) 276, 497, 588, 678, 843
FspBI CTAG 3 cut(s) 137, 210, 543
GlaI GCGC 2 cut(s) 609, 1173
GluI GCNGC 5 cut(s) 276, 497, 588, 678, 843
GsaI CCCAGC 1 cut(s) 608
GsuI CTGGAG 1 cut(s) 502
HaeIII GGCC 1 cut(s) 359
HapII CCGG 2 cut(s) 117, 689
HhaI GCGC 2 cut(s) 610, 1174
Hin1II CATG 5 cut(s) 238, 364, 370, 928, 1223
Hin6I GCGC 2 cut(s) 608, 1172
HinP1I GCGC 2 cut(s) 608, 1172
HincII GTYRAC 3 cut(s) 462, 762, 870
HindII GTYRAC 3 cut(s) 462, 762, 870
HinfI GANTC 2 cut(s) 140, 641
HpaI GTTAAC 1 cut(s) 462
HpaII CCGG 2 cut(s) 117, 689
HphI GGTGA 5 cut(s) 176, 365, 650, 1114, 1206
Hpy166II GTNNAC 4 cut(s) 462, 762, 870, 1205
Hpy188I TCNGA 7 cut(s) 81, 145, 153, 565, 742, 817, 986
Hpy188III TCNNGA 6 cut(s) 302, 384, 645, 962, 992, 1139
Hpy8I GTNNAC 4 cut(s) 462, 762, 870, 1205
HpyAV CCTTC 2 cut(s) 15, 418
HpyCH4III ACNGT 6 cut(s) 76, 311, 561, 949, 968, 1015
HpyCH4IV ACGT 2 cut(s) 458, 468
HpyCH4V TGCA 5 cut(s) 182, 203, 573, 842, 1111
HpyF10VI GCNNNNNNNGC 4 cut(s) 154, 179, 698, 839
HpyF3I CTNAG 4 cut(s) 80, 765, 781, 1208
HpySE526I ACGT 2 cut(s) 458, 468
Hsp92II CATG 5 cut(s) 238, 364, 370, 928, 1223
HspAI GCGC 2 cut(s) 608, 1172
KspAI GTTAAC 1 cut(s) 462
Kzo9I GATC 3 cut(s) 35, 655, 1211
LmnI GCTCC 1 cut(s) 504
Lsp1109I GCAGC 4 cut(s) 262, 599, 664, 854
LweI GCATC 1 cut(s) 829
MaeI CTAG 3 cut(s) 137, 210, 543
MaeII ACGT 2 cut(s) 458, 468
MaeIII GTNAC 6 cut(s) 70, 226, 452, 712, 920, 1231
MalI GATC 3 cut(s) 37, 657, 1213
MboI GATC 3 cut(s) 35, 655, 1211
MboII GAAGA 8 cut(s) 35, 179, 313, 505, 830, 1011, 1096, 1163
MhlI GDGCHC 1 cut(s) 961
MluCI AATT 8 cut(s) 99, 131, 736, 976, 987, 1076, 1105, 1176
MmeI TCCRAC 3 cut(s) 526, 543, 1048
MnlI CCTC 8 cut(s) 86, 98, 349, 520, 992, 1066, 1092, 1189
Mph1103I ATGCAT 1 cut(s) 575
MseI TTAA 3 cut(s) 288, 449, 461
MslI CAYNNNNRTG 1 cut(s) 365
MspI CCGG 2 cut(s) 117, 689
MspR9I CCNGG 4 cut(s) 117, 689, 731, 1186
MvaI CCWGG 2 cut(s) 731, 1186
MwoI GCNNNNNNNGC 4 cut(s) 154, 179, 698, 839
NciI CCSGG 2 cut(s) 117, 689
NcoI CCATGG 1 cut(s) 360
NdeII GATC 3 cut(s) 35, 655, 1211
NlaIII CATG 5 cut(s) 238, 364, 370, 928, 1223
NlaIV GGNNCC 2 cut(s) 500, 883
NmuCI GTSAC 5 cut(s) 70, 226, 452, 712, 920
NsiI ATGCAT 1 cut(s) 575
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PfeI GAWTC 2 cut(s) 140, 641
PflFI GACNNNGTC 1 cut(s) 926
PflMI CCANNNNNTGG 1 cut(s) 508
PfoI TCCNGGA 1 cut(s) 115
PkrI GCNGC 5 cut(s) 277, 498, 589, 679, 844
PshBI ATTAAT 1 cut(s) 288
PsiI TTATAA 1 cut(s) 473
Psp124BI GAGCTC 1 cut(s) 961
Psp1406I AACGTT 1 cut(s) 468
Psp6I CCWGG 2 cut(s) 729, 1184
PspFI CCCAGC 1 cut(s) 604
PspGI CCWGG 2 cut(s) 729, 1184
PspN4I GGNNCC 2 cut(s) 500, 883
PspPI GGNCC 2 cut(s) 386, 1198
PsrI GAACNNNNNNTAC 2 cut(s) 761, 793
PstNI CAGNNNCTG 1 cut(s) 157
PsyI GACNNNGTC 1 cut(s) 926
RsaI GTAC 1 cut(s) 799
RsaNI GTAC 1 cut(s) 798
RseI CAYNNNNRTG 1 cut(s) 365
SacI GAGCTC 1 cut(s) 961
SaqAI TTAA 3 cut(s) 288, 449, 461
SatI GCNGC 5 cut(s) 276, 497, 588, 678, 843
Sau3AI GATC 3 cut(s) 35, 655, 1211
Sau96I GGNCC 2 cut(s) 386, 1198
ScrFI CCNGG 4 cut(s) 117, 689, 731, 1186
SduI GDGCHC 1 cut(s) 961
SfaNI GCATC 1 cut(s) 829
SinI GGWCC 2 cut(s) 386, 1198
SmiMI CAYNNNNRTG 1 cut(s) 365
SmlI CTYRAG 1 cut(s) 909
SmoI CTYRAG 1 cut(s) 909
Sse9I AATT 8 cut(s) 99, 131, 736, 976, 987, 1076, 1105, 1176
SsiI CCGC 2 cut(s) 219, 496
SspI AATATT 1 cut(s) 432
SspMI CTAG 3 cut(s) 137, 210, 543
SstI GAGCTC 1 cut(s) 961
StyD4I CCNGG 4 cut(s) 115, 687, 729, 1184
StyI CCWWGG 1 cut(s) 360
TaaI ACNGT 6 cut(s) 76, 311, 561, 949, 968, 1015
TaiI ACGT 2 cut(s) 461, 471
TaqI TCGA 6 cut(s) 262, 303, 654, 930, 955, 1097
TasI AATT 8 cut(s) 99, 131, 736, 976, 987, 1076, 1105, 1176
TauI GCSGC 1 cut(s) 499
TfiI GAWTC 2 cut(s) 140, 641
Tru1I TTAA 3 cut(s) 288, 449, 461
Tru9I TTAA 3 cut(s) 288, 449, 461
TscAI CASTG 5 cut(s) 79, 220, 314, 640, 1029
TseFI GTSAC 5 cut(s) 70, 226, 452, 712, 920
TseI GCWGC 4 cut(s) 275, 587, 677, 842
Tsp45I GTSAC 5 cut(s) 70, 226, 452, 712, 920
TspDTI ATGAA 2 cut(s) 267, 1164
TspGWI ACGGA 1 cut(s) 1190
TspRI CASTG 5 cut(s) 79, 220, 314, 640, 1029
Tth111I GACNNNGTC 1 cut(s) 926
Van91I CCANNNNNTGG 1 cut(s) 508
VpaK11BI GGWCC 2 cut(s) 386, 1198
VspI ATTAAT 1 cut(s) 288
XapI RAATTY 5 cut(s) 131, 736, 987, 1105, 1176
XspI CTAG 3 cut(s) 137, 210, 543
Zsp2I ATGCAT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.