Prupe.1G440100_v2.0.a1

Lipolytic acyl hydrolase (LAH)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000265
Physical Location & Seq
Reverse (-)
37402977 .. 37405298
2322 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G440100.1

Sequence Viewer

Length: 1221 bp
ATGGAAAGAACCGACAGTATCGTAGTTCCCCCAAGATATGGAAAGATGATCACAATTCTCAGCATCGATGGCGGCGGCATAAGAGGGCTTATCCCCGCAACCATCCTCTCTTTCCTCGAATCCGAACTTCAGAAGCTGGACGGTGAGGATGCAAGAATCGCCGACTACTTTGATGTGGTTGCAGGAACAAGCACAGGTGGTCTTGTGACGGCCATGCTCACAACCCCAAATGAGAATGACCGCCCACTGTTTTCTGCCAAAGATATTAGCGACTTTTACATGAATCACTGCCCTAAAATCTTCCCCCAAAAGAAGTTTCCTTTGTTTCGTTATACTAGAAAGATCATCAAAGCTCTGGGAGGACCAAAATACGATGGCAAGTATCTACATGGCTTGATTAGGCAAAAACTGGGCGACACAAAGATGGACCAAACATTGACTAATGTTGTCATTCCCACATTTGACATCAAGAATCTCCAGCCCACTGTCTTCTCCAGCTTTAGGGTAAGGCATAAGCCAAGCTACAATGCCTTGCTCTCTGACGTATGCATTGGAACCTCAGCAGCACCAACTTTTCTTCCAGCTCACTATTTTGAAACCAAGGACGAATTTGGACAAACTAGAGAATTTAACCTCATAGATGGTGGCGTGGCTGCAAATAATCCAACTTTACTTGCTATTTGTGAAGTAACAAACGAAATAAAGAAGGCGAATCCGGACTTCTTTCCTGTGAAACCAGTGGACTATGGACGATTTCTGGTGATATCATTAGGAACTGGCACATCAAAAGCTGAACTGAAATACAATTCACATACTGCAGCCAAATGGGGCCTCTTGAACTGGTTAACCAGCGGTGGCACCACCCCAATCATCAACGTGTTCAGTCAAGCAAGTGCCGATATGGTTGATCTTCACCTTTCTGGAGTTTTCCAAGCCCTCCACTCAGAGGATTACTATCTTCGAATTCAGGATGACACGCTTCGTGGGACGGTGTCTTCTGTGGATGTAGCCACAAAGAAGAACTTGTCCCGTCTTGTCACAGTTGGAGAAGGCCTATTGAAAGAACGAGTTTCCAGGGTTAATTTGGACAGTGGCAGGTTTGAGGCTTCTGATCGTGAGACGAATGAAGAGGCTCTTAGAAGGGTTGCAAAACTACTCTCTGAGGAGAAGCGTCTTCGCCAAGAAACGTTGAATAATGGGCTTGCTTCAAGCTCCCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Patatin

Protein Analysis

407

Amino Acids

44.97

Weight (kDa)

8.24

Isoelectric Point (pI)

31.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000265)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G26560
fragaria_vesca FvH4_2g34690 FvH4_2g34750 FvH4_2g34750 FvH4_2g34754 FvH4_2g34770 FvH4_2g34780 FvH4_2g34780 FvH4_2g34780 FvH4_2g34780 FvH4_2g34780 FvH4_2g34800 FvH4_2g34800 FvH4_2g34811 FvH4_4g24280 FvH4_4g24280
malus_domestica MD08G1104900.v1.1 MD08G1105100.v1.1 MD08G1105300.v1.1 MD08G1105500.v1.1 MD08G1105900.v1.1 MD15G1085500.v1.1 MD15G1085600.v1.1 MD15G1085800.v1.1 MD15G1085900.v1.1 MD15G1086000.v1.1 MD15G1086500.v1.1
prunus_persica Prupe.1G439600_v2.0.a1 Prupe.1G439700_v2.0.a1 Prupe.1G439800_v2.0.a1 Prupe.1G439800_v2.0.a1 Prupe.1G439900_v2.0.a1 Prupe.1G439900_v2.0.a1 Prupe.1G440100_v2.0.a1
pyrus_communis pycom08g08620 pycom08g08640 pycom08g08650 pycom08g08680 pycom08g08700 pycom15g08080 pycom15g08090 pycom15g08110 pycom15g08140
rosa_chinensis RchiOBHm_Chr3g0482851 RchiOBHm_Chr3g0482871 RchiOBHm_Chr6g0307241 RchiOBHm_Chr6g0307291 RchiOBHm_Chr6g0307341 RchiOBHm_Chr6g0307351 RchiOBHm_Chr6g0307381 RchiOBHm_Chr6g0307391 RchiOBHm_Chr6g0307491 RchiOBHm_Chr6g0307661
rosa_laevigata RLG00000008291 RLG00000010711 RLG00000010718 RLG00000010719 RLG00000010721 RLG00000010722 RLG00000023319 RLG00000023320
rosa_multiflora Rmu_co8005452.1_g000001 Rmu_co8126120.1_g000001 Rmu_sc0000031.1_g000008 Rmu_sc0000031.1_g000009 Rmu_sc0000031.1_g000011 Rmu_sc0000031.1_g000020 Rmu_sc0001612.1_g000003 Rmu_sc0003419.1_g000004 Rmu_sc0005715.1_g000002 Rmu_sc0005715.1_g000003 Rmu_sc0010071.1_g000001 Rmu_sc0010071.1_g000008 Rmu_ssc0000175.1_g000026 Rmu_ssc0000175.1_g000028
rosa_roxburghii Rroxscaffold_2G00138670 Rroxscaffold_6G00398870 Rroxscaffold_7G00160950 Rroxscaffold_7G00160980 Rroxscaffold_7G00161030 Rroxscaffold_7G00161040 Rroxscaffold_7G00161060
rosa_rugosa Rorug03G0201600 Rorug03G0201900 Rorug05G0124400 Rorug06G0357900 Rorug06G0358000 Rorug06G0358200 Rorug06G0358300 Rorug06G0358400 Rorug06G0358700 Rorug06G0358800
rosa_samantha Rh2AG174100 Rh2AG174200 Rh2AG174600 Rh2BG015200 Rh2CG179000 Rh2CG179100 Rh2CG179200 Rh2CG181300 Rh2DG180400 Rh3AG250400 Rh3AG250600 Rh3BG286800 Rh3CG284300 Rh3DG279900 Rh5DG283200 Rh5DG283300 Rh5DG283400 Rh6AG468500 Rh6AG468700 Rh6BG431300 Rh6BG431600 Rh6BG431700 Rh6BG431800 Rh6BG431900 Rh6BG479000 Rh6BG479300 Rh6CG483700 Rh6CG483800 Rh6CG484700 Rh6DG470300 Rh6DG470400 Rh6DG470600 Rh6DG471300 Rh6DG471500
rosa_wichuraiana Rw3G022650 Rw3G022670 Rw6G040840 Rw6G040850 Rw6G040920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1086
AccB1I GGYRCC 1 cut(s) 857
AccB7I CCANNNNNTGG 1 cut(s) 38
AccIII TCCGGA 1 cut(s) 715
AciI CCGC 5 cut(s) 72, 75, 96, 241, 852
AclI AACGTT 1 cut(s) 1187
AcoI YGGCCR 1 cut(s) 210
AcsI RAATTY 3 cut(s) 608, 626, 963
AcuI CTGAAG 1 cut(s) 113
AfiI CCNNNNNNNGG 3 cut(s) 38, 501, 946
AflIII ACRYGT 1 cut(s) 876
AgsI TTSAA 5 cut(s) 596, 838, 1060, 1192, 1209
AjnI CCWGG 1 cut(s) 1073
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AluBI AGCT 7 cut(s) 136, 353, 498, 522, 584, 791, 1212
AluI AGCT 7 cut(s) 136, 353, 498, 522, 584, 791, 1212
Alw26I GTCTC 1 cut(s) 1112
AlwNI CAGNNNCTG 1 cut(s) 136
Aor13HI TCCGGA 1 cut(s) 715
AoxI GGCC 3 cut(s) 210, 829, 1051
ApeKI GCWGC 3 cut(s) 563, 653, 818
ApoI RAATTY 3 cut(s) 608, 626, 963
AspS9I GGNCC 3 cut(s) 362, 427, 829
AsuHPI GGTGA 3 cut(s) 155, 772, 905
AsuII TTCGAA 1 cut(s) 961
AvaII GGWCC 2 cut(s) 362, 427
BanI GGYRCC 1 cut(s) 857
BbsI GAAGAC 3 cut(s) 481, 987, 1166
BbvCI CCTCAGC 1 cut(s) 559
BbvI GCAGC 3 cut(s) 575, 640, 830
BccI CCATC 5 cut(s) 62, 110, 368, 418, 635
BceAI ACGGC 1 cut(s) 225
BciT130I CCWGG 1 cut(s) 1075
BclI TGATCA 1 cut(s) 48
BcoDI GTCTC 1 cut(s) 1112
BfaI CTAG 2 cut(s) 336, 621
BfmI CTRYAG 1 cut(s) 816
BfuAI ACCTGC 1 cut(s) 1086
BisI GCNGC 5 cut(s) 73, 76, 564, 654, 819
BlsI GCNGC 5 cut(s) 74, 77, 565, 655, 820
Bme1390I CCNGG 1 cut(s) 1075
Bme18I GGWCC 2 cut(s) 362, 427
BmgT120I GGNCC 3 cut(s) 362, 427, 829
BmiI GGNNCC 3 cut(s) 556, 830, 859
BmrFI CCNGG 1 cut(s) 1075
BmrI ACTGGG 1 cut(s) 419
BmsI GCATC 2 cut(s) 72, 139
BmuI ACTGGG 1 cut(s) 419
BpiI GAAGAC 3 cut(s) 481, 987, 1166
BpmI CTGGAG 3 cut(s) 461, 478, 942
Bpu10I CCTNAGC 1 cut(s) 559
Bpu14I TTCGAA 1 cut(s) 961
Bsa29I ATCGAT 1 cut(s) 66
BsaBI GATNNNNATC 1 cut(s) 954
BsaJI CCNNGG 2 cut(s) 600, 1074
BsaWI WCCGGW 1 cut(s) 715
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 501, 946
Bse1I ACTGG 4 cut(s) 414, 737, 781, 845
Bse8I GATNNNNATC 1 cut(s) 954
BseAI TCCGGA 1 cut(s) 715
BseBI CCWGG 1 cut(s) 1075
BseCI ATCGAT 1 cut(s) 66
BseDI CCNNGG 2 cut(s) 600, 1074
BseGI GGATG 4 cut(s) 102, 154, 976, 1009
BseJI GATNNNNATC 1 cut(s) 954
BseLI CCNNNNNNNGG 3 cut(s) 38, 501, 946
BseMII CTCAG 4 cut(s) 73, 573, 957, 1152
BseNI ACTGG 4 cut(s) 414, 737, 781, 845
BseRI GAGGAG 1 cut(s) 1178
BseXI GCAGC 3 cut(s) 575, 640, 830
BshFI GGCC 3 cut(s) 212, 831, 1053
BshNI GGYRCC 1 cut(s) 857
BshVI ATCGAT 1 cut(s) 66
BsiSI CCGG 1 cut(s) 716
BslFI GGGAC 2 cut(s) 1000, 1012
BslI CCNNNNNNNGG 3 cut(s) 38, 501, 946
BsmAI GTCTC 1 cut(s) 1112
BsmBI CGTCTC 1 cut(s) 1112
BsmFI GGGAC 2 cut(s) 1000, 1012
BsnI GGCC 3 cut(s) 212, 831, 1053
Bsp119I TTCGAA 1 cut(s) 961
Bsp13I TCCGGA 1 cut(s) 715
Bsp143I GATC 4 cut(s) 48, 342, 907, 1111
BspACI CCGC 5 cut(s) 72, 75, 96, 241, 852
BspANI GGCC 3 cut(s) 212, 831, 1053
BspCNI CTCAG 4 cut(s) 72, 572, 956, 1153
BspDI ATCGAT 1 cut(s) 66
BspEI TCCGGA 1 cut(s) 715
BspLI GGNNCC 3 cut(s) 556, 830, 859
BspMAI CTGCAG 1 cut(s) 820
BspMI ACCTGC 1 cut(s) 1086
BspT104I TTCGAA 1 cut(s) 961
BspT107I GGYRCC 1 cut(s) 857
BsrI ACTGG 4 cut(s) 414, 737, 781, 845
BssECI CCNNGG 2 cut(s) 600, 1074
BssMI GATC 4 cut(s) 48, 342, 907, 1111
BssT1I CCWWGG 1 cut(s) 600
Bst2UI CCWGG 1 cut(s) 1075
Bst4CI ACNGT 7 cut(s) 17, 143, 249, 487, 991, 1042, 1091
Bst6I CTCTTC 1 cut(s) 1122
BstBI TTCGAA 1 cut(s) 961
BstC8I GCNNGC 1 cut(s) 1203
BstDEI CTNAG 5 cut(s) 59, 559, 943, 1136, 1161
BstF5I GGATG 4 cut(s) 102, 154, 976, 1009
BstKTI GATC 4 cut(s) 51, 345, 910, 1114
BstMAI GTCTC 1 cut(s) 1112
BstMBI GATC 4 cut(s) 48, 342, 907, 1111
BstMWI GCNNNNNNNGC 2 cut(s) 69, 158
BstNI CCWGG 1 cut(s) 1075
BstSCI CCNGG 1 cut(s) 1073
BstSFI CTRYAG 1 cut(s) 816
BstV1I GCAGC 3 cut(s) 575, 640, 830
BstV2I GAAGAC 3 cut(s) 481, 987, 1166
Bsu15I ATCGAT 1 cut(s) 66
BsuRI GGCC 3 cut(s) 212, 831, 1053
BsuTUI ATCGAT 1 cut(s) 66
BtsCI GGATG 4 cut(s) 102, 154, 976, 1009
BtsI GCAGTG 1 cut(s) 286
BtsIMutI CAGTG 6 cut(s) 245, 286, 483, 744, 1096, 1216
BveI ACCTGC 1 cut(s) 1086
Cac8I GCNNGC 1 cut(s) 1203
CaiI CAGNNNCTG 1 cut(s) 136
Cfr13I GGNCC 3 cut(s) 362, 427, 829
ClaI ATCGAT 1 cut(s) 66
CseI GACGC 1 cut(s) 1160
CviAII CATG 3 cut(s) 214, 280, 389
DdeI CTNAG 5 cut(s) 59, 559, 943, 1136, 1161
DpnI GATC 4 cut(s) 50, 344, 909, 1113
DpnII GATC 4 cut(s) 48, 342, 907, 1111
EaeI YGGCCR 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 1122
EarI CTCTTC 1 cut(s) 1122
Eco130I CCWWGG 1 cut(s) 600
Eco147I AGGCCT 1 cut(s) 1053
Eco32I GATATC 1 cut(s) 765
Eco47I GGWCC 2 cut(s) 362, 427
Eco57I CTGAAG 1 cut(s) 113
EcoO109I RGGNCCY 1 cut(s) 829
EcoRI GAATTC 1 cut(s) 963
EcoRII CCWGG 1 cut(s) 1073
EcoRV GATATC 1 cut(s) 765
EcoT14I CCWWGG 1 cut(s) 600
EcoT22I ATGCAT 1 cut(s) 551
ErhI CCWWGG 1 cut(s) 600
Esp3I CGTCTC 1 cut(s) 1112
FaeI CATG 3 cut(s) 217, 283, 392
FalI AAGNNNNNCTT 4 cut(s) 1007, 1039, 1119, 1151
FaqI GGGAC 2 cut(s) 1000, 1012
FatI CATG 3 cut(s) 213, 279, 388
FauI CCCGC 1 cut(s) 103
FbaI TGATCA 1 cut(s) 48
Fnu4HI GCNGC 5 cut(s) 73, 76, 564, 654, 819
FokI GGATG 4 cut(s) 89, 161, 983, 1016
Fsp4HI GCNGC 5 cut(s) 73, 76, 564, 654, 819
FspBI CTAG 2 cut(s) 336, 621
GluI GCNGC 5 cut(s) 73, 76, 564, 654, 819
GsuI CTGGAG 3 cut(s) 461, 478, 942
HaeIII GGCC 3 cut(s) 212, 831, 1053
HapII CCGG 1 cut(s) 716
HgaI GACGC 1 cut(s) 1160
Hin1II CATG 3 cut(s) 217, 283, 392
HincII GTYRAC 1 cut(s) 846
HindII GTYRAC 1 cut(s) 846
HinfI GANTC 5 cut(s) 119, 156, 283, 472, 712
HpaI GTTAAC 1 cut(s) 846
HpaII CCGG 1 cut(s) 716
HphI GGTGA 3 cut(s) 155, 772, 905
Hpy166II GTNNAC 2 cut(s) 742, 846
Hpy188I TCNGA 6 cut(s) 124, 132, 541, 946, 1111, 1162
Hpy188III TCNNGA 6 cut(s) 469, 716, 835, 921, 968, 1115
Hpy8I GTNNAC 2 cut(s) 742, 846
HpyAV CCTTC 3 cut(s) 700, 1043, 1134
HpyCH4III ACNGT 7 cut(s) 17, 143, 249, 487, 991, 1042, 1091
HpyCH4IV ACGT 3 cut(s) 543, 876, 1187
HpyCH4V TGCA 6 cut(s) 152, 182, 549, 656, 818, 1148
HpyF10VI GCNNNNNNNGC 2 cut(s) 69, 158
HpyF3I CTNAG 5 cut(s) 59, 559, 943, 1136, 1161
HpySE526I ACGT 3 cut(s) 543, 876, 1187
Hsp92II CATG 3 cut(s) 217, 283, 392
Kpn2I TCCGGA 1 cut(s) 715
Ksp22I TGATCA 1 cut(s) 48
KspAI GTTAAC 1 cut(s) 846
Kzo9I GATC 4 cut(s) 48, 342, 907, 1111
LmnI GCTCC 1 cut(s) 1217
Lsp1109I GCAGC 3 cut(s) 575, 640, 830
LweI GCATC 2 cut(s) 72, 139
MaeI CTAG 2 cut(s) 336, 621
MaeII ACGT 3 cut(s) 543, 876, 1187
MaeIII GTNAC 3 cut(s) 205, 688, 1036
MalI GATC 4 cut(s) 50, 344, 909, 1113
MboI GATC 4 cut(s) 48, 342, 907, 1111
MboII GAAGA 9 cut(s) 292, 481, 569, 902, 950, 987, 1030, 1139, 1166
MluCI AATT 6 cut(s) 54, 608, 626, 805, 963, 1081
MmeI TCCRAC 2 cut(s) 689, 1024
Mph1103I ATGCAT 1 cut(s) 551
MroI TCCGGA 1 cut(s) 715
MseI TTAA 3 cut(s) 630, 845, 1080
MslI CAYNNNNRTG 2 cut(s) 422, 875
MspA1I CMGCKG 1 cut(s) 852
MspI CCGG 1 cut(s) 716
MspR9I CCNGG 1 cut(s) 1075
MvaI CCWGG 1 cut(s) 1075
MwoI GCNNNNNNNGC 2 cut(s) 69, 158
NdeII GATC 4 cut(s) 48, 342, 907, 1111
NlaIII CATG 3 cut(s) 217, 283, 392
NlaIV GGNNCC 3 cut(s) 556, 830, 859
NmuCI GTSAC 2 cut(s) 205, 1036
NsiI ATGCAT 1 cut(s) 551
NspV TTCGAA 1 cut(s) 961
PceI AGGCCT 1 cut(s) 1053
PfeI GAWTC 5 cut(s) 119, 156, 283, 472, 712
PflFI GACNNNGTC 1 cut(s) 991
PflMI CCANNNNNTGG 1 cut(s) 38
PkrI GCNGC 5 cut(s) 74, 77, 565, 655, 820
Psp1406I AACGTT 1 cut(s) 1187
Psp6I CCWGG 1 cut(s) 1073
PspGI CCWGG 1 cut(s) 1073
PspN4I GGNNCC 3 cut(s) 556, 830, 859
PspPI GGNCC 3 cut(s) 362, 427, 829
PstI CTGCAG 1 cut(s) 820
PstNI CAGNNNCTG 1 cut(s) 136
PsyI GACNNNGTC 1 cut(s) 991
RseI CAYNNNNRTG 2 cut(s) 422, 875
SaqAI TTAA 3 cut(s) 630, 845, 1080
SatI GCNGC 5 cut(s) 73, 76, 564, 654, 819
Sau3AI GATC 4 cut(s) 48, 342, 907, 1111
Sau96I GGNCC 3 cut(s) 362, 427, 829
ScrFI CCNGG 1 cut(s) 1075
SfaNI GCATC 2 cut(s) 72, 139
SfcI CTRYAG 1 cut(s) 816
SfuI TTCGAA 1 cut(s) 961
SinI GGWCC 2 cut(s) 362, 427
SmiMI CAYNNNNRTG 2 cut(s) 422, 875
Sse9I AATT 6 cut(s) 54, 608, 626, 805, 963, 1081
SseBI AGGCCT 1 cut(s) 1053
SsiI CCGC 5 cut(s) 72, 75, 96, 241, 852
SspMI CTAG 2 cut(s) 336, 621
StuI AGGCCT 1 cut(s) 1053
StyD4I CCNGG 1 cut(s) 1073
StyI CCWWGG 1 cut(s) 600
TaaI ACNGT 7 cut(s) 17, 143, 249, 487, 991, 1042, 1091
TaiI ACGT 3 cut(s) 546, 879, 1190
TaqI TCGA 3 cut(s) 66, 117, 961
TasI AATT 6 cut(s) 54, 608, 626, 805, 963, 1081
TauI GCSGC 2 cut(s) 75, 78
TfiI GAWTC 5 cut(s) 119, 156, 283, 472, 712
Tru1I TTAA 3 cut(s) 630, 845, 1080
Tru9I TTAA 3 cut(s) 630, 845, 1080
TscAI CASTG 5 cut(s) 252, 293, 490, 744, 1096
TseFI GTSAC 2 cut(s) 205, 1036
TseI GCWGC 3 cut(s) 563, 653, 818
Tsp45I GTSAC 2 cut(s) 205, 1036
TspDTI ATGAA 2 cut(s) 296, 1140
TspRI CASTG 5 cut(s) 252, 293, 490, 744, 1096
Tth111I GACNNNGTC 1 cut(s) 991
Van91I CCANNNNNTGG 1 cut(s) 38
VpaK11BI GGWCC 2 cut(s) 362, 427
XapI RAATTY 3 cut(s) 608, 626, 963
XcmI CCANNNNNNNNNTGG 1 cut(s) 1081
XspI CTAG 2 cut(s) 336, 621
Zsp2I ATGCAT 1 cut(s) 551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.