Prupe.2G180200_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
22363207 .. 22363779
573 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G180200.1

Sequence Viewer

Length: 573 bp
ATGGCTGCAGATATCCGCTATCAATGGCAATCCATAGTTTTACATGAGCGTGATTCCTTTATTTATGTCACGTTCAACATTCTACTAATCAATCTTGCCCAACAAGTGCCTGCTCCTGCTTCCACTTCCACTCAAGCCATTCTTGCTTTTATAGTTCCCATTCTTCTCACCTTTATTCAGATTAAATTCCAACCTTTAACGTCTTCTCCTTTTGAAACTCATCATGCCGCCACCATGATTGCCATAGCCAGCTTACTTGCATACAGCTTGGCTGTTGGGGCTAGGCTAAGGTTCCCTACTCACTCTCCTACTTACTCTCGCTTCGCCGTAAGGTTCTCTGGTTTGCTCTCAGTCGCTTCGCTGCTCTCCCTTCTGTTTTCAGATTCCTGGCACCACGTCCCGTACATGGTGTTCTTCATGTATTTGATGAGTGAGTGTTTTGCCTGGGTTGGAATGATAGGTCGATTGGCTTACCAGCAAGTCGTTCATAGATTTCTTTGTGTGTTATTCTACTTATTCTCACATCACAGCCGGGTGATAAGGACTCGTCAGTTGCCCCTGACATTCGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

191

Amino Acids

21.75

Weight (kDa)

9.75

Isoelectric Point (pI)

50.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 390
AciI CCGC 2 cut(s) 16, 228
AcsI RAATTY 1 cut(s) 185
AfaI GTAC 1 cut(s) 404
AfiI CCNNNNNNNGG 1 cut(s) 406
AgsI TTSAA 2 cut(s) 76, 215
AjiI CACGTC 1 cut(s) 397
AjnI CCWGG 2 cut(s) 386, 443
AluBI AGCT 2 cut(s) 252, 267
AluI AGCT 2 cut(s) 252, 267
ApeKI GCWGC 2 cut(s) 5, 361
ApoI RAATTY 1 cut(s) 185
AsuC2I CCSGG 1 cut(s) 533
AsuHPI GGTGA 2 cut(s) 160, 547
BanI GGYRCC 1 cut(s) 390
BbsI GAAGAC 1 cut(s) 195
BbvI GCAGC 1 cut(s) 348
BceAI ACGGC 1 cut(s) 311
BciT130I CCWGG 2 cut(s) 388, 445
BcnI CCSGG 1 cut(s) 533
BfaI CTAG 1 cut(s) 282
BfmI CTRYAG 1 cut(s) 6
BisI GCNGC 3 cut(s) 6, 228, 362
BlsI GCNGC 3 cut(s) 7, 229, 363
Bme1390I CCNGG 3 cut(s) 388, 445, 533
BmgBI CACGTC 1 cut(s) 397
BmiI GGNNCC 2 cut(s) 293, 392
BmrFI CCNGG 3 cut(s) 388, 445, 533
BpiI GAAGAC 1 cut(s) 195
Bpu10I CCTNAGC 1 cut(s) 287
BpuEI CTTGAG 1 cut(s) 117
BpuMI CCSGG 1 cut(s) 533
BsaJI CCNNGG 1 cut(s) 444
BsaXI ACNNNNNCTCC 4 cut(s) 190, 220, 289, 319
Bsc4I CCNNNNNNNGG 1 cut(s) 406
BseBI CCWGG 2 cut(s) 388, 445
BseDI CCNNGG 1 cut(s) 444
BseLI CCNNNNNNNGG 1 cut(s) 406
BseMII CTCAG 1 cut(s) 363
BseXI GCAGC 1 cut(s) 348
BshNI GGYRCC 1 cut(s) 390
BsiSI CCGG 1 cut(s) 532
BslFI GGGAC 1 cut(s) 383
BslI CCNNNNNNNGG 1 cut(s) 406
BsmFI GGGAC 1 cut(s) 383
BspACI CCGC 2 cut(s) 16, 228
BspCNI CTCAG 1 cut(s) 362
BspLI GGNNCC 2 cut(s) 293, 392
BspMAI CTGCAG 1 cut(s) 10
BspT107I GGYRCC 1 cut(s) 390
BssECI CCNNGG 1 cut(s) 444
Bst2UI CCWGG 2 cut(s) 388, 445
BstC8I GCNNGC 2 cut(s) 111, 250
BstDEI CTNAG 2 cut(s) 287, 349
BstMWI GCNNNNNNNGC 2 cut(s) 143, 278
BstNI CCWGG 2 cut(s) 388, 445
BstSCI CCNGG 3 cut(s) 386, 443, 531
BstSFI CTRYAG 1 cut(s) 6
BstV1I GCAGC 1 cut(s) 348
BstV2I GAAGAC 1 cut(s) 195
BtrI CACGTC 1 cut(s) 397
Cac8I GCNNGC 2 cut(s) 111, 250
Csp6I GTAC 1 cut(s) 403
CspCI CAANNNNNGTGG 2 cut(s) 220, 255
CviAII CATG 5 cut(s) 44, 224, 235, 406, 418
CviQI GTAC 1 cut(s) 403
DdeI CTNAG 2 cut(s) 287, 349
Eco32I GATATC 1 cut(s) 13
EcoRII CCWGG 2 cut(s) 386, 443
EcoRV GATATC 1 cut(s) 13
FaeI CATG 5 cut(s) 47, 227, 238, 409, 421
FalI AAGNNNNNCTT 2 cut(s) 126, 158
FaqI GGGAC 1 cut(s) 383
FatI CATG 5 cut(s) 43, 223, 234, 405, 417
Fnu4HI GCNGC 3 cut(s) 6, 228, 362
Fsp4HI GCNGC 3 cut(s) 6, 228, 362
FspBI CTAG 1 cut(s) 282
GluI GCNGC 3 cut(s) 6, 228, 362
HapII CCGG 1 cut(s) 532
Hin1II CATG 5 cut(s) 47, 227, 238, 409, 421
HinfI GANTC 3 cut(s) 53, 383, 544
HpaII CCGG 1 cut(s) 532
HphI GGTGA 2 cut(s) 160, 547
Hpy188I TCNGA 2 cut(s) 180, 382
HpyAV CCTTC 1 cut(s) 380
HpyCH4IV ACGT 3 cut(s) 71, 200, 396
HpyCH4V TGCA 2 cut(s) 8, 260
HpyF10VI GCNNNNNNNGC 2 cut(s) 143, 278
HpyF3I CTNAG 2 cut(s) 287, 349
HpySE526I ACGT 3 cut(s) 71, 200, 396
Hsp92II CATG 5 cut(s) 47, 227, 238, 409, 421
LmnI GCTCC 1 cut(s) 118
Lsp1109I GCAGC 1 cut(s) 348
MaeI CTAG 1 cut(s) 282
MaeII ACGT 3 cut(s) 71, 200, 396
MaeIII GTNAC 1 cut(s) 67
MboII GAAGA 3 cut(s) 155, 195, 406
MluCI AATT 1 cut(s) 185
MlyI GAGTC 1 cut(s) 538
MmeI TCCRAC 2 cut(s) 214, 430
MseI TTAA 2 cut(s) 183, 197
MslI CAYNNNNRTG 1 cut(s) 48
MspI CCGG 1 cut(s) 532
MspR9I CCNGG 3 cut(s) 388, 445, 533
MvaI CCWGG 2 cut(s) 388, 445
MwoI GCNNNNNNNGC 2 cut(s) 143, 278
NciI CCSGG 1 cut(s) 533
NlaIII CATG 5 cut(s) 47, 227, 238, 409, 421
NlaIV GGNNCC 2 cut(s) 293, 392
NmuCI GTSAC 1 cut(s) 67
PfeI GAWTC 2 cut(s) 53, 383
PkrI GCNGC 3 cut(s) 7, 229, 363
PleI GAGTC 1 cut(s) 538
PpsI GAGTC 1 cut(s) 538
Psp6I CCWGG 2 cut(s) 386, 443
PspGI CCWGG 2 cut(s) 386, 443
PspN4I GGNNCC 2 cut(s) 293, 392
PsrI GAACNNNNNNTAC 2 cut(s) 395, 427
PstI CTGCAG 1 cut(s) 10
RsaI GTAC 1 cut(s) 404
RsaNI GTAC 1 cut(s) 403
RseI CAYNNNNRTG 1 cut(s) 48
SaqAI TTAA 2 cut(s) 183, 197
SatI GCNGC 3 cut(s) 6, 228, 362
SchI GAGTC 1 cut(s) 538
ScrFI CCNGG 3 cut(s) 388, 445, 533
SfcI CTRYAG 1 cut(s) 6
SmiMI CAYNNNNRTG 1 cut(s) 48
SmlI CTYRAG 1 cut(s) 132
SmoI CTYRAG 1 cut(s) 132
Sse9I AATT 1 cut(s) 185
SsiI CCGC 2 cut(s) 16, 228
SspMI CTAG 1 cut(s) 282
StyD4I CCNGG 3 cut(s) 386, 443, 531
TaiI ACGT 3 cut(s) 74, 203, 399
TaqI TCGA 1 cut(s) 463
TasI AATT 1 cut(s) 185
TauI GCSGC 1 cut(s) 230
TfiI GAWTC 2 cut(s) 53, 383
Tru1I TTAA 2 cut(s) 183, 197
Tru9I TTAA 2 cut(s) 183, 197
TseFI GTSAC 1 cut(s) 67
TseI GCWGC 2 cut(s) 5, 361
Tsp45I GTSAC 1 cut(s) 67
TspDTI ATGAA 2 cut(s) 406, 476
XapI RAATTY 1 cut(s) 185
XspI CTAG 1 cut(s) 282
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.