Rorug01G0206500

sphingolipid transporter spinster homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000574
Physical Location & Seq
Forward (+)
28992113 .. 28995989
3877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0206500.1

Sequence Viewer

Length: 1881 bp
ATGGTACGTATTTACTTTGTGGACTACTTTGGTGAGACTGATGTATATGAGGTTTTGTTGTTGCAGTACGTGGTGTTAGCTCCTTGGGTGATTAACAGCACATACTCATATATGTTTGGAGAAGAAGGCACAGATCTATTTTACGTCCTCGTATTTCCATTTCTGTTGTGGAGGATGCTCCACAACCAGATATGGATCTCACTTTCTCGCTATCAAACTGCCAAAGGCAAAGGAACAATCGTGGACAAGGGCCTCGAATTTGAACAAGTCGACAGAGAAAGAGATTGGGATGATCAAATCATATTCAATGGAATGCTGTTTTACATAGGCAGGTTTCTGGCCAGGTGCGTCCTGCCTAGGGCTCAAACTGACCTACCAATTTGGAGGGGAGATGGGTTGGTCATGACGATGCTGCTTCATGCTGGTCCGGTCGAGTATCTCTACTACTGGTTACACAGAGCACTTCACCACCATTTCCTCTACTCTCGCTACCATTCTCATCACCATTCCTCCATTGTCACTGAGCCAATTACTTCTGTGACTCACCCATTTGCGGAGCACATAACATATTTCATGCTCTTCGCAATACCAATGGTGGCAACTCTGTTGATCGGAACAGCTTCCATCTCATCCTATTTTGTTTATATTACTTATATCGACTTCATGAACAACTTGGGACACTGCAATTTCGAGTTCATTCCGAACTGGATCTTCTCTCTTTTTCCTCCTCTTAAGTATCTAATATATACTCCCTCGTACCACTCTTTGCATCACACACAATTTCGAACCAATTACTCTCTCTTCATGCCAGTCTATGACTATATATATGGTACCATGGACAAGTCTAGTGATACCCTATATGAATCTTCACTCAGGAAAGAAGAATCACCTGATGTGGTTCATCTAACCCATTTAACAACAACTGAATCCATCTACCGACTCCCACTGGCATTTGCTTCCTTGGCCTCTAATCCACACACTTCAACATGGTACTTATGGTTGTTGTGGCCGGTGACATTATGGTCCTTGATGCTAACTTGGATATTTGGCCGTTCATTTGTTATTGAGAGGCAGCGTTTTGATAAACACAGACTACAAACTTGGGTTATTCCAAAATATAGTTTGCAGTACTTGCTCTCATGGAAAAATGAAGCTATAAATAGAGCGATTGAGGATGCCATACTAGAAGCTGAGCAAATGGGCGTCAAAGTTATAAGTTTAGGTCTCTTTAATCAGGGTGAGAGGCTCAATAATAATGGTGGTATATATGTTCAGAGGAATCCACGGCTGAAAATCAAGGTGGTGGATGGGAGTAGCTTAGCTGTGGCTGTCATCCTTAACAGCATTCCGAAAGGAACAACCCAGGTTCTCCTTGCAGGCAGCCTCACAAAGGTAGCTTATGCCCTTGCCTTTTCTTTGTGCCAGAGAGATATCCAGGTAGTTACATTACAGCAGGCTGAGTATTTGAAGCTCACCAAATCATTAAATGCTGCAGAGGGTAAGGTGGTTCATGACAGAAGCTATGCTCAAAAGGTTTGGTTGGTGGGAGATGGGTTGAGTAAAAAAGAACAGTTGAGTGCACCAAAAGGAACAATTTTTGTTCCCTTCTCTCAATTTCCACCAAAACAGTTGCGCAGAGACTGCTTCTACCACTACACACCAGCAATGAAGATCCCCAAGTCTCTTGAGAATGTTTACTCTTGCGAGAACTGGTTGCCAAGGAGGGTGATGAGTGCGTGGCGTATAGCAGGAATAGTGCATGCATTGGAAGGTTGGCATGAGCACGAGTGTGGTTACACCATGTCCAGCATTGACAAAGTTTGGCAAGCAACTCTTCGACATGGCTTTCAGCCTCTAAATCTCCAAAGAGGCAAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 OATP

Protein Analysis

626

Amino Acids

72.88

Weight (kDa)

8.46

Isoelectric Point (pI)

31.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_hydroxylase PF04116 142 - 278 8e-21 Fatty acid hydroxylase
CER1-like_C PF12076 456 - 618 1.7e-73 CER1-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1214
AasI GACNNNNNNGTC 1 cut(s) 1021
Acc16I TGCGCA 1 cut(s) 1634
Acc36I ACCTGC 1 cut(s) 321
Acc65I GGTACC 1 cut(s) 830
AccB1I GGYRCC 1 cut(s) 830
AccI GTMKAC 1 cut(s) 270
AciI CCGC 1 cut(s) 554
AclWI GGATC 3 cut(s) 203, 716, 1666
AcoI YGGCCR 3 cut(s) 339, 1007, 1048
AcsI RAATTY 1 cut(s) 257
AcyI GRCGYC 1 cut(s) 1203
AfaI GTAC 6 cut(s) 6, 68, 758, 832, 992, 1130
AfiI CCNNNNNNNGG 3 cut(s) 358, 553, 1390
AflII CTTAAG 1 cut(s) 731
AgsI TTSAA 4 cut(s) 263, 307, 984, 1468
AjnI CCWGG 3 cut(s) 341, 1362, 1434
AleI CACNNNNGTG 1 cut(s) 1788
AluBI AGCT 9 cut(s) 80, 620, 1154, 1190, 1317, 1322, 1397, 1471, 1521
AluI AGCT 9 cut(s) 80, 620, 1154, 1190, 1317, 1322, 1397, 1471, 1521
Alw21I GWGCWC 4 cut(s) 463, 561, 1582, 1785
Alw26I GTCTC 4 cut(s) 29, 1229, 1632, 1686
Alw44I GTGCAC 1 cut(s) 1578
AlwI GGATC 3 cut(s) 203, 716, 1666
AlwNI CAGNNNCTG 1 cut(s) 1641
AoxI GGCC 5 cut(s) 250, 339, 963, 1007, 1048
ApaLI GTGCAC 1 cut(s) 1578
ApeKI GCWGC 4 cut(s) 412, 1072, 1380, 1490
ApoI RAATTY 1 cut(s) 257
Asp700I GAANNNNTTC 1 cut(s) 619
Asp718I GGTACC 1 cut(s) 830
AspA2I CCTAGG 1 cut(s) 356
AspLEI GCGC 1 cut(s) 1635
AspS9I GGNCC 3 cut(s) 250, 425, 1023
AsuII TTCGAA 1 cut(s) 784
AvaII GGWCC 2 cut(s) 425, 1023
AvrII CCTAGG 1 cut(s) 356
BaeGI GKGCMC 1 cut(s) 1582
BalI TGGCCA 1 cut(s) 341
BanI GGYRCC 1 cut(s) 830
BanII GRGCYC 1 cut(s) 364
BauI CACGAG 1 cut(s) 1784
Bbv12I GWGCWC 4 cut(s) 463, 561, 1582, 1785
BbvI GCAGC 4 cut(s) 399, 1084, 1392, 1477
BccI CCATC 5 cut(s) 386, 632, 938, 1301, 1544
BceAI ACGGC 2 cut(s) 1035, 1301
BciT130I CCWGG 3 cut(s) 343, 1364, 1436
BclI TGATCA 1 cut(s) 292
BcoDI GTCTC 4 cut(s) 29, 1229, 1632, 1686
BfaI CTAG 3 cut(s) 357, 846, 1184
BfmI CTRYAG 1 cut(s) 1491
BfrI CTTAAG 1 cut(s) 731
BfuAI ACCTGC 1 cut(s) 321
BglII AGATCT 1 cut(s) 133
BisI GCNGC 4 cut(s) 413, 1073, 1381, 1491
BlnI CCTAGG 1 cut(s) 356
BlpI GCTNAGC 2 cut(s) 1191, 1318
BlsI GCNGC 4 cut(s) 414, 1074, 1382, 1492
BmcAI AGTACT 1 cut(s) 1130
Bme1390I CCNGG 3 cut(s) 343, 1364, 1436
Bme18I GGWCC 2 cut(s) 425, 1023
BmgT120I GGNCC 3 cut(s) 250, 425, 1023
BmiI GGNNCC 1 cut(s) 832
BmrFI CCNGG 3 cut(s) 343, 1364, 1436
BmsI GCATC 5 cut(s) 165, 399, 778, 1020, 1165
Bpu1102I GCTNAGC 2 cut(s) 1191, 1318
Bpu14I TTCGAA 1 cut(s) 784
BpuEI CTTGAG 1 cut(s) 1706
BsaAI YACGTR 2 cut(s) 8, 70
BsaBI GATNNNNATC 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 1203
BsaI GGTCTC 1 cut(s) 1229
BsaJI CCNNGG 7 cut(s) 83, 356, 834, 960, 1283, 1362, 1718
BsaWI WCCGGW 1 cut(s) 427
BsaXI ACNNNNNCTCC 2 cut(s) 494, 524
Bsc4I CCNNNNNNNGG 3 cut(s) 358, 553, 1390
Bse118I RCCGGY 1 cut(s) 1009
Bse1I ACTGG 5 cut(s) 452, 710, 809, 951, 1715
Bse3DI GCAATG 1 cut(s) 1671
Bse8I GATNNNNATC 1 cut(s) 194
BseBI CCWGG 3 cut(s) 343, 1364, 1436
BseDI CCNNGG 7 cut(s) 83, 356, 834, 960, 1283, 1362, 1718
BseGI GGATG 6 cut(s) 180, 295, 629, 1180, 1312, 1332
BseJI GATNNNNATC 1 cut(s) 194
BseLI CCNNNNNNNGG 3 cut(s) 358, 553, 1390
BseMI GCAATG 1 cut(s) 1671
BseMII CTCAG 4 cut(s) 513, 886, 1182, 1449
BseNI ACTGG 5 cut(s) 452, 710, 809, 951, 1715
BseRI GAGGAG 1 cut(s) 717
BseSI GKGCMC 1 cut(s) 1582
BseXI GCAGC 4 cut(s) 399, 1084, 1392, 1477
Bsh1285I CGRYCG 1 cut(s) 432
BshFI GGCC 5 cut(s) 252, 341, 965, 1009, 1050
BshNI GGYRCC 1 cut(s) 830
BsiEI CGRYCG 1 cut(s) 432
BsiHKAI GWGCWC 4 cut(s) 463, 561, 1582, 1785
BsiSI CCGG 2 cut(s) 428, 1010
BslFI GGGAC 1 cut(s) 690
BslI CCNNNNNNNGG 3 cut(s) 358, 553, 1390
BsmAI GTCTC 4 cut(s) 29, 1229, 1632, 1686
BsmFI GGGAC 1 cut(s) 690
BsmI GAATGC 2 cut(s) 318, 1344
BsnI GGCC 5 cut(s) 252, 341, 965, 1009, 1050
Bso31I GGTCTC 1 cut(s) 1229
Bsp119I TTCGAA 1 cut(s) 784
Bsp1286I GDGCHC 5 cut(s) 364, 463, 561, 1582, 1785
Bsp143I GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
Bsp1720I GCTNAGC 2 cut(s) 1191, 1318
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 1 cut(s) 554
BspANI GGCC 5 cut(s) 252, 341, 965, 1009, 1050
BspCNI CTCAG 4 cut(s) 514, 885, 1183, 1450
BspHI TCATGA 3 cut(s) 402, 663, 1510
BspLI GGNNCC 1 cut(s) 832
BspMAI CTGCAG 1 cut(s) 1495
BspMI ACCTGC 1 cut(s) 321
BspPI GGATC 3 cut(s) 203, 716, 1666
BspQI GCTCTTC 1 cut(s) 584
BspT104I TTCGAA 1 cut(s) 784
BspT107I GGYRCC 1 cut(s) 830
BspTI CTTAAG 1 cut(s) 731
BspTNI GGTCTC 1 cut(s) 1229
BsrDI GCAATG 1 cut(s) 1671
BsrFI RCCGGY 1 cut(s) 1009
BsrI ACTGG 5 cut(s) 452, 710, 809, 951, 1715
BssAI RCCGGY 1 cut(s) 1009
BssECI CCNNGG 7 cut(s) 83, 356, 834, 960, 1283, 1362, 1718
BssMI GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
BssNI GRCGYC 1 cut(s) 1203
BssSI CACGAG 1 cut(s) 1784
BssT1I CCWWGG 5 cut(s) 83, 356, 834, 960, 1718
Bst2BI CACGAG 1 cut(s) 1784
Bst2UI CCWGG 3 cut(s) 343, 1364, 1436
Bst4CI ACNGT 2 cut(s) 1572, 1629
Bst6I CTCTTC 3 cut(s) 584, 806, 1839
BstACI GRCGYC 1 cut(s) 1203
BstAFI CTTAAG 1 cut(s) 731
BstAPI GCANNNNNTGC 2 cut(s) 1132, 1641
BstBAI YACGTR 2 cut(s) 8, 70
BstBI TTCGAA 1 cut(s) 784
BstC8I GCNNGC 4 cut(s) 1378, 1455, 1761, 1827
BstDEI CTNAG 5 cut(s) 522, 872, 1191, 1318, 1458
BstDSI CCRYGG 2 cut(s) 834, 1283
BstENI CCTNNNNNAGG 1 cut(s) 1388
BstF5I GGATG 6 cut(s) 180, 295, 629, 1180, 1312, 1332
BstHHI GCGC 1 cut(s) 1635
BstKTI GATC 6 cut(s) 136, 198, 295, 612, 711, 1674
BstMAI GTCTC 4 cut(s) 29, 1229, 1632, 1686
BstMBI GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
BstMCI CGRYCG 1 cut(s) 432
BstMWI GCNNNNNNNGC 3 cut(s) 962, 1132, 1641
BstNI CCWGG 3 cut(s) 343, 1364, 1436
BstNSI RCATGY 1 cut(s) 1763
BstSCI CCNGG 3 cut(s) 341, 1362, 1434
BstSFI CTRYAG 1 cut(s) 1491
BstSLI GKGCMC 1 cut(s) 1582
BstSNI TACGTA 1 cut(s) 8
BstV1I GCAGC 4 cut(s) 399, 1084, 1392, 1477
BstX2I RGATCY 4 cut(s) 133, 195, 708, 1671
BstYI RGATCY 4 cut(s) 133, 195, 708, 1671
BsuRI GGCC 5 cut(s) 252, 341, 965, 1009, 1050
BtgI CCRYGG 2 cut(s) 834, 1283
BtsCI GGATG 6 cut(s) 180, 295, 629, 1180, 1312, 1332
BtsI GCAGTG 1 cut(s) 679
BtsIMutI CAGTG 3 cut(s) 519, 679, 944
BveI ACCTGC 1 cut(s) 321
Cac8I GCNNGC 4 cut(s) 1378, 1455, 1761, 1827
CaiI CAGNNNCTG 1 cut(s) 1641
CciI TCATGA 3 cut(s) 402, 663, 1510
CfoI GCGC 1 cut(s) 1635
Cfr10I RCCGGY 1 cut(s) 1009
Cfr13I GGNCC 3 cut(s) 250, 425, 1023
CseI GACGC 2 cut(s) 337, 1192
Csp6I GTAC 6 cut(s) 5, 67, 757, 831, 991, 1129
CviQI GTAC 6 cut(s) 5, 67, 757, 831, 991, 1129
DdeI CTNAG 5 cut(s) 522, 872, 1191, 1318, 1458
DpnI GATC 6 cut(s) 135, 197, 294, 611, 710, 1673
DpnII GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
DrdI GACNNNNNNGTC 1 cut(s) 1021
DseDI GACNNNNNNGTC 1 cut(s) 1021
EaeI YGGCCR 3 cut(s) 339, 1007, 1048
Eam1104I CTCTTC 3 cut(s) 584, 806, 1839
EarI CTCTTC 3 cut(s) 584, 806, 1839
Eco105I TACGTA 1 cut(s) 8
Eco130I CCWWGG 5 cut(s) 83, 356, 834, 960, 1718
Eco24I GRGCYC 1 cut(s) 364
Eco31I GGTCTC 1 cut(s) 1229
Eco32I GATATC 1 cut(s) 1432
Eco47I GGWCC 2 cut(s) 425, 1023
EcoNI CCTNNNNNAGG 1 cut(s) 1388
EcoO109I RGGNCCY 1 cut(s) 250
EcoRII CCWGG 3 cut(s) 341, 1362, 1434
EcoRV GATATC 1 cut(s) 1432
EcoT14I CCWWGG 5 cut(s) 83, 356, 834, 960, 1718
EcoT22I ATGCAT 1 cut(s) 1765
EcoT38I GRGCYC 1 cut(s) 364
ErhI CCWWGG 5 cut(s) 83, 356, 834, 960, 1718
FalI AAGNNNNNCTT 2 cut(s) 1818, 1850
FaqI GGGAC 1 cut(s) 690
FbaI TGATCA 1 cut(s) 292
FblI GTMKAC 1 cut(s) 270
Fnu4HI GCNGC 4 cut(s) 413, 1073, 1381, 1491
FokI GGATG 6 cut(s) 187, 302, 616, 1187, 1319, 1319
FriOI GRGCYC 1 cut(s) 364
Fsp4HI GCNGC 4 cut(s) 413, 1073, 1381, 1491
FspBI CTAG 3 cut(s) 357, 846, 1184
FspI TGCGCA 1 cut(s) 1634
GlaI GCGC 1 cut(s) 1634
GluI GCNGC 4 cut(s) 413, 1073, 1381, 1491
HaeIII GGCC 5 cut(s) 252, 341, 965, 1009, 1050
HapII CCGG 2 cut(s) 428, 1010
HgaI GACGC 2 cut(s) 337, 1192
HhaI GCGC 1 cut(s) 1635
Hin1I GRCGYC 1 cut(s) 1203
Hin6I GCGC 1 cut(s) 1633
HinP1I GCGC 1 cut(s) 1633
HincII GTYRAC 1 cut(s) 271
HindII GTYRAC 1 cut(s) 271
HinfI GANTC 6 cut(s) 541, 863, 884, 926, 939, 1279
HpaII CCGG 2 cut(s) 428, 1010
Hpy166II GTNNAC 5 cut(s) 22, 244, 271, 1580, 1696
Hpy188I TCNGA 4 cut(s) 614, 702, 1275, 1350
Hpy188III TCNNGA 5 cut(s) 403, 664, 874, 1511, 1685
Hpy8I GTNNAC 5 cut(s) 22, 244, 271, 1580, 1696
HpyAV CCTTC 3 cut(s) 119, 1615, 1763
HpyCH4III ACNGT 2 cut(s) 1572, 1629
HpyCH4IV ACGT 3 cut(s) 7, 69, 144
HpyCH4V TGCA 9 cut(s) 64, 684, 769, 1126, 1376, 1493, 1580, 1759, 1763
HpyF10VI GCNNNNNNNGC 3 cut(s) 962, 1132, 1641
HpyF3I CTNAG 5 cut(s) 522, 872, 1191, 1318, 1458
HpySE526I ACGT 3 cut(s) 7, 69, 144
Hsp92I GRCGYC 1 cut(s) 1203
HspAI GCGC 1 cut(s) 1633
KpnI GGTACC 1 cut(s) 834
Ksp22I TGATCA 1 cut(s) 292
Kzo9I GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
LguI GCTCTTC 1 cut(s) 584
LmnI GCTCC 3 cut(s) 85, 183, 556
Lsp1109I GCAGC 4 cut(s) 399, 1084, 1392, 1477
LweI GCATC 5 cut(s) 165, 399, 778, 1020, 1165
MaeI CTAG 3 cut(s) 357, 846, 1184
MaeII ACGT 3 cut(s) 7, 69, 144
MaeIII GTNAC 6 cut(s) 450, 517, 538, 1012, 1441, 1793
MalI GATC 6 cut(s) 135, 197, 294, 611, 710, 1673
MboI GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
MboII GAAGA 8 cut(s) 134, 571, 703, 793, 858, 893, 1681, 1826
MflI RGATCY 4 cut(s) 133, 195, 708, 1671
MhlI GDGCHC 5 cut(s) 364, 463, 561, 1582, 1785
MlsI TGGCCA 1 cut(s) 341
MluCI AATT 8 cut(s) 257, 378, 528, 685, 779, 790, 1593, 1613
MluNI TGGCCA 1 cut(s) 341
MlyI GAGTC 2 cut(s) 535, 933
Mox20I TGGCCA 1 cut(s) 341
Mph1103I ATGCAT 1 cut(s) 1765
MroXI GAANNNNTTC 1 cut(s) 619
MscI TGGCCA 1 cut(s) 341
MseI TTAA 6 cut(s) 93, 732, 914, 1230, 1338, 1484
MslI CAYNNNNRTG 2 cut(s) 407, 1788
Msp20I TGGCCA 1 cut(s) 341
MspCI CTTAAG 1 cut(s) 731
MspI CCGG 2 cut(s) 428, 1010
MspR9I CCNGG 3 cut(s) 343, 1364, 1436
Mva1269I GAATGC 2 cut(s) 318, 1344
MvaI CCWGG 3 cut(s) 343, 1364, 1436
MwoI GCNNNNNNNGC 3 cut(s) 962, 1132, 1641
NcoI CCATGG 1 cut(s) 834
NdeII GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
NlaIV GGNNCC 1 cut(s) 832
NmuCI GTSAC 3 cut(s) 517, 538, 1012
NsbI TGCGCA 1 cut(s) 1634
NsiI ATGCAT 1 cut(s) 1765
NspI RCATGY 1 cut(s) 1763
NspV TTCGAA 1 cut(s) 784
OliI CACNNNNGTG 1 cut(s) 1788
PaeI GCATGC 1 cut(s) 1763
PagI TCATGA 3 cut(s) 402, 663, 1510
PciSI GCTCTTC 1 cut(s) 584
PctI GAATGC 2 cut(s) 318, 1344
PdmI GAANNNNTTC 1 cut(s) 619
PfeI GAWTC 4 cut(s) 863, 884, 926, 1279
PkrI GCNGC 4 cut(s) 414, 1074, 1382, 1492
PleI GAGTC 2 cut(s) 535, 933
PpsI GAGTC 2 cut(s) 535, 933
Ppu21I YACGTR 2 cut(s) 8, 70
PsiI TTATAA 1 cut(s) 1214
Psp6I CCWGG 3 cut(s) 341, 1362, 1434
PspGI CCWGG 3 cut(s) 341, 1362, 1434
PspN4I GGNNCC 1 cut(s) 832
PspPI GGNCC 3 cut(s) 250, 425, 1023
PstI CTGCAG 1 cut(s) 1495
PstNI CAGNNNCTG 1 cut(s) 1641
PsuI RGATCY 4 cut(s) 133, 195, 708, 1671
RsaI GTAC 6 cut(s) 6, 68, 758, 832, 992, 1130
RsaNI GTAC 6 cut(s) 5, 67, 757, 831, 991, 1129
RseI CAYNNNNRTG 2 cut(s) 407, 1788
SalI GTCGAC 1 cut(s) 269
SapI GCTCTTC 1 cut(s) 584
SaqAI TTAA 6 cut(s) 93, 732, 914, 1230, 1338, 1484
SatI GCNGC 4 cut(s) 413, 1073, 1381, 1491
Sau3AI GATC 6 cut(s) 133, 195, 292, 609, 708, 1671
Sau96I GGNCC 3 cut(s) 250, 425, 1023
ScaI AGTACT 1 cut(s) 1130
SchI GAGTC 2 cut(s) 535, 933
ScrFI CCNGG 3 cut(s) 343, 1364, 1436
SduI GDGCHC 5 cut(s) 364, 463, 561, 1582, 1785
SfaNI GCATC 5 cut(s) 165, 399, 778, 1020, 1165
SfcI CTRYAG 1 cut(s) 1491
SfuI TTCGAA 1 cut(s) 784
SinI GGWCC 2 cut(s) 425, 1023
SmiMI CAYNNNNRTG 2 cut(s) 407, 1788
SmlI CTYRAG 2 cut(s) 731, 1685
SmoI CTYRAG 2 cut(s) 731, 1685
SnaBI TACGTA 1 cut(s) 8
SphI GCATGC 1 cut(s) 1763
Sse9I AATT 8 cut(s) 257, 378, 528, 685, 779, 790, 1593, 1613
SsiI CCGC 1 cut(s) 554
SspMI CTAG 3 cut(s) 357, 846, 1184
StyD4I CCNGG 3 cut(s) 341, 1362, 1434
StyI CCWWGG 5 cut(s) 83, 356, 834, 960, 1718
TaaI ACNGT 2 cut(s) 1572, 1629
TaiI ACGT 3 cut(s) 10, 72, 147
TaqI TCGA 7 cut(s) 255, 270, 432, 657, 690, 784, 1837
TasI AATT 8 cut(s) 257, 378, 528, 685, 779, 790, 1593, 1613
TatI WGTACW 1 cut(s) 1128
TfiI GAWTC 4 cut(s) 863, 884, 926, 1279
Tru1I TTAA 6 cut(s) 93, 732, 914, 1230, 1338, 1484
Tru9I TTAA 6 cut(s) 93, 732, 914, 1230, 1338, 1484
TscAI CASTG 3 cut(s) 526, 686, 951
TseFI GTSAC 3 cut(s) 517, 538, 1012
TseI GCWGC 4 cut(s) 412, 1072, 1380, 1490
Tsp45I GTSAC 3 cut(s) 517, 538, 1012
TspRI CASTG 3 cut(s) 526, 686, 951
Vha464I CTTAAG 1 cut(s) 731
VneI GTGCAC 1 cut(s) 1578
VpaK11BI GGWCC 2 cut(s) 425, 1023
XagI CCTNNNNNAGG 1 cut(s) 1388
XapI RAATTY 1 cut(s) 257
XceI RCATGY 1 cut(s) 1763
XcmI CCANNNNNNNNNTGG 1 cut(s) 165
XmaJI CCTAGG 1 cut(s) 356
XmiI GTMKAC 1 cut(s) 270
XmnI GAANNNNTTC 1 cut(s) 619
XspI CTAG 3 cut(s) 357, 846, 1184
ZrmI AGTACT 1 cut(s) 1130
Zsp2I ATGCAT 1 cut(s) 1765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.