Prupe.8G077200_v2.0.a1

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000400
Physical Location & Seq
Forward (+)
11143398 .. 11148272
4875 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G077200.1

Sequence Viewer

Length: 3618 bp
ATGGAAGCAGCAAACATAGTTTTATCCCCTGCTTTGCAAGTGATCTTTGACAGACTGGCATCCCCAGTCCTACAAAAGGCTGCTGATTTCTTGGGTTTTGACGACAACTTCCGGGGTCTACAACATGCCGTGGAGAGGGCTCAAGCTACTCTTGAAGATGCAGAAGATCAACAATTCACCAGCAGAGCTGTCAGACTTTGGTTGTCAAAGCTCAAGAATGCAGCTTATGATGCTGAGGACTACCTGCACTACTTGACTGCAAAAAGAATGAGAAATGGGAGCGATTATGACGACATGATAGGGATACCACCAGTTAAGAATCATTTTCAACTTGGAGACCTTATGCATGCTACCCAAACTGGTGCAGTGCTCCGGGCTTTAGAAGCAACTATAAATGAGGGGCTCAGTGAGTTTAATTTTAAAGCGCCTAGTATGGAAGATGGTCAAACTACCATAAGAGAGACTAGTTCTTTTGTCATCGAGTCAGAGATATATGGAAGAGAAGATGACAAAGAGAAGTTGGTCAAACTGTTAATATTTTCTGAAGCTTGCCAGGAAGGATATGCAACATGTATTTCAATATTTGGTATTGGAGGAATTGGTAAGACCACTCTTGCTCAATTGGGATATAATGATGAAAGGGTAATCCACCACTTTGATGTTAGGATGTGGATTTTTGTCTCTGATGATTTCAATGTTAAGAAGATCATGAAAGCAATTATTGAGTCTGCAACTAAGGATGAATGCAAGTTGTCTGAGATTGACCTACTTCAGTCTCGGATTTGGAATTTGTTGCACAATAAAAGATATCTCATTGTGTTAGATGATATTTGGACTGAAAACCAGGATGATTGGGACAAACTACGACCTTTGTTCAGAGGGGGTGTTGATGGATGCAAAATCATTGTCACCACCCGCAATACAAAAACAGCAGTCATGACAGACTCCCCAAATTCCCCATTTTATTTGAAGGGTTTAGCAGAGGATGATTGCTGGGCCTTGTTCAAGCAACGGGCTTTTGGGCGAACTGAAGAAGAGAAGTATCCCTGGCTTTTGTCAATTGGAAAGCAAATAGTTAAAAAATGTGGAGGTGTGCCATTAGCAGTAAAAAGTTTGGGAAGTTTAATGCGCTTTAAAAGAGAGAAGCAGCAGTGGTTGTTTATGCAAAATAGTGATCTCTGGAAACTAGATGCATGCCAAAATAAAGTTTTACCCGCCCTGATGTTGAGTTATATTCATCTCCCATCACATCTTAAACAGTGCTTTGCATTCTGCTCAATCTTTCCGAGAAATTATGAATTCAAGAAGCAGAAGTTAATTTATCTATGGATGGCAGAAGGATTAATTCTACAAGGAGGAAGCAAGCGACCAGAAGACATCGGTGAAGACTACTTTGCTGATTTGTTGTGGATGTCTTTCTTTCAAGAAGTAGAGTTATGTGAGGGTGTCAGTATAACTGGATACAAAATGAATGATGTCATTCATGATCTTGCACGATATGTTGCAGGAAAGGAATATGTGATACTTGAACAGGGTGCCCCACCAAATGGACCAGCACAAATTCGTCATTCCTCTGTGGTTTATACGTATGGAGAAATTACAATTCCAGAAGCTCTATATGAGGAAAAACATTTACGAACTCTCCTATTGATTGGAGAATCCGGCTCATTAAGATCCATTGGAAAAATGTTTTCGACTTTTGTTTACTTGCGTTCGCTGGATCTGAGCAGCTGCACTGTTTACAATTTACCAGAATCGTTGGGTATTATGATATGCTTGAGGTTTCTTGACGTCTCTTACACACCTATTCATCTGTTACCTGAAAGCACAAGCAAACTTTGTGCTCTGCAGACTTTAAACCTTTTTGGTTGTCATAATCTTAGGAGCTTGCCTTTCTTAGGAGGCATGACCGACCTAAGACATCTCAATATAACTGGATGCCAAAGTTTGGACGGGATGTGTTCTGGTATTGTAAAGTTACACCAACTTCAGACATTGCCATTATTTGTTGTTAGCTGGGAGATCGTGCATGCCTTAAGTGCCAGTAAGATCAATTTGGATATGAGTCTCAGAGCTCTGCAACATTTAAATCTTTATGGAAAGTTAAATATTATACAGTTGGGGAGAGTTAGAAATGCATCCATAGCACATTATGCTGGATTGAACACGAAGGAAAATCTTGAGTTGTTGGGATTATACTGGGGACTATACCAGGGATTTGAAGGTTTGGACGATTCATTCACGAAACTACATAAAGCCCAACATAAATTAGACATCTCAGGATCAAACATAGGTCCAGAACAGCATGAATCTGATTGTAGAGTGGCCGAAGAAATTCTTGAAGGCCTGCAGCCACACAATAATCTGAAAATTCTAGTTATACATGGGTATCCAGGAATCAAATTTCCTCGTTGGGCACTACCTAATATAGTTTCATGTCATTTGGCCTATTGTAGAAACTGTGAACATCTTCCTGCCCTTGGAAGTTTGCTGCTACTTAAGACTGTTTCTCTGCATCGAATGGATGCTGTGAGATGCATTGGTACAGAGTTCTATGGTGATGGGGCAGACATACGGTTTCCATCACTTGAAGAACTATCAATCAGTGATTTTGCGAACTTAGAGGAGTGGTCAAGTGCAAATGATGGAAATGCATTCCCTAGATTGAAGAAATTAACTGTCAAAAGTTGTCCCAAGTTAGCACATATAACCTTATGTCAGTCACTTCAACATTTGGAGCTGCGGGATTGTAATCCAACATCAATGTCCACAGCAAATTTAACTCTCCTTTCTGTGCTTGTTATAGAAAAAATTCCAGAGCTATCCTGTCTCCCAGAAGGGTTTTTAGCATCAGCTCATCTGTCTTCTCTAGAGATCTTGTGTTGCCCCAAGCTTCATTTACTTCCTTCAGAGATGGGAAACCTTACTTCTCTGAAATCATTAACCATTCGTTGTTGTGAACAGCTGTCCTCTCTTCCACAGACTTTGCAAAACCTCAAATCTCTGCACTCACTAGAGATTAGTGGTTGTCACAGTATTATGTCCATGCCAGATGGTGGAATTGGAAGTTTGTGTTCCCTTCGGACTTTGTTCATTGAGAGCTGCAGTAATCTGATTTCTCTGTCATCAAGTTTGGAGCATCTCACATGCCTTGAACACTTGAGCATTATGAATTGTCCATATCTTGGTTCTTTCCCAGAGGGTGTACAACACCTCTCCTCTCTTCGGAGTTTGACTATCTTGAGCTGTCCTTGGTTTGATGCTCTGCCAAATGGGTTACAAAATGTCCCGACACTGCACTGCTTGGAAACTATTAGCTGCCCTAATCTAACAGCTTTGCCAGAATGGTTTGGGAATCTTGCTTCGCTTCGATCTTTGACCATATCTGATTGTCCTAAATTAAAAGTATTGCCACCAGGTCAAAAGTTTCTCAAAAAACTCCAACACCTCTCTATTCAAGAATGTCCGGAGCTCGAGCAAAGATGTAGACCAGGAAATGGTGAGGATTGGATGAAAATAGCACATGTCCCACATAAGTATATTGGATCACCTCAGGTCAGCCAGTCCGGTGAAGCAAGCACATCGGGCAGCTCTTCTGTTCAAACAGCTTATCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1206

Amino Acids

134.97

Weight (kDa)

6.11

Isoelectric Point (pI)

53.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1794
Acc36I ACCTGC 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 1535
AccB7I CCANNNNNTGG 5 cut(s) 1547, 1948, 3056, 3185, 3497
AccI GTMKAC 2 cut(s) 118, 3487
AccIII TCCGGA 1 cut(s) 3466
AciI CCGC 3 cut(s) 916, 1215, 2743
AclWI GGATC 4 cut(s) 1668, 1728, 2290, 3553
AcoI YGGCCR 1 cut(s) 2325
AcsI RAATTY 9 cut(s) 787, 952, 1298, 1560, 2334, 2370, 2402, 2776, 2811
AcuI CTGAAG 5 cut(s) 564, 755, 1050, 1973, 2892
AcyI GRCGYC 1 cut(s) 1791
AfaI GTAC 2 cut(s) 2545, 3207
AflII CTTAAG 2 cut(s) 2035, 2498
AflIII ACRYGT 2 cut(s) 569, 3523
AhlI ACTAGT 1 cut(s) 464
AjnI CCWGG 7 cut(s) 552, 843, 1046, 2211, 2392, 3415, 3490
Alw21I GWGCWC 4 cut(s) 372, 1846, 2077, 3474
Alw26I GTCTC 7 cut(s) 330, 455, 685, 780, 1798, 2072, 2834
AlwI GGATC 4 cut(s) 1668, 1728, 2290, 3553
Ama87I CYCGRG 1 cut(s) 3473
Aor13HI TCCGGA 1 cut(s) 3466
AoxI GGCC 4 cut(s) 996, 2325, 2344, 2445
ApoI RAATTY 9 cut(s) 787, 952, 1298, 1560, 2334, 2370, 2402, 2776, 2811
ArsI GACNNNNNNTTYG 2 cut(s) 891, 923
AseI ATTAAT 1 cut(s) 1343
Asp700I GAANNNNTTC 3 cut(s) 2334, 2469, 2811
AspLEI GCGC 2 cut(s) 427, 1131
AspS9I GGNCC 3 cut(s) 996, 1550, 2294
AsuC2I CCSGG 2 cut(s) 113, 374
AsuHPI GGTGA 7 cut(s) 169, 901, 1394, 2570, 3512, 3540, 3581
AvaI CYCGRG 1 cut(s) 3473
AvaII GGWCC 2 cut(s) 1550, 2294
AxyI CCTNAGG 1 cut(s) 3552
BaeGI GKGCMC 2 cut(s) 1540, 2419
BaeI ACNNNNGTAYC 2 cut(s) 2372, 2405
BanI GGYRCC 1 cut(s) 1535
BanII GRGCYC 4 cut(s) 142, 405, 2077, 3474
BbsI GAAGAC 3 cut(s) 1380, 1392, 2856
Bbv12I GWGCWC 4 cut(s) 372, 1846, 2077, 3474
BbvCI CCTCAGC 1 cut(s) 234
BccI CCATC 9 cut(s) 434, 884, 1252, 1324, 2555, 2590, 2639, 2908, 3047
BceAI ACGGC 1 cut(s) 113
BcgI CGANNNNNNTGC 2 cut(s) 3564, 3598
BciT130I CCWGG 7 cut(s) 554, 845, 1048, 2213, 2394, 3417, 3492
BciVI GTATCC 4 cut(s) 297, 1053, 1454, 2400
BcnI CCSGG 2 cut(s) 113, 374
BcoDI GTCTC 7 cut(s) 330, 455, 685, 780, 1798, 2072, 2834
BcuI ACTAGT 1 cut(s) 464
BfaI CTAG 7 cut(s) 429, 465, 1187, 2375, 2661, 2870, 3014
BfmI CTRYAG 3 cut(s) 1847, 2348, 3103
BfoI RGCGCY 1 cut(s) 428
BfrI CTTAAG 2 cut(s) 2035, 2498
BfuAI ACCTGC 1 cut(s) 252
BfuI GTATCC 4 cut(s) 297, 1053, 1454, 2400
BglII AGATCT 1 cut(s) 2874
Bme1390I CCNGG 9 cut(s) 113, 374, 554, 845, 1048, 2213, 2394, 3417, 3492
Bme18I GGWCC 2 cut(s) 1550, 2294
BmeT110I CYCGRG 1 cut(s) 3473
BmgT120I GGNCC 3 cut(s) 996, 1550, 2294
BmiI GGNNCC 1 cut(s) 1537
BmrFI CCNGG 9 cut(s) 113, 374, 554, 845, 1048, 2213, 2394, 3417, 3492
BmrI ACTGGG 2 cut(s) 59, 2209
BmuI ACTGGG 2 cut(s) 59, 2209
BpiI GAAGAC 3 cut(s) 1380, 1392, 2856
Bpu10I CCTNAGC 1 cut(s) 234
BpuEI CTTGAG 6 cut(s) 126, 197, 1798, 2201, 3181, 3262
BpuMI CCSGG 2 cut(s) 113, 374
BsaAI YACGTR 1 cut(s) 1587
BsaBI GATNNNNATC 1 cut(s) 2751
BsaHI GRCGYC 1 cut(s) 1791
BsaI GGTCTC 1 cut(s) 330
BsaJI CCNNGG 6 cut(s) 112, 129, 1046, 2212, 2479, 3251
BsaWI WCCGGW 2 cut(s) 3466, 3566
BsaXI ACNNNNNCTCC 2 cut(s) 1626, 1656
Bse1I ACTGG 9 cut(s) 60, 65, 311, 364, 1462, 1939, 2043, 2204, 3562
Bse21I CCTNAGG 1 cut(s) 3552
Bse3DI GCAATG 1 cut(s) 1994
Bse8I GATNNNNATC 1 cut(s) 2751
BseAI TCCGGA 1 cut(s) 3466
BseBI CCWGG 7 cut(s) 554, 845, 1048, 2213, 2394, 3417, 3492
BseDI CCNNGG 6 cut(s) 112, 129, 1046, 2212, 2479, 3251
BseJI GATNNNNATC 1 cut(s) 2751
BseMI GCAATG 1 cut(s) 1994
BseMII CTCAG 7 cut(s) 225, 418, 747, 1715, 2083, 2292, 3566
BseNI ACTGG 9 cut(s) 60, 65, 311, 364, 1462, 1939, 2043, 2204, 3562
BseRI GAGGAG 2 cut(s) 2639, 3208
BseSI GKGCMC 2 cut(s) 1540, 2419
BseYI CCCAGC 2 cut(s) 993, 2016
BsgI GTGCAG 5 cut(s) 230, 384, 1717, 2990, 3281
BshFI GGCC 4 cut(s) 998, 2327, 2346, 2447
BshNI GGYRCC 1 cut(s) 1535
BsiHKAI GWGCWC 4 cut(s) 372, 1846, 2077, 3474
BsiHKCI CYCGRG 1 cut(s) 3473
BsiSI CCGG 5 cut(s) 112, 373, 1662, 3467, 3567
BslFI GGGAC 5 cut(s) 869, 2217, 2676, 3272, 3512
BsmAI GTCTC 7 cut(s) 330, 455, 685, 780, 1798, 2072, 2834
BsmBI CGTCTC 1 cut(s) 1798
BsmFI GGGAC 5 cut(s) 869, 2217, 2676, 3272, 3512
BsmI GAATGC 4 cut(s) 223, 749, 1268, 2654
BsnI GGCC 4 cut(s) 998, 2327, 2346, 2447
Bso31I GGTCTC 1 cut(s) 330
BsoBI CYCGRG 1 cut(s) 3473
Bsp1286I GDGCHC 8 cut(s) 142, 372, 405, 1540, 1846, 2077, 2419, 3474
Bsp13I TCCGGA 1 cut(s) 3466
Bsp1407I TGTACA 1 cut(s) 3205
BspACI CCGC 3 cut(s) 916, 1215, 2743
BspANI GGCC 4 cut(s) 998, 2327, 2346, 2447
BspCNI CTCAG 7 cut(s) 226, 417, 748, 1716, 2082, 2291, 3565
BspEI TCCGGA 1 cut(s) 3466
BspHI TCATGA 3 cut(s) 708, 936, 1483
BspLI GGNNCC 1 cut(s) 1537
BspMAI CTGCAG 3 cut(s) 1851, 2352, 3107
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 4 cut(s) 1668, 1728, 2290, 3553
BspQI GCTCTTC 1 cut(s) 3598
BspT107I GGYRCC 1 cut(s) 1535
BspTI CTTAAG 2 cut(s) 2035, 2498
BspTNI GGTCTC 1 cut(s) 330
BsrDI GCAATG 1 cut(s) 1994
BsrGI TGTACA 1 cut(s) 3205
BsrI ACTGG 9 cut(s) 60, 65, 311, 364, 1462, 1939, 2043, 2204, 3562
BssECI CCNNGG 6 cut(s) 112, 129, 1046, 2212, 2479, 3251
BssNI GRCGYC 1 cut(s) 1791
BssT1I CCWWGG 2 cut(s) 2479, 3251
Bst2UI CCWGG 7 cut(s) 554, 845, 1048, 2213, 2394, 3417, 3492
Bst4CI ACNGT 9 cut(s) 531, 1260, 1738, 2118, 2462, 2506, 2577, 2680, 3035
Bst6I CTCTTC 5 cut(s) 493, 1029, 2979, 3228, 3598
BstACI GRCGYC 1 cut(s) 1791
BstAFI CTTAAG 2 cut(s) 2035, 2498
BstAPI GCANNNNNTGC 1 cut(s) 2153
BstAUI TGTACA 1 cut(s) 3205
BstBAI YACGTR 1 cut(s) 1587
BstC8I GCNNGC 8 cut(s) 348, 550, 1195, 1364, 1889, 2031, 2348, 3577
BstDSI CCRYGG 1 cut(s) 129
BstENI CCTNNNNNAGG 2 cut(s) 74, 1896
BstH2I RGCGCY 1 cut(s) 428
BstHHI GCGC 2 cut(s) 427, 1131
BstMAI GTCTC 7 cut(s) 330, 455, 685, 780, 1798, 2072, 2834
BstMWI GCNNNNNNNGC 6 cut(s) 230, 383, 2039, 2144, 2153, 3585
BstNI CCWGG 7 cut(s) 554, 845, 1048, 2213, 2394, 3417, 3492
BstNSI RCATGY 7 cut(s) 128, 350, 573, 1197, 2033, 3150, 3527
BstSCI CCNGG 9 cut(s) 111, 372, 552, 843, 1046, 2211, 2392, 3415, 3490
BstSFI CTRYAG 3 cut(s) 1847, 2348, 3103
BstSLI GKGCMC 2 cut(s) 1540, 2419
BstSNI TACGTA 1 cut(s) 1587
BstV2I GAAGAC 3 cut(s) 1380, 1392, 2856
BstX2I RGATCY 3 cut(s) 1673, 1720, 2874
BstYI RGATCY 3 cut(s) 1673, 1720, 2874
Bsu36I CCTNAGG 1 cut(s) 3552
BsuI GTATCC 4 cut(s) 297, 1053, 1454, 2400
BsuRI GGCC 4 cut(s) 998, 2327, 2346, 2447
BtgI CCRYGG 1 cut(s) 129
BtsI GCAGTG 4 cut(s) 372, 1157, 3293, 3298
BtsIMutI CAGTG 8 cut(s) 372, 412, 1157, 1265, 1734, 2611, 3293, 3298
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 8 cut(s) 348, 550, 1195, 1364, 1889, 2031, 2348, 3577
CciI TCATGA 3 cut(s) 708, 936, 1483
CfoI GCGC 2 cut(s) 427, 1131
Cfr13I GGNCC 3 cut(s) 996, 1550, 2294
CsiI ACCWGGT 1 cut(s) 3415
Csp6I GTAC 2 cut(s) 2544, 3206
CspCI CAANNNNNGTGG 2 cut(s) 2967, 3002
CviQI GTAC 2 cut(s) 2544, 3206
DraI TTTAAA 4 cut(s) 421, 1135, 1857, 2088
EaeI YGGCCR 1 cut(s) 2325
Eam1104I CTCTTC 5 cut(s) 493, 1029, 2979, 3228, 3598
EarI CTCTTC 5 cut(s) 493, 1029, 2979, 3228, 3598
Ecl136II GAGCTC 2 cut(s) 2075, 3472
Eco105I TACGTA 1 cut(s) 1587
Eco130I CCWWGG 2 cut(s) 2479, 3251
Eco147I AGGCCT 1 cut(s) 2346
Eco24I GRGCYC 4 cut(s) 142, 405, 2077, 3474
Eco31I GGTCTC 1 cut(s) 330
Eco32I GATATC 1 cut(s) 809
Eco47I GGWCC 2 cut(s) 1550, 2294
Eco53kI GAGCTC 2 cut(s) 2075, 3472
Eco57I CTGAAG 5 cut(s) 564, 755, 1050, 1973, 2892
Eco81I CCTNAGG 1 cut(s) 3552
Eco88I CYCGRG 1 cut(s) 3473
EcoICRI GAGCTC 2 cut(s) 2075, 3472
EcoNI CCTNNNNNAGG 2 cut(s) 74, 1896
EcoRI GAATTC 1 cut(s) 1298
EcoRII CCWGG 7 cut(s) 552, 843, 1046, 2211, 2392, 3415, 3490
EcoRV GATATC 1 cut(s) 809
EcoT14I CCWWGG 2 cut(s) 2479, 3251
EcoT22I ATGCAT 5 cut(s) 348, 1195, 2140, 2540, 2656
EcoT38I GRGCYC 4 cut(s) 142, 405, 2077, 3474
ErhI CCWWGG 2 cut(s) 2479, 3251
Esp3I CGTCTC 1 cut(s) 1798
FalI AAGNNNNNCTT 4 cut(s) 135, 167, 2322, 2354
FaqI GGGAC 5 cut(s) 869, 2217, 2676, 3272, 3512
FauI CCCGC 3 cut(s) 923, 1222, 2736
FblI GTMKAC 2 cut(s) 118, 3487
FriOI GRGCYC 4 cut(s) 142, 405, 2077, 3474
FspBI CTAG 7 cut(s) 429, 465, 1187, 2375, 2661, 2870, 3014
GlaI GCGC 2 cut(s) 426, 1130
GsaI CCCAGC 2 cut(s) 997, 2020
HaeII RGCGCY 1 cut(s) 428
HaeIII GGCC 4 cut(s) 998, 2327, 2346, 2447
HapII CCGG 5 cut(s) 112, 373, 1662, 3467, 3567
HhaI GCGC 2 cut(s) 427, 1131
Hin1I GRCGYC 1 cut(s) 1791
Hin6I GCGC 2 cut(s) 425, 1129
HinP1I GCGC 2 cut(s) 425, 1129
HindIII AAGCTT 2 cut(s) 546, 2891
HpaII CCGG 5 cut(s) 112, 373, 1662, 3467, 3567
HphI GGTGA 7 cut(s) 169, 901, 1394, 2570, 3512, 3540, 3581
Hpy166II GTNNAC 8 cut(s) 119, 1705, 1741, 2465, 2769, 2960, 3206, 3488
Hpy8I GTNNAC 8 cut(s) 119, 1705, 1741, 2465, 2769, 2960, 3206, 3488
HpyAV CCTTC 9 cut(s) 551, 964, 1331, 2164, 2216, 2336, 2831, 2916, 3089
HpyCH4III ACNGT 9 cut(s) 531, 1260, 1738, 2118, 2462, 2506, 2577, 2680, 3035
HpyCH4IV ACGT 2 cut(s) 1586, 1791
HpyF10VI GCNNNNNNNGC 6 cut(s) 230, 383, 2039, 2144, 2153, 3585
HpySE526I ACGT 2 cut(s) 1586, 1791
Hsp92I GRCGYC 1 cut(s) 1791
HspAI GCGC 2 cut(s) 425, 1129
Kpn2I TCCGGA 1 cut(s) 3466
LguI GCTCTTC 1 cut(s) 3598
LmnI GCTCC 6 cut(s) 279, 375, 1884, 2737, 3136, 3469
MabI ACCWGGT 1 cut(s) 3415
MaeI CTAG 7 cut(s) 429, 465, 1187, 2375, 2661, 2870, 3014
MaeII ACGT 2 cut(s) 1586, 1791
MaeIII GTNAC 6 cut(s) 907, 1815, 1977, 2721, 3029, 3276
MfeI CAATTG 2 cut(s) 620, 1059
MflI RGATCY 3 cut(s) 1673, 1720, 2874
MhlI GDGCHC 8 cut(s) 142, 372, 405, 1540, 1846, 2077, 2419, 3474
MlyI GAGTC 4 cut(s) 491, 734, 938, 2074
MmeI TCCRAC 2 cut(s) 2780, 3466
Mph1103I ATGCAT 5 cut(s) 348, 1195, 2140, 2540, 2656
MroI TCCGGA 1 cut(s) 3466
MroXI GAANNNNTTC 3 cut(s) 2334, 2469, 2811
MslI CAYNNNNRTG 1 cut(s) 657
MspA1I CMGCKG 2 cut(s) 1731, 2965
MspCI CTTAAG 2 cut(s) 2035, 2498
MspI CCGG 5 cut(s) 112, 373, 1662, 3467, 3567
MspR9I CCNGG 9 cut(s) 113, 374, 554, 845, 1048, 2213, 2394, 3417, 3492
MunI CAATTG 2 cut(s) 620, 1059
Mva1269I GAATGC 4 cut(s) 223, 749, 1268, 2654
MvaI CCWGG 7 cut(s) 554, 845, 1048, 2213, 2394, 3417, 3492
MwoI GCNNNNNNNGC 6 cut(s) 230, 383, 2039, 2144, 2153, 3585
NciI CCSGG 2 cut(s) 113, 374
NlaIV GGNNCC 1 cut(s) 1537
NmuCI GTSAC 3 cut(s) 907, 2721, 3029
NsiI ATGCAT 5 cut(s) 348, 1195, 2140, 2540, 2656
NspI RCATGY 7 cut(s) 128, 350, 573, 1197, 2033, 3150, 3527
PaeI GCATGC 3 cut(s) 350, 1197, 2033
PaeR7I CTCGAG 1 cut(s) 3473
PagI TCATGA 3 cut(s) 708, 936, 1483
PceI AGGCCT 1 cut(s) 2346
PciI ACATGT 2 cut(s) 569, 3523
PciSI GCTCTTC 1 cut(s) 3598
PctI GAATGC 4 cut(s) 223, 749, 1268, 2654
PdmI GAANNNNTTC 3 cut(s) 2334, 2469, 2811
PfeI GAWTC 7 cut(s) 319, 1658, 1754, 2234, 2309, 2397, 3355
PflMI CCANNNNNTGG 5 cut(s) 1547, 1948, 3056, 3185, 3497
PfoI TCCNGGA 1 cut(s) 2392
PleI GAGTC 4 cut(s) 490, 733, 938, 2073
PpsI GAGTC 4 cut(s) 490, 733, 938, 2073
Ppu21I YACGTR 1 cut(s) 1587
PscI ACATGT 2 cut(s) 569, 3523
PshBI ATTAAT 1 cut(s) 1343
Psp124BI GAGCTC 2 cut(s) 2077, 3474
Psp6I CCWGG 7 cut(s) 552, 843, 1046, 2211, 2392, 3415, 3490
PspFI CCCAGC 2 cut(s) 993, 2016
PspGI CCWGG 7 cut(s) 552, 843, 1046, 2211, 2392, 3415, 3490
PspN4I GGNNCC 1 cut(s) 1537
PspPI GGNCC 3 cut(s) 996, 1550, 2294
PspXI VCTCGAGB 1 cut(s) 3473
PstI CTGCAG 3 cut(s) 1851, 2352, 3107
PsuI RGATCY 3 cut(s) 1673, 1720, 2874
PvuII CAGCTG 2 cut(s) 1731, 2965
RsaI GTAC 2 cut(s) 2545, 3207
RsaNI GTAC 2 cut(s) 2544, 3206
RseI CAYNNNNRTG 1 cut(s) 657
SacI GAGCTC 2 cut(s) 2077, 3474
SapI GCTCTTC 1 cut(s) 3598
Sau96I GGNCC 3 cut(s) 996, 1550, 2294
SchI GAGTC 4 cut(s) 491, 734, 938, 2074
ScrFI CCNGG 9 cut(s) 113, 374, 554, 845, 1048, 2213, 2394, 3417, 3492
SduI GDGCHC 8 cut(s) 142, 372, 405, 1540, 1846, 2077, 2419, 3474
SexAI ACCWGGT 1 cut(s) 3415
SfcI CTRYAG 3 cut(s) 1847, 2348, 3103
Sfr274I CTCGAG 1 cut(s) 3473
SinI GGWCC 2 cut(s) 1550, 2294
SlaI CTCGAG 1 cut(s) 3473
SmiI ATTTAAAT 1 cut(s) 2088
SmiMI CAYNNNNRTG 1 cut(s) 657
SmlI CTYRAG 9 cut(s) 141, 212, 1777, 2035, 2180, 2498, 3160, 3241, 3473
SmoI CTYRAG 9 cut(s) 141, 212, 1777, 2035, 2180, 2498, 3160, 3241, 3473
SnaBI TACGTA 1 cut(s) 1587
SpeI ACTAGT 1 cut(s) 464
SphI GCATGC 3 cut(s) 350, 1197, 2033
SseBI AGGCCT 1 cut(s) 2346
SsiI CCGC 3 cut(s) 916, 1215, 2743
SspI AATATT 3 cut(s) 537, 582, 2110
SspMI CTAG 7 cut(s) 429, 465, 1187, 2375, 2661, 2870, 3014
SstI GAGCTC 2 cut(s) 2077, 3474
StuI AGGCCT 1 cut(s) 2346
StyD4I CCNGG 9 cut(s) 111, 372, 552, 843, 1046, 2211, 2392, 3415, 3490
StyI CCWWGG 2 cut(s) 2479, 3251
SwaI ATTTAAAT 1 cut(s) 2088
TaaI ACNGT 9 cut(s) 531, 1260, 1738, 2118, 2462, 2506, 2577, 2680, 3035
TaiI ACGT 2 cut(s) 1589, 1794
TaqI TCGA 5 cut(s) 480, 1694, 2518, 3370, 3474
TaqII GACCGA 1 cut(s) 1925
TatI WGTACW 1 cut(s) 3205
TfiI GAWTC 7 cut(s) 319, 1658, 1754, 2234, 2309, 2397, 3355
TscAI CASTG 8 cut(s) 372, 412, 1157, 1265, 1741, 2611, 3300, 3305
TseFI GTSAC 3 cut(s) 907, 2721, 3029
Tsp45I GTSAC 3 cut(s) 907, 2721, 3029
TspRI CASTG 8 cut(s) 372, 412, 1157, 1265, 1741, 2611, 3300, 3305
Van91I CCANNNNNTGG 5 cut(s) 1547, 1948, 3056, 3185, 3497
Vha464I CTTAAG 2 cut(s) 2035, 2498
VpaK11BI GGWCC 2 cut(s) 1550, 2294
VspI ATTAAT 1 cut(s) 1343
XagI CCTNNNNNAGG 2 cut(s) 74, 1896
XapI RAATTY 9 cut(s) 787, 952, 1298, 1560, 2334, 2370, 2402, 2776, 2811
XbaI TCTAGA 1 cut(s) 2869
XceI RCATGY 7 cut(s) 128, 350, 573, 1197, 2033, 3150, 3527
XhoI CTCGAG 1 cut(s) 3473
XmiI GTMKAC 2 cut(s) 118, 3487
XmnI GAANNNNTTC 3 cut(s) 2334, 2469, 2811
XspI CTAG 7 cut(s) 429, 465, 1187, 2375, 2661, 2870, 3014
ZraI GACGTC 1 cut(s) 1792
Zsp2I ATGCAT 5 cut(s) 348, 1195, 2140, 2540, 2656
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.