Rh6CG167500

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000400
Physical Location & Seq
Forward (+)
22656125 .. 22659649
3525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG167500.1

Sequence Viewer

Length: 2103 bp
ATGGCAGACCTGGTCTTATCCCCAGCTTTGCAAGTGATCTTTGACAGAATAGCATCCCCTGTCTTAGAAAAGATTGCTGACTTGTGGGATCTCAAGGACAACGTCCAGAGGCTAAGAGAGACCTTGATGCTGATTCAACCTACTCTCGAGGATGCTGAAGAGCAACAATTCTCCAACAAAGCTGTCAAAATTTGGCTGTCAAAGCTTGAGAAGGCAGCTTATGATGCTGAGGACGGACTGCAATACATGACTGCTAGAGACCTGAACAGTTGTGATGTTCATAGATTGCCAGAATCATTGTGCGACTTAATATGTTTGAGATATCTTGACCTGTCTTACACACCTATATTCACGCTTCCTTATGACAGGGCATCGGAACTCGTGTCTCTGCAGACTTTAAACCTACTTGGTTGCCCTAATTTGAGGCGTTTGCCTGACTTGGGAGGCATGACAGGCCTAAGACATCTCGATATAACTGCATGCGCAAGTTTGACTCAGATGCCTAAGGGTATTGGAGAACTACATCAACTTGAGACATTGCCATTGTATGTTATTAGCGACAACAGCGAGGCCCTTGAGCTGGGTGGTTTGAATCTTTATGGCACGTTGAATCTTACACACTTGGAAAATGTAACCAAGGTAGTAGAAGCGAAATCAGCAGGATTGAGGATGAAGGAGAATATCGAGTCATTGGGACTATATTGGAGAGGCGAAGATGTGGATGAATCAATCATGATAAAACTACCTAAAGCCCAACAAGAAGCAGTCAACTCAGGATCTCAGAGAGTGCCACAGAATTCTGAACCCGTGGAAGAAATTCTTGAAGCCTTGAAACCGCACGACAATCTGAAGATGCTAGTTATAAATGGGTATCCAGGAACTAGACTTCCTGATTGGACTCTCCCGAATCTAACTGCAGTTTATTTGAAGGAATGTAGAAATTGTCAGAATCTTCCAGCTCTTGGGAATCTCCTGATGCTTAAAACTCTTTCTTTGCAAGGAATGGATTGTCTGAAACACGTTGGTGCAGATTTCTACGGTGATGATACCAGCATACCATTCTTGTCACTTGAAGAGTTATCGCTCTGTGATTTATCCAACTTGGAAGAGTGGTCGAGTGCAAATAACATGACTTCATTCCCGAGATTGAGGAAGTTAACCGTTAACAGATGTCCCAAGTTGGCACATATACCATTATCTGAATCTCTTCGACATTTGGAGTTGCGGGGTTGTAAACTACGTTTGATGTCCATAGCAAATTTAAGTCTACTTTCTGTGCTCGTCTTAGAAAATATTCCTGACCTATCCTCTCTCCCAGAAGGACTTATTGCATCAGCTCATCTGTCTTGTCTGAAGATTTTGTCATGCCCCAAGCTTCGTTCACTGCCTTTGGAGATGGGAAATTGCCTTACTAGTCTGAAATCATTGACCATTGGTTGGTGTCAAGATCTGTCGTCTCTGCCTGACAGTTTGCAAAACCTCAAAGCCCTGGAATCACTGGAGATTAGTGACTGTCACTACATAATCTCCATGCCGGATGGTGCTATTGGAGGTTTGAGTTCCCTTCGAACTTTGTCCATTGAGAACTGCACTAGTCTGAATTCTTTGTCCTCAAGTTTGGAACATTTGACATTCCTTGAACACTTGACCATTATGTATTGTCCAAGTCTTGGTTCTTTTCCAGAGGGTGTGCAACACCTCTCTGCCCTTCGAAGTTTGACTATCCTGAGCTGTCCTTGGTTTGACTCTCTGCCAAATGGCTTACAAAATGTCAGGACACTACACTGTTTGGAAATTAGTAGCTGCACAAATCTAAGAGCTTTGCCAGAATGGTTTGAGAATCTTAACTCTCTTAGATCCTTGACCATATCTGCTTGTCCTAATTTAGAAGAATTGCCGGCAGGTCTAAAGCATCTCACTAAACTCCAGTACCTCTCTATCCAAGAATGTCCTGAGCTTGAGCAAAGATGCAGACAAGGAAGTGGAGAGGATTGGTTCAAAATAGCTCATGTTCCACATAAATACATTGGTTCTCCTCAGGTCAGTCAATCCAGCGAAGCAAGCACCTCAGGCGGATCGTCTTCTCAAACATCTGCTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

700

Amino Acids

77.54

Weight (kDa)

5.17

Isoelectric Point (pI)

57.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 81 1.9e-17 Rx N-terminal domain
LRR_14 PF23598 88 - 387 2.5e-16 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 193 - 335 1.2e-28 R13L1/DRL21 LRRs
LRR_14 PF23598 375 - 503 1.5e-06 Leucine-rich repeat region
LRR_14 PF23598 521 - 649 2.9e-12 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 607 - 650 3.9e-06 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 863
Acc16I TGCGCA 1 cut(s) 484
Acc36I ACCTGC 1 cut(s) 1892
AccB7I CCANNNNNTGG 3 cut(s) 962, 1437, 1670
AccI GTMKAC 1 cut(s) 1267
AciI CCGC 3 cut(s) 836, 1225, 2073
AclWI GGATC 4 cut(s) 96, 784, 1851, 2083
AcsI RAATTY 5 cut(s) 189, 796, 816, 1258, 1600
AcuI CTGAAG 3 cut(s) 177, 869, 1373
AfaI GTAC 1 cut(s) 1931
AfiI CCNNNNNNNGG 5 cut(s) 440, 580, 962, 1437, 1670
AflIII ACRYGT 1 cut(s) 1018
AgsI TTSAA 9 cut(s) 137, 592, 610, 824, 832, 928, 1073, 1640, 1999
AhlI ACTAGT 2 cut(s) 1412, 1592
AjnI CCWGG 3 cut(s) 9, 874, 1488
AjuI GAANNNNNNNTTGG 2 cut(s) 1657, 1689
AleI CACNNNNGTG 1 cut(s) 1023
AloI GAACNNNNNNTCC 2 cut(s) 871, 903
Alw21I GWGCWC 1 cut(s) 1281
Alw26I GTCTC 5 cut(s) 113, 252, 390, 527, 1461
AlwI GGATC 4 cut(s) 96, 784, 1851, 2083
Ama87I CYCGRG 2 cut(s) 146, 1141
AoxI GGCC 2 cut(s) 454, 570
ApeKI GCWGC 2 cut(s) 215, 1803
ApoI RAATTY 5 cut(s) 189, 796, 816, 1258, 1600
Asp700I GAANNNNTTC 3 cut(s) 816, 1206, 1293
AspLEI GCGC 1 cut(s) 485
AspS9I GGNCC 1 cut(s) 571
AsuHPI GGTGA 1 cut(s) 1052
AsuII TTCGAA 2 cut(s) 1567, 1711
AvaI CYCGRG 2 cut(s) 146, 1141
AxyI CCTNAGG 3 cut(s) 504, 2037, 2068
BaeI ACNNNNGTAYC 2 cut(s) 1913, 1946
BauI CACGAG 1 cut(s) 380
BbsI GAAGAC 1 cut(s) 2073
Bbv12I GWGCWC 1 cut(s) 1281
BbvCI CCTCAGC 1 cut(s) 228
BbvI GCAGC 2 cut(s) 227, 1790
BccI CCATC 2 cut(s) 1390, 1532
BcgI CGANNNNNNTGC 2 cut(s) 458, 492
BciT130I CCWGG 3 cut(s) 11, 876, 1490
BciVI GTATCC 1 cut(s) 882
BcoDI GTCTC 5 cut(s) 113, 252, 390, 527, 1461
BcuI ACTAGT 2 cut(s) 1412, 1592
BfaI CTAG 5 cut(s) 255, 857, 882, 1413, 1593
BfmI CTRYAG 2 cut(s) 389, 915
BfuAI ACCTGC 1 cut(s) 1892
BfuI GTATCC 1 cut(s) 882
BglII AGATCT 1 cut(s) 1447
BisI GCNGC 2 cut(s) 216, 1804
BlsI GCNGC 2 cut(s) 217, 1805
Bme1390I CCNGG 3 cut(s) 11, 876, 1490
BmeT110I CYCGRG 2 cut(s) 146, 1141
BmgT120I GGNCC 1 cut(s) 571
BmrFI CCNGG 3 cut(s) 11, 876, 1490
BpiI GAAGAC 1 cut(s) 2073
BpmI CTGGAG 2 cut(s) 1520, 1910
Bpu10I CCTNAGC 3 cut(s) 228, 1727, 1953
Bpu14I TTCGAA 2 cut(s) 1567, 1711
BpuEI CTTGAG 6 cut(s) 77, 227, 551, 596, 1597, 1979
BsaI GGTCTC 2 cut(s) 113, 252
BsaJI CCNNGG 4 cut(s) 636, 807, 1488, 1736
BsaXI ACNNNNNCTCC 2 cut(s) 1511, 1541
Bsc4I CCNNNNNNNGG 5 cut(s) 440, 580, 962, 1437, 1670
Bse118I RCCGGY 1 cut(s) 1897
Bse1I ACTGG 2 cut(s) 1503, 1927
Bse21I CCTNAGG 3 cut(s) 504, 2037, 2068
Bse3DI GCAATG 1 cut(s) 536
BseBI CCWGG 3 cut(s) 11, 876, 1490
BseDI CCNNGG 4 cut(s) 636, 807, 1488, 1736
BseGI GGATG 5 cut(s) 53, 157, 675, 727, 1543
BseLI CCNNNNNNNGG 5 cut(s) 440, 580, 962, 1437, 1670
BseMI GCAATG 1 cut(s) 536
BseMII CTCAG 8 cut(s) 219, 509, 786, 794, 1718, 1944, 2051, 2082
BseNI ACTGG 2 cut(s) 1503, 1927
BseRI GAGGAG 1 cut(s) 2025
BseXI GCAGC 2 cut(s) 227, 1790
BseYI CCCAGC 2 cut(s) 22, 580
BsgI GTGCAG 3 cut(s) 1047, 1573, 1789
BshFI GGCC 2 cut(s) 456, 572
BsiHKAI GWGCWC 1 cut(s) 1281
BsiHKCI CYCGRG 2 cut(s) 146, 1141
BsiSI CCGG 2 cut(s) 1535, 1898
BslFI GGGAC 2 cut(s) 708, 1158
BslI CCNNNNNNNGG 5 cut(s) 440, 580, 962, 1437, 1670
BsmAI GTCTC 5 cut(s) 113, 252, 390, 527, 1461
BsmBI CGTCTC 1 cut(s) 1461
BsmFI GGGAC 2 cut(s) 708, 1158
BsnI GGCC 2 cut(s) 456, 572
Bso31I GGTCTC 2 cut(s) 113, 252
BsoBI CYCGRG 2 cut(s) 146, 1141
Bsp119I TTCGAA 2 cut(s) 1567, 1711
Bsp1286I GDGCHC 1 cut(s) 1281
Bsp143I GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
BspACI CCGC 3 cut(s) 836, 1225, 2073
BspANI GGCC 2 cut(s) 456, 572
BspCNI CTCAG 8 cut(s) 220, 508, 785, 793, 1719, 1945, 2050, 2081
BspHI TCATGA 1 cut(s) 732
BspMAI CTGCAG 2 cut(s) 393, 919
BspMI ACCTGC 1 cut(s) 1892
BspPI GGATC 4 cut(s) 96, 784, 1851, 2083
BspQI GCTCTTC 1 cut(s) 153
BspT104I TTCGAA 2 cut(s) 1567, 1711
BspTNI GGTCTC 2 cut(s) 113, 252
BsrDI GCAATG 1 cut(s) 536
BsrFI RCCGGY 1 cut(s) 1897
BsrI ACTGG 2 cut(s) 1503, 1927
BssAI RCCGGY 1 cut(s) 1897
BssECI CCNNGG 4 cut(s) 636, 807, 1488, 1736
BssMI GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
BssSI CACGAG 1 cut(s) 380
BssT1I CCWWGG 2 cut(s) 636, 1736
Bst2BI CACGAG 1 cut(s) 380
Bst2UI CCWGG 3 cut(s) 11, 876, 1490
Bst4CI ACNGT 6 cut(s) 269, 1040, 1162, 1469, 1514, 1787
Bst6I CTCTTC 4 cut(s) 153, 1068, 1101, 1212
BstBI TTCGAA 2 cut(s) 1567, 1711
BstC8I GCNNGC 3 cut(s) 481, 1899, 2062
BstDSI CCRYGG 1 cut(s) 807
BstF5I GGATG 5 cut(s) 53, 157, 675, 727, 1543
BstHHI GCGC 1 cut(s) 485
BstKTI GATC 6 cut(s) 39, 91, 779, 1450, 1859, 2078
BstMAI GTCTC 5 cut(s) 113, 252, 390, 527, 1461
BstMBI GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
BstMWI GCNNNNNNNGC 7 cut(s) 202, 224, 453, 564, 656, 2061, 2070
BstNI CCWGG 3 cut(s) 11, 876, 1490
BstNSI RCATGY 1 cut(s) 483
BstSCI CCNGG 3 cut(s) 9, 874, 1488
BstSFI CTRYAG 2 cut(s) 389, 915
BstV1I GCAGC 2 cut(s) 227, 1790
BstV2I GAAGAC 1 cut(s) 2073
BstX2I RGATCY 4 cut(s) 88, 776, 1447, 1856
BstYI RGATCY 4 cut(s) 88, 776, 1447, 1856
Bsu36I CCTNAGG 3 cut(s) 504, 2037, 2068
BsuI GTATCC 1 cut(s) 882
BsuRI GGCC 2 cut(s) 456, 572
BtgI CCRYGG 1 cut(s) 807
BtsCI GGATG 5 cut(s) 53, 157, 675, 727, 1543
BtsI GCAGTG 1 cut(s) 1382
BtsIMutI CAGTG 3 cut(s) 1382, 1496, 1783
BveI ACCTGC 1 cut(s) 1892
Cac8I GCNNGC 3 cut(s) 481, 1899, 2062
CciI TCATGA 1 cut(s) 732
CfoI GCGC 1 cut(s) 485
Cfr10I RCCGGY 1 cut(s) 1897
Cfr13I GGNCC 1 cut(s) 571
CsiI ACCWGGT 1 cut(s) 9
Csp6I GTAC 1 cut(s) 1930
CviAII CATG 8 cut(s) 247, 448, 480, 733, 1129, 1365, 1531, 2009
CviQI GTAC 1 cut(s) 1930
DpnI GATC 6 cut(s) 38, 90, 778, 1449, 1858, 2077
DpnII GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
DraI TTTAAA 1 cut(s) 399
Eam1104I CTCTTC 4 cut(s) 153, 1068, 1101, 1212
EarI CTCTTC 4 cut(s) 153, 1068, 1101, 1212
EciI GGCGGA 1 cut(s) 2088
Eco130I CCWWGG 2 cut(s) 636, 1736
Eco147I AGGCCT 1 cut(s) 456
Eco31I GGTCTC 2 cut(s) 113, 252
Eco32I GATATC 1 cut(s) 323
Eco57I CTGAAG 3 cut(s) 177, 869, 1373
Eco81I CCTNAGG 3 cut(s) 504, 2037, 2068
Eco88I CYCGRG 2 cut(s) 146, 1141
EcoO109I RGGNCCY 1 cut(s) 571
EcoRI GAATTC 2 cut(s) 796, 1600
EcoRII CCWGG 3 cut(s) 9, 874, 1488
EcoRV GATATC 1 cut(s) 323
EcoT14I CCWWGG 2 cut(s) 636, 1736
ErhI CCWWGG 2 cut(s) 636, 1736
Esp3I CGTCTC 1 cut(s) 1461
FaeI CATG 8 cut(s) 250, 451, 483, 736, 1132, 1368, 1534, 2012
FalI AAGNNNNNCTT 2 cut(s) 804, 836
FaqI GGGAC 2 cut(s) 708, 1158
FatI CATG 8 cut(s) 246, 447, 479, 732, 1128, 1364, 1530, 2008
FauI CCCGC 1 cut(s) 1218
FblI GTMKAC 1 cut(s) 1267
Fnu4HI GCNGC 2 cut(s) 216, 1804
FokI GGATG 5 cut(s) 40, 164, 682, 734, 1550
Fsp4HI GCNGC 2 cut(s) 216, 1804
FspBI CTAG 5 cut(s) 255, 857, 882, 1413, 1593
FspI TGCGCA 1 cut(s) 484
GlaI GCGC 1 cut(s) 484
GluI GCNGC 2 cut(s) 216, 1804
GsaI CCCAGC 2 cut(s) 26, 584
GsuI CTGGAG 2 cut(s) 1520, 1910
HaeIII GGCC 2 cut(s) 456, 572
HapII CCGG 2 cut(s) 1535, 1898
HhaI GCGC 1 cut(s) 485
Hin1II CATG 8 cut(s) 250, 451, 483, 736, 1132, 1368, 1534, 2012
Hin6I GCGC 1 cut(s) 483
HinP1I GCGC 1 cut(s) 483
HincII GTYRAC 3 cut(s) 769, 1158, 1165
HindII GTYRAC 3 cut(s) 769, 1158, 1165
HindIII AAGCTT 2 cut(s) 203, 1373
HpaI GTTAAC 2 cut(s) 1158, 1165
HpaII CCGG 2 cut(s) 1535, 1898
HphI GGTGA 1 cut(s) 1052
Hpy166II GTNNAC 6 cut(s) 769, 1158, 1165, 1235, 1268, 1382
Hpy8I GTNNAC 6 cut(s) 769, 1158, 1165, 1235, 1268, 1382
HpyAV CCTTC 6 cut(s) 205, 667, 922, 1313, 1574, 1718
HpyCH4III ACNGT 6 cut(s) 269, 1040, 1162, 1469, 1514, 1787
HpyCH4IV ACGT 4 cut(s) 102, 605, 1020, 1240
HpyF10VI GCNNNNNNNGC 7 cut(s) 202, 224, 453, 564, 656, 2061, 2070
HpySE526I ACGT 4 cut(s) 102, 605, 1020, 1240
Hsp92II CATG 8 cut(s) 250, 451, 483, 736, 1132, 1368, 1534, 2012
HspAI GCGC 1 cut(s) 483
KroI GCCGGC 1 cut(s) 1897
KroNI GCCGGC 1 cut(s) 1899
KspAI GTTAAC 2 cut(s) 1158, 1165
Kzo9I GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
LguI GCTCTTC 1 cut(s) 153
Lsp1109I GCAGC 2 cut(s) 227, 1790
MabI ACCWGGT 1 cut(s) 9
MaeI CTAG 5 cut(s) 255, 857, 882, 1413, 1593
MaeII ACGT 4 cut(s) 102, 605, 1020, 1240
MaeIII GTNAC 4 cut(s) 631, 1065, 1508, 1514
MalI GATC 6 cut(s) 38, 90, 778, 1449, 1858, 2077
MboI GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
MflI RGATCY 4 cut(s) 88, 776, 1447, 1856
MhlI GDGCHC 1 cut(s) 1281
MlyI GAGTC 4 cut(s) 487, 695, 892, 1739
MmeI TCCRAC 2 cut(s) 198, 1122
MroNI GCCGGC 1 cut(s) 1897
MroXI GAANNNNTTC 3 cut(s) 816, 1206, 1293
MseI TTAA 7 cut(s) 308, 398, 981, 1157, 1164, 1262, 1845
MslI CAYNNNNRTG 1 cut(s) 1023
MspI CCGG 2 cut(s) 1535, 1898
MspR9I CCNGG 3 cut(s) 11, 876, 1490
MvaI CCWGG 3 cut(s) 11, 876, 1490
MwoI GCNNNNNNNGC 7 cut(s) 202, 224, 453, 564, 656, 2061, 2070
NaeI GCCGGC 1 cut(s) 1899
NdeII GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
NgoMIV GCCGGC 1 cut(s) 1897
NlaIII CATG 8 cut(s) 250, 451, 483, 736, 1132, 1368, 1534, 2012
NmuCI GTSAC 3 cut(s) 1065, 1508, 1514
NsbI TGCGCA 1 cut(s) 484
NspI RCATGY 1 cut(s) 483
NspV TTCGAA 2 cut(s) 1567, 1711
OliI CACNNNNGTG 1 cut(s) 1023
PaeI GCATGC 1 cut(s) 483
PaeR7I CTCGAG 1 cut(s) 146
PagI TCATGA 1 cut(s) 732
PceI AGGCCT 1 cut(s) 456
PciSI GCTCTTC 1 cut(s) 153
PdiI GCCGGC 1 cut(s) 1899
PdmI GAANNNNTTC 3 cut(s) 816, 1206, 1293
PflFI GACNNNGTC 2 cut(s) 11, 101
PflMI CCANNNNNTGG 3 cut(s) 962, 1437, 1670
PfoI TCCNGGA 1 cut(s) 874
PkrI GCNGC 2 cut(s) 217, 1805
PleI GAGTC 4 cut(s) 487, 694, 892, 1739
PpsI GAGTC 4 cut(s) 487, 694, 892, 1739
PsiI TTATAA 1 cut(s) 863
Psp6I CCWGG 3 cut(s) 9, 874, 1488
PspFI CCCAGC 2 cut(s) 22, 580
PspGI CCWGG 3 cut(s) 9, 874, 1488
PspPI GGNCC 1 cut(s) 571
PstI CTGCAG 2 cut(s) 393, 919
PsuI RGATCY 4 cut(s) 88, 776, 1447, 1856
PsyI GACNNNGTC 2 cut(s) 11, 101
RsaI GTAC 1 cut(s) 1931
RsaNI GTAC 1 cut(s) 1930
RseI CAYNNNNRTG 1 cut(s) 1023
SapI GCTCTTC 1 cut(s) 153
SaqAI TTAA 7 cut(s) 308, 398, 981, 1157, 1164, 1262, 1845
SatI GCNGC 2 cut(s) 216, 1804
Sau3AI GATC 6 cut(s) 36, 88, 776, 1447, 1856, 2075
Sau96I GGNCC 1 cut(s) 571
SchI GAGTC 4 cut(s) 487, 695, 892, 1739
ScrFI CCNGG 3 cut(s) 11, 876, 1490
SduI GDGCHC 1 cut(s) 1281
SexAI ACCWGGT 1 cut(s) 9
SfcI CTRYAG 2 cut(s) 389, 915
Sfr274I CTCGAG 1 cut(s) 146
SfuI TTCGAA 2 cut(s) 1567, 1711
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 1023
SmlI CTYRAG 7 cut(s) 92, 146, 206, 530, 575, 1612, 1958
SmoI CTYRAG 7 cut(s) 92, 146, 206, 530, 575, 1612, 1958
SpeI ACTAGT 2 cut(s) 1412, 1592
SphI GCATGC 1 cut(s) 483
SseBI AGGCCT 1 cut(s) 456
SsiI CCGC 3 cut(s) 836, 1225, 2073
SspI AATATT 1 cut(s) 1294
SspMI CTAG 5 cut(s) 255, 857, 882, 1413, 1593
StuI AGGCCT 1 cut(s) 456
StyD4I CCNGG 3 cut(s) 9, 874, 1488
StyI CCWWGG 2 cut(s) 636, 1736
TaaI ACNGT 6 cut(s) 269, 1040, 1162, 1469, 1514, 1787
TaiI ACGT 4 cut(s) 105, 608, 1023, 1243
TaqI TCGA 7 cut(s) 147, 468, 684, 1115, 1210, 1567, 1711
Tru1I TTAA 7 cut(s) 308, 398, 981, 1157, 1164, 1262, 1845
Tru9I TTAA 7 cut(s) 308, 398, 981, 1157, 1164, 1262, 1845
TscAI CASTG 3 cut(s) 1389, 1503, 1790
TseFI GTSAC 3 cut(s) 1065, 1508, 1514
TseI GCWGC 2 cut(s) 215, 1803
Tsp45I GTSAC 3 cut(s) 1065, 1508, 1514
TspDTI ATGAA 4 cut(s) 269, 686, 738, 1125
TspGWI ACGGA 1 cut(s) 249
TspRI CASTG 3 cut(s) 1389, 1503, 1790
Tth111I GACNNNGTC 2 cut(s) 11, 101
Van91I CCANNNNNTGG 3 cut(s) 962, 1437, 1670
XapI RAATTY 5 cut(s) 189, 796, 816, 1258, 1600
XceI RCATGY 1 cut(s) 483
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 1267
XmnI GAANNNNTTC 3 cut(s) 816, 1206, 1293
XspI CTAG 5 cut(s) 255, 857, 882, 1413, 1593
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.