Rmu_sc0015938.1_g000001

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015938.1
OG0000400
Physical Location & Seq
Reverse (-)
1016 .. 4573
3558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015938.1_g000001.1.cds

Sequence Viewer

Length: 3558 bp
atggcagacgtagttttatcaccagctttgcaagtgatctttgacagagtagcatccccagtcctacaaaagcttgcggatatctgggacatgaaggacaacctccagagcctacaacatgccttggtcatggttcaagctattcttgaagatgcagaggagcaacaactgaccaacaaagccgtccggctttggctgtcgaagctcaagaacgcagctcatgatgctgatgaccttctggacttcgttgctgctaaagacatcattatgggccctggaaaattatgtaagtggacctatccaattccaaaatacatagatgctgataaagtcagaaagatgctttcggctttagaaatgacagtaaacgagggtctattgaagtttaattttcgagagcctggttcagtagataggcaatctgataaaagggagactagctcttttgtttctgagtcagaaatatatggaagagctgatgacaaagagaagttagtgaaactgttactatcttctgagtgtcaccaggatggatatgctatgtgtattgactgtattccgataattggtattggaggaattggcaagacgactcttgcccagttggcatataatgatgagcgggtaatccaacattttgatattaggctgtggacttttgtctcggatgatttcaatatcaagaagatcatgaagtcaattattgagtctgtaacaagggaaaattgcaagttctcggagagtgacttacttcaagctcggctttggcatttgctgcacaacaaaagatatctaattgtgttggatgatgtttggactgaagatcaagatgactgggacaaactaagacctttgtttagaggaggtgttgatggatgcaaaatcattatcacttcccgcaataaaaaagtcccattcatgatggactccccaacttcggcatattatttgaagggtttgatggaggatgactgctgggctttgttcaagcaacgagcttttggacaaggagaagaagagaagtatgccaacctctgcctgattggaaagaagattgcgaagaaatgtggtggtgtaccattggcagccaaaagtttgggaagtgttatgcgctttaaaagagaagaacggcaatggttgtttatgcaaaatagtgaactgtgggaagtagaaggatggaaacaaagaattttacctgcgcttatgttgagttatcttcatctgccatcacatcttcgacaatgctttgcgttctgctccatatttcctaaaaattatgaattcaagaagcataaattagttctcttgtggatggcagagggcttaattctagaagaaagtggcaagcgaccggaagacattggtgatgaatacttttctgatttgctgtggatgtctttctttcaagaagtagagttacgtgatggtggcagcacagttggatacaaaatgaatgatgtcattcatgaccttgcacgatatgtttctggaaatgaatccgttatgcttgaacaaggtcttccaccgagtaatccagcacaaattcgccgctcatccattatttataaatacagggaacttacaattccagaagctctctttgaagcagcacatttacgaactgtcttattgattggagaatatggacttctaaaagacagtagtaaaatgttattaagttgcatatacttgcgtgtgctggacttgaacaactgtgatgttcattttttgccgtcatcaataggtgggttgatatgtttgaggtatctcgacttgtcttatacgcctatctccaagttgccggcaaccacaaggaatctctgttcattgcagactttaaacctgtctggatgtcataatcttagagtcttgccagacttcgaagtaatggccggcctaagacatctcaatatagctggatgtgataggttgtggtatatacctcctggtattaaaatgttacttcaacttcagacactgccattatatttcgttcgcaagaatcccggtaatcttggtgcactagagaatttgaatctttatggggagttgaatattacacgcttggagaatgtgagaagcgcaactggagctcaatcatctggactgaagatgaaagaaaatcttgagtcgttgggattatgttggggagattttgaagatgtgaacgacaggaaaaaatcattgaagaaactagccaagtccccagccaaaaggttttttttagaagcaggggtacggtggcatgaacctgatgctgaagaggcggtagaaattcttgatggcctgaaaccacacaagaatctgaaaaagctagttatacatggttatccaggaatcagatttccagattggactctcccaaatgtaattgcagttgatttgtccaattgtaagaactgtgaatatcttccagcccttgggaatcttcttctactcaagactctttctctgcacggaatggagagcgtgacacgcattggttttgagttctatggtgatagtacagacatatgcttttcatcacttgaagaactatcgctcagtgattttccgaacttggaaacctggtcgagtgcaaataatgaaaatgcatttccgagcttgaggaagttcaccataaataggtgtcccaagttgacacatatcccattttgtttgtctcttcaacatttggagctgcgggattgtaatccatcttcaatcttcattggaggtttaactttgctgacagtgcttgtaatagaaaaacttccagagctgcgctctctaccaccagggctttctgcatcagctaatctgtcttctctggaggtcttatcttgccccaagctttgttccctgcctttggagatcggaaacctcactgcgctgaaatcattaaccattcgttggtgtgatgagttgtcctctctgccacagagtttgcagaacctcaaagctctggagtcactagagattagtgactgtcatagtataatctcgatgccagatggtgcaattggaggtttgagttcccttcaaactttgtccattgagaactgcagtaatctgacgtctttgtcatcgagtttggaacaacttgctttccttgagcggttcaccattatgtactgtccaaaccttggttctttcgctgagggtgtgcaacacctctcaacccttcgaagtttgtctatattgagctgtccttggtttgattctttgcctgaagggttgcaaatggtcaagacgttgcagtgtcttgaaattagtagctgcccgaatttcacagctttgccagagtgggttgagaagcttgcttcactcagatctttgaccatttttgattgtgctaatttgaaactgttgccacaaagtctaaagcttctcactaaacttcagcacctctctattcaagaatgtcctgagcttgagagaagatgtagacaaggaagcggtgaggaatggcttaaaatagctcatgttccacataagtacattggatcaccggagatcaggcagtctggtagtggagcaagcacatccagcagctcttcttttgatacatctgtttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03460 map03460
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1185

Amino Acids

133.45

Weight (kDa)

6.05

Isoelectric Point (pI)

53.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1566
AasI GACNNNNNNGTC 1 cut(s) 3061
AatII GACGTC 1 cut(s) 3059
Acc36I ACCTGC 1 cut(s) 1204
AccB7I CCANNNNNTGG 3 cut(s) 2420, 2892, 3125
AccBSI CCGCTC 3 cut(s) 622, 1551, 3097
AccI GTMKAC 1 cut(s) 3427
AciI CCGC 8 cut(s) 77, 622, 898, 1549, 2267, 2683, 3097, 3438
AclWI GGATC 1 cut(s) 3493
AcoI YGGCCR 1 cut(s) 1890
AcsI RAATTY 6 cut(s) 1188, 1280, 1542, 2029, 2274, 3265
AcuI CTGAAG 6 cut(s) 840, 1955, 2129, 2280, 3231, 3365
AcyI GRCGYC 1 cut(s) 3056
AfaI GTAC 5 cut(s) 1077, 2238, 2506, 3113, 3479
AfiI CCNNNNNNNGG 7 cut(s) 566, 937, 2420, 2625, 2848, 2892, 3125
AjnI CCWGG 7 cut(s) 274, 400, 525, 1945, 2332, 2567, 2776
AjuI GAANNNNNNNTTGG 2 cut(s) 3112, 3144
AloI GAACNNNNNNTCC 2 cut(s) 1807, 1839
Alw21I GWGCWC 2 cut(s) 2023, 2095
Alw26I GTCTC 3 cut(s) 428, 667, 2667
Alw44I GTGCAC 1 cut(s) 2019
AlwI GGATC 1 cut(s) 3493
AlwNI CAGNNNCTG 1 cut(s) 1978
AoxI GGCC 4 cut(s) 271, 1890, 1894, 2284
ApaI GGGCCC 1 cut(s) 275
ApaLI GTGCAC 1 cut(s) 2019
ApoI RAATTY 6 cut(s) 1188, 1280, 1542, 2029, 2274, 3265
Asp700I GAANNNNTTC 2 cut(s) 2409, 2751
AspLEI GCGC 5 cut(s) 1113, 1201, 2084, 2766, 2872
AspS9I GGNCC 3 cut(s) 271, 272, 294
AsuC2I CCSGG 1 cut(s) 2007
AsuHPI GGTGA 8 cut(s) 12, 515, 1376, 2510, 2608, 3094, 3452, 3480
AsuII TTCGAA 2 cut(s) 1881, 3166
AvaII GGWCC 1 cut(s) 294
BaeGI GKGCMC 2 cut(s) 275, 2023
BaeI ACNNNNGTAYC 1 cut(s) 3537
BanII GRGCYC 2 cut(s) 275, 2095
BarI GAAGNNNNNNTAC 6 cut(s) 1401, 1433, 2220, 2252, 2683, 2715
BbsI GAAGAC 3 cut(s) 1362, 1511, 2796
Bbv12I GWGCWC 2 cut(s) 2023, 2095
BbvCI CCTCAGC 1 cut(s) 3138
BceAI ACGGC 3 cut(s) 167, 1145, 1717
BciT130I CCWGG 7 cut(s) 276, 402, 527, 1947, 2334, 2569, 2778
BciVI GTATCC 1 cut(s) 1436
BcnI CCSGG 1 cut(s) 2007
BcoDI GTCTC 3 cut(s) 428, 667, 2667
BfaI CTAG 6 cut(s) 438, 1331, 2024, 2195, 2315, 2954
BfmI CTRYAG 1 cut(s) 3043
BfuAI ACCTGC 1 cut(s) 1204
BfuI GTATCC 1 cut(s) 1436
BglI GCCNNNNNGGC 1 cut(s) 605
BglII AGATCT 1 cut(s) 3311
Bme1390I CCNGG 8 cut(s) 276, 402, 527, 1947, 2007, 2334, 2569, 2778
Bme18I GGWCC 1 cut(s) 294
BmgT120I GGNCC 3 cut(s) 271, 272, 294
BmiI GGNNCC 1 cut(s) 273
BmrFI CCNGG 8 cut(s) 276, 402, 527, 1947, 2007, 2334, 2569, 2778
BmrI ACTGGG 3 cut(s) 53, 595, 844
BmsI GCATC 9 cut(s) 62, 142, 214, 310, 330, 866, 2245, 2798, 2976
BmuI ACTGGG 3 cut(s) 53, 595, 844
BoxI GACNNNNGTC 1 cut(s) 659
BpiI GAAGAC 3 cut(s) 1362, 1511, 2796
BplI GAGNNNNNCTC 6 cut(s) 425, 457, 2750, 2782, 2894, 2926
BpmI CTGGAG 4 cut(s) 89, 2109, 2831, 2966
Bpu10I CCTNAGC 2 cut(s) 3138, 3408
Bpu14I TTCGAA 2 cut(s) 1881, 3166
BpuEI CTTGAG 6 cut(s) 191, 2147, 2423, 2626, 3113, 3434
BpuMI CCSGG 1 cut(s) 2007
BsaAI YACGTR 1 cut(s) 1421
BsaBI GATNNNNATC 1 cut(s) 2691
BsaHI GRCGYC 1 cut(s) 3056
BsaJI CCNNGG 6 cut(s) 123, 274, 2419, 2777, 3124, 3191
BsaWI WCCGGW 2 cut(s) 1351, 3490
Bsc4I CCNNNNNNNGG 7 cut(s) 566, 937, 2420, 2625, 2848, 2892, 3125
Bse118I RCCGGY 2 cut(s) 1801, 1892
Bse1I ACTGG 4 cut(s) 59, 601, 839, 2092
Bse3DI GCAATG 2 cut(s) 1139, 1826
Bse8I GATNNNNATC 1 cut(s) 2691
BseBI CCWGG 7 cut(s) 276, 402, 527, 1947, 2334, 2569, 2778
BseDI CCNNGG 6 cut(s) 123, 274, 2419, 2777, 3124, 3191
BseJI GATNNNNATC 1 cut(s) 2691
BseLI CCNNNNNNNGG 7 cut(s) 566, 937, 2420, 2625, 2848, 2892, 3125
BseMI GCAATG 2 cut(s) 1139, 1826
BseMII CTCAG 6 cut(s) 444, 507, 2557, 3129, 3322, 3399
BseNI ACTGG 4 cut(s) 59, 601, 839, 2092
BseRI GAGGAG 2 cut(s) 173, 876
BseSI GKGCMC 2 cut(s) 275, 2023
BseYI CCCAGC 2 cut(s) 975, 2206
BsgI GTGCAG 2 cut(s) 761, 2438
Bsh1285I CGRYCG 1 cut(s) 1352
BshFI GGCC 4 cut(s) 273, 1892, 1896, 2286
BsiEI CGRYCG 1 cut(s) 1352
BsiHKAI GWGCWC 2 cut(s) 2023, 2095
BsiSI CCGG 6 cut(s) 187, 1352, 1802, 1893, 2007, 3491
BslFI GGGAC 5 cut(s) 101, 851, 896, 2188, 2616
BslI CCNNNNNNNGG 7 cut(s) 566, 937, 2420, 2625, 2848, 2892, 3125
BsmAI GTCTC 3 cut(s) 428, 667, 2667
BsmFI GGGAC 5 cut(s) 101, 851, 896, 2188, 2616
BsnI GGCC 4 cut(s) 273, 1892, 1896, 2286
Bsp119I TTCGAA 2 cut(s) 1881, 3166
Bsp120I GGGCCC 1 cut(s) 271
Bsp1286I GDGCHC 3 cut(s) 275, 2023, 2095
Bsp143I GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
BspACI CCGC 8 cut(s) 77, 622, 898, 1549, 2267, 2683, 3097, 3438
BspANI GGCC 4 cut(s) 273, 1892, 1896, 2286
BspCNI CTCAG 6 cut(s) 445, 508, 2556, 3130, 3321, 3400
BspHI TCATGA 4 cut(s) 220, 690, 918, 1465
BspLI GGNNCC 1 cut(s) 273
BspMAI CTGCAG 1 cut(s) 3047
BspMI ACCTGC 1 cut(s) 1204
BspPI GGATC 1 cut(s) 3493
BspQI GCTCTTC 2 cut(s) 466, 3541
BspT104I TTCGAA 2 cut(s) 1881, 3166
BsrBI CCGCTC 3 cut(s) 622, 1551, 3097
BsrDI GCAATG 2 cut(s) 1139, 1826
BsrFI RCCGGY 2 cut(s) 1801, 1892
BsrI ACTGG 4 cut(s) 59, 601, 839, 2092
BssAI RCCGGY 2 cut(s) 1801, 1892
BssECI CCNNGG 6 cut(s) 123, 274, 2419, 2777, 3124, 3191
BssMI GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
BssNI GRCGYC 1 cut(s) 3056
BssT1I CCWWGG 4 cut(s) 123, 2419, 3124, 3191
Bst2UI CCWGG 7 cut(s) 276, 402, 527, 1947, 2334, 2569, 2778
Bst6I CTCTTC 5 cut(s) 466, 1011, 2256, 2670, 3541
BstACI GRCGYC 1 cut(s) 3056
BstAPI GCANNNNNTGC 1 cut(s) 775
BstBAI YACGTR 1 cut(s) 1421
BstBI TTCGAA 2 cut(s) 1881, 3166
BstC8I GCNNGC 6 cut(s) 75, 1346, 1803, 1894, 3300, 3520
BstDEI CTNAG 9 cut(s) 453, 516, 845, 1862, 1898, 2543, 3138, 3308, 3408
BstHHI GCGC 5 cut(s) 1113, 1201, 2084, 2766, 2872
BstKTI GATC 7 cut(s) 39, 690, 826, 2856, 3314, 3488, 3498
BstMAI GTCTC 3 cut(s) 428, 667, 2667
BstMBI GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
BstMCI CGRYCG 1 cut(s) 1352
BstMWI GCNNNNNNNGC 9 cut(s) 202, 224, 605, 775, 2090, 2264, 2475, 2734, 3528
BstNI CCWGG 7 cut(s) 276, 402, 527, 1947, 2334, 2569, 2778
BstNSI RCATGY 1 cut(s) 122
BstPAI GACNNNNGTC 1 cut(s) 659
BstSCI CCNGG 8 cut(s) 274, 400, 525, 1945, 2005, 2332, 2567, 2776
BstSFI CTRYAG 1 cut(s) 3043
BstSLI GKGCMC 2 cut(s) 275, 2023
BstV2I GAAGAC 3 cut(s) 1362, 1511, 2796
BstX2I RGATCY 1 cut(s) 3311
BstXI CCANNNNNNTGG 1 cut(s) 1096
BstYI RGATCY 1 cut(s) 3311
BsuI GTATCC 1 cut(s) 1436
BsuRI GGCC 4 cut(s) 273, 1892, 1896, 2286
BtsI GCAGTG 3 cut(s) 1976, 2865, 3245
BtsIMutI CAGTG 5 cut(s) 1976, 2551, 2739, 2865, 3245
BveI ACCTGC 1 cut(s) 1204
Cac8I GCNNGC 6 cut(s) 75, 1346, 1803, 1894, 3300, 3520
CaiI CAGNNNCTG 1 cut(s) 1978
CciI TCATGA 4 cut(s) 220, 690, 918, 1465
CfoI GCGC 5 cut(s) 1113, 1201, 2084, 2766, 2872
Cfr10I RCCGGY 2 cut(s) 1801, 1892
Cfr13I GGNCC 3 cut(s) 271, 272, 294
CsiI ACCWGGT 1 cut(s) 2567
Csp6I GTAC 5 cut(s) 1076, 2237, 2505, 3112, 3478
CspCI CAANNNNNGTGG 2 cut(s) 2907, 2942
CviQI GTAC 5 cut(s) 1076, 2237, 2505, 3112, 3478
DdeI CTNAG 9 cut(s) 453, 516, 845, 1862, 1898, 2543, 3138, 3308, 3408
DpnI GATC 7 cut(s) 38, 689, 825, 2855, 3313, 3487, 3497
DpnII GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
DraI TTTAAA 2 cut(s) 1117, 1839
DrdI GACNNNNNNGTC 1 cut(s) 3061
DseDI GACNNNNNNGTC 1 cut(s) 3061
EaeI YGGCCR 1 cut(s) 1890
Eam1104I CTCTTC 5 cut(s) 466, 1011, 2256, 2670, 3541
EarI CTCTTC 5 cut(s) 466, 1011, 2256, 2670, 3541
Ecl136II GAGCTC 1 cut(s) 2093
Eco130I CCWWGG 4 cut(s) 123, 2419, 3124, 3191
Eco24I GRGCYC 2 cut(s) 275, 2095
Eco32I GATATC 2 cut(s) 82, 791
Eco47I GGWCC 1 cut(s) 294
Eco53kI GAGCTC 1 cut(s) 2093
Eco57I CTGAAG 6 cut(s) 840, 1955, 2129, 2280, 3231, 3365
EcoICRI GAGCTC 1 cut(s) 2093
EcoO109I RGGNCCY 1 cut(s) 272
EcoRI GAATTC 1 cut(s) 1280
EcoRII CCWGG 7 cut(s) 274, 400, 525, 1945, 2332, 2567, 2776
EcoRV GATATC 2 cut(s) 82, 791
EcoT14I CCWWGG 4 cut(s) 123, 2419, 3124, 3191
EcoT22I ATGCAT 1 cut(s) 2596
EcoT38I GRGCYC 2 cut(s) 275, 2095
ErhI CCWWGG 4 cut(s) 123, 2419, 3124, 3191
FalI AAGNNNNNCTT 6 cut(s) 129, 161, 747, 779, 2109, 2141
FaqI GGGAC 5 cut(s) 101, 851, 896, 2188, 2616
FauI CCCGC 3 cut(s) 615, 905, 2676
FauNDI CATATG 1 cut(s) 2513
FblI GTMKAC 1 cut(s) 3427
FriOI GRGCYC 2 cut(s) 275, 2095
FseI GGCCGGCC 1 cut(s) 1896
FspBI CTAG 6 cut(s) 438, 1331, 2024, 2195, 2315, 2954
GlaI GCGC 5 cut(s) 1112, 1200, 2083, 2765, 2871
GsaI CCCAGC 2 cut(s) 979, 2210
GsuI CTGGAG 4 cut(s) 89, 2109, 2831, 2966
HaeIII GGCC 4 cut(s) 273, 1892, 1896, 2286
HapII CCGG 6 cut(s) 187, 1352, 1802, 1893, 2007, 3491
HhaI GCGC 5 cut(s) 1113, 1201, 2084, 2766, 2872
Hin1I GRCGYC 1 cut(s) 3056
Hin6I GCGC 5 cut(s) 1111, 1199, 2082, 2764, 2870
HinP1I GCGC 5 cut(s) 1111, 1199, 2082, 2764, 2870
HincII GTYRAC 1 cut(s) 2640
HindII GTYRAC 1 cut(s) 2640
HindIII AAGCTT 4 cut(s) 71, 2831, 3296, 3365
HpaII CCGG 6 cut(s) 187, 1352, 1802, 1893, 2007, 3491
HphI GGTGA 8 cut(s) 12, 515, 1376, 2510, 2608, 3094, 3452, 3480
HpyAV CCTTC 7 cut(s) 88, 245, 946, 1166, 3029, 3173, 3206
HpyCH4IV ACGT 4 cut(s) 9, 1420, 3056, 3233
HpyF10VI GCNNNNNNNGC 9 cut(s) 202, 224, 605, 775, 2090, 2264, 2475, 2734, 3528
HpyF3I CTNAG 9 cut(s) 453, 516, 845, 1862, 1898, 2543, 3138, 3308, 3408
HpySE526I ACGT 4 cut(s) 9, 1420, 3056, 3233
Hsp92I GRCGYC 1 cut(s) 3056
HspAI GCGC 5 cut(s) 1111, 1199, 2082, 2764, 2870
KroI GCCGGC 2 cut(s) 1801, 1892
KroNI GCCGGC 2 cut(s) 1803, 1894
Kzo9I GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
LguI GCTCTTC 2 cut(s) 466, 3541
LmnI GCTCC 5 cut(s) 160, 1262, 2090, 2677, 3515
LweI GCATC 9 cut(s) 62, 142, 214, 310, 330, 866, 2245, 2798, 2976
MabI ACCWGGT 1 cut(s) 2567
MaeI CTAG 6 cut(s) 438, 1331, 2024, 2195, 2315, 2954
MaeII ACGT 4 cut(s) 9, 1420, 3056, 3233
MaeIII GTNAC 9 cut(s) 504, 521, 712, 743, 1416, 1959, 2470, 2949, 2963
MalI GATC 7 cut(s) 38, 689, 825, 2855, 3313, 3487, 3497
MbiI CCGCTC 3 cut(s) 622, 1551, 3097
MboI GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
MfeI CAATTG 2 cut(s) 2389, 3000
MflI RGATCY 1 cut(s) 3311
MhlI GDGCHC 3 cut(s) 275, 2023, 2095
MlyI GAGTC 9 cut(s) 464, 586, 716, 920, 1875, 2138, 2350, 2437, 2957
MmeI TCCRAC 3 cut(s) 655, 783, 1420
Mph1103I ATGCAT 1 cut(s) 2596
MroNI GCCGGC 2 cut(s) 1801, 1892
MroXI GAANNNNTTC 2 cut(s) 2409, 2751
MseI TTAA 9 cut(s) 387, 1116, 1325, 1676, 1838, 1953, 2720, 2882, 3453
MslI CAYNNNNRTG 3 cut(s) 266, 528, 3107
MspI CCGG 6 cut(s) 187, 1352, 1802, 1893, 2007, 3491
MspR9I CCNGG 8 cut(s) 276, 402, 527, 1947, 2007, 2334, 2569, 2778
MunI CAATTG 2 cut(s) 2389, 3000
MvaI CCWGG 7 cut(s) 276, 402, 527, 1947, 2334, 2569, 2778
MwoI GCNNNNNNNGC 9 cut(s) 202, 224, 605, 775, 2090, 2264, 2475, 2734, 3528
NaeI GCCGGC 2 cut(s) 1803, 1894
NciI CCSGG 1 cut(s) 2007
NdeI CATATG 1 cut(s) 2513
NdeII GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
NgoMIV GCCGGC 2 cut(s) 1801, 1892
NlaIV GGNNCC 1 cut(s) 273
NmeAIII GCCGAG 1 cut(s) 739
NmuCI GTSAC 5 cut(s) 521, 743, 2470, 2949, 2963
NsiI ATGCAT 1 cut(s) 2596
NspI RCATGY 1 cut(s) 122
NspV TTCGAA 2 cut(s) 1881, 3166
PagI TCATGA 4 cut(s) 220, 690, 918, 1465
PciSI GCTCTTC 2 cut(s) 466, 3541
PdiI GCCGGC 2 cut(s) 1803, 1894
PdmI GAANNNNTTC 2 cut(s) 2409, 2751
PfeI GAWTC 8 cut(s) 1496, 1816, 2002, 2035, 2302, 2337, 2425, 3200
PflMI CCANNNNNTGG 3 cut(s) 2420, 2892, 3125
PfoI TCCNGGA 1 cut(s) 2332
PleI GAGTC 9 cut(s) 463, 586, 715, 920, 1874, 2137, 2350, 2437, 2956
PpsI GAGTC 9 cut(s) 463, 586, 715, 920, 1874, 2137, 2350, 2437, 2956
Ppu21I YACGTR 1 cut(s) 1421
PshAI GACNNNNGTC 1 cut(s) 659
PsiI TTATAA 1 cut(s) 1566
Psp124BI GAGCTC 1 cut(s) 2095
Psp6I CCWGG 7 cut(s) 274, 400, 525, 1945, 2332, 2567, 2776
PspFI CCCAGC 2 cut(s) 975, 2206
PspGI CCWGG 7 cut(s) 274, 400, 525, 1945, 2332, 2567, 2776
PspN4I GGNNCC 1 cut(s) 273
PspOMI GGGCCC 1 cut(s) 271
PspPI GGNCC 3 cut(s) 271, 272, 294
PstI CTGCAG 1 cut(s) 3047
PstNI CAGNNNCTG 1 cut(s) 1978
PsuI RGATCY 1 cut(s) 3311
RigI GGCCGGCC 1 cut(s) 1896
RsaI GTAC 5 cut(s) 1077, 2238, 2506, 3113, 3479
RsaNI GTAC 5 cut(s) 1076, 2237, 2505, 3112, 3478
RseI CAYNNNNRTG 3 cut(s) 266, 528, 3107
SacI GAGCTC 1 cut(s) 2095
SapI GCTCTTC 2 cut(s) 466, 3541
SaqAI TTAA 9 cut(s) 387, 1116, 1325, 1676, 1838, 1953, 2720, 2882, 3453
Sau3AI GATC 7 cut(s) 36, 687, 823, 2853, 3311, 3485, 3495
Sau96I GGNCC 3 cut(s) 271, 272, 294
SchI GAGTC 9 cut(s) 464, 586, 716, 920, 1875, 2138, 2350, 2437, 2957
ScrFI CCNGG 8 cut(s) 276, 402, 527, 1947, 2007, 2334, 2569, 2778
SduI GDGCHC 3 cut(s) 275, 2023, 2095
SexAI ACCWGGT 1 cut(s) 2567
SfaNI GCATC 9 cut(s) 62, 142, 214, 310, 330, 866, 2245, 2798, 2976
SfcI CTRYAG 1 cut(s) 3043
SfuI TTCGAA 2 cut(s) 1881, 3166
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 3 cut(s) 266, 528, 3107
SmlI CTYRAG 6 cut(s) 206, 2126, 2438, 2605, 3092, 3413
SmoI CTYRAG 6 cut(s) 206, 2126, 2438, 2605, 3092, 3413
SsiI CCGC 8 cut(s) 77, 622, 898, 1549, 2267, 2683, 3097, 3438
SspI AATATT 1 cut(s) 2056
SspMI CTAG 6 cut(s) 438, 1331, 2024, 2195, 2315, 2954
SstI GAGCTC 1 cut(s) 2095
StyD4I CCNGG 8 cut(s) 274, 400, 525, 1945, 2005, 2332, 2567, 2776
StyI CCWWGG 4 cut(s) 123, 2419, 3124, 3191
TaiI ACGT 4 cut(s) 12, 1423, 3059, 3236
TaqI TCGA 9 cut(s) 200, 394, 1237, 1770, 1881, 2573, 2984, 3068, 3166
TatI WGTACW 3 cut(s) 2504, 3111, 3477
TauI GCSGC 1 cut(s) 1551
TfiI GAWTC 8 cut(s) 1496, 1816, 2002, 2035, 2302, 2337, 2425, 3200
Tru1I TTAA 9 cut(s) 387, 1116, 1325, 1676, 1838, 1953, 2720, 2882, 3453
Tru9I TTAA 9 cut(s) 387, 1116, 1325, 1676, 1838, 1953, 2720, 2882, 3453
TscAI CASTG 5 cut(s) 1983, 2551, 2739, 2872, 3245
TseFI GTSAC 5 cut(s) 521, 743, 2470, 2949, 2963
Tsp45I GTSAC 5 cut(s) 521, 743, 2470, 2949, 2963
TspGWI ACGGA 2 cut(s) 1489, 2472
TspRI CASTG 5 cut(s) 1983, 2551, 2739, 2872, 3245
Van91I CCANNNNNTGG 3 cut(s) 2420, 2892, 3125
VneI GTGCAC 1 cut(s) 2019
VpaK11BI GGWCC 1 cut(s) 294
XapI RAATTY 6 cut(s) 1188, 1280, 1542, 2029, 2274, 3265
XbaI TCTAGA 1 cut(s) 1330
XceI RCATGY 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 3427
XmnI GAANNNNTTC 2 cut(s) 2409, 2751
XspI CTAG 6 cut(s) 438, 1331, 2024, 2195, 2315, 2954
ZraI GACGTC 1 cut(s) 3057
Zsp2I ATGCAT 1 cut(s) 2596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.