Rmu_sc0008668.1_g000002

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008668.1
Physical Location & Seq
Reverse (-)
1699 .. 5649
3951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008668.1_g000002.1.cds

Sequence Viewer

Length: 3951 bp
atggcagacgtagttttatcaccagctttgcaagtgatctttgacagagtagcatccccagtcctacaaaagcttgcggatatctgggacatgaaggacaacctccagagcctacaacatgccttggtcatggttcaagctattcttgaagatgcagaggagcaacaactgaccaacaaagccgtccggctttggctgttgaagctcaagaacgcagctcatgatgctgatgaccttctggatttcgttacggccaaaggaaaagataagtggactttagcaatttcaaaatccatagatgctgacaaagtcagaaagatgcttttgacattagaaatgacagtaaacgagggtctattgaagtttaattttcgagagcctggtacagtagataggcaatctgataaaagggagactagctcttttgttatggagtcagaaatatatggaagagctgatgacaaagagaagttagtgaaactcctactatcttctgagtgtcaccaggatggttatgctatgtgtattccgataattggtattggaggaattggcaagacgactcttgctcagttggcatataatgatgagcgggtaatccaacattttgatgttaggctgtggacttttgtctcgcatgatttcaatatcaagaagatcatgaagtcaattattgagtctgtaacaagggaagattgcaagttctcggagagtgacttacttcaatctcgactttggcatttgctgcacaacaaaagatatctaattgtgttggatgatgtttggactgaagatcaagatgactgggacaaactaagacctttgtttagacgaggtgttgatggatgcaaaatcattatcacttcccgcaataaaaaaatcccattcatgatggactccctaacttcggcatactatttaaagggtttgatggaggatgactgctgggttttgttcaagcaacgggcttttggacgaggagaagaagagaagtatcccgatctctgcctgattggaaagctggatgatttcaatatcaagaagatcatgaagtcaattattgagtctgtaacaagggaaaattgcaagttctcggagagtgacttacttcaagctcggctttggcatttgctgcacaacaaaagatatctaattgtgttggatgatgtttgtactgaagatcaagatgactgggacaaactaagacctttgtttagaggaggtgttgatggatgcaaaatcattatcacttcccgcaataaaaaagtcccattcatgatggactccccaacttcggcatattatttgaagggtttgatggaggatgactgctgggctttgttcaagcaacgagcttttggacaaggagaagaagagaagtatgccaacctctgcctgattggaaagaagattgcgaagaaatgtggtggtgtaccattggcagccaaaagtttgggaagtgttatgcgctttaaaagagaagaacggcaatggttgtttatgcaaaatagtgaactttgggaagtagatggatgcaaacagagaattttacctgcgcttatgttaagttatcttcatctgccagcacatcttcgacaatgctttgcattctgctccatatttcctaaaaattatgaattcaagaagcataaattagttctcttgtggatggcagagggcttaattctagaagaaggtagcaagcgacccgaagacattggtgatgaatacttttctgatttgctgtggatgtctttctttcaggaagtagagttacgtgatggtggtagcacaattggatacaaaatgaatgatgtcattcatgatcttgcacgatatgtttctggaaatgaatccgttatgcttgaacaaggtcttccaccgagtaatccagcacaaattcgccgctcatccattatttataaatacagggaagttacaattccagaagctctctttgaagcagcacatttacgaactgtcttattgattggagaatatggacttctaaaagacagtagtaaaatgttattaagttgcatatacttgtgtgtgctggacttgaacaactgtgatgttcattttttgccgtcatcaataggtgggttgatatgtttgaggtatctcgacttgtcttatacgcctatctccaagttgccggcaaccacaaggaatctctgttcattgcagactttaaacctctctggatgtcataatcttagagtcttgcgagactttgaagcaatgaccagcctaagacatctcaatataactggatgtgatagcttgtggtatatatctccttgtattaaaatgttacttcaacttcagacactgccattatatttcgttcgcaagaatcccggtaatcttggtgcactagagaatttgaatctttatggggagttgaatattacacacttggagaatataagaaatgcaactggagctcaatcatctggactgaagatgaaagaaaatattgagtcgttgggattatactggggagattttggagatgtgcccgataggaatagatcaatattgaagaaaccagccaagtcctcagccaagtcctcagccaaatggtactgttcagaagtagggatgcggtggcatgaacctgatgctgaagaggcggtagaaattcttgatggcctgaaaccacacaataatttgaaaaagctagttatacatggttatccaggaatcagatttccagattggaaactgccaaatctaattgcagttgatttgtccaattgtaagaactgtgaatatcttccagcccttgggaatcttcttctactcaagactctttctctgcatggaatggagagcgtgacgcgcattggctatgagttctatgatagtacagacatatgcttttcatcacttgaagaactatcgctcagtgattttccgaacttggaaacctggtcgagtgcaaataatgaaaatgcatttccgagcttgaggaagttaaccatacgtaggtgtcccaagttgacacagataccattttgtttgtctcttcaacatttggagctgcgggattgtaatccatcttcaatcttcattggaggtttaactttgctgacagtgcttgtaatagaaaaacttccagagctgcgcactctaccacaagggctttctgcatcagctagtctgtcttctctggaggtcttatcttgccccaagctttgttcactgcctttggagatgggaaacctcactgcactgaaatcattgaccattcgttggtgtgatgagttgtcctctctgccactgagtttgcagaacctcaaagctctggagtcactagagattagtgactgtcatagtataatctcgatgccagatggtgcaattggaggtttgagttcccttcaaactttgtccattgagaactgcagtagtctgacttctttgtcttcgagtctggaacaactcgctttccttgagcggttcaccattatgtactgtccaaaccttggttctttcccagagggtgtgcaacacctctcaacccttcgaactttgtctatcttgagctgtccttggtttgattctttgccagaagggttgcgaatggtcaagacgttgcagtgtctggaaattagtagctgcccgaatttcacagctttgccagagtgggttgagaagcttgcttcactcagatctttgaccattttggattgtcctaatttgaaactgttgccacaaagtctagaacttctcactaaactccagcacctctctattcaagaatgtcccgagcttgaggaaagatgtagacaaggcagtggtgaggattggctgaaaatagctcatgttccacataagtacattggatcaccagagatgaggcggtccagtagtgaagcaagtacatcgggcagctcttctgttgaaacatctgtacagcaagcaactgcttcatcatcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1316

Amino Acids

148.96

Weight (kDa)

5.99

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000400)

Species Orthologous Gene IDs
malus_domestica MD05G1050700.v1.1 MD05G1050800.v1.1 MD08G1110700.v1.1 MD15G1090000.v1.1 MD15G1090100.v1.1 MD15G1090300.v1.1
prunus_persica Prupe.1G541300_v2.0.a1 Prupe.1G541300_v2.0.a1 Prupe.8G077100_v2.0.a1 Prupe.8G077200_v2.0.a1 Prupe.8G077500_v2.0.a1 Prupe.8G077600_v2.0.a1 Prupe.8G211300_v2.0.a1
pyrus_communis pycom05g04280 pycom08g09220 pycom15g08440
rosa_chinensis RchiOBHm_Chr1g0348461 RchiOBHm_Chr1g0348561 RchiOBHm_Chr6g0269201 RchiOBHm_Chr6g0269411 RchiOBHm_Chr6g0269421 RchiOBHm_Chr6g0269431 RchiOBHm_Chr7g0232901 RchiOBHm_Chr7g0232931 RchiOBHm_Chr7g0232961 RchiOBHm_Chr7g0232971
rosa_laevigata RLG00000001310
rosa_multiflora Rmu_sc0000091.1_g000001 Rmu_sc0000091.1_g000002 Rmu_sc0000091.1_g000008 Rmu_sc0000743.1_g000003 Rmu_sc0000743.1_g000004 Rmu_sc0005353.1_g000002 Rmu_sc0008668.1_g000002 Rmu_sc0015938.1_g000001 Rmu_ssc0000018.1_g000023 Rmu_ssc0000291.1_g000019 Rmu_ssc0000291.1_g000020 Rmu_ssc0000291.1_g000026 Rmu_ssc0000291.1_g000027
rosa_roxburghii Rroxscaffold_3G00227800 Rroxscaffold_3G00227820 Rroxscaffold_4G00306930 Rroxscaffold_4G00306950 Rroxscaffold_7G00198730
rosa_rugosa Rorug01G0194900 Rorug01G0194900 Rorug01G0195000 Rorug01G0195100 Rorug06G0045900 Rorug06G0046100 Rorug06G0047500 Rorug06G0047500 Rorug06G0047600 Rorug06G0047700 Rorug07G0276400 Rorug07G0276600 Rorug07G0276800.1 Rorug07G0276900
rosa_samantha Rh1AG213000 Rh1AG213100 Rh1BG179500 Rh1CG197300 Rh1CG197400 Rh1DG209600 Rh6AG166200 Rh6AG168000 Rh6AG168100 Rh6AG168200 Rh6BG171700 Rh6BG171800 Rh6BG173500 Rh6CG165300 Rh6CG167500 Rh6CG167600 Rh6DG156900 Rh6DG159400 Rh6DG159500 Rh6DG159600 Rh7AG431600 Rh7AG431700 Rh7AG431800 Rh7AG432100 Rh7AG432200 Rh7BG404700 Rh7BG404800 Rh7BG404900 Rh7BG405000 Rh7CG450600 Rh7CG450700 Rh7CG450800 Rh7CG451200 Rh7DG421300
rosa_wichuraiana Rw0G004710 Rw0G010410 Rw1G018020 Rw1G018040 Rw6G014350 Rw6G014450 Rw6G014470 Rw7G035660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1923
AasI GACNNNNNNGTC 1 cut(s) 3430
Acc16I TGCGCA 1 cut(s) 3134
Acc36I ACCTGC 1 cut(s) 1561
AccB7I CCANNNNNTGG 3 cut(s) 2792, 3261, 3494
AccBSI CCGCTC 3 cut(s) 592, 1908, 3466
AccI GTMKAC 1 cut(s) 3796
AccII CGCG 1 cut(s) 2848
AclWI GGATC 1 cut(s) 3862
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 6 cut(s) 1545, 1637, 1899, 2386, 2646, 3634
AcuI CTGAAG 5 cut(s) 810, 1197, 2312, 2486, 2652
AfaI GTAC 9 cut(s) 385, 1174, 1434, 2591, 2875, 3482, 3848, 3892, 3924
AfiI CCNNNNNNNGG 7 cut(s) 536, 907, 1294, 2792, 2994, 3261, 3494
AjnI CCWGG 4 cut(s) 379, 504, 2704, 2936
AjuI GAANNNNNNNTTGG 2 cut(s) 3481, 3513
AloI GAACNNNNNNTCC 2 cut(s) 2164, 2196
Alw21I GWGCWC 2 cut(s) 2380, 2452
Alw26I GTCTC 4 cut(s) 407, 637, 2226, 3036
Alw44I GTGCAC 1 cut(s) 2376
AlwI GGATC 1 cut(s) 3862
AlwNI CAGNNNCTG 2 cut(s) 2335, 3613
Ama87I CYCGRG 1 cut(s) 3776
AoxI GGCC 2 cut(s) 252, 2656
ApaLI GTGCAC 1 cut(s) 2376
ApeKI GCWGC 9 cut(s) 215, 745, 1132, 1442, 1964, 3049, 3130, 3627, 3900
ApoI RAATTY 6 cut(s) 1545, 1637, 1899, 2386, 2646, 3634
Asp700I GAANNNNTTC 2 cut(s) 2781, 3120
AspLEI GCGC 4 cut(s) 1470, 1558, 2850, 3135
AspS9I GGNCC 1 cut(s) 3873
AsuC2I CCSGG 1 cut(s) 2364
AsuHPI GGTGA 6 cut(s) 12, 494, 1733, 3463, 3821, 3849
AsuII TTCGAA 1 cut(s) 3535
AvaI CYCGRG 1 cut(s) 3776
AvaII GGWCC 1 cut(s) 3873
BaeGI GKGCMC 2 cut(s) 2380, 2526
BanII GRGCYC 1 cut(s) 2452
BarI GAAGNNNNNNTAC 6 cut(s) 1758, 1790, 3052, 3084, 3409, 3441
BbsI GAAGAC 4 cut(s) 1719, 1868, 3165, 3426
Bbv12I GWGCWC 2 cut(s) 2380, 2452
BbvCI CCTCAGC 2 cut(s) 2566, 2578
BbvI GCAGC 9 cut(s) 227, 732, 1119, 1454, 1976, 3036, 3117, 3614, 3912
BceAI ACGGC 4 cut(s) 167, 267, 1502, 2074
BcgI CGANNNNNNTGC 2 cut(s) 3876, 3910
BciT130I CCWGG 4 cut(s) 381, 506, 2706, 2938
BciVI GTATCC 2 cut(s) 1005, 1793
BcnI CCSGG 1 cut(s) 2364
BcoDI GTCTC 4 cut(s) 407, 637, 2226, 3036
BfaI CTAG 7 cut(s) 417, 1688, 2381, 2687, 3165, 3323, 3731
BfmI CTRYAG 1 cut(s) 3412
BfuAI ACCTGC 1 cut(s) 1561
BfuI GTATCC 2 cut(s) 1005, 1793
BglII AGATCT 1 cut(s) 3680
Bme1390I CCNGG 5 cut(s) 381, 506, 2364, 2706, 2938
Bme18I GGWCC 1 cut(s) 3873
BmeT110I CYCGRG 1 cut(s) 3776
BmgT120I GGNCC 1 cut(s) 3873
BmrFI CCNGG 5 cut(s) 381, 506, 2364, 2706, 2938
BmrI ACTGGG 4 cut(s) 53, 814, 1201, 2512
BmuI ACTGGG 4 cut(s) 53, 814, 1201, 2512
BoxI GACNNNNGTC 1 cut(s) 629
BpiI GAAGAC 4 cut(s) 1719, 1868, 3165, 3426
BplI GAGNNNNNCTC 4 cut(s) 404, 436, 3263, 3295
BpmI CTGGAG 5 cut(s) 89, 2466, 3200, 3335, 3734
Bpu10I CCTNAGC 2 cut(s) 2566, 2578
Bpu14I TTCGAA 1 cut(s) 3535
BpuEI CTTGAG 6 cut(s) 191, 2795, 2995, 3482, 3571, 3803
BpuMI CCSGG 1 cut(s) 2364
BsaAI YACGTR 2 cut(s) 1778, 2993
BsaBI GATNNNNATC 1 cut(s) 3060
BsaJI CCNNGG 4 cut(s) 123, 2791, 3493, 3560
Bsc4I CCNNNNNNNGG 7 cut(s) 536, 907, 1294, 2792, 2994, 3261, 3494
Bse118I RCCGGY 1 cut(s) 2158
Bse1I ACTGG 7 cut(s) 59, 809, 1196, 2278, 2449, 2507, 3876
Bse3DI GCAATG 3 cut(s) 1496, 2183, 2250
Bse8I GATNNNNATC 1 cut(s) 3060
BseBI CCWGG 4 cut(s) 381, 506, 2706, 2938
BseDI CCNNGG 4 cut(s) 123, 2791, 3493, 3560
BseJI GATNNNNATC 1 cut(s) 3060
BseLI CCNNNNNNNGG 7 cut(s) 536, 907, 1294, 2792, 2994, 3261, 3494
BseMI GCAATG 3 cut(s) 1496, 2183, 2250
BseMII CTCAG 7 cut(s) 486, 584, 2580, 2592, 2926, 3281, 3691
BseNI ACTGG 7 cut(s) 59, 809, 1196, 2278, 2449, 2507, 3876
BseRI GAGGAG 3 cut(s) 173, 993, 1233
BseSI GKGCMC 2 cut(s) 2380, 2526
BseXI GCAGC 9 cut(s) 227, 732, 1119, 1454, 1976, 3036, 3117, 3614, 3912
BseYI CCCAGC 2 cut(s) 945, 1332
BsgI GTGCAG 3 cut(s) 731, 1118, 3222
Bsh1236I CGCG 1 cut(s) 2848
BshFI GGCC 2 cut(s) 254, 2658
BsiHKAI GWGCWC 2 cut(s) 2380, 2452
BsiHKCI CYCGRG 1 cut(s) 3776
BsiSI CCGG 3 cut(s) 187, 2159, 2364
BslFI GGGAC 6 cut(s) 101, 821, 1208, 1253, 2985, 3759
BslI CCNNNNNNNGG 7 cut(s) 536, 907, 1294, 2792, 2994, 3261, 3494
BsmAI GTCTC 4 cut(s) 407, 637, 2226, 3036
BsmFI GGGAC 6 cut(s) 101, 821, 1208, 1253, 2985, 3759
BsmI GAATGC 1 cut(s) 1607
BsnI GGCC 2 cut(s) 254, 2658
BsoBI CYCGRG 1 cut(s) 3776
Bsp119I TTCGAA 1 cut(s) 3535
Bsp1286I GDGCHC 3 cut(s) 2380, 2452, 2526
Bsp1407I TGTACA 1 cut(s) 3922
BspANI GGCC 2 cut(s) 254, 2658
BspCNI CTCAG 7 cut(s) 487, 583, 2579, 2591, 2925, 3282, 3690
BspFNI CGCG 1 cut(s) 2848
BspHI TCATGA 7 cut(s) 220, 660, 888, 1047, 1275, 1822, 3947
BspMAI CTGCAG 1 cut(s) 3416
BspMI ACCTGC 1 cut(s) 1561
BspPI GGATC 1 cut(s) 3862
BspQI GCTCTTC 2 cut(s) 445, 3910
BspT104I TTCGAA 1 cut(s) 3535
BsrBI CCGCTC 3 cut(s) 592, 1908, 3466
BsrDI GCAATG 3 cut(s) 1496, 2183, 2250
BsrFI RCCGGY 1 cut(s) 2158
BsrGI TGTACA 1 cut(s) 3922
BsrI ACTGG 7 cut(s) 59, 809, 1196, 2278, 2449, 2507, 3876
BssAI RCCGGY 1 cut(s) 2158
BssECI CCNNGG 4 cut(s) 123, 2791, 3493, 3560
BssT1I CCWWGG 4 cut(s) 123, 2791, 3493, 3560
Bst2UI CCWGG 4 cut(s) 381, 506, 2706, 2938
Bst6I CTCTTC 6 cut(s) 445, 981, 1368, 2628, 3039, 3910
BstAPI GCANNNNNTGC 2 cut(s) 745, 1132
BstAUI TGTACA 1 cut(s) 3922
BstBAI YACGTR 2 cut(s) 1778, 2993
BstBI TTCGAA 1 cut(s) 3535
BstC8I GCNNGC 6 cut(s) 75, 1584, 1703, 2160, 3669, 3930
BstFNI CGCG 1 cut(s) 2848
BstHHI GCGC 4 cut(s) 1470, 1558, 2850, 3135
BstMAI GTCTC 4 cut(s) 407, 637, 2226, 3036
BstMWI GCNNNNNNNGC 9 cut(s) 202, 224, 575, 745, 1132, 2447, 2636, 2847, 3103
BstNI CCWGG 4 cut(s) 381, 506, 2706, 2938
BstNSI RCATGY 1 cut(s) 122
BstPAI GACNNNNGTC 1 cut(s) 629
BstSCI CCNGG 5 cut(s) 379, 504, 2362, 2704, 2936
BstSFI CTRYAG 1 cut(s) 3412
BstSLI GKGCMC 2 cut(s) 2380, 2526
BstSNI TACGTA 1 cut(s) 2993
BstUI CGCG 1 cut(s) 2848
BstV1I GCAGC 9 cut(s) 227, 732, 1119, 1454, 1976, 3036, 3117, 3614, 3912
BstV2I GAAGAC 4 cut(s) 1719, 1868, 3165, 3426
BstX2I RGATCY 1 cut(s) 3680
BstXI CCANNNNNNTGG 1 cut(s) 1453
BstYI RGATCY 1 cut(s) 3680
BsuI GTATCC 2 cut(s) 1005, 1793
BsuRI GGCC 2 cut(s) 254, 2658
BtsI GCAGTG 5 cut(s) 2333, 3209, 3234, 3614, 3811
BtsIMutI CAGTG 9 cut(s) 2333, 2920, 3108, 3209, 3234, 3239, 3287, 3614, 3811
BveI ACCTGC 1 cut(s) 1561
Cac8I GCNNGC 6 cut(s) 75, 1584, 1703, 2160, 3669, 3930
CaiI CAGNNNCTG 2 cut(s) 2335, 3613
CciI TCATGA 7 cut(s) 220, 660, 888, 1047, 1275, 1822, 3947
CfoI GCGC 4 cut(s) 1470, 1558, 2850, 3135
Cfr10I RCCGGY 1 cut(s) 2158
Cfr13I GGNCC 1 cut(s) 3873
CseI GACGC 1 cut(s) 2854
CsiI ACCWGGT 1 cut(s) 2936
Csp6I GTAC 9 cut(s) 384, 1173, 1433, 2590, 2874, 3481, 3847, 3891, 3923
CspCI CAANNNNNGTGG 2 cut(s) 3276, 3311
CviQI GTAC 9 cut(s) 384, 1173, 1433, 2590, 2874, 3481, 3847, 3891, 3923
DraI TTTAAA 3 cut(s) 921, 1474, 2196
DrdI GACNNNNNNGTC 1 cut(s) 3430
DseDI GACNNNNNNGTC 1 cut(s) 3430
EaeI YGGCCR 1 cut(s) 252
Eam1104I CTCTTC 6 cut(s) 445, 981, 1368, 2628, 3039, 3910
EarI CTCTTC 6 cut(s) 445, 981, 1368, 2628, 3039, 3910
Ecl136II GAGCTC 1 cut(s) 2450
Eco105I TACGTA 1 cut(s) 2993
Eco130I CCWWGG 4 cut(s) 123, 2791, 3493, 3560
Eco24I GRGCYC 1 cut(s) 2452
Eco32I GATATC 3 cut(s) 82, 761, 1148
Eco47I GGWCC 1 cut(s) 3873
Eco53kI GAGCTC 1 cut(s) 2450
Eco57I CTGAAG 5 cut(s) 810, 1197, 2312, 2486, 2652
Eco88I CYCGRG 1 cut(s) 3776
EcoICRI GAGCTC 1 cut(s) 2450
EcoRI GAATTC 1 cut(s) 1637
EcoRII CCWGG 4 cut(s) 379, 504, 2704, 2936
EcoRV GATATC 3 cut(s) 82, 761, 1148
EcoT14I CCWWGG 4 cut(s) 123, 2791, 3493, 3560
EcoT22I ATGCAT 1 cut(s) 2965
EcoT38I GRGCYC 1 cut(s) 2452
ErhI CCWWGG 4 cut(s) 123, 2791, 3493, 3560
FalI AAGNNNNNCTT 4 cut(s) 129, 161, 1104, 1136
FaqI GGGAC 6 cut(s) 101, 821, 1208, 1253, 2985, 3759
FauI CCCGC 4 cut(s) 585, 875, 1262, 3045
FauNDI CATATG 1 cut(s) 2882
FblI GTMKAC 1 cut(s) 3796
FriOI GRGCYC 1 cut(s) 2452
FspBI CTAG 7 cut(s) 417, 1688, 2381, 2687, 3165, 3323, 3731
FspI TGCGCA 1 cut(s) 3134
GlaI GCGC 4 cut(s) 1469, 1557, 2849, 3134
GsaI CCCAGC 2 cut(s) 949, 1336
GsuI CTGGAG 5 cut(s) 89, 2466, 3200, 3335, 3734
HaeIII GGCC 2 cut(s) 254, 2658
HapII CCGG 3 cut(s) 187, 2159, 2364
HgaI GACGC 1 cut(s) 2854
HhaI GCGC 4 cut(s) 1470, 1558, 2850, 3135
Hin6I GCGC 4 cut(s) 1468, 1556, 2848, 3133
HinP1I GCGC 4 cut(s) 1468, 1556, 2848, 3133
HincII GTYRAC 2 cut(s) 2985, 3009
HindII GTYRAC 2 cut(s) 2985, 3009
HindIII AAGCTT 3 cut(s) 71, 3200, 3665
HpaI GTTAAC 1 cut(s) 2985
HpaII CCGG 3 cut(s) 187, 2159, 2364
HphI GGTGA 6 cut(s) 12, 494, 1733, 3463, 3821, 3849
HpyAV CCTTC 7 cut(s) 88, 245, 1303, 1688, 3398, 3542, 3575
HpyCH4IV ACGT 4 cut(s) 9, 1777, 2992, 3602
HpyF10VI GCNNNNNNNGC 9 cut(s) 202, 224, 575, 745, 1132, 2447, 2636, 2847, 3103
HpySE526I ACGT 4 cut(s) 9, 1777, 2992, 3602
HspAI GCGC 4 cut(s) 1468, 1556, 2848, 3133
KroI GCCGGC 1 cut(s) 2158
KroNI GCCGGC 1 cut(s) 2160
KspAI GTTAAC 1 cut(s) 2985
LguI GCTCTTC 2 cut(s) 445, 3910
LmnI GCTCC 4 cut(s) 160, 1619, 2447, 3046
Lsp1109I GCAGC 9 cut(s) 227, 732, 1119, 1454, 1976, 3036, 3117, 3614, 3912
MabI ACCWGGT 1 cut(s) 2936
MaeI CTAG 7 cut(s) 417, 1688, 2381, 2687, 3165, 3323, 3731
MaeII ACGT 4 cut(s) 9, 1777, 2992, 3602
MbiI CCGCTC 3 cut(s) 592, 1908, 3466
MfeI CAATTG 3 cut(s) 1794, 2761, 3369
MflI RGATCY 1 cut(s) 3680
MhlI GDGCHC 3 cut(s) 2380, 2452, 2526
MmeI TCCRAC 3 cut(s) 625, 753, 1140
Mph1103I ATGCAT 1 cut(s) 2965
MroNI GCCGGC 1 cut(s) 2158
MroXI GAANNNNTTC 2 cut(s) 2781, 3120
MslI CAYNNNNRTG 4 cut(s) 507, 609, 3476, 3946
MspI CCGG 3 cut(s) 187, 2159, 2364
MspR9I CCNGG 5 cut(s) 381, 506, 2364, 2706, 2938
MunI CAATTG 3 cut(s) 1794, 2761, 3369
Mva1269I GAATGC 1 cut(s) 1607
MvaI CCWGG 4 cut(s) 381, 506, 2706, 2938
MvnI CGCG 1 cut(s) 2848
MwoI GCNNNNNNNGC 9 cut(s) 202, 224, 575, 745, 1132, 2447, 2636, 2847, 3103
NaeI GCCGGC 1 cut(s) 2160
NciI CCSGG 1 cut(s) 2364
NdeI CATATG 1 cut(s) 2882
NgoMIV GCCGGC 1 cut(s) 2158
NmeAIII GCCGAG 1 cut(s) 1096
NmuCI GTSAC 6 cut(s) 500, 713, 1100, 2842, 3318, 3332
NsbI TGCGCA 1 cut(s) 3134
NsiI ATGCAT 1 cut(s) 2965
NspI RCATGY 1 cut(s) 122
NspV TTCGAA 1 cut(s) 3535
PagI TCATGA 7 cut(s) 220, 660, 888, 1047, 1275, 1822, 3947
PciSI GCTCTTC 2 cut(s) 445, 3910
PctI GAATGC 1 cut(s) 1607
PdiI GCCGGC 1 cut(s) 2160
PdmI GAANNNNTTC 2 cut(s) 2781, 3120
PfeI GAWTC 7 cut(s) 1853, 2173, 2359, 2392, 2709, 2797, 3569
PflFI GACNNNGTC 1 cut(s) 308
PflMI CCANNNNNTGG 3 cut(s) 2792, 3261, 3494
PfoI TCCNGGA 1 cut(s) 2704
Ppu21I YACGTR 2 cut(s) 1778, 2993
PshAI GACNNNNGTC 1 cut(s) 629
PsiI TTATAA 1 cut(s) 1923
Psp124BI GAGCTC 1 cut(s) 2452
Psp6I CCWGG 4 cut(s) 379, 504, 2704, 2936
PspFI CCCAGC 2 cut(s) 945, 1332
PspGI CCWGG 4 cut(s) 379, 504, 2704, 2936
PspPI GGNCC 1 cut(s) 3873
PstI CTGCAG 1 cut(s) 3416
PstNI CAGNNNCTG 2 cut(s) 2335, 3613
PsuI RGATCY 1 cut(s) 3680
PsyI GACNNNGTC 1 cut(s) 308
RsaI GTAC 9 cut(s) 385, 1174, 1434, 2591, 2875, 3482, 3848, 3892, 3924
RsaNI GTAC 9 cut(s) 384, 1173, 1433, 2590, 2874, 3481, 3847, 3891, 3923
RseI CAYNNNNRTG 4 cut(s) 507, 609, 3476, 3946
SacI GAGCTC 1 cut(s) 2452
SapI GCTCTTC 2 cut(s) 445, 3910
Sau96I GGNCC 1 cut(s) 3873
ScrFI CCNGG 5 cut(s) 381, 506, 2364, 2706, 2938
SduI GDGCHC 3 cut(s) 2380, 2452, 2526
SexAI ACCWGGT 1 cut(s) 2936
SfcI CTRYAG 1 cut(s) 3412
SfuI TTCGAA 1 cut(s) 3535
SinI GGWCC 1 cut(s) 3873
SmiMI CAYNNNNRTG 4 cut(s) 507, 609, 3476, 3946
SmlI CTYRAG 6 cut(s) 206, 2810, 2974, 3461, 3550, 3782
SmoI CTYRAG 6 cut(s) 206, 2810, 2974, 3461, 3550, 3782
SnaBI TACGTA 1 cut(s) 2993
SspI AATATT 3 cut(s) 2413, 2482, 2544
SspMI CTAG 7 cut(s) 417, 1688, 2381, 2687, 3165, 3323, 3731
SstI GAGCTC 1 cut(s) 2452
StyD4I CCNGG 5 cut(s) 379, 504, 2362, 2704, 2936
StyI CCWWGG 4 cut(s) 123, 2791, 3493, 3560
TaiI ACGT 4 cut(s) 12, 1780, 2995, 3605
TaqI TCGA 8 cut(s) 373, 730, 1594, 2127, 2942, 3353, 3437, 3535
TatI WGTACW 6 cut(s) 1172, 2873, 3480, 3846, 3890, 3922
TauI GCSGC 1 cut(s) 1908
TfiI GAWTC 7 cut(s) 1853, 2173, 2359, 2392, 2709, 2797, 3569
TscAI CASTG 9 cut(s) 2340, 2920, 3108, 3216, 3241, 3246, 3294, 3614, 3811
TseFI GTSAC 6 cut(s) 500, 713, 1100, 2842, 3318, 3332
TseI GCWGC 9 cut(s) 215, 745, 1132, 1442, 1964, 3049, 3130, 3627, 3900
Tsp45I GTSAC 6 cut(s) 500, 713, 1100, 2842, 3318, 3332
TspGWI ACGGA 1 cut(s) 1846
TspRI CASTG 9 cut(s) 2340, 2920, 3108, 3216, 3241, 3246, 3294, 3614, 3811
Tth111I GACNNNGTC 1 cut(s) 308
Van91I CCANNNNNTGG 3 cut(s) 2792, 3261, 3494
VneI GTGCAC 1 cut(s) 2376
VpaK11BI GGWCC 1 cut(s) 3873
XapI RAATTY 6 cut(s) 1545, 1637, 1899, 2386, 2646, 3634
XbaI TCTAGA 2 cut(s) 1687, 3730
XceI RCATGY 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 3796
XmnI GAANNNNTTC 2 cut(s) 2781, 3120
XspI CTAG 7 cut(s) 417, 1688, 2381, 2687, 3165, 3323, 3731
Zsp2I ATGCAT 1 cut(s) 2965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.