Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 91 | 1.2e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 226 - 396 | 1.3e-37 | NB-ARC domain |
| WHD_DRP | PF23559 | 482 - 555 | 5.5e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 620 - 902 | 3.3e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 740 - 875 | 1.3e-21 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 934 - 1067 | 9.4e-07 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 1060 - 1210 | 1.7e-06 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2462, 3371 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3578 |
| AatII | GACGTC | 1 cut(s) | 216 |
| Acc16I | TGCGCA | 1 cut(s) | 266 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2623, 2811 |
| AccBSI | CCGCTC | 1 cut(s) | 454 |
| AccI | GTMKAC | 3 cut(s) | 795, 1242, 3532 |
| AccII | CGCG | 1 cut(s) | 633 |
| AciI | CCGC | 7 cut(s) | 23, 140, 454, 1053, 1094, 1844, 1954 |
| AclWI | GGATC | 9 cut(s) | 797, 881, 1004, 1017, 1477, 1768, 1912, 2599, 3664 |
| AcsI | RAATTY | 7 cut(s) | 287, 499, 1371, 1631, 1894, 2651, 3403 |
| AcuI | CTGAAG | 3 cut(s) | 750, 1515, 1800 |
| AcyI | GRCGYC | 2 cut(s) | 213, 1257 |
| AfaI | GTAC | 3 cut(s) | 30, 2074, 3107 |
| AfeI | AGCGCT | 1 cut(s) | 3593 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 1046, 1090, 1520, 2146, 2582, 2623, 2811, 3170 |
| AflII | CTTAAG | 1 cut(s) | 1384 |
| AflIII | ACRYGT | 5 cut(s) | 368, 1324, 1733, 3394, 3649 |
| AgeI | ACCGGT | 1 cut(s) | 127 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 647 |
| AjiI | CACGTC | 1 cut(s) | 2299 |
| AjnI | CCWGG | 1 cut(s) | 2495 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2059, 2091 |
| AleI | CACNNNNGTG | 4 cut(s) | 434, 1227, 2643, 2750 |
| Alw21I | GWGCWC | 7 cut(s) | 39, 324, 990, 1716, 2055, 2640, 3191 |
| Alw44I | GTGCAC | 2 cut(s) | 1712, 2636 |
| AlwI | GGATC | 9 cut(s) | 797, 881, 1004, 1017, 1477, 1768, 1912, 2599, 3664 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2029 |
| Aor51HI | AGCGCT | 1 cut(s) | 3593 |
| AoxI | GGCC | 4 cut(s) | 1538, 2191, 2390, 2519 |
| ApaLI | GTGCAC | 2 cut(s) | 1712, 2636 |
| ApoI | RAATTY | 7 cut(s) | 287, 499, 1371, 1631, 1894, 2651, 3403 |
| AseI | ATTAAT | 3 cut(s) | 1467, 1653, 2550 |
| AsiGI | ACCGGT | 1 cut(s) | 127 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 1166, 1528, 1851, 2571, 2626 |
| AspLEI | GCGC | 2 cut(s) | 267, 3594 |
| AspS9I | GGNCC | 3 cut(s) | 641, 725, 2192 |
| AsuC2I | CCSGG | 2 cut(s) | 1084, 2196 |
| AsuHPI | GGTGA | 7 cut(s) | 142, 154, 196, 448, 1241, 2672, 3623 |
| AvaII | GGWCC | 2 cut(s) | 641, 725 |
| BaeGI | GKGCMC | 2 cut(s) | 1716, 2640 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3089, 3122 |
| BamHI | GGATCC | 1 cut(s) | 1009 |
| BanII | GRGCYC | 3 cut(s) | 324, 2055, 3552 |
| BbsI | GAAGAC | 2 cut(s) | 705, 2564 |
| Bbv12I | GWGCWC | 7 cut(s) | 39, 324, 990, 1716, 2055, 2640, 3191 |
| BbvCI | CCTCAGC | 1 cut(s) | 2840 |
| BccI | CCATC | 6 cut(s) | 760, 1184, 1494, 2149, 2354, 3060 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 343, 377 |
| BciT130I | CCWGG | 1 cut(s) | 2497 |
| BclI | TGATCA | 1 cut(s) | 1645 |
| BcnI | CCSGG | 2 cut(s) | 1084, 2196 |
| BfaI | CTAG | 9 cut(s) | 257, 576, 1110, 1343, 1697, 1761, 1865, 1982, 3147 |
| BfmI | CTRYAG | 1 cut(s) | 1717 |
| BfoI | RGCGCY | 1 cut(s) | 3595 |
| BfrI | CTTAAG | 1 cut(s) | 1384 |
| BglII | AGATCT | 2 cut(s) | 333, 2971 |
| Bme1390I | CCNGG | 3 cut(s) | 1084, 2196, 2497 |
| Bme18I | GGWCC | 2 cut(s) | 641, 725 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 647 |
| BmgBI | CACGTC | 1 cut(s) | 2299 |
| BmgT120I | GGNCC | 3 cut(s) | 641, 725, 2192 |
| BmiI | GGNNCC | 8 cut(s) | 643, 1011, 1051, 1137, 2194, 2494, 2501, 3551 |
| BmrFI | CCNGG | 3 cut(s) | 1084, 2196, 2497 |
| BmrI | ACTGGG | 1 cut(s) | 974 |
| BmuI | ACTGGG | 1 cut(s) | 974 |
| BpiI | GAAGAC | 2 cut(s) | 705, 2564 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2506, 2538 |
| BpmI | CTGGAG | 3 cut(s) | 1929, 2288, 3140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2840 |
| BpuEI | CTTGAG | 5 cut(s) | 2023, 2039, 2585, 3287, 3605 |
| BpuMI | CCSGG | 2 cut(s) | 1084, 2196 |
| BsaAI | YACGTR | 1 cut(s) | 371 |
| BsaHI | GRCGYC | 2 cut(s) | 213, 1257 |
| BsaJI | CCNNGG | 5 cut(s) | 564, 806, 2194, 2617, 2810 |
| BsaWI | WCCGGW | 1 cut(s) | 127 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2437, 2467 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 1046, 1090, 1520, 2146, 2582, 2623, 2811, 3170 |
| Bse118I | RCCGGY | 1 cut(s) | 127 |
| Bse1I | ACTGG | 9 cut(s) | 583, 643, 717, 969, 2177, 3123, 3380, 3613, 3623 |
| Bse3DI | GCAATG | 4 cut(s) | 947, 1561, 2235, 3684 |
| BseBI | CCWGG | 1 cut(s) | 2497 |
| BseDI | CCNNGG | 5 cut(s) | 564, 806, 2194, 2617, 2810 |
| BseGI | GGATG | 8 cut(s) | 559, 688, 708, 771, 2319, 2613, 3071, 3689 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 1046, 1090, 1520, 2146, 2582, 2623, 2811, 3170 |
| BseMI | GCAATG | 4 cut(s) | 947, 1561, 2235, 3684 |
| BseNI | ACTGG | 9 cut(s) | 583, 643, 717, 969, 2177, 3123, 3380, 3613, 3623 |
| BseRI | GAGGAG | 2 cut(s) | 173, 2285 |
| BseSI | GKGCMC | 2 cut(s) | 1716, 2640 |
| BseYI | CCCAGC | 1 cut(s) | 865 |
| BsgI | GTGCAG | 5 cut(s) | 1205, 1277, 2873, 3487, 3689 |
| Bsh1236I | CGCG | 1 cut(s) | 633 |
| Bsh1285I | CGRYCG | 1 cut(s) | 419 |
| BshFI | GGCC | 4 cut(s) | 1540, 2193, 2392, 2521 |
| BshTI | ACCGGT | 1 cut(s) | 127 |
| BsiEI | CGRYCG | 1 cut(s) | 419 |
| BsiHKAI | GWGCWC | 7 cut(s) | 39, 324, 990, 1716, 2055, 2640, 3191 |
| BsiSI | CCGG | 4 cut(s) | 128, 1084, 1677, 2196 |
| BslFI | GGGAC | 2 cut(s) | 1244, 3399 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 1046, 1090, 1520, 2146, 2582, 2623, 2811, 3170 |
| BsmBI | CGTCTC | 3 cut(s) | 113, 622, 1979 |
| BsmFI | GGGAC | 2 cut(s) | 1244, 3399 |
| BsmI | GAATGC | 2 cut(s) | 1893, 2139 |
| BsnI | GGCC | 4 cut(s) | 1540, 2193, 2392, 2521 |
| Bsp1286I | GDGCHC | 8 cut(s) | 39, 324, 990, 1716, 2055, 2640, 3191, 3552 |
| Bsp19I | CCATGG | 1 cut(s) | 2810 |
| BspACI | CCGC | 7 cut(s) | 23, 140, 454, 1053, 1094, 1844, 1954 |
| BspANI | GGCC | 4 cut(s) | 1540, 2193, 2392, 2521 |
| BspFNI | CGCG | 1 cut(s) | 633 |
| BspLI | GGNNCC | 8 cut(s) | 643, 1011, 1051, 1137, 2194, 2494, 2501, 3551 |
| BspPI | GGATC | 9 cut(s) | 797, 881, 1004, 1017, 1477, 1768, 1912, 2599, 3664 |
| BspTI | CTTAAG | 1 cut(s) | 1384 |
| BsrBI | CCGCTC | 1 cut(s) | 454 |
| BsrDI | GCAATG | 4 cut(s) | 947, 1561, 2235, 3684 |
| BsrFI | RCCGGY | 1 cut(s) | 127 |
| BsrI | ACTGG | 9 cut(s) | 583, 643, 717, 969, 2177, 3123, 3380, 3613, 3623 |
| BssAI | RCCGGY | 1 cut(s) | 127 |
| BssECI | CCNNGG | 5 cut(s) | 564, 806, 2194, 2617, 2810 |
| BssNI | GRCGYC | 2 cut(s) | 213, 1257 |
| BssT1I | CCWWGG | 3 cut(s) | 564, 2617, 2810 |
| Bst2UI | CCWGG | 1 cut(s) | 2497 |
| Bst6I | CTCTTC | 3 cut(s) | 672, 1146, 1534 |
| BstACI | GRCGYC | 2 cut(s) | 213, 1257 |
| BstAFI | CTTAAG | 1 cut(s) | 1384 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 224 |
| BstBAI | YACGTR | 1 cut(s) | 371 |
| BstDSI | CCRYGG | 1 cut(s) | 2810 |
| BstF5I | GGATG | 8 cut(s) | 559, 688, 708, 771, 2319, 2613, 3071, 3689 |
| BstFNI | CGCG | 1 cut(s) | 633 |
| BstH2I | RGCGCY | 1 cut(s) | 3595 |
| BstHHI | GCGC | 2 cut(s) | 267, 3594 |
| BstMCI | CGRYCG | 1 cut(s) | 419 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 202, 224, 1100, 1430, 1761, 3180, 3600, 3676 |
| BstNI | CCWGG | 1 cut(s) | 2497 |
| BstNSI | RCATGY | 5 cut(s) | 1291, 1328, 1737, 3398, 3653 |
| BstSCI | CCNGG | 3 cut(s) | 1082, 2194, 2495 |
| BstSFI | CTRYAG | 1 cut(s) | 1717 |
| BstSLI | GKGCMC | 2 cut(s) | 1716, 2640 |
| BstUI | CGCG | 1 cut(s) | 633 |
| BstV2I | GAAGAC | 2 cut(s) | 705, 2564 |
| BstX2I | RGATCY | 5 cut(s) | 333, 1009, 1904, 2604, 2971 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1020 |
| BstYI | RGATCY | 5 cut(s) | 333, 1009, 1904, 2604, 2971 |
| BsuRI | GGCC | 4 cut(s) | 1540, 2193, 2392, 2521 |
| BtgI | CCRYGG | 1 cut(s) | 2810 |
| BtrI | CACGTC | 1 cut(s) | 2299 |
| BtsCI | GGATG | 8 cut(s) | 559, 688, 708, 771, 2319, 2613, 3071, 3689 |
| BtsI | GCAGTG | 2 cut(s) | 3039, 3672 |
| BtsIMutI | CAGTG | 8 cut(s) | 57, 342, 1906, 2927, 3039, 3116, 3387, 3672 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2029 |
| CfoI | GCGC | 2 cut(s) | 267, 3594 |
| Cfr10I | RCCGGY | 1 cut(s) | 127 |
| Cfr13I | GGNCC | 3 cut(s) | 641, 725, 2192 |
| CseI | GACGC | 3 cut(s) | 639, 1246, 1731 |
| CsiI | ACCWGGT | 1 cut(s) | 2495 |
| Csp6I | GTAC | 3 cut(s) | 29, 2073, 3106 |
| CspAI | ACCGGT | 1 cut(s) | 127 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 46, 81 |
| CviQI | GTAC | 3 cut(s) | 29, 2073, 3106 |
| DraI | TTTAAA | 3 cut(s) | 1636, 1876, 3291 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3578 |
| DriI | GACNNNNNGTC | 1 cut(s) | 647 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3578 |
| Eam1104I | CTCTTC | 3 cut(s) | 672, 1146, 1534 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 647 |
| EarI | CTCTTC | 3 cut(s) | 672, 1146, 1534 |
| Ecl136II | GAGCTC | 2 cut(s) | 322, 2053 |
| Eco130I | CCWWGG | 3 cut(s) | 564, 2617, 2810 |
| Eco24I | GRGCYC | 3 cut(s) | 324, 2055, 3552 |
| Eco32I | GATATC | 2 cut(s) | 2979, 3630 |
| Eco47I | GGWCC | 2 cut(s) | 641, 725 |
| Eco47III | AGCGCT | 1 cut(s) | 3593 |
| Eco53kI | GAGCTC | 2 cut(s) | 322, 2053 |
| Eco57I | CTGAAG | 3 cut(s) | 750, 1515, 1800 |
| EcoICRI | GAGCTC | 2 cut(s) | 322, 2053 |
| EcoRI | GAATTC | 3 cut(s) | 499, 1371, 2651 |
| EcoRII | CCWGG | 1 cut(s) | 2495 |
| EcoRV | GATATC | 2 cut(s) | 2979, 3630 |
| EcoT14I | CCWWGG | 3 cut(s) | 564, 2617, 2810 |
| EcoT22I | ATGCAT | 1 cut(s) | 1644 |
| EcoT38I | GRGCYC | 3 cut(s) | 324, 2055, 3552 |
| ErhI | CCWWGG | 3 cut(s) | 564, 2617, 2810 |
| Esp3I | CGTCTC | 3 cut(s) | 113, 622, 1979 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2059, 2091 |
| FaqI | GGGAC | 2 cut(s) | 1244, 3399 |
| FbaI | TGATCA | 1 cut(s) | 1645 |
| FblI | GTMKAC | 3 cut(s) | 795, 1242, 3532 |
| FokI | GGATG | 8 cut(s) | 566, 695, 715, 778, 2326, 2600, 3078, 3676 |
| FriOI | GRGCYC | 3 cut(s) | 324, 2055, 3552 |
| FspBI | CTAG | 9 cut(s) | 257, 576, 1110, 1343, 1697, 1761, 1865, 1982, 3147 |
| FspI | TGCGCA | 1 cut(s) | 266 |
| GlaI | GCGC | 2 cut(s) | 266, 3593 |
| GsaI | CCCAGC | 1 cut(s) | 869 |
| GsuI | CTGGAG | 3 cut(s) | 1929, 2288, 3140 |
| HaeII | RGCGCY | 1 cut(s) | 3595 |
| HaeIII | GGCC | 4 cut(s) | 1540, 2193, 2392, 2521 |
| HapII | CCGG | 4 cut(s) | 128, 1084, 1677, 2196 |
| HgaI | GACGC | 3 cut(s) | 639, 1246, 1731 |
| HhaI | GCGC | 2 cut(s) | 267, 3594 |
| Hin1I | GRCGYC | 2 cut(s) | 213, 1257 |
| Hin6I | GCGC | 2 cut(s) | 265, 3592 |
| HinP1I | GCGC | 2 cut(s) | 265, 3592 |
| HincII | GTYRAC | 3 cut(s) | 51, 71, 2588 |
| HindII | GTYRAC | 3 cut(s) | 51, 71, 2588 |
| HindIII | AAGCTT | 2 cut(s) | 1213, 1422 |
| HpaII | CCGG | 4 cut(s) | 128, 1084, 1677, 2196 |
| HphI | GGTGA | 7 cut(s) | 142, 154, 196, 448, 1241, 2672, 3623 |
| Hpy99I | CGWCG | 3 cut(s) | 218, 2192, 2300 |
| HpyAV | CCTTC | 6 cut(s) | 39, 427, 1419, 2657, 3164, 3173 |
| HpyCH4IV | ACGT | 4 cut(s) | 122, 213, 370, 2298 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 202, 224, 1100, 1430, 1761, 3180, 3600, 3676 |
| HpySE526I | ACGT | 4 cut(s) | 122, 213, 370, 2298 |
| Hsp92I | GRCGYC | 2 cut(s) | 213, 1257 |
| HspAI | GCGC | 2 cut(s) | 265, 3592 |
| Ksp22I | TGATCA | 1 cut(s) | 1645 |
| LmnI | GCTCC | 5 cut(s) | 160, 319, 1055, 3463, 3555 |
| MabI | ACCWGGT | 1 cut(s) | 2495 |
| MaeI | CTAG | 9 cut(s) | 257, 576, 1110, 1343, 1697, 1761, 1865, 1982, 3147 |
| MaeII | ACGT | 4 cut(s) | 122, 213, 370, 2298 |
| MbiI | CCGCTC | 1 cut(s) | 454 |
| MfeI | CAATTG | 2 cut(s) | 947, 3207 |
| MflI | RGATCY | 5 cut(s) | 333, 1009, 1904, 2604, 2971 |
| MhlI | GDGCHC | 8 cut(s) | 39, 324, 990, 1716, 2055, 2640, 3191, 3552 |
| MlyI | GAGTC | 6 cut(s) | 14, 665, 911, 1687, 1927, 2912 |
| MmeI | TCCRAC | 5 cut(s) | 739, 880, 1880, 3577, 3634 |
| Mph1103I | ATGCAT | 1 cut(s) | 1644 |
| MroXI | GAANNNNTTC | 5 cut(s) | 1166, 1528, 1851, 2571, 2626 |
| MslI | CAYNNNNRTG | 6 cut(s) | 434, 1227, 1653, 2643, 2750, 3281 |
| MspA1I | CMGCKG | 3 cut(s) | 25, 1055, 2396 |
| MspCI | CTTAAG | 1 cut(s) | 1384 |
| MspI | CCGG | 4 cut(s) | 128, 1084, 1677, 2196 |
| MspR9I | CCNGG | 3 cut(s) | 1084, 2196, 2497 |
| MunI | CAATTG | 2 cut(s) | 947, 3207 |
| Mva1269I | GAATGC | 2 cut(s) | 1893, 2139 |
| MvaI | CCWGG | 1 cut(s) | 2497 |
| MvnI | CGCG | 1 cut(s) | 633 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 202, 224, 1100, 1430, 1761, 3180, 3600, 3676 |
| NciI | CCSGG | 2 cut(s) | 1084, 2196 |
| NcoI | CCATGG | 1 cut(s) | 2810 |
| NlaIV | GGNNCC | 8 cut(s) | 643, 1011, 1051, 1137, 2194, 2494, 2501, 3551 |
| NmuCI | GTSAC | 4 cut(s) | 364, 519, 2858, 3071 |
| NsbI | TGCGCA | 1 cut(s) | 266 |
| NsiI | ATGCAT | 1 cut(s) | 1644 |
| NspI | RCATGY | 5 cut(s) | 1291, 1328, 1737, 3398, 3653 |
| OliI | CACNNNNGTG | 4 cut(s) | 434, 1227, 2643, 2750 |
| PaeI | GCATGC | 1 cut(s) | 1291 |
| PciI | ACATGT | 4 cut(s) | 1324, 1733, 3394, 3649 |
| PctI | GAATGC | 2 cut(s) | 1893, 2139 |
| PdmI | GAANNNNTTC | 5 cut(s) | 1166, 1528, 1851, 2571, 2626 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2623, 2811 |
| PinAI | ACCGGT | 1 cut(s) | 127 |
| PleI | GAGTC | 6 cut(s) | 13, 664, 911, 1687, 1926, 2912 |
| PpsI | GAGTC | 6 cut(s) | 13, 664, 911, 1687, 1926, 2912 |
| Ppu21I | YACGTR | 1 cut(s) | 371 |
| PscI | ACATGT | 4 cut(s) | 1324, 1733, 3394, 3649 |
| PshBI | ATTAAT | 3 cut(s) | 1467, 1653, 2550 |
| PsiI | TTATAA | 2 cut(s) | 2462, 3371 |
| Psp124BI | GAGCTC | 2 cut(s) | 324, 2055 |
| Psp6I | CCWGG | 1 cut(s) | 2495 |
| PspFI | CCCAGC | 1 cut(s) | 865 |
| PspGI | CCWGG | 1 cut(s) | 2495 |
| PspN4I | GGNNCC | 8 cut(s) | 643, 1011, 1051, 1137, 2194, 2494, 2501, 3551 |
| PspPI | GGNCC | 3 cut(s) | 641, 725, 2192 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2029 |
| PsuI | RGATCY | 5 cut(s) | 333, 1009, 1904, 2604, 2971 |
| PvuII | CAGCTG | 1 cut(s) | 2396 |
| RsaI | GTAC | 3 cut(s) | 30, 2074, 3107 |
| RsaNI | GTAC | 3 cut(s) | 29, 2073, 3106 |
| RseI | CAYNNNNRTG | 6 cut(s) | 434, 1227, 1653, 2643, 2750, 3281 |
| SacI | GAGCTC | 2 cut(s) | 324, 2055 |
| Sau96I | GGNCC | 3 cut(s) | 641, 725, 2192 |
| SchI | GAGTC | 6 cut(s) | 14, 665, 911, 1687, 1927, 2912 |
| ScrFI | CCNGG | 3 cut(s) | 1084, 2196, 2497 |
| SduI | GDGCHC | 8 cut(s) | 39, 324, 990, 1716, 2055, 2640, 3191, 3552 |
| SexAI | ACCWGGT | 1 cut(s) | 2495 |
| SfcI | CTRYAG | 1 cut(s) | 1717 |
| SinI | GGWCC | 2 cut(s) | 641, 725 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 434, 1227, 1653, 2643, 2750, 3281 |
| SmlI | CTYRAG | 6 cut(s) | 1384, 2038, 2054, 2600, 3266, 3584 |
| SmoI | CTYRAG | 6 cut(s) | 1384, 2038, 2054, 2600, 3266, 3584 |
| SphI | GCATGC | 1 cut(s) | 1291 |
| SsiI | CCGC | 7 cut(s) | 23, 140, 454, 1053, 1094, 1844, 1954 |
| SspI | AATATT | 1 cut(s) | 1276 |
| SspMI | CTAG | 9 cut(s) | 257, 576, 1110, 1343, 1697, 1761, 1865, 1982, 3147 |
| SstI | GAGCTC | 2 cut(s) | 324, 2055 |
| StyD4I | CCNGG | 3 cut(s) | 1082, 2194, 2495 |
| StyI | CCWWGG | 3 cut(s) | 564, 2617, 2810 |
| TaiI | ACGT | 4 cut(s) | 125, 216, 373, 2301 |
| TaqI | TCGA | 7 cut(s) | 105, 419, 497, 990, 2373, 2649, 3481 |
| TaqII | GACCGA | 2 cut(s) | 2573, 3186 |
| TscAI | CASTG | 8 cut(s) | 64, 349, 1906, 2934, 3046, 3123, 3387, 3672 |
| TseFI | GTSAC | 4 cut(s) | 364, 519, 2858, 3071 |
| Tsp45I | GTSAC | 4 cut(s) | 364, 519, 2858, 3071 |
| TspGWI | ACGGA | 1 cut(s) | 113 |
| TspRI | CASTG | 8 cut(s) | 64, 349, 1906, 2934, 3046, 3123, 3387, 3672 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2623, 2811 |
| Vha464I | CTTAAG | 1 cut(s) | 1384 |
| VneI | GTGCAC | 2 cut(s) | 1712, 2636 |
| VpaK11BI | GGWCC | 2 cut(s) | 641, 725 |
| VspI | ATTAAT | 3 cut(s) | 1467, 1653, 2550 |
| XapI | RAATTY | 7 cut(s) | 287, 499, 1371, 1631, 1894, 2651, 3403 |
| XceI | RCATGY | 5 cut(s) | 1291, 1328, 1737, 3398, 3653 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1931 |
| XmiI | GTMKAC | 3 cut(s) | 795, 1242, 3532 |
| XmnI | GAANNNNTTC | 5 cut(s) | 1166, 1528, 1851, 2571, 2626 |
| XspI | CTAG | 9 cut(s) | 257, 576, 1110, 1343, 1697, 1761, 1865, 1982, 3147 |
| ZraI | GACGTC | 1 cut(s) | 214 |
| Zsp2I | ATGCAT | 1 cut(s) | 1644 |